View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14629_low_5 (Length: 513)

Name: NF14629_low_5
Description: NF14629
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14629_low_5
NF14629_low_5
[»] chr4 (34 HSPs)
chr4 (38-498)||(38542853-38543313)
chr4 (1-37)||(56001356-56001392)
chr4 (1-35)||(15445430-15445464)
chr4 (1-35)||(26428650-26428684)
chr4 (1-35)||(29834520-29834554)
chr4 (1-35)||(44655715-44655749)
chr4 (1-34)||(3528192-3528225)
chr4 (1-34)||(15446758-15446791)
chr4 (1-34)||(29833367-29833400)
chr4 (1-34)||(30672152-30672185)
chr4 (1-34)||(53401539-53401572)
chr4 (1-36)||(15317695-15317730)
chr4 (1-40)||(26393215-26393254)
chr4 (1-36)||(28370729-28370764)
chr4 (1-36)||(52658904-52658939)
chr4 (1-31)||(2310870-2310900)
chr4 (1-31)||(23203050-23203080)
chr4 (1-34)||(937186-937219)
chr4 (1-34)||(8516940-8516973)
chr4 (1-34)||(12396962-12396995)
chr4 (1-34)||(15317915-15317948)
chr4 (1-34)||(19048899-19048932)
chr4 (1-34)||(23202235-23202268)
chr4 (1-34)||(23202831-23202864)
chr4 (1-34)||(26202474-26202507)
chr4 (1-34)||(28189385-28189418)
chr4 (1-34)||(28509961-28509994)
chr4 (1-38)||(39135598-39135635)
chr4 (1-34)||(44664414-44664447)
chr4 (1-34)||(52880808-52880841)
chr4 (1-34)||(53177106-53177139)
chr4 (1-34)||(53400180-53400213)
chr4 (1-34)||(56000282-56000315)
chr4 (1-34)||(56297767-56297800)
[»] chr7 (47 HSPs)
chr7 (1-40)||(18668752-18668791)
chr7 (1-36)||(7345907-7345942)
chr7 (1-40)||(34557386-34557425)
chr7 (1-35)||(36702771-36702805)
chr7 (1-39)||(38778967-38779005)
chr7 (1-35)||(41616618-41616652)
chr7 (1-35)||(43704602-43704636)
chr7 (1-34)||(1884235-1884268)
chr7 (1-34)||(1885329-1885362)
chr7 (1-34)||(6772723-6772756)
chr7 (1-34)||(10338182-10338215)
chr7 (1-34)||(10338401-10338434)
chr7 (1-34)||(18801210-18801243)
chr7 (1-34)||(21171290-21171323)
chr7 (1-34)||(32610679-32610712)
chr7 (1-34)||(33228842-33228875)
chr7 (1-34)||(35480203-35480236)
chr7 (1-34)||(36673924-36673957)
chr7 (1-34)||(37373529-37373562)
chr7 (1-34)||(40501228-40501261)
chr7 (1-34)||(41126234-41126267)
chr7 (1-34)||(43705461-43705494)
chr7 (1-33)||(41618587-41618619)
chr7 (1-32)||(30224064-30224095)
chr7 (1-32)||(34558389-34558420)
chr7 (1-32)||(48755636-48755667)
chr7 (2-40)||(1903819-1903857)
chr7 (1-31)||(1904108-1904138)
chr7 (4-34)||(7347311-7347341)
chr7 (1-31)||(21171574-21171604)
chr7 (1-39)||(33229621-33229659)
chr7 (1-35)||(35088050-35088084)
chr7 (1-31)||(37725877-37725907)
chr7 (1-31)||(38001502-38001532)
chr7 (1-35)||(38002602-38002636)
chr7 (1-34)||(2904135-2904168)
chr7 (1-34)||(6773478-6773511)
chr7 (1-34)||(8439761-8439794)
chr7 (1-34)||(18670591-18670624)
chr7 (1-38)||(22744737-22744774)
chr7 (1-34)||(29754774-29754807)
chr7 (1-34)||(40501543-40501576)
chr7 (1-34)||(41127259-41127292)
chr7 (1-34)||(43705630-43705663)
chr7 (1-34)||(47809485-47809518)
chr7 (1-34)||(47810227-47810260)
chr7 (1-41)||(43006373-43006413)
[»] chr6 (20 HSPs)
chr6 (1-40)||(19368606-19368645)
chr6 (1-37)||(5999671-5999707)
chr6 (1-36)||(13173030-13173065)
chr6 (1-39)||(12203359-12203397)
chr6 (1-35)||(19655066-19655100)
chr6 (1-34)||(12202380-12202413)
chr6 (1-34)||(21749890-21749923)
chr6 (1-40)||(8412404-8412443)
chr6 (1-36)||(17916557-17916592)
chr6 (1-40)||(22298593-22298632)
chr6 (1-40)||(26581942-26581981)
chr6 (1-32)||(28225421-28225452)
chr6 (4-34)||(8224429-8224459)
chr6 (1-39)||(12202187-12202225)
chr6 (1-35)||(19367711-19367745)
chr6 (1-31)||(33328373-33328403)
chr6 (1-34)||(11104465-11104498)
chr6 (1-42)||(17915696-17915737)
chr6 (1-34)||(18773649-18773682)
chr6 (1-34)||(31738358-31738391)
[»] chr5 (33 HSPs)
chr5 (1-40)||(3076812-3076851)
chr5 (1-39)||(5062274-5062312)
chr5 (1-39)||(2472518-2472556)
chr5 (1-35)||(20988684-20988718)
chr5 (1-34)||(1982707-1982740)
chr5 (1-34)||(4568062-4568095)
chr5 (1-34)||(5061023-5061056)
chr5 (1-34)||(15153872-15153905)
chr5 (1-34)||(15510351-15510384)
chr5 (1-34)||(21389229-21389262)
chr5 (1-34)||(28236981-28237014)
chr5 (1-33)||(12937785-12937817)
chr5 (1-41)||(16802189-16802229)
chr5 (1-41)||(19050737-19050777)
chr5 (1-32)||(1982926-1982957)
chr5 (1-40)||(15613494-15613533)
chr5 (1-32)||(16802377-16802408)
chr5 (1-40)||(32415273-32415312)
chr5 (1-40)||(32780170-32780209)
chr5 (1-40)||(37380387-37380426)
chr5 (1-31)||(15509193-15509223)
chr5 (1-31)||(19051027-19051057)
chr5 (1-39)||(21306581-21306619)
chr5 (1-39)||(21314419-21314457)
chr5 (1-31)||(37371055-37371085)
chr5 (1-34)||(2472325-2472358)
chr5 (1-34)||(6914710-6914743)
chr5 (1-34)||(6914900-6914933)
chr5 (1-34)||(12937970-12938003)
chr5 (1-34)||(12952121-12952154)
chr5 (1-34)||(21387632-21387665)
chr5 (1-34)||(32411959-32411992)
chr5 (1-33)||(12951949-12951981)
[»] chr3 (54 HSPs)
chr3 (1-42)||(30431362-30431403)
chr3 (1-37)||(19579382-19579418)
chr3 (1-36)||(7820383-7820418)
chr3 (1-36)||(23886914-23886949)
chr3 (1-36)||(51214254-51214289)
chr3 (1-35)||(7583704-7583738)
chr3 (1-35)||(32974311-32974345)
chr3 (1-39)||(47855426-47855464)
chr3 (1-35)||(48035412-48035446)
chr3 (1-34)||(383060-383093)
chr3 (1-34)||(2225112-2225145)
chr3 (1-34)||(11220746-11220779)
chr3 (1-34)||(12105354-12105387)
chr3 (1-34)||(13041942-13041975)
chr3 (1-34)||(13050019-13050052)
chr3 (1-34)||(19579215-19579248)
chr3 (1-34)||(23886695-23886728)
chr3 (1-34)||(32973134-32973167)
chr3 (1-34)||(46987320-46987353)
chr3 (1-34)||(46988557-46988590)
chr3 (1-34)||(52292589-52292622)
chr3 (1-34)||(53047892-53047925)
chr3 (1-34)||(54109491-54109524)
chr3 (1-37)||(5810214-5810250)
chr3 (1-33)||(12105573-12105605)
chr3 (1-33)||(46988340-46988372)
chr3 (1-37)||(51401439-51401475)
chr3 (1-33)||(53347086-53347118)
chr3 (4-39)||(7822077-7822112)
chr3 (1-40)||(19283949-19283988)
chr3 (1-32)||(35633224-35633255)
chr3 (1-40)||(54654054-54654093)
chr3 (1-35)||(12106595-12106629)
chr3 (1-31)||(52293611-52293641)
chr3 (1-30)||(381954-381983)
chr3 (5-34)||(7575378-7575407)
chr3 (1-34)||(7583465-7583498)
chr3 (1-34)||(11483075-11483108)
chr3 (1-34)||(19283729-19283762)
chr3 (1-34)||(23886111-23886144)
chr3 (1-34)||(30431950-30431983)
chr3 (1-38)||(30838333-30838370)
chr3 (1-34)||(33563944-33563977)
chr3 (1-34)||(34901647-34901680)
chr3 (1-34)||(39288527-39288560)
chr3 (2-39)||(48252923-48252960)
chr3 (1-34)||(48825807-48825840)
chr3 (1-34)||(51213446-51213479)
chr3 (1-34)||(51400210-51400243)
chr3 (1-34)||(53049125-53049158)
chr3 (1-34)||(53342711-53342744)
chr3 (1-34)||(55443638-55443671)
chr3 (1-33)||(7583955-7583987)
chr3 (11-39)||(33573453-33573481)
[»] chr1 (49 HSPs)
chr1 (1-38)||(30548487-30548524)
chr1 (1-37)||(52370975-52371011)
chr1 (1-36)||(1898092-1898127)
chr1 (1-35)||(33850296-33850330)
chr1 (1-35)||(33943648-33943682)
chr1 (1-34)||(2236808-2236841)
chr1 (1-34)||(2238066-2238099)
chr1 (1-34)||(14390253-14390286)
chr1 (1-34)||(20953283-20953316)
chr1 (1-34)||(25866760-25866793)
chr1 (1-34)||(27690717-27690750)
chr1 (1-34)||(28309757-28309790)
chr1 (1-34)||(29001210-29001243)
chr1 (1-34)||(33941312-33941345)
chr1 (1-34)||(35683050-35683083)
chr1 (1-34)||(48974494-48974527)
chr1 (1-38)||(51424242-51424279)
chr1 (1-34)||(51760034-51760067)
chr1 (1-33)||(9123487-9123519)
chr1 (1-40)||(13642645-13642684)
chr1 (1-40)||(21276983-21277022)
chr1 (1-40)||(25889580-25889619)
chr1 (1-36)||(34531656-34531691)
chr1 (1-36)||(48973191-48973226)
chr1 (1-35)||(1061322-1061356)
chr1 (1-31)||(1898002-1898032)
chr1 (1-31)||(25035356-25035386)
chr1 (1-31)||(25040569-25040599)
chr1 (1-35)||(32823452-32823486)
chr1 (1-31)||(38458084-38458114)
chr1 (1-35)||(44338881-44338915)
chr1 (1-39)||(47411536-47411574)
chr1 (1-35)||(47511361-47511395)
chr1 (1-31)||(50679909-50679939)
chr1 (1-31)||(52371872-52371902)
chr1 (1-34)||(1873942-1873975)
chr1 (1-34)||(14312770-14312803)
chr1 (1-34)||(20171250-20171283)
chr1 (1-34)||(25866168-25866201)
chr1 (1-34)||(31860546-31860579)
chr1 (1-34)||(34532790-34532823)
chr1 (1-34)||(35684290-35684323)
chr1 (1-34)||(46280859-46280892)
chr1 (1-34)||(47511953-47511986)
chr1 (1-34)||(50678361-50678394)
chr1 (1-34)||(52371197-52371230)
chr1 (1-33)||(4387989-4388021)
chr1 (1-37)||(44977213-44977249)
chr1 (1-41)||(52439373-52439413)
[»] chr8 (23 HSPs)
chr8 (1-41)||(3271148-3271188)
chr8 (1-35)||(7561793-7561827)
chr8 (1-34)||(6844661-6844694)
chr8 (1-34)||(7565374-7565407)
chr8 (1-34)||(15988999-15989032)
chr8 (1-34)||(21551917-21551950)
chr8 (1-34)||(21552963-21552996)
chr8 (1-34)||(24068325-24068358)
chr8 (1-34)||(40102216-40102249)
chr8 (1-34)||(41178758-41178791)
chr8 (1-34)||(45385882-45385915)
chr8 (1-33)||(24706300-24706332)
chr8 (1-32)||(13360350-13360381)
chr8 (1-32)||(45384237-45384268)
chr8 (1-31)||(3612671-3612701)
chr8 (1-35)||(8502077-8502111)
chr8 (1-39)||(15989358-15989396)
chr8 (1-34)||(3271893-3271926)
chr8 (1-34)||(4675966-4675999)
chr8 (1-34)||(29441611-29441644)
chr8 (1-34)||(30864543-30864576)
chr8 (1-30)||(40103026-40103055)
chr8 (1-37)||(38591095-38591131)
[»] chr2 (33 HSPs)
chr2 (1-40)||(5565233-5565272)
chr2 (1-40)||(10477599-10477638)
chr2 (1-36)||(12854192-12854227)
chr2 (1-40)||(41313355-41313394)
chr2 (1-35)||(2306748-2306782)
chr2 (1-39)||(3254846-3254884)
chr2 (1-39)||(14573896-14573934)
chr2 (1-35)||(17179339-17179373)
chr2 (1-34)||(3665219-3665252)
chr2 (1-34)||(5564054-5564087)
chr2 (1-34)||(6706921-6706954)
chr2 (1-34)||(14482179-14482212)
chr2 (1-34)||(17179055-17179088)
chr2 (1-34)||(17859354-17859387)
chr2 (1-34)||(43015534-43015567)
chr2 (1-40)||(4628871-4628910)
chr2 (4-35)||(12852880-12852911)
chr2 (1-36)||(15268374-15268409)
chr2 (1-36)||(27657835-27657870)
chr2 (1-32)||(30202690-30202721)
chr2 (1-36)||(42249876-42249911)
chr2 (1-40)||(42596549-42596588)
chr2 (1-35)||(21545157-21545191)
chr2 (1-39)||(33837843-33837881)
chr2 (1-34)||(17858453-17858486)
chr2 (1-34)||(21541056-21541089)
chr2 (1-34)||(27262708-27262741)
chr2 (1-34)||(27264661-27264694)
chr2 (1-34)||(41312495-41312528)
chr2 (5-34)||(42246586-42246615)
chr2 (1-38)||(42772429-42772466)
chr2 (1-33)||(2305536-2305568)
chr2 (1-37)||(37867748-37867784)
[»] scaffold0178 (2 HSPs)
scaffold0178 (1-34)||(2353-2386)
scaffold0178 (1-39)||(1202-1240)
[»] scaffold0177 (1 HSPs)
scaffold0177 (1-34)||(1750-1783)
[»] scaffold0155 (1 HSPs)
scaffold0155 (1-34)||(5164-5197)
[»] scaffold0839 (2 HSPs)
scaffold0839 (1-40)||(213-252)
scaffold0839 (1-34)||(20-53)
[»] scaffold0038 (1 HSPs)
scaffold0038 (1-32)||(25919-25950)
[»] scaffold0007 (1 HSPs)
scaffold0007 (1-39)||(28346-28384)
[»] scaffold0649 (1 HSPs)
scaffold0649 (1-34)||(3996-4029)
[»] scaffold0316 (1 HSPs)
scaffold0316 (1-34)||(11859-11892)


Alignment Details
Target: chr4 (Bit Score: 461; Significance: 0; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 461; E-Value: 0
Query Start/End: Original strand, 38 - 498
Target Start/End: Original strand, 38542853 - 38543313
Alignment:
Q  38 aaatgtgtgagtcgatgggataaatgccacgaagccaataagagccagatggctattttagttcgtaacgccacctccttctctcactcttcatgcatta 137  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38542853 aaatgtgtgagtcgatgggataaatgccacgaagccaataagagccagatggctattttagttcgtaacgccacctccttctctcactcttcatgcatta 38542952  T
Q  138 tatataacaatacaacttctcacccatttaaaccctccaatttgttcatcacaacaccttgtcataaatcctaaccctctctttcaatctatctctctca 237  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38542953 tatataacaatacaacttctcacccatttaaaccctccaatttgttcatcacaacaccttgtcataaatcctaaccctctctttcaatctatctctctca 38543052  T
Q  238 cacacacgtgttctgtttgaattcctatttttggtagtaagaaacaacgatggttgttctttctcaacaagctacactaaacgagttatttcacataaac 337  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38543053 cacacacgtgttctgtttgaattcctatttttggtagtaagaaacaacgatggttgttctttctcaacaagctacactaaacgagttatttcacataaac 38543152  T
Q  338 acatgcaaaccaacaagttatgtattcaaaggtgttccagaggttgacctttcagacccagaagctaagacactaatagtcaacgcatgtacagaatttg 437  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38543153 acatgcaaaccaacaagttatgtattcaaaggtgttccagaggttgacctttcagacccagaagctaagacactaatagtcaacgcatgtacagaatttg 38543252  T
Q  438 gattctttaaggttgttaaccaccaagttccgttagagttgataaccaatttagaaaatga 498  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38543253 gattctttaaggttgttaaccaccaagttccgttagagttgataaccaatttagaaaatga 38543313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 56001356 - 56001392
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaaa 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  56001356 aaataagttaagggaccaaagcatgtattaagccaaa 56001392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 15445464 - 15445430
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcca 35  Q
    |||||||||||||||||||||||||||||||||||    
T  15445464 aaataagttaagggaccaaagcatgtattaagcca 15445430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 26428684 - 26428650
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcca 35  Q
    |||||||||||||||||||||||||||||||||||    
T  26428684 aaataagttaagggaccaaagcatgtattaagcca 26428650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 29834520 - 29834554
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcca 35  Q
    |||||||||||||||||||||||||||||||||||    
T  29834520 aaataagttaagggaccaaagcatgtattaagcca 29834554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 44655749 - 44655715
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcca 35  Q
    |||||||||||||||||||||||||||||||||||    
T  44655749 aaataagttaagggaccaaagcatgtattaagcca 44655715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 3528225 - 3528192
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  3528225 aaataagttaagggaccaaagcatgtattaagcc 3528192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 15446758 - 15446791
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  15446758 aaataagttaagggaccaaagcatgtattaagcc 15446791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 29833400 - 29833367
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  29833400 aaataagttaagggaccaaagcatgtattaagcc 29833367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 30672152 - 30672185
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  30672152 aaataagttaagggaccaaagcatgtattaagcc 30672185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 53401539 - 53401572
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  53401539 aaataagttaagggaccaaagcatgtattaagcc 53401572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 15317730 - 15317695
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaa 36  Q
    |||||||||||||||||||||||||| |||||||||    
T  15317730 aaataagttaagggaccaaagcatgtgttaagccaa 15317695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 26393215 - 26393254
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaaaaaa 40  Q
    |||||||||||||||||||| |||||||||| ||||||||    
T  26393215 aaataagttaagggaccaaatcatgtattaaaccaaaaaa 26393254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 28370729 - 28370764
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaa 36  Q
    ||||||||||||||||||||||||||||||| ||||    
T  28370729 aaataagttaagggaccaaagcatgtattaaaccaa 28370764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 52658939 - 52658904
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaa 36  Q
    |||||||||||||||||||| |||||||||||||||    
T  52658939 aaataagttaagggaccaaaacatgtattaagccaa 52658904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 2310870 - 2310900
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaa 31  Q
    |||||||||||||||||||||||||||||||    
T  2310870 aaataagttaagggaccaaagcatgtattaa 2310900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 23203050 - 23203080
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaa 31  Q
    |||||||||||||||||||||||||||||||    
T  23203050 aaataagttaagggaccaaagcatgtattaa 23203080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 937186 - 937219
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    |||||| |||||||||||||||||||||||||||    
T  937186 aaataaattaagggaccaaagcatgtattaagcc 937219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 8516940 - 8516973
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||| ||||||||||||    
T  8516940 aaataagttaagggaccaaagtatgtattaagcc 8516973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 12396962 - 12396995
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    |||||||||||||||||||| |||||||||||||    
T  12396962 aaataagttaagggaccaaaacatgtattaagcc 12396995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 15317915 - 15317948
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||| ||||||||||||||||||||||||    
T  15317915 aaataagttgagggaccaaagcatgtattaagcc 15317948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 19048932 - 19048899
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    |||||| |||||||||||||||||||||||||||    
T  19048932 aaataaattaagggaccaaagcatgtattaagcc 19048899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 23202268 - 23202235
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    |||||| |||||||||||||||||||||||||||    
T  23202268 aaataaattaagggaccaaagcatgtattaagcc 23202235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 23202864 - 23202831
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||| ||||||||||||||||||||||||    
T  23202864 aaataagttgagggaccaaagcatgtattaagcc 23202831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 26202474 - 26202507
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    |||||||||||||||||||| |||||||||||||    
T  26202474 aaataagttaagggaccaaaacatgtattaagcc 26202507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 28189385 - 28189418
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||| ||||||||||||||||||||||||    
T  28189385 aaataagttgagggaccaaagcatgtattaagcc 28189418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 28509961 - 28509994
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||| ||||||||||||||||||||||||    
T  28509961 aaataagttgagggaccaaagcatgtattaagcc 28509994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 39135598 - 39135635
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaaaa 38  Q
    |||||| |||||||||||||||||||||||| ||||||    
T  39135598 aaataaattaagggaccaaagcatgtattaaaccaaaa 39135635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 44664414 - 44664447
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||| ||||||||||||    
T  44664414 aaataagttaagggaccaaaggatgtattaagcc 44664447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 52880841 - 52880808
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||| ||||||||||||||||||    
T  52880841 aaataagttaagggagcaaagcatgtattaagcc 52880808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 53177106 - 53177139
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    |||||||||||||||||||| |||||||||||||    
T  53177106 aaataagttaagggaccaaaacatgtattaagcc 53177139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 53400213 - 53400180
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    |||||||||||||| |||||||||||||||||||    
T  53400213 aaataagttaaggggccaaagcatgtattaagcc 53400180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 56000315 - 56000282
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||| ||||||||||||||||||    
T  56000315 aaataagttaagggatcaaagcatgtattaagcc 56000282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 56297767 - 56297800
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||| ||||||||||||||||    
T  56297767 aaataagttaagggacccaagcatgtattaagcc 56297800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 18668791 - 18668752
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaaaaaa 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  18668791 aaataagttaagggaccaaagcatgtattaagccaaaaaa 18668752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 7345942 - 7345907
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaa 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  7345942 aaataagttaagggaccaaagcatgtattaagccaa 7345907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 34557425 - 34557386
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaaaaaa 40  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  34557425 aaataagttaaggaaccaaagcatgtattaagccaaaaaa 34557386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 36702805 - 36702771
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcca 35  Q
    |||||||||||||||||||||||||||||||||||    
T  36702805 aaataagttaagggaccaaagcatgtattaagcca 36702771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 38779005 - 38778967
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaaaaa 39  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  38779005 aaatatgttaagggaccaaagcatgtattaagccaaaaa 38778967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 41616652 - 41616618
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcca 35  Q
    |||||||||||||||||||||||||||||||||||    
T  41616652 aaataagttaagggaccaaagcatgtattaagcca 41616618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 43704636 - 43704602
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcca 35  Q
    |||||||||||||||||||||||||||||||||||    
T  43704636 aaataagttaagggaccaaagcatgtattaagcca 43704602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 1884268 - 1884235
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  1884268 aaataagttaagggaccaaagcatgtattaagcc 1884235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 1885329 - 1885362
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  1885329 aaataagttaagggaccaaagcatgtattaagcc 1885362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 6772756 - 6772723
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  6772756 aaataagttaagggaccaaagcatgtattaagcc 6772723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 10338215 - 10338182
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  10338215 aaataagttaagggaccaaagcatgtattaagcc 10338182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 10338401 - 10338434
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  10338401 aaataagttaagggaccaaagcatgtattaagcc 10338434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 18801243 - 18801210
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  18801243 aaataagttaagggaccaaagcatgtattaagcc 18801210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 21171323 - 21171290
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  21171323 aaataagttaagggaccaaagcatgtattaagcc 21171290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 32610712 - 32610679
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  32610712 aaataagttaagggaccaaagcatgtattaagcc 32610679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 33228875 - 33228842
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  33228875 aaataagttaagggaccaaagcatgtattaagcc 33228842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 35480236 - 35480203
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  35480236 aaataagttaagggaccaaagcatgtattaagcc 35480203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 36673924 - 36673957
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  36673924 aaataagttaagggaccaaagcatgtattaagcc 36673957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 37373562 - 37373529
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  37373562 aaataagttaagggaccaaagcatgtattaagcc 37373529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 40501261 - 40501228
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  40501261 aaataagttaagggaccaaagcatgtattaagcc 40501228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 41126267 - 41126234
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  41126267 aaataagttaagggaccaaagcatgtattaagcc 41126234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 43705494 - 43705461
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  43705494 aaataagttaagggaccaaagcatgtattaagcc 43705461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 41618587 - 41618619
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagc 33  Q
    |||||||||||||||||||||||||||||||||    
T  41618587 aaataagttaagggaccaaagcatgtattaagc 41618619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 30224064 - 30224095
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaag 32  Q
    ||||||||||||||||||||||||||||||||    
T  30224064 aaataagttaagggaccaaagcatgtattaag 30224095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 34558389 - 34558420
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaag 32  Q
    ||||||||||||||||||||||||||||||||    
T  34558389 aaataagttaagggaccaaagcatgtattaag 34558420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 48755636 - 48755667
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaag 32  Q
    ||||||||||||||||||||||||||||||||    
T  48755636 aaataagttaagggaccaaagcatgtattaag 48755667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 2 - 40
Target Start/End: Complemental strand, 1903857 - 1903819
Alignment:
Q  2 aataagttaagggaccaaagcatgtattaagccaaaaaa 40  Q
    |||||||||||| |||||||||||||||| |||||||||    
T  1903857 aataagttaaggaaccaaagcatgtattatgccaaaaaa 1903819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 1904108 - 1904138
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaa 31  Q
    |||||||||||||||||||||||||||||||    
T  1904108 aaataagttaagggaccaaagcatgtattaa 1904138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 34
Target Start/End: Original strand, 7347311 - 7347341
Alignment:
Q  4 taagttaagggaccaaagcatgtattaagcc 34  Q
    |||||||||||||||||||||||||||||||    
T  7347311 taagttaagggaccaaagcatgtattaagcc 7347341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 21171574 - 21171604
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaa 31  Q
    |||||||||||||||||||||||||||||||    
T  21171574 aaataagttaagggaccaaagcatgtattaa 21171604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 33229621 - 33229659
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaaaaa 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  33229621 aaataaattaaggaaccaaagcatgtattaagccaaaaa 33229659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 35088050 - 35088084
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcca 35  Q
    |||||||||||||||||||| ||||||||||||||    
T  35088050 aaataagttaagggaccaaaacatgtattaagcca 35088084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 37725907 - 37725877
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaa 31  Q
    |||||||||||||||||||||||||||||||    
T  37725907 aaataagttaagggaccaaagcatgtattaa 37725877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 38001532 - 38001502
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaa 31  Q
    |||||||||||||||||||||||||||||||    
T  38001532 aaataagttaagggaccaaagcatgtattaa 38001502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 38002602 - 38002636
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcca 35  Q
    |||||||||||| ||||||||||||||||||||||    
T  38002602 aaataagttaagagaccaaagcatgtattaagcca 38002636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 2904135 - 2904168
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    |||||| |||||||||||||||||||||||||||    
T  2904135 aaataaattaagggaccaaagcatgtattaagcc 2904168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 6773478 - 6773511
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||| ||||||||||||    
T  6773478 aaataagttaagggaccaaagtatgtattaagcc 6773511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 8439794 - 8439761
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||| ||||||||||||||||||    
T  8439794 aaataagttaagggatcaaagcatgtattaagcc 8439761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 18670591 - 18670624
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||| ||||||||||||    
T  18670591 aaataagttaagggaccaaaggatgtattaagcc 18670624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 22744774 - 22744737
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaaaa 38  Q
    ||||||||||||||||||||  ||||||||||||||||    
T  22744774 aaataagttaagggaccaaatgatgtattaagccaaaa 22744737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 29754774 - 29754807
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    |||||||||||||||||||||||| |||||||||    
T  29754774 aaataagttaagggaccaaagcatatattaagcc 29754807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 40501543 - 40501576
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    |||||||||||||||| |||||||||||||||||    
T  40501543 aaataagttaagggactaaagcatgtattaagcc 40501576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 41127259 - 41127292
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||| ||||||||||||||||||    
T  41127259 aaataagttaagggatcaaagcatgtattaagcc 41127292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 43705630 - 43705663
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    |||||||||||||||||||| |||||||||||||    
T  43705630 aaataagttaagggaccaaaacatgtattaagcc 43705663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 47809518 - 47809485
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    |||||| |||||||||||||||||||||||||||    
T  47809518 aaataaattaagggaccaaagcatgtattaagcc 47809485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 47810227 - 47810260
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    |||||||||||||||||||| |||||||||||||    
T  47810227 aaataagttaagggaccaaaacatgtattaagcc 47810260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 43006413 - 43006373
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaaaaaat 41  Q
    ||||||||||||||||||||  |||||||||||| ||||||    
T  43006413 aaataagttaagggaccaaatgatgtattaagcctaaaaat 43006373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 19368606 - 19368645
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaaaaaa 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  19368606 aaataagttaagggaccaaagcatgtattaagccaaaaaa 19368645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 5999671 - 5999707
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaaa 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  5999671 aaataagttaagggaccaaagcatgtattaagccaaa 5999707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 13173065 - 13173030
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaa 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  13173065 aaataagttaagggaccaaagcatgtattaagccaa 13173030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 12203359 - 12203397
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaaaaa 39  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  12203359 aaataagttaagggactaaagcatgtattaagccaaaaa 12203397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 19655066 - 19655100
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcca 35  Q
    |||||||||||||||||||||||||||||||||||    
T  19655066 aaataagttaagggaccaaagcatgtattaagcca 19655100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 12202380 - 12202413
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  12202380 aaataagttaagggaccaaagcatgtattaagcc 12202413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 21749890 - 21749923
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  21749890 aaataagttaagggaccaaagcatgtattaagcc 21749923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 8412404 - 8412443
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaaaaaa 40  Q
    ||||||||||||||||||||  ||||||||||||||||||    
T  8412404 aaataagttaagggaccaaataatgtattaagccaaaaaa 8412443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 17916557 - 17916592
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaa 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  17916557 aaataagttaagggaccaaagcatatattaagccaa 17916592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 22298632 - 22298593
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaaaaaa 40  Q
    ||||||||||| |||||||||||||||||||||| |||||    
T  22298632 aaataagttaaaggaccaaagcatgtattaagcctaaaaa 22298593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 26581981 - 26581942
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaaaaaa 40  Q
    |||||||||||||||||||| |||||| ||||||||||||    
T  26581981 aaataagttaagggaccaaaacatgtactaagccaaaaaa 26581942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 28225452 - 28225421
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaag 32  Q
    ||||||||||||||||||||||||||||||||    
T  28225452 aaataagttaagggaccaaagcatgtattaag 28225421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 34
Target Start/End: Original strand, 8224429 - 8224459
Alignment:
Q  4 taagttaagggaccaaagcatgtattaagcc 34  Q
    |||||||||||||||||||||||||||||||    
T  8224429 taagttaagggaccaaagcatgtattaagcc 8224459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 12202225 - 12202187
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaaaaa 39  Q
    |||||||||||||||| ||||||||||||||||| ||||    
T  12202225 aaataagttaagggacgaaagcatgtattaagcctaaaa 12202187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 19367745 - 19367711
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcca 35  Q
    |||||||||||||||| ||||||||||||||||||    
T  19367745 aaataagttaagggacgaaagcatgtattaagcca 19367711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 33328403 - 33328373
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaa 31  Q
    |||||||||||||||||||||||||||||||    
T  33328403 aaataagttaagggaccaaagcatgtattaa 33328373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 11104465 - 11104498
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||| ||||||||||||||||||||||    
T  11104465 aaataagttaaaggaccaaagcatgtattaagcc 11104498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 17915737 - 17915696
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaaaaaatg 42  Q
    ||||||||| ||||||||||||||||||||| ||||| ||||    
T  17915737 aaataagttgagggaccaaagcatgtattaaaccaaataatg 17915696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 18773682 - 18773649
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||| ||||||||||||||||||    
T  18773682 aaataagttaagggatcaaagcatgtattaagcc 18773649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 31738391 - 31738358
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||| ||||||||||||    
T  31738391 aaataagttaagggaccaaaggatgtattaagcc 31738358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 3076851 - 3076812
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaaaaaa 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  3076851 aaataagttaagggaccaaagcatgtattaagccaaaaaa 3076812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 5062274 - 5062312
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaaaaa 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  5062274 aaataagttaagggaccaaagcatgtattaagccaaaaa 5062312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 2472518 - 2472556
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaaaaa 39  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  2472518 aaataagttaagggaccaaagcatgtattaaggcaaaaa 2472556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 20988718 - 20988684
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcca 35  Q
    |||||||||||||||||||||||||||||||||||    
T  20988718 aaataagttaagggaccaaagcatgtattaagcca 20988684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 1982740 - 1982707
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  1982740 aaataagttaagggaccaaagcatgtattaagcc 1982707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 4568062 - 4568095
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  4568062 aaataagttaagggaccaaagcatgtattaagcc 4568095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 5061056 - 5061023
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  5061056 aaataagttaagggaccaaagcatgtattaagcc 5061023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 15153905 - 15153872
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  15153905 aaataagttaagggaccaaagcatgtattaagcc 15153872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 15510351 - 15510384
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  15510351 aaataagttaagggaccaaagcatgtattaagcc 15510384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 21389229 - 21389262
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  21389229 aaataagttaagggaccaaagcatgtattaagcc 21389262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 28236981 - 28237014
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  28236981 aaataagttaagggaccaaagcatgtattaagcc 28237014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 12937817 - 12937785
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagc 33  Q
    |||||||||||||||||||||||||||||||||    
T  12937817 aaataagttaagggaccaaagcatgtattaagc 12937785  T

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Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 16802229 - 16802189
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaaaaaat 41  Q
    ||||||||||||||||| |||||||||||||||||| ||||    
T  16802229 aaataagttaagggacccaagcatgtattaagccaataaat 16802189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 19050777 - 19050737
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaaaaaat 41  Q
    |||||||||||||||||||| ||||||||||||||| ||||    
T  19050777 aaataagttaagggaccaaaacatgtattaagccaagaaat 19050737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 1982926 - 1982957
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaag 32  Q
    ||||||||||||||||||||||||||||||||    
T  1982926 aaataagttaagggaccaaagcatgtattaag 1982957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 15613533 - 15613494
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaaaaaa 40  Q
    ||||||||||||||| |||||||||||||||| |||||||    
T  15613533 aaataagttaagggatcaaagcatgtattaagtcaaaaaa 15613494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 16802377 - 16802408
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaag 32  Q
    ||||||||||||||||||||||||||||||||    
T  16802377 aaataagttaagggaccaaagcatgtattaag 16802408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 32415273 - 32415312
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaaaaaa 40  Q
    ||||||||||||||||||||| |||||||||||| |||||    
T  32415273 aaataagttaagggaccaaagtatgtattaagcctaaaaa 32415312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 32780170 - 32780209
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaaaaaa 40  Q
    |||||||||||||||||||| ||||||||||||| |||||    
T  32780170 aaataagttaagggaccaaaacatgtattaagcctaaaaa 32780209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 37380387 - 37380426
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaaaaaa 40  Q
    ||||||||| |||||||||||||||||||||||| |||||    
T  37380387 aaataagttgagggaccaaagcatgtattaagcctaaaaa 37380426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 15509223 - 15509193
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaa 31  Q
    |||||||||||||||||||||||||||||||    
T  15509223 aaataagttaagggaccaaagcatgtattaa 15509193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 19051027 - 19051057
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaa 31  Q
    |||||||||||||||||||||||||||||||    
T  19051027 aaataagttaagggaccaaagcatgtattaa 19051057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 21306619 - 21306581
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaaaaa 39  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  21306619 aaataagttaagggatcaaagcatgtattaagcctaaaa 21306581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 21314457 - 21314419
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaaaaa 39  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  21314457 aaataagttaagggatcaaagcatgtattaagcctaaaa 21314419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 37371085 - 37371055
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaa 31  Q
    |||||||||||||||||||||||||||||||    
T  37371085 aaataagttaagggaccaaagcatgtattaa 37371055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 2472358 - 2472325
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||| ||||||||||||||||||    
T  2472358 aaataagttaagggagcaaagcatgtattaagcc 2472325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 6914743 - 6914710
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||| ||||||    
T  6914743 aaataagttaagggaccaaagcatgtactaagcc 6914710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 6914900 - 6914933
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    |||||||||||||||||||| |||||||||||||    
T  6914900 aaataagttaagggaccaaatcatgtattaagcc 6914933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 12937970 - 12938003
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||| ||||||||||||||||||    
T  12937970 aaataagttaagggatcaaagcatgtattaagcc 12938003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 12952121 - 12952154
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||| ||||||||||||||||||    
T  12952121 aaataagttaagggatcaaagcatgtattaagcc 12952154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 21387665 - 21387632
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    |||||||||||||||||||||| |||||||||||    
T  21387665 aaataagttaagggaccaaagcttgtattaagcc 21387632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 32411992 - 32411959
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    |||||||||||||||||||| |||||||||||||    
T  32411992 aaataagttaagggaccaaaacatgtattaagcc 32411959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 12951981 - 12951949
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  12951981 aaataagttaagggatcaaagcatgtattaagc 12951949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000003; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 30431403 - 30431362
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaaaaaatg 42  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  30431403 aaataagttaagggaccaaagcatgtattaagccgaaaaatg 30431362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 19579382 - 19579418
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaaa 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  19579382 aaataagttaagggaccaaagcatgtattaagccaaa 19579418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 7820418 - 7820383
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaa 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  7820418 aaataagttaagggaccaaagcatgtattaagccaa 7820383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 23886914 - 23886949
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaa 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  23886914 aaataagttaagggaccaaagcatgtattaagccaa 23886949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 51214254 - 51214289
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaa 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  51214254 aaataagttaagggaccaaagcatgtattaagccaa 51214289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 7583738 - 7583704
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcca 35  Q
    |||||||||||||||||||||||||||||||||||    
T  7583738 aaataagttaagggaccaaagcatgtattaagcca 7583704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 32974311 - 32974345
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcca 35  Q
    |||||||||||||||||||||||||||||||||||    
T  32974311 aaataagttaagggaccaaagcatgtattaagcca 32974345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 47855426 - 47855464
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaaaaa 39  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  47855426 aaataagttaagggaccaaagcatgtattaagcctaaaa 47855464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 48035412 - 48035446
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcca 35  Q
    |||||||||||||||||||||||||||||||||||    
T  48035412 aaataagttaagggaccaaagcatgtattaagcca 48035446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 383060 - 383093
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  383060 aaataagttaagggaccaaagcatgtattaagcc 383093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 2225112 - 2225145
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  2225112 aaataagttaagggaccaaagcatgtattaagcc 2225145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 11220746 - 11220779
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  11220746 aaataagttaagggaccaaagcatgtattaagcc 11220779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 12105387 - 12105354
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  12105387 aaataagttaagggaccaaagcatgtattaagcc 12105354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 13041975 - 13041942
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  13041975 aaataagttaagggaccaaagcatgtattaagcc 13041942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 13050052 - 13050019
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  13050052 aaataagttaagggaccaaagcatgtattaagcc 13050019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 19579248 - 19579215
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  19579248 aaataagttaagggaccaaagcatgtattaagcc 19579215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 23886728 - 23886695
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  23886728 aaataagttaagggaccaaagcatgtattaagcc 23886695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 32973167 - 32973134
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  32973167 aaataagttaagggaccaaagcatgtattaagcc 32973134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 46987353 - 46987320
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  46987353 aaataagttaagggaccaaagcatgtattaagcc 46987320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 46988557 - 46988590
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  46988557 aaataagttaagggaccaaagcatgtattaagcc 46988590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 52292622 - 52292589
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  52292622 aaataagttaagggaccaaagcatgtattaagcc 52292589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 53047925 - 53047892
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  53047925 aaataagttaagggaccaaagcatgtattaagcc 53047892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 54109524 - 54109491
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  54109524 aaataagttaagggaccaaagcatgtattaagcc 54109491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 5810214 - 5810250
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaaa 37  Q
    |||||||||||||||||||| ||||||||||||||||    
T  5810214 aaataagttaagggaccaaatcatgtattaagccaaa 5810250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 12105573 - 12105605
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagc 33  Q
    |||||||||||||||||||||||||||||||||    
T  12105573 aaataagttaagggaccaaagcatgtattaagc 12105605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 46988372 - 46988340
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagc 33  Q
    |||||||||||||||||||||||||||||||||    
T  46988372 aaataagttaagggaccaaagcatgtattaagc 46988340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 51401439 - 51401475
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaaa 37  Q
    |||||||||||||||||| ||||||||||||||||||    
T  51401439 aaataagttaagggaccagagcatgtattaagccaaa 51401475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 53347086 - 53347118
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagc 33  Q
    |||||||||||||||||||||||||||||||||    
T  53347086 aaataagttaagggaccaaagcatgtattaagc 53347118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 39
Target Start/End: Original strand, 7822077 - 7822112
Alignment:
Q  4 taagttaagggaccaaagcatgtattaagccaaaaa 39  Q
    ||||||||||||||||||||||||||||||| ||||    
T  7822077 taagttaagggaccaaagcatgtattaagcctaaaa 7822112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 19283949 - 19283988
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaaaaaa 40  Q
    ||||||||||| ||||||||||||||||||||||| ||||    
T  19283949 aaataagttaaaggaccaaagcatgtattaagccagaaaa 19283988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 35633255 - 35633224
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaag 32  Q
    ||||||||||||||||||||||||||||||||    
T  35633255 aaataagttaagggaccaaagcatgtattaag 35633224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 54654054 - 54654093
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaaaaaa 40  Q
    ||||||||||||||||||||  ||||||||||||||||||    
T  54654054 aaataagttaagggaccaaatgatgtattaagccaaaaaa 54654093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 12106595 - 12106629
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcca 35  Q
    |||||||||||| ||||||||||||||||||||||    
T  12106595 aaataagttaagagaccaaagcatgtattaagcca 12106629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 52293611 - 52293641
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaa 31  Q
    |||||||||||||||||||||||||||||||    
T  52293611 aaataagttaagggaccaaagcatgtattaa 52293641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 381983 - 381954
Alignment:
Q  1 aaataagttaagggaccaaagcatgtatta 30  Q
    ||||||||||||||||||||||||||||||    
T  381983 aaataagttaagggaccaaagcatgtatta 381954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 34
Target Start/End: Complemental strand, 7575407 - 7575378
Alignment:
Q  5 aagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||    
T  7575407 aagttaagggaccaaagcatgtattaagcc 7575378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 7583498 - 7583465
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||| ||||||||||||||||||||||    
T  7583498 aaataagttaatggaccaaagcatgtattaagcc 7583465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 11483075 - 11483108
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    |||||||||||||||||||||||| |||||||||    
T  11483075 aaataagttaagggaccaaagcatatattaagcc 11483108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 19283762 - 19283729
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    |||||||||||||||||||| |||||||||||||    
T  19283762 aaataagttaagggaccaaaacatgtattaagcc 19283729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 23886144 - 23886111
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||| ||||||||||||    
T  23886144 aaataagttaagggaccaaagtatgtattaagcc 23886111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 30431983 - 30431950
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||| ||||||||||||||||||||||||    
T  30431983 aaataagttgagggaccaaagcatgtattaagcc 30431950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 30838370 - 30838333
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaaaa 38  Q
    ||||||||| |||||||||| |||||||||||||||||    
T  30838370 aaataagttgagggaccaaaacatgtattaagccaaaa 30838333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 33563977 - 33563944
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    |||||||||||||||||||| |||||||||||||    
T  33563977 aaataagttaagggaccaaaacatgtattaagcc 33563944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 34901680 - 34901647
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||| ||||||||||||||||||    
T  34901680 aaataagttaagggatcaaagcatgtattaagcc 34901647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 39288527 - 39288560
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    |||||||||||| |||||||||||||||||||||    
T  39288527 aaataagttaagtgaccaaagcatgtattaagcc 39288560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 48252960 - 48252923
Alignment:
Q  2 aataagttaagggaccaaagcatgtattaagccaaaaa 39  Q
    |||||||||||||||||||||||| |||||||| ||||    
T  48252960 aataagttaagggaccaaagcatgcattaagcctaaaa 48252923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 48825840 - 48825807
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    |||||||||||||||||||| |||||||||||||    
T  48825840 aaataagttaagggaccaaaacatgtattaagcc 48825807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 51213479 - 51213446
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    |||||||||||| |||||||||||||||||||||    
T  51213479 aaataagttaagagaccaaagcatgtattaagcc 51213446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 51400243 - 51400210
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    |||||||||||||||||||| |||||||||||||    
T  51400243 aaataagttaagggaccaaaacatgtattaagcc 51400210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 53049125 - 53049158
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    |||||||||||||||||||| |||||||||||||    
T  53049125 aaataagttaagggaccaaaacatgtattaagcc 53049158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 53342744 - 53342711
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||| ||||||||||||||||||||    
T  53342744 aaataagttaaggaaccaaagcatgtattaagcc 53342711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 55443638 - 55443671
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||| ||||||||||||    
T  55443638 aaataagttaagggaccaaagtatgtattaagcc 55443671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 7583987 - 7583955
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagc 33  Q
    |||||||||||||||||||||||| ||||||||    
T  7583987 aaataagttaagggaccaaagcatttattaagc 7583955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 11 - 39
Target Start/End: Original strand, 33573453 - 33573481
Alignment:
Q  11 agggaccaaagcatgtattaagccaaaaa 39  Q
    |||||||||||||||||||||||||||||    
T  33573453 agggaccaaagcatgtattaagccaaaaa 33573481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000003; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 30548524 - 30548487
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaaaa 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  30548524 aaataagttaagggaccaaagcatgtattaagccaaaa 30548487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 52371011 - 52370975
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaaa 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  52371011 aaataagttaagggaccaaagcatgtattaagccaaa 52370975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 1898092 - 1898127
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaa 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  1898092 aaataagttaagggaccaaagcatgtattaagccaa 1898127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 33850330 - 33850296
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcca 35  Q
    |||||||||||||||||||||||||||||||||||    
T  33850330 aaataagttaagggaccaaagcatgtattaagcca 33850296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 33943648 - 33943682
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcca 35  Q
    |||||||||||||||||||||||||||||||||||    
T  33943648 aaataagttaagggaccaaagcatgtattaagcca 33943682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 2236841 - 2236808
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  2236841 aaataagttaagggaccaaagcatgtattaagcc 2236808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 2238066 - 2238099
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  2238066 aaataagttaagggaccaaagcatgtattaagcc 2238099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 14390286 - 14390253
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  14390286 aaataagttaagggaccaaagcatgtattaagcc 14390253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 20953316 - 20953283
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  20953316 aaataagttaagggaccaaagcatgtattaagcc 20953283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 25866760 - 25866793
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  25866760 aaataagttaagggaccaaagcatgtattaagcc 25866793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 27690717 - 27690750
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  27690717 aaataagttaagggaccaaagcatgtattaagcc 27690750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 28309790 - 28309757
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  28309790 aaataagttaagggaccaaagcatgtattaagcc 28309757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 29001210 - 29001243
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  29001210 aaataagttaagggaccaaagcatgtattaagcc 29001243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 33941345 - 33941312
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  33941345 aaataagttaagggaccaaagcatgtattaagcc 33941312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 35683083 - 35683050
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  35683083 aaataagttaagggaccaaagcatgtattaagcc 35683050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 48974494 - 48974527
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  48974494 aaataagttaagggaccaaagcatgtattaagcc 48974527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 51424279 - 51424242
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaaaa 38  Q
    |||||||||||||||||||||| |||||||||||||||    
T  51424279 aaataagttaagggaccaaagcttgtattaagccaaaa 51424242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 51760067 - 51760034
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  51760067 aaataagttaagggaccaaagcatgtattaagcc 51760034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 9123487 - 9123519
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagc 33  Q
    |||||||||||||||||||||||||||||||||    
T  9123487 aaataagttaagggaccaaagcatgtattaagc 9123519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 13642645 - 13642684
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaaaaaa 40  Q
    ||||||||||| |||||||||||||||||||||| |||||    
T  13642645 aaataagttaaaggaccaaagcatgtattaagcctaaaaa 13642684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 21277022 - 21276983
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaaaaaa 40  Q
    ||||||||||||||||||||  ||||||||||||||||||    
T  21277022 aaataagttaagggaccaaataatgtattaagccaaaaaa 21276983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 25889580 - 25889619
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaaaaaa 40  Q
    ||||||||||||||| ||||||||||||||| ||||||||    
T  25889580 aaataagttaagggatcaaagcatgtattaaaccaaaaaa 25889619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 34531691 - 34531656
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaa 36  Q
    ||||||||||||||||||||||||||||||| ||||    
T  34531691 aaataagttaagggaccaaagcatgtattaaaccaa 34531656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 48973226 - 48973191
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaa 36  Q
    ||||||||||||| ||||||||||||||||||||||    
T  48973226 aaataagttaaggaaccaaagcatgtattaagccaa 48973191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 1061356 - 1061322
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcca 35  Q
    |||||||||||| ||||||||||||||||||||||    
T  1061356 aaataagttaagcgaccaaagcatgtattaagcca 1061322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 1898032 - 1898002
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaa 31  Q
    |||||||||||||||||||||||||||||||    
T  1898032 aaataagttaagggaccaaagcatgtattaa 1898002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 25035386 - 25035356
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaa 31  Q
    |||||||||||||||||||||||||||||||    
T  25035386 aaataagttaagggaccaaagcatgtattaa 25035356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 25040599 - 25040569
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaa 31  Q
    |||||||||||||||||||||||||||||||    
T  25040599 aaataagttaagggaccaaagcatgtattaa 25040569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 32823486 - 32823452
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  32823486 aaataagttaagggaccaaagcatatattaagcca 32823452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 38458114 - 38458084
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaa 31  Q
    |||||||||||||||||||||||||||||||    
T  38458114 aaataagttaagggaccaaagcatgtattaa 38458084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 44338915 - 44338881
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcca 35  Q
    |||||||||||||||| ||||||||||||||||||    
T  44338915 aaataagttaagggactaaagcatgtattaagcca 44338881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 47411536 - 47411574
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaaaaa 39  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  47411536 aaataagttaagggaccaaatgatgtattaagccaaaaa 47411574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 47511395 - 47511361
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  47511395 aaataagttaagggaccaaagcatatattaagcca 47511361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 50679909 - 50679939
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaa 31  Q
    |||||||||||||||||||||||||||||||    
T  50679909 aaataagttaagggaccaaagcatgtattaa 50679939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 52371872 - 52371902
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaa 31  Q
    |||||||||||||||||||||||||||||||    
T  52371872 aaataagttaagggaccaaagcatgtattaa 52371902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 1873942 - 1873975
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||| ||||||||||||||||||    
T  1873942 aaataagttaagggatcaaagcatgtattaagcc 1873975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 14312803 - 14312770
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    |||||||||||||||||||| |||||||||||||    
T  14312803 aaataagttaagggaccaaatcatgtattaagcc 14312770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 20171250 - 20171283
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||| ||||||||||||||||||||||    
T  20171250 aaataagttaaaggaccaaagcatgtattaagcc 20171283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 25866168 - 25866201
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    |||||| |||||||||||||||||||||||||||    
T  25866168 aaataatttaagggaccaaagcatgtattaagcc 25866201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 31860546 - 31860579
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    |||||||||||||||||||| |||||||||||||    
T  31860546 aaataagttaagggaccaaaacatgtattaagcc 31860579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 34532790 - 34532823
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||| ||||||||||||||||||||||    
T  34532790 aaataagttaaaggaccaaagcatgtattaagcc 34532823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 35684290 - 35684323
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||| ||||||||||||||||||||||    
T  35684290 aaataagttaatggaccaaagcatgtattaagcc 35684323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 46280859 - 46280892
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||| ||||||||||||||||||||||    
T  46280859 aaataagttaaaggaccaaagcatgtattaagcc 46280892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 47511986 - 47511953
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||| ||||||||||||||||||||||||    
T  47511986 aaataagttgagggaccaaagcatgtattaagcc 47511953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 50678394 - 50678361
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    |||||||||||||||||||| |||||||||||||    
T  50678394 aaataagttaagggaccaaatcatgtattaagcc 50678361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 52371197 - 52371230
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||| ||||||||||||||||||||    
T  52371197 aaataagttaaggaaccaaagcatgtattaagcc 52371230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 4388021 - 4387989
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  4388021 aaataagttaagagaccaaagcatgtattaagc 4387989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 44977249 - 44977213
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaaa 37  Q
    ||||||||||||||||||||  |||||||||||||||    
T  44977249 aaataagttaagggaccaaataatgtattaagccaaa 44977213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 52439373 - 52439413
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaaaaaat 41  Q
    ||||||||||||||||||||  ||||||||||||| |||||    
T  52439373 aaataagttaagggaccaaatgatgtattaagccataaaat 52439413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.00000000001; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 3271188 - 3271148
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaaaaaat 41  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  3271188 aaataagttaagggaccaaagcatgtattaagccaataaat 3271148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 7561827 - 7561793
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcca 35  Q
    |||||||||||||||||||||||||||||||||||    
T  7561827 aaataagttaagggaccaaagcatgtattaagcca 7561793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 6844661 - 6844694
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  6844661 aaataagttaagggaccaaagcatgtattaagcc 6844694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 7565374 - 7565407
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  7565374 aaataagttaagggaccaaagcatgtattaagcc 7565407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 15989032 - 15988999
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  15989032 aaataagttaagggaccaaagcatgtattaagcc 15988999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 21551950 - 21551917
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  21551950 aaataagttaagggaccaaagcatgtattaagcc 21551917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 21552996 - 21552963
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  21552996 aaataagttaagggaccaaagcatgtattaagcc 21552963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 24068358 - 24068325
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  24068358 aaataagttaagggaccaaagcatgtattaagcc 24068325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 40102249 - 40102216
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  40102249 aaataagttaagggaccaaagcatgtattaagcc 40102216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 41178758 - 41178791
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  41178758 aaataagttaagggaccaaagcatgtattaagcc 41178791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 45385882 - 45385915
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  45385882 aaataagttaagggaccaaagcatgtattaagcc 45385915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 24706300 - 24706332
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagc 33  Q
    |||||||||||||||||||||||||||||||||    
T  24706300 aaataagttaagggaccaaagcatgtattaagc 24706332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 13360381 - 13360350
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaag 32  Q
    ||||||||||||||||||||||||||||||||    
T  13360381 aaataagttaagggaccaaagcatgtattaag 13360350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 45384268 - 45384237
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaag 32  Q
    ||||||||||||||||||||||||||||||||    
T  45384268 aaataagttaagggaccaaagcatgtattaag 45384237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 3612671 - 3612701
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaa 31  Q
    |||||||||||||||||||||||||||||||    
T  3612671 aaataagttaagggaccaaagcatgtattaa 3612701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 8502111 - 8502077
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcca 35  Q
    |||||| ||||||||||||||||||||||||||||    
T  8502111 aaataaattaagggaccaaagcatgtattaagcca 8502077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 15989358 - 15989396
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaaaaa 39  Q
    |||||||||||||||||||| ||||||||||||| ||||    
T  15989358 aaataagttaagggaccaaaacatgtattaagcctaaaa 15989396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 3271926 - 3271893
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    |||||||||||||||||||| |||||||||||||    
T  3271926 aaataagttaagggaccaaatcatgtattaagcc 3271893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 4675966 - 4675999
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||| ||||||||||||||||||||||||    
T  4675966 aaataagttgagggaccaaagcatgtattaagcc 4675999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 29441644 - 29441611
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    |||||||||||| |||||||||||||||||||||    
T  29441644 aaataagttaagagaccaaagcatgtattaagcc 29441611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 30864543 - 30864576
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    |||||||||||||||||||| |||||||||||||    
T  30864543 aaataagttaagggaccaaatcatgtattaagcc 30864576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 40103026 - 40103055
Alignment:
Q  1 aaataagttaagggaccaaagcatgtatta 30  Q
    ||||||||||||||||||||||||||||||    
T  40103026 aaataagttaagggaccaaagcatgtatta 40103055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 38591095 - 38591131
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaaa 37  Q
    ||||||||||||||||||||  |||||||||||||||    
T  38591095 aaataagttaagggaccaaatgatgtattaagccaaa 38591131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000005; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 5565233 - 5565272
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaaaaaa 40  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  5565233 aaataagttaagggaccaaagcatgtattaagcctaaaaa 5565272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 10477599 - 10477638
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaaaaaa 40  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  10477599 aaataagttaagggaccaaaacatgtattaagccaaaaaa 10477638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 12854192 - 12854227
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaa 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  12854192 aaataagttaagggaccaaagcatgtattaagccaa 12854227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 41313355 - 41313394
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaaaaaa 40  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  41313355 aaataagttaagggaccaaaacatgtattaagccaaaaaa 41313394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 2306748 - 2306782
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcca 35  Q
    |||||||||||||||||||||||||||||||||||    
T  2306748 aaataagttaagggaccaaagcatgtattaagcca 2306782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 3254884 - 3254846
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaaaaa 39  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  3254884 aaataagttaagggaccaaagcatgtattaagcctaaaa 3254846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 14573896 - 14573934
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaaaaa 39  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  14573896 aaatatgttaagggaccaaagcatgtattaagccaaaaa 14573934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 17179339 - 17179373
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcca 35  Q
    |||||||||||||||||||||||||||||||||||    
T  17179339 aaataagttaagggaccaaagcatgtattaagcca 17179373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 3665252 - 3665219
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  3665252 aaataagttaagggaccaaagcatgtattaagcc 3665219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 5564087 - 5564054
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  5564087 aaataagttaagggaccaaagcatgtattaagcc 5564054  T

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Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 6706954 - 6706921
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  6706954 aaataagttaagggaccaaagcatgtattaagcc 6706921  T

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Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 14482179 - 14482212
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  14482179 aaataagttaagggaccaaagcatgtattaagcc 14482212  T

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Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 17179088 - 17179055
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  17179088 aaataagttaagggaccaaagcatgtattaagcc 17179055  T

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Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 17859354 - 17859387
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  17859354 aaataagttaagggaccaaagcatgtattaagcc 17859387  T

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Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 43015567 - 43015534
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  43015567 aaataagttaagggaccaaagcatgtattaagcc 43015534  T

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Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 4628910 - 4628871
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaaaaaa 40  Q
    |||||||||||||||| ||||||| |||||||||||||||    
T  4628910 aaataagttaagggactaaagcatatattaagccaaaaaa 4628871  T

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Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 35
Target Start/End: Complemental strand, 12852911 - 12852880
Alignment:
Q  4 taagttaagggaccaaagcatgtattaagcca 35  Q
    ||||||||||||||||||||||||||||||||    
T  12852911 taagttaagggaccaaagcatgtattaagcca 12852880  T

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Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 15268409 - 15268374
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaa 36  Q
    |||||||||||| |||||||||||||||||||||||    
T  15268409 aaataagttaagagaccaaagcatgtattaagccaa 15268374  T

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Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 27657835 - 27657870
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaa 36  Q
    |||||| |||||||||||||||||||||||||||||    
T  27657835 aaataaattaagggaccaaagcatgtattaagccaa 27657870  T

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Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 30202721 - 30202690
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaag 32  Q
    ||||||||||||||||||||||||||||||||    
T  30202721 aaataagttaagggaccaaagcatgtattaag 30202690  T

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Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 42249876 - 42249911
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaa 36  Q
    ||||||||||| ||||||||||||||||||||||||    
T  42249876 aaataagttaaaggaccaaagcatgtattaagccaa 42249911  T

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Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 42596588 - 42596549
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaaaaaa 40  Q
    ||||||||||||||||||||  ||||||||||||||||||    
T  42596588 aaataagttaagggaccaaatgatgtattaagccaaaaaa 42596549  T

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Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 21545157 - 21545191
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcca 35  Q
    |||||||||||||||||||| ||||||||||||||    
T  21545157 aaataagttaagggaccaaaacatgtattaagcca 21545191  T

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Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 33837843 - 33837881
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaaaaa 39  Q
    |||||||||||||||||||| ||||||||||||| ||||    
T  33837843 aaataagttaagggaccaaaacatgtattaagcctaaaa 33837881  T

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Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 17858486 - 17858453
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    |||||| |||||||||||||||||||||||||||    
T  17858486 aaataaattaagggaccaaagcatgtattaagcc 17858453  T

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Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 21541089 - 21541056
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    |||| |||||||||||||||||||||||||||||    
T  21541089 aaattagttaagggaccaaagcatgtattaagcc 21541056  T

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Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 27262741 - 27262708
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||| ||||||||||||||||||||||||    
T  27262741 aaataagttgagggaccaaagcatgtattaagcc 27262708  T

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Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 27264661 - 27264694
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    |||||||||||| |||||||||||||||||||||    
T  27264661 aaataagttaagagaccaaagcatgtattaagcc 27264694  T

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Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 41312528 - 41312495
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||| ||||||||||||||||||||||    
T  41312528 aaataagttaatggaccaaagcatgtattaagcc 41312495  T

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Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 34
Target Start/End: Complemental strand, 42246615 - 42246586
Alignment:
Q  5 aagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||    
T  42246615 aagttaagggaccaaagcatgtattaagcc 42246586  T

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Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 42772466 - 42772429
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaaaa 38  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  42772466 aaataagttaaggaaccaaagcatgtattaagctaaaa 42772429  T

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Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 2305568 - 2305536
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  2305568 aaataagttaagggatcaaagcatgtattaagc 2305536  T

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Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 37867784 - 37867748
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaaa 37  Q
    ||||||||||||||||||||  |||||||||||||||    
T  37867784 aaataagttaagggaccaaatgatgtattaagccaaa 37867748  T

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Target: scaffold0178 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 2353 - 2386
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  2353 aaataagttaagggaccaaagcatgtattaagcc 2386  T

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Target: scaffold0178; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 1240 - 1202
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaaaaa 39  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  1240 aaataagttaagggatcaaaacatgtattaagccaaaaa 1202  T

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Target: scaffold0177 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 1783 - 1750
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  1783 aaataagttaagggaccaaagcatgtattaagcc 1750  T

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Target: scaffold0155 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 5197 - 5164
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  5197 aaataagttaagggaccaaagcatgtattaagcc 5164  T

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Target: scaffold0839 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 213 - 252
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaaaaaa 40  Q
    |||||||||||||||||||| |||||||||||||| ||||    
T  213 aaataagttaagggaccaaatcatgtattaagccataaaa 252  T

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Target: scaffold0839; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 53 - 20
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    |||||||||||||||||||| |||||||||||||    
T  53 aaataagttaagggaccaaatcatgtattaagcc 20  T

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Target: scaffold0038 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 25950 - 25919
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaag 32  Q
    ||||||||||||||||||||||||||||||||    
T  25950 aaataagttaagggaccaaagcatgtattaag 25919  T

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Target: scaffold0007 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 28346 - 28384
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagccaaaaa 39  Q
    ||||||||| |||||||||||||||||||||||| ||||    
T  28346 aaataagttgagggaccaaagcatgtattaagcctaaaa 28384  T

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Target: scaffold0649 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0649
Description:

Target: scaffold0649; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 3996 - 4029
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    ||||||||||||||||||||| ||||||||||||    
T  3996 aaataagttaagggaccaaagtatgtattaagcc 4029  T

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Target: scaffold0316 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 11859 - 11892
Alignment:
Q  1 aaataagttaagggaccaaagcatgtattaagcc 34  Q
    |||||||||||| |||||||||||||||||||||    
T  11859 aaataagttaagagaccaaagcatgtattaagcc 11892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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