View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1462_high_5 (Length: 261)
Name: NF1462_high_5
Description: NF1462
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1462_high_5 |
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Alignment Details
Target: chr1 (Bit Score: 162; Significance: 2e-86; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 86 - 251
Target Start/End: Original strand, 50242636 - 50242801
Alignment:
| Q |
86 |
ggagtaatatgtatgtggtttgagagaaaagttcaaaagacaatagcgaaagaatggcgggtcttatggtcttcctactcttgggcactccccaaacaaa |
185 |
Q |
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| T |
50242636 |
ggagtaatatgtatgtggtttgagagaaaagttcaaaagacaatagcgaaagaatggcgggtcttatggtcttcctactcttgggcactccccaaacaaa |
50242735 |
T |
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| Q |
186 |
cagaacattaccttcattttctcattccttcattcaacaacaactgtgtctgtgtctgtgtctctg |
251 |
Q |
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|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
50242736 |
cagaacattaccttcattttctcattccttaattcaacaacaactgtgtctgtgtctgtgtctctg |
50242801 |
T |
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