View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14629_low_26 (Length: 296)
Name: NF14629_low_26
Description: NF14629
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14629_low_26 |
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Alignment Details
Target: chr5 (Bit Score: 268; Significance: 1e-149; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 19 - 290
Target Start/End: Original strand, 2348326 - 2348597
Alignment:
| Q |
19 |
cataagcttctctctccccaagaaaatgcctcagagcaaaactttgtcctaaccattgaatttccttaaattccttcccccttcccaatcttctcctcac |
118 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2348326 |
cataagcttctctctccccaagaaaatgcctcagagcaaaactttgtcctaaccattgaatttccttaaattccttcccccttcccaatcttctcctcac |
2348425 |
T |
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| Q |
119 |
ttggtaatctttggatcctaacaacacaccaattggccacaatactttatcattactgtttttgtgattagttttatctgaattaccattcatcaatttc |
218 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2348426 |
ttggtaatctttggatcctaacaaaacaccaattggccacaatactttatcattactgtttttgtgattagttttatctgaattaccattcatcaatttc |
2348525 |
T |
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| Q |
219 |
ttcaacaacatatctgcaaaatgttgatcattctttgaataagtgagtttggaagaaccttttttctctctg |
290 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2348526 |
ttcaacaacatatctgcaaaatgttgatcattctttgaataagtgagtttggaagaaccttttttctctctg |
2348597 |
T |
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