View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14629_high_37 (Length: 217)
Name: NF14629_high_37
Description: NF14629
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14629_high_37 |
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Alignment Details
Target: chr5 (Bit Score: 117; Significance: 9e-60; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 9830037 - 9830249
Alignment:
| Q |
1 |
tgtcttttgtattttttgttagatgttgggttcgtcgtaacttactttaattgtgtaatnnnnnnnnttacacaagtttgataatttagttgatctcnnn |
100 |
Q |
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| T |
9830037 |
tgtcttttgtattttttgttagatgttgggttcgttgtaacttactttaattgtgtaataaaaaaaattacacatgtttgataatttagttgatctcttt |
9830136 |
T |
|
| Q |
101 |
nnnnattactaatttgttnnnnnnnnnnnnnttgaggcaagtggtttagtttttcttttgtaaaacttttaatatcagctttgtaatcataaaaattaat |
200 |
Q |
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|||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9830137 |
ttttattactaatttgttaaaaaaacaaaaattgaggcaagtggattagtttttcttttgtaaaacttttaatatcagctttgtaatcataaaaattaat |
9830236 |
T |
|
| Q |
201 |
gctttaattattc |
213 |
Q |
| |
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||||||||||||| |
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| T |
9830237 |
gctttaattattc |
9830249 |
T |
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