View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1462_low_7 (Length: 261)

Name: NF1462_low_7
Description: NF1462
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1462_low_7
NF1462_low_7
[»] chr4 (47 HSPs)
chr4 (13-256)||(33383884-33384128)
chr4 (13-251)||(51426616-51426856)
chr4 (13-255)||(955871-956113)
chr4 (13-173)||(1044380-1044538)
chr4 (13-173)||(9491118-9491278)
chr4 (13-173)||(56140524-56140684)
chr4 (13-172)||(44558728-44558887)
chr4 (13-168)||(37868107-37868262)
chr4 (13-172)||(39590402-39590561)
chr4 (13-172)||(49572736-49572894)
chr4 (13-251)||(34151693-34151932)
chr4 (10-172)||(4783722-4783881)
chr4 (13-172)||(6280937-6281096)
chr4 (33-172)||(21015838-21015977)
chr4 (13-172)||(34528244-34528403)
chr4 (33-172)||(28083825-28083964)
chr4 (50-172)||(49422206-49422328)
chr4 (33-172)||(40352435-40352574)
chr4 (33-172)||(41793463-41793602)
chr4 (11-170)||(51026132-51026290)
chr4 (33-172)||(55799364-55799503)
chr4 (33-170)||(36774809-36774946)
chr4 (11-147)||(43887577-43887712)
chr4 (33-147)||(6175976-6176090)
chr4 (33-147)||(49096178-49096292)
chr4 (196-255)||(44558918-44558977)
chr4 (199-256)||(9491014-9491071)
chr4 (8-140)||(4909896-4910028)
chr4 (7-67)||(21410205-21410265)
chr4 (14-169)||(37959568-37959713)
chr4 (33-147)||(22438379-22438493)
chr4 (8-130)||(47312927-47313049)
chr4 (99-170)||(9718977-9719048)
chr4 (11-62)||(21171257-21171307)
chr4 (196-256)||(34528430-34528495)
chr4 (218-255)||(55799267-55799304)
chr4 (207-255)||(241785-241833)
chr4 (11-59)||(24076809-24076857)
chr4 (196-227)||(49572674-49572705)
chr4 (46-170)||(2774736-2774861)
chr4 (218-255)||(6176175-6176212)
chr4 (218-255)||(21016037-21016074)
chr4 (219-256)||(37959459-37959496)
chr4 (199-256)||(39590305-39590361)
chr4 (218-255)||(41793662-41793699)
chr4 (218-255)||(49096056-49096093)
chr4 (11-139)||(8866830-8866958)
[»] chr5 (45 HSPs)
chr5 (13-173)||(25499721-25499881)
chr5 (13-256)||(34682336-34682579)
chr5 (13-172)||(541006-541162)
chr5 (32-172)||(5894-6034)
chr5 (13-173)||(41798898-41799059)
chr5 (42-173)||(35926466-35926597)
chr5 (15-172)||(41201809-41201966)
chr5 (13-172)||(8574801-8574959)
chr5 (13-172)||(11348336-11348494)
chr5 (14-255)||(18309809-18310040)
chr5 (33-172)||(19035337-19035476)
chr5 (33-147)||(27660039-27660153)
chr5 (32-172)||(11028839-11028979)
chr5 (32-172)||(38855546-38855686)
chr5 (33-169)||(8539381-8539516)
chr5 (13-127)||(30887256-30887371)
chr5 (11-170)||(36348708-36348866)
chr5 (33-170)||(7483857-7483994)
chr5 (15-141)||(1398685-1398811)
chr5 (33-170)||(1696461-1696598)
chr5 (33-170)||(41088233-41088370)
chr5 (196-251)||(25499631-25499686)
chr5 (33-172)||(30710995-30711133)
chr5 (32-175)||(6791814-6791963)
chr5 (35-170)||(1973095-1973230)
chr5 (15-172)||(3602994-3603140)
chr5 (8-170)||(23190679-23190841)
chr5 (101-170)||(20199996-20200065)
chr5 (108-170)||(40937159-40937221)
chr5 (11-68)||(7401807-7401864)
chr5 (196-255)||(41201996-41202054)
chr5 (13-67)||(35566967-35567021)
chr5 (199-256)||(541205-541261)
chr5 (199-256)||(1398913-1398969)
chr5 (196-255)||(30710912-30710970)
chr5 (218-256)||(6094-6132)
chr5 (218-256)||(8575019-8575057)
chr5 (13-59)||(31239720-31239766)
chr5 (37-67)||(40937253-40937283)
chr5 (219-256)||(3602886-3602923)
chr5 (218-255)||(8539281-8539318)
chr5 (218-255)||(19035536-19035573)
chr5 (218-255)||(27660238-27660275)
chr5 (218-255)||(30887172-30887209)
chr5 (219-256)||(41799128-41799165)
[»] chr2 (39 HSPs)
chr2 (13-255)||(8268501-8268743)
chr2 (13-172)||(43493119-43493278)
chr2 (13-172)||(41497552-41497711)
chr2 (13-172)||(35493176-35493335)
chr2 (13-172)||(40675817-40675975)
chr2 (13-256)||(23409253-23409495)
chr2 (13-256)||(19470037-19470283)
chr2 (13-173)||(3943024-3943185)
chr2 (13-173)||(16583427-16583588)
chr2 (13-173)||(34639147-34639307)
chr2 (32-170)||(23719444-23719582)
chr2 (32-170)||(24107116-24107254)
chr2 (13-173)||(29090655-29090816)
chr2 (13-172)||(23786204-23786364)
chr2 (32-172)||(28476902-28477042)
chr2 (33-172)||(3935962-3936101)
chr2 (33-172)||(17426200-17426339)
chr2 (33-172)||(22003236-22003375)
chr2 (32-170)||(5422057-5422195)
chr2 (32-172)||(39798541-39798681)
chr2 (33-162)||(10358896-10359025)
chr2 (33-147)||(43984161-43984275)
chr2 (33-170)||(34520065-34520202)
chr2 (199-255)||(43493012-43493068)
chr2 (11-170)||(37311041-37311199)
chr2 (15-167)||(14181673-14181815)
chr2 (199-255)||(35493080-35493136)
chr2 (196-251)||(40676007-40676062)
chr2 (33-91)||(45435122-45435180)
chr2 (103-172)||(2917842-2917911)
chr2 (192-256)||(23786385-23786454)
chr2 (99-170)||(17537320-17537391)
chr2 (192-256)||(41497736-41497808)
chr2 (218-255)||(3936161-3936198)
chr2 (219-256)||(3942919-3942956)
chr2 (218-255)||(16583333-16583370)
chr2 (218-255)||(17426103-17426140)
chr2 (218-255)||(22003139-22003176)
chr2 (11-59)||(33405662-33405710)
[»] chr3 (68 HSPs)
chr3 (13-172)||(55267495-55267654)
chr3 (10-172)||(34645638-34645798)
chr3 (13-173)||(43478662-43478823)
chr3 (13-172)||(2267136-2267294)
chr3 (13-176)||(13894306-13894469)
chr3 (13-172)||(34691705-34691864)
chr3 (30-172)||(55205364-55205506)
chr3 (13-173)||(45098884-45099044)
chr3 (32-172)||(50998489-50998629)
chr3 (13-167)||(16484294-16484449)
chr3 (13-172)||(24700801-24700960)
chr3 (15-176)||(51693960-51694121)
chr3 (32-173)||(52567857-52567998)
chr3 (25-255)||(43571433-43571667)
chr3 (13-172)||(44490425-44490584)
chr3 (25-168)||(49217182-49217325)
chr3 (13-171)||(41805510-41805668)
chr3 (13-172)||(4002794-4002951)
chr3 (26-255)||(44223114-44223343)
chr3 (32-172)||(36136433-36136572)
chr3 (33-172)||(2645555-2645694)
chr3 (13-160)||(19440336-19440483)
chr3 (8-167)||(20374296-20374445)
chr3 (33-147)||(2950465-2950579)
chr3 (33-147)||(46406451-46406565)
chr3 (11-170)||(42321806-42321964)
chr3 (33-147)||(49138713-49138827)
chr3 (32-170)||(51017020-51017158)
chr3 (11-170)||(50457574-50457735)
chr3 (33-153)||(54391882-54392002)
chr3 (8-170)||(18441959-18442121)
chr3 (8-170)||(19487033-19487195)
chr3 (33-147)||(34051173-34051287)
chr3 (33-170)||(44929199-44929336)
chr3 (77-172)||(3493728-3493823)
chr3 (77-172)||(3497422-3497517)
chr3 (14-172)||(7247705-7247853)
chr3 (54-168)||(49275125-49275239)
chr3 (199-256)||(43478559-43478616)
chr3 (108-172)||(2430112-2430176)
chr3 (39-170)||(27096093-27096224)
chr3 (14-172)||(46345017-46345165)
chr3 (14-84)||(2432866-2432936)
chr3 (33-170)||(11377345-11377482)
chr3 (14-172)||(41579568-41579717)
chr3 (103-170)||(34470483-34470550)
chr3 (205-255)||(2430016-2430066)
chr3 (192-254)||(49217353-49217415)
chr3 (218-256)||(24701019-24701057)
chr3 (11-59)||(30194379-30194426)
chr3 (34-170)||(51011672-51011808)
chr3 (218-256)||(51694178-51694216)
chr3 (218-256)||(54391765-54391803)
chr3 (218-255)||(2645740-2645777)
chr3 (218-255)||(3493884-3493921)
chr3 (218-255)||(3497578-3497615)
chr3 (109-170)||(10051779-10051840)
chr3 (218-255)||(34051051-34051088)
chr3 (199-256)||(34691909-34691965)
chr3 (218-255)||(36136336-36136373)
chr3 (218-255)||(46406329-46406366)
chr3 (218-255)||(49138912-49138949)
chr3 (219-256)||(49611685-49611722)
chr3 (218-255)||(50998392-50998429)
chr3 (218-255)||(52568063-52568100)
chr3 (199-227)||(41805438-41805466)
chr3 (199-227)||(55205554-55205582)
chr3 (199-227)||(55267699-55267727)
[»] chr7 (45 HSPs)
chr7 (13-172)||(28112862-28113021)
chr7 (13-172)||(36392204-36392364)
chr7 (8-172)||(15309810-15309974)
chr7 (41-173)||(33603308-33603440)
chr7 (13-165)||(34142500-34142652)
chr7 (13-173)||(45361703-45361863)
chr7 (33-172)||(45257865-45258004)
chr7 (13-172)||(48194466-48194625)
chr7 (13-165)||(40590391-40590543)
chr7 (25-173)||(28977649-28977797)
chr7 (13-172)||(10524166-10524324)
chr7 (13-172)||(46596965-46597122)
chr7 (33-172)||(20566168-20566307)
chr7 (32-160)||(15070453-15070581)
chr7 (13-168)||(41623723-41623868)
chr7 (13-172)||(17840725-17840883)
chr7 (13-172)||(46860590-46860739)
chr7 (33-135)||(34139600-34139702)
chr7 (32-170)||(42503915-42504053)
chr7 (13-100)||(10225750-10225837)
chr7 (33-147)||(9365778-9365892)
chr7 (32-170)||(22292573-22292711)
chr7 (10-170)||(4231093-4231253)
chr7 (196-251)||(10225618-10225673)
chr7 (196-255)||(41623630-41623689)
chr7 (34-160)||(20876415-20876541)
chr7 (32-162)||(43349738-43349868)
chr7 (196-255)||(42683954-42684013)
chr7 (33-143)||(17184933-17185043)
chr7 (103-255)||(21185794-21185948)
chr7 (103-172)||(48272290-48272359)
chr7 (103-171)||(42684043-42684111)
chr7 (14-172)||(48314753-48314901)
chr7 (7-170)||(1640961-1641112)
chr7 (196-256)||(34142399-34142464)
chr7 (113-173)||(10225698-10225758)
chr7 (11-144)||(42736731-42736864)
chr7 (214-255)||(40590285-40590326)
chr7 (218-255)||(45361925-45361962)
chr7 (14-53)||(48272380-48272419)
chr7 (13-67)||(42684137-42684191)
chr7 (218-255)||(9365977-9366014)
chr7 (218-255)||(10524065-10524102)
chr7 (218-255)||(17840628-17840665)
chr7 (196-256)||(48194371-48194436)
[»] chr6 (27 HSPs)
chr6 (13-172)||(35019656-35019815)
chr6 (13-173)||(29076157-29076317)
chr6 (13-173)||(29109690-29109850)
chr6 (13-173)||(29111130-29111290)
chr6 (13-172)||(34801583-34801743)
chr6 (13-256)||(29068012-29068259)
chr6 (13-173)||(29083346-29083506)
chr6 (13-168)||(13616320-13616475)
chr6 (59-255)||(32026087-32026284)
chr6 (33-172)||(32691284-32691423)
chr6 (14-172)||(13404467-13404625)
chr6 (15-169)||(14124556-14124710)
chr6 (33-172)||(27641553-27641692)
chr6 (33-147)||(11693887-11694001)
chr6 (196-256)||(34801777-34801837)
chr6 (7-117)||(17126862-17126973)
chr6 (33-147)||(6206920-6207034)
chr6 (196-256)||(29083258-29083318)
chr6 (196-256)||(29109601-29109661)
chr6 (33-170)||(12398521-12398658)
chr6 (196-237)||(14124486-14124527)
chr6 (196-255)||(13616506-13616564)
chr6 (29-160)||(30763412-30763543)
chr6 (192-255)||(32691444-32691506)
chr6 (218-255)||(6206798-6206835)
chr6 (218-255)||(11693765-11693802)
chr6 (199-227)||(35019857-35019885)
[»] chr1 (54 HSPs)
chr1 (13-172)||(49924936-49925095)
chr1 (40-255)||(41803783-41804000)
chr1 (13-172)||(14172167-14172326)
chr1 (13-172)||(51271425-51271584)
chr1 (13-167)||(44598745-44598899)
chr1 (13-173)||(27485113-27485272)
chr1 (13-172)||(36911530-36911690)
chr1 (13-170)||(49398307-49398463)
chr1 (13-172)||(42570201-42570361)
chr1 (13-173)||(44336329-44336489)
chr1 (13-172)||(26633606-26633766)
chr1 (25-171)||(13148889-13149029)
chr1 (34-173)||(29760604-29760743)
chr1 (32-172)||(13633964-13634104)
chr1 (13-172)||(35524818-35524967)
chr1 (31-136)||(29437890-29437995)
chr1 (33-172)||(19161991-19162130)
chr1 (33-172)||(49428996-49429135)
chr1 (14-172)||(6437374-6437532)
chr1 (32-170)||(23344242-23344380)
chr1 (32-170)||(38043549-38043687)
chr1 (33-170)||(39855589-39855727)
chr1 (8-173)||(24362363-24362525)
chr1 (32-147)||(48228170-48228286)
chr1 (33-167)||(33285790-33285924)
chr1 (32-170)||(14440872-14441009)
chr1 (11-89)||(26497804-26497882)
chr1 (196-256)||(13974474-13974534)
chr1 (101-172)||(18974965-18975036)
chr1 (11-170)||(49260007-49260164)
chr1 (11-129)||(12789787-12789904)
chr1 (108-172)||(46141941-46142005)
chr1 (100-157)||(13285196-13285253)
chr1 (196-256)||(14172353-14172421)
chr1 (205-251)||(18974869-18974915)
chr1 (32-170)||(40531797-40531935)
chr1 (10-59)||(16530628-16530677)
chr1 (218-255)||(48228053-48228090)
chr1 (11-59)||(39063288-39063336)
chr1 (219-255)||(49398197-49398233)
chr1 (220-256)||(51271350-51271386)
chr1 (15-74)||(13287484-13287543)
chr1 (196-227)||(46142032-46142063)
chr1 (18-84)||(19260969-19261035)
chr1 (218-256)||(44336548-44336586)
chr1 (15-59)||(14771204-14771249)
chr1 (218-255)||(19162191-19162228)
chr1 (218-255)||(27485333-27485370)
chr1 (219-256)||(29760815-29760852)
chr1 (219-256)||(36911420-36911457)
chr1 (219-256)||(42570409-42570446)
chr1 (219-255)||(6437267-6437303)
chr1 (199-227)||(42570381-42570409)
chr1 (219-255)||(49428890-49428926)
[»] chr8 (33 HSPs)
chr8 (15-173)||(41276719-41276877)
chr8 (13-173)||(26455509-26455669)
chr8 (13-172)||(22550699-22550858)
chr8 (13-172)||(28168437-28168596)
chr8 (13-168)||(44052064-44052219)
chr8 (34-256)||(41855464-41855687)
chr8 (13-172)||(42605069-42605228)
chr8 (34-172)||(40703995-40704132)
chr8 (32-172)||(41016512-41016652)
chr8 (33-172)||(45066196-45066335)
chr8 (33-172)||(483915-484054)
chr8 (33-172)||(15030983-15031121)
chr8 (199-256)||(42604963-42605020)
chr8 (33-170)||(26488303-26488440)
chr8 (33-170)||(38032310-38032447)
chr8 (103-172)||(38872776-38872845)
chr8 (103-173)||(18438793-18438864)
chr8 (98-170)||(19241142-19241214)
chr8 (98-170)||(19314326-19314398)
chr8 (99-170)||(26488185-26488256)
chr8 (205-256)||(38872677-38872728)
chr8 (33-91)||(22519478-22519536)
chr8 (199-256)||(22550601-22550657)
chr8 (218-255)||(484114-484151)
chr8 (219-256)||(18438938-18438975)
chr8 (219-256)||(24862883-24862920)
chr8 (218-255)||(26455412-26455449)
chr8 (219-256)||(28168329-28168366)
chr8 (218-255)||(41016712-41016749)
chr8 (218-255)||(41276622-41276659)
chr8 (218-255)||(45066099-45066136)
chr8 (99-147)||(31170581-31170629)
chr8 (199-227)||(40703923-40703951)
[»] scaffold0176 (4 HSPs)
scaffold0176 (13-165)||(3425-3577)
scaffold0176 (33-135)||(525-627)
scaffold0176 (196-256)||(3324-3389)
scaffold0176 (218-256)||(394-432)
[»] scaffold0199 (1 HSPs)
scaffold0199 (13-172)||(10758-10916)
[»] scaffold0859 (1 HSPs)
scaffold0859 (9-170)||(2004-2165)
[»] scaffold0094 (1 HSPs)
scaffold0094 (33-172)||(39-178)
[»] scaffold0014 (1 HSPs)
scaffold0014 (33-172)||(84679-84818)
[»] scaffold0494 (1 HSPs)
scaffold0494 (32-172)||(5429-5569)
[»] scaffold0258 (1 HSPs)
scaffold0258 (11-68)||(10246-10303)
[»] scaffold0192 (3 HSPs)
scaffold0192 (103-172)||(16561-16630)
scaffold0192 (15-59)||(16483-16527)
scaffold0192 (219-255)||(16699-16735)
[»] scaffold0618 (1 HSPs)
scaffold0618 (14-84)||(3965-4035)
[»] scaffold0025 (1 HSPs)
scaffold0025 (11-59)||(154368-154417)


Alignment Details
Target: chr4 (Bit Score: 124; Significance: 7e-64; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 13 - 256
Target Start/End: Original strand, 33383884 - 33384128
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| |||||| | | |||||||||||| ||||||||||||||||||||| |||||    
T  33383884 tgttataagaagagaatagacataggagtttccaaaactccattgttatgttttttgatctcctaggtgcgattttgagcaatttcaagtcattccaagc 33383983  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt-taaannnnnnnnnnnnnnngttgaatttcgattatatag 211  Q
    |||||||||||||||||| ||||||||||||||||   |||||||||| |||||||||||  ||                ||| ||||||||||||||||    
T  33383984 caatttcaatcacaaaaacaagtaagttttttgaatcttattgcattgttgttttgtggtcgaattgtttgtttttttttgttaaatttcgattatatag 33384083  T
Q  212 gttttattgattttataatatgttaggataatttaggttagaatt 256  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||    
T  33384084 gttttattgattttatgatatgttaggatagtttaggttagaatt 33384128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 13 - 251
Target Start/End: Original strand, 51426616 - 51426856
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggt--tttcctaggtgcgaatttgagcaatttcaagtcatttcaa 110  Q
    ||||||||| | |||| |||||| |||||||||||||||||||||||||||||||  |  |||||||||||||| |||||||||||| |||||||| |||    
T  51426616 tgttataagtacagaacagacattggagtttccaaaactccattgttacgttttttttattttcctaggtgcgattttgagcaatttgaagtcattccaa 51426715  T
Q  111 gccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggttaaannnnnnnnnnnnnnngttgaatttcgattatata 210  Q
    |||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||  ||               ||| ||||| |||||||||    
T  51426716 gccaatttcaatcacaaaaacaagtaagttttttgaatcctattgcattgctgttttgtggtcgaattgttttttttttttgttaaattttgattatata 51426815  T
Q  211 ggttttattgattttataatatgttaggataatttaggtta 251  Q
    ||||||||||||||||| ||||||||||||| |||||||||    
T  51426816 ggttttattgattttatgatatgttaggatagtttaggtta 51426856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 13 - 255
Target Start/End: Original strand, 955871 - 956113
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||||| |||| |||||| |||||||| |||| | ||||||||||||||| | | |||||||||||| |||||||||||||||| |||| |||||    
T  955871 tgttataagaacagaacagacat-ggagtttctaaaaattcattgttacgttttttgatctcctaggtgcgattttgagcaatttcaagccattccaagc 955969  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt-taaannnnnnnnnnnnnnngttgaatttcgattatatag 211  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||  ||                ||| ||||||||||||||||    
T  955970 caatttcaatcacaaaaataagtaagttttttgaatcctattgcattgttgttttgtggtcgaattgtttgatatttgttgttaaatttcgattatatag 956069  T
Q  212 gttttattgattttataatatgttaggataatttaggttagaat 255  Q
    |||||||||||||||| ||||||||||||| |||||||||||||    
T  956070 gttttattgattttatgatatgttaggatagtttaggttagaat 956113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 13 - 173
Target Start/End: Complemental strand, 1044538 - 1044380
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||| | | ||| |||||||| ||||||| |||||||||||||||||||    
T  1044538 tgttataagaatagaacagacataggagtttccaaaactccattgttacgttttttgatctccaaggtgcgattttgagctatttcaagtcatttcaagc 1044439  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggtt 173  Q
    |||||||||||||||||| || |||||||||| ||   |||||||||| ||||||| ||||    
T  1044438 caatttcaatcacaaaaacaaataagtttttttaa--ttattgcattgttgttttgcggtt 1044380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 13 - 173
Target Start/End: Complemental strand, 9491278 - 9491118
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||||||| | | ||| |||||||| ||| ||| ||||||||||||| ||||     
T  9491278 tgttataagaacagaacagacataggagtttccaaaactccattgttacgttttttgatctccaaggtgcgattttaagctatttcaagtcattccaagt 9491179  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggtt 173  Q
    |||||||||||||||||||||||||||||||| ||  ||||||||||| | ||||| ||||    
T  9491178 caatttcaatcacaaaaataagtaagtttttttaatcctattgcattgttattttgcggtt 9491118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 13 - 173
Target Start/End: Complemental strand, 56140684 - 56140524
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||||||| | | ||| |||||||| ||||||  |||||||| |||| |||||    
T  56140684 tgttataagaacagaacagacataggagtttccaaaactccattgttacgttttttgatctccaaggtgcgattttgagttatttcaagccattccaagc 56140585  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggtt 173  Q
    |||||||||||||||||| ||||||||||||| ||  ||||||||||| ||||||| ||||    
T  56140584 caatttcaatcacaaaaacaagtaagtttttttaatcctattgcattgttgttttgcggtt 56140524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 13 - 172
Target Start/End: Original strand, 44558728 - 44558887
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||| | |||| ||||||||||||||||||||||||||| ||||||||||| || |||||||||| | ||| |||||||  |||||||| |||||    
T  44558728 tgttataagtacagaacagacataggagtttccaaaactccattattacgtttttgattctcctaggtgcaatttttagcaattcgaagtcattccaagc 44558827  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    |||||||||||||||||| ||||||||||||||||  ||||||||||| | |||||||||    
T  44558828 caatttcaatcacaaaaacaagtaagttttttgaatcctattgcattgttattttgtggt 44558887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 37868262 - 37868107
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||||| |||| ||| |||||||||||||||||||||||||||| |||||   | ||| |||||||| ||||||| |||||||||||||||||||    
T  37868262 tgttataagaacagaacagatataggagtttccaaaactccattgttacatttttttatctccaaggtgcgattttgagctatttcaagtcatttcaagc 37868163  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttg 168  Q
    |||||||||||||||||| ||||||||||||  ||  ||||||||||| |||||||    
T  37868162 caatttcaatcacaaaaacaagtaagtttttgtaatcctattgcattgttgttttg 37868107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 13 - 172
Target Start/End: Complemental strand, 39590561 - 39590402
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||||| |||| ||||||||||||||||||||||| |||||| |||||||  || |||| | ||||| |||||||||||| ||| |||| ||||     
T  39590561 tgttataagaacagaacagacataggagtttccaaaactcaattgttgcgttttttattctccttgctgcgattttgagcaatttgaagccattccaagt 39590462  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    |||||||||||||||||| ||||||||||| ||||| ||||||||||| |||||||||||    
T  39590461 caatttcaatcacaaaaacaagtaagttttctgaaccctattgcattgttgttttgtggt 39590402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 13 - 172
Target Start/End: Complemental strand, 49572894 - 49572736
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||| | |||| |||||||||| ||||||||||||||||||||||||||| | | || ||||||| | |||||||||||| |||||||| |||||    
T  49572894 tgttataagtacagaacagacataggaatttccaaaactccattgttacgttttttgatctcttaggtgcaattttgagcaattt-aagtcattccaagc 49572796  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    |||||||||||||||||| ||||||||||||||||   |||||||||| | |||||||||    
T  49572795 caatttcaatcacaaaaacaagtaagttttttgaatcatattgcattgttattttgtggt 49572736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 13 - 251
Target Start/End: Original strand, 34151693 - 34151932
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||| | |||| ||| || |||||||| ||||||||||||||| ||||||  || |||||| ||||| |||||||||||| |||||||| |||||    
T  34151693 tgttataagtacagaacagatatgggagtttctaaaactccattgttatgttttttattctcctagatgcgattttgagcaatttgaagtcattccaagc 34151792  T
Q  113 caatttcaatcacaaaaataagtaag-ttttttgaactctattgcattgctgttttgtggttaaannnnnnnnnnnnnnngttgaatttcgattatatag 211  Q
    |||||||||||||||||  ||||||| |||||||||  ||||||||||| |||||||||||  ||               ||| |||||| |||||||||    
T  34151793 caatttcaatcacaaaaccaagtaagtttttttgaatcctattgcattgttgttttgtggtcgaattgttttttttttttgttaaatttcaattatatag 34151892  T
Q  212 gttttattgattttataatatgttaggataatttaggtta 251  Q
    |||||||||||||||| ||||||||||||| |||| ||||    
T  34151893 gttttattgattttatgatatgttaggatagtttatgtta 34151932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 10 - 172
Target Start/End: Original strand, 4783722 - 4783881
Alignment:
Q  10 atctgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttca 109  Q
    ||||||| |||||| |||| | ||||||||||||||||||||||||||||| |||||||||| ||||| || ||| |||||||||||||||| |||| ||    
T  4783722 atctgttttaagaacagaacaaacataggagtttccaaaactccattgttaggtttttggttgtcctaagtacgattttgagcaatttcaagccattcca 4783821  T
Q  110 agccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    ||| ||||||||||||||||| ||||   |||||||||   |||||||||| |||||||||||    
T  4783822 agctaatttcaatcacaaaaacaagt---ttttttgaatcttattgcattgttgttttgtggt 4783881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 13 - 172
Target Start/End: Original strand, 6280937 - 6281096
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||||||| || ||| |||||||||||||||||| |||||||||||||||  || |||| ||||||| ||| | |||||| |||||||| ||| |    
T  6280937 tgttataagaatataaaagatataggagtttccaaaacttcattgttacgttttttattctccttggtgcgattttaaacaatttgaagtcattccaaac 6281036  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    |||||||||||||||||| ||||||||||||| ||   |||||||||| |||||||||||    
T  6281037 caatttcaatcacaaaaacaagtaagtttttttaatcatattgcattgttgttttgtggt 6281096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 33 - 172
Target Start/End: Original strand, 21015838 - 21015977
Alignment:
Q  33 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 132  Q
    ||||||||||||||||||||||||||| |||||||| || ||| |||||||| ||||||  |||| ||| |||| ||||||||||||||||||||||| |    
T  21015838 cataggagtttccaaaactccattgttgcgtttttgattatccaaggtgcgattttgagtcatttgaagccattccaagccaatttcaatcacaaaaaca 21015937  T
Q  133 agtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    |||||||||||||||  ||||||||||| || ||||||||    
T  21015938 agtaagttttttgaatcctattgcattgttgctttgtggt 21015977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 13 - 172
Target Start/End: Original strand, 34528244 - 34528403
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||||| | ||  |||||||||||||||||||||||||||||  ||||||| || |||| | ||||| |||||||||||| ||| |||| |||||    
T  34528244 tgttataagaacataacggacataggagtttccaaaactccattgttgtgtttttgattatccttgctgcgattttgagcaatttgaagccattccaagc 34528343  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    |||||||||||||||||| || |||||||| ||||  ||||||||||| |||||||||||    
T  34528344 caatttcaatcacaaaaacaaataagttttctgaatcctattgcattgttgttttgtggt 34528403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 33 - 172
Target Start/End: Complemental strand, 28083964 - 28083825
Alignment:
Q  33 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 132  Q
    ||||||||||||||||||||||||||| |||||||  || ||| |||||||| ||||||  |||| || ||||| ||||||||||||||||||||||| |    
T  28083964 cataggagtttccaaaactccattgttgcgttttttattatccaaggtgcgattttgagtcatttgaattcattccaagccaatttcaatcacaaaaaca 28083865  T
Q  133 agtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    |||||||||||||||  ||||||||||| || ||||||||    
T  28083864 agtaagttttttgaatcctattgcattgttgctttgtggt 28083825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 50 - 172
Target Start/End: Original strand, 49422206 - 49422328
Alignment:
Q  50 ctccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaataagtaagttttttgaact 149  Q
    |||||||||| ||||||| | | |||||||||||| ||| |||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||      
T  49422206 ctccattgttgcgttttttgatctcctaggtgcgattttcagcaatttcaagccattccaagccaatttcaatcacaaaaacaagtaagttttttgaatc 49422305  T
Q  150 ctattgcattgctgttttgtggt 172  Q
    ||||||||||| |||||||||||    
T  49422306 ctattgcattgttgttttgtggt 49422328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 33 - 172
Target Start/End: Original strand, 40352435 - 40352574
Alignment:
Q  33 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 132  Q
    ||||||||||||||||||||||||||| ||||||   || ||| |||||||| ||||||  |||| ||| |||| ||||||||||||||||||||||| |    
T  40352435 cataggagtttccaaaactccattgttgcgttttgaattatccaaggtgcgattttgagtcatttgaagccattacaagccaatttcaatcacaaaaaca 40352534  T
Q  133 agtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    ||||||||||||||| |||||||||||  || ||||||||    
T  40352535 agtaagttttttgaattctattgcattattgctttgtggt 40352574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 33 - 172
Target Start/End: Original strand, 41793463 - 41793602
Alignment:
Q  33 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 132  Q
    ||||||||||||||||||||||||||| |||||||  |||| | |||||||| ||||||  |||| ||| ||||  |||||||||| ||||||||||| |    
T  41793463 cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcgattttgagtcatttgaagccattagaagccaattttaatcacaaaaaca 41793562  T
Q  133 agtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    |||||||||||||||  ||||||||||| || ||||||||    
T  41793563 agtaagttttttgaatcctattgcattgttgctttgtggt 41793602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 11 - 170
Target Start/End: Original strand, 51026132 - 51026290
Alignment:
Q  11 tctgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaa 110  Q
    ||||||||| ||| |||| | ||||||||||||||||||||||||||||||||||| || ||||  |||||||  ||| |||||     ||||||| |||    
T  51026132 tctgttatatgaacagaaca-acataggagtttccaaaactccattgttacgttttcggatttctcaggtgcgtttttcagcaaacatcagtcattccaa 51026230  T
Q  111 gccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtg 170  Q
    ||||||||||| |||||||  ||||||||||||||||  ||||||||||||| |||||||    
T  51026231 gccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcattgctattttgtg 51026290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 33 - 172
Target Start/End: Complemental strand, 55799503 - 55799364
Alignment:
Q  33 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 132  Q
    ||||||||||||||||||||||||||| |||||||  |||| | |||||||| ||||||  |||| ||| ||||  |||||||||| ||||||||||| |    
T  55799503 cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcgattttgagtcatttgaagccattagaagccaattttaatcacaaaaaca 55799404  T
Q  133 agtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    |||||||||||||||  ||||||| ||| || ||||||||    
T  55799403 agtaagttttttgaatcctattgctttgttgctttgtggt 55799364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 33 - 170
Target Start/End: Original strand, 36774809 - 36774946
Alignment:
Q  33 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 132  Q
    ||||||||||||||||||||||||||||||||||| | || | ||||||||||||| |  ||    ||| |||| ||||| |||||||| |||||||  |    
T  36774809 cataggagtttccaaaactccattgttacgttttttgcttccataggtgcgaatttcacaaagcataagccattccaagcgaatttcaagcacaaaatca 36774908  T
Q  133 agtaagttttttgaactctattgcattgctgttttgtg 170  Q
    ||||||||||||||| |||||||||||||| |||||||    
T  36774909 agtaagttttttgaattctattgcattgctattttgtg 36774946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 11 - 147
Target Start/End: Original strand, 43887577 - 43887712
Alignment:
Q  11 tctgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaa 110  Q
    ||||||||| ||| |||| || ||||||||||||||||||||||||||||||||||| | || | ||||||||||||| |  ||    |||||||| |||    
T  43887577 tctgttatatgaacagaacag-cataggagtttccaaaactccattgttacgttttttgcttccataggtgcgaatttcacaaaccataagtcattccaa 43887675  T
Q  111 gccaatttcaatcacaaaaataagtaagttttttgaa 147  Q
    ||||||||||| |||||||  ||||||||||||||||    
T  43887676 gccaatttcaagcacaaaatcaagtaagttttttgaa 43887712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 33 - 147
Target Start/End: Original strand, 6175976 - 6176090
Alignment:
Q  33 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 132  Q
    ||||||||||||||||||||||||||| |||||||  ||||   |||||||| ||||||  |||| ||| ||||  |||||||||| ||||||||||| |    
T  6175976 cataggagtttccaaaactccattgttgcgtttttaatttttgaaggtgcgattttgagtcatttgaagccattagaagccaattttaatcacaaaaaca 6176075  T
Q  133 agtaagttttttgaa 147  Q
    |||||||||||||||    
T  6176076 agtaagttttttgaa 6176090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 33 - 147
Target Start/End: Complemental strand, 49096292 - 49096178
Alignment:
Q  33 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 132  Q
    ||||||||||||||||||||||||||| |||||||  ||||   |||||||| ||||||  |||| ||| ||||  |||||||||| ||||||||||| |    
T  49096292 cataggagtttccaaaactccattgttgcgtttttaatttttgaaggtgcgattttgagtcatttgaagccattagaagccaattttaatcacaaaaaca 49096193  T
Q  133 agtaagttttttgaa 147  Q
    |||||||||||||||    
T  49096192 agtaagttttttgaa 49096178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 196 - 255
Target Start/End: Original strand, 44558918 - 44558977
Alignment:
Q  196 aatttcgattatataggttttattgattttataatatgttaggataatttaggttagaat 255  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  44558918 aattttgattatataggttttattgattttatgatatgttaggatagtttaggttagaat 44558977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 199 - 256
Target Start/End: Complemental strand, 9491071 - 9491014
Alignment:
Q  199 ttcgattatataggttttattgattttataatatgttaggataatttaggttagaatt 256  Q
    ||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||    
T  9491071 ttcgattatatagattttattgattttatgatatgttaggatattttaggttagaatt 9491014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 140
Target Start/End: Original strand, 4909896 - 4910028
Alignment:
Q  8 tgatctgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcattt 107  Q
    |||||||||||||||| |||| || ||||| |||||||||||| |||||||| ||||||| |  ||| ||||||||| ||| | |||    ||||||||     
T  4909896 tgatctgttataagaacagaacaggcatagaagtttccaaaacaccattgttgcgttttttgaattcttaggtgcgattttcaccaagcataagtcattc 4909995  T
Q  108 caagccaatttcaatcacaaaaataagtaagtt 140  Q
    ||||| |||||||| |||||||  |||||||||    
T  4909996 caagctaatttcaagcacaaaatcaagtaagtt 4910028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 21410205 - 21410265
Alignment:
Q  7 ttgatctgttataagaatagaatagacataggagtttccaaaactccattgttacgttttt 67  Q
    ||||||||||||||||| | || |||||||||||||||||||||||||||||| |||||||    
T  21410205 ttgatctgttataagaacaaaacagacataggagtttccaaaactccattgttgcgttttt 21410265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 169
Target Start/End: Complemental strand, 37959713 - 37959568
Alignment:
Q  14 gttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagcc 113  Q
    |||||||||| | ||||||||| ||||||||||||||||||||||| || ||||  || || ||||||||| |||  ||          |||| ||||||    
T  37959713 gttataagaacataatagacatgggagtttccaaaactccattgttgcggttttcattctcttaggtgcgattttctgc----------cattccaagcc 37959624  T
Q  114 aatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgt 169  Q
    ||||||||||||||||| ||||||||||||||||  || |||||||| ||| ||||    
T  37959623 aatttcaatcacaaaaacaagtaagttttttgaatcctgttgcattgttgtattgt 37959568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 147
Target Start/End: Complemental strand, 22438493 - 22438379
Alignment:
Q  33 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 132  Q
    ||||| ||||||||||||||||||||||||||||| | || | ||||||||||||| |  ||    ||| ||||  ||| ||||||||| |||||||  |    
T  22438493 catagaagtttccaaaactccattgttacgttttttgcttccataggtgcgaatttcacaaaccataagccattcaaagacaatttcaagcacaaaatca 22438394  T
Q  133 agtaagttttttgaa 147  Q
    |||||||||||||||    
T  22438393 agtaagttttttgaa 22438379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 130
Target Start/End: Complemental strand, 47313049 - 47312927
Alignment:
Q  8 tgatctgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcattt 107  Q
    |||||||||||||||| | || || |||  || ||||||||||||||||||| || |||||| || | ||||||||| |||   |||  | ||||||||     
T  47313049 tgatctgttataagaacaaaacaggcatgagaatttccaaaactccattgttgcggttttgggttccataggtgcgattttttacaaggttaagtcattc 47312950  T
Q  108 caagccaatttcaatcacaaaaa 130  Q
    |||||||||||||| ||||||||    
T  47312949 caagccaatttcaaacacaaaaa 47312927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 170
Target Start/End: Complemental strand, 9719048 - 9718977
Alignment:
Q  99 aagtcatttcaagccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtg 170  Q
    ||||||||||||||||||||||| || ||||  ||||||||||||||||   |||| ||||| |||||||||    
T  9719048 aagtcatttcaagccaatttcaagcataaaatcaagtaagttttttgaatcttatttcattgttgttttgtg 9718977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 21171307 - 21171257
Alignment:
Q  11 tctgttataagaatagaatagacataggagtttccaaaactccattgttacg 62  Q
    ||||||||| |||||||||| | |||||||||||||||||||||||||||||    
T  21171307 tctgttatatgaatagaata-atataggagtttccaaaactccattgttacg 21171257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 256
Target Start/End: Original strand, 34528430 - 34528495
Alignment:
Q  196 aatttcgattatataggttt-----tattgattttataatatgttaggataatttaggttagaatt 256  Q
    |||||||||||||||||||      |||||||||||| ||||||||||||| ||||||||||||||    
T  34528430 aatttcgattatataggttcgattatattgattttatgatatgttaggatagtttaggttagaatt 34528495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 255
Target Start/End: Complemental strand, 55799304 - 55799267
Alignment:
Q  218 ttgattttataatatgttaggataatttaggttagaat 255  Q
    |||||||||| |||||||||||||||||||||||||||    
T  55799304 ttgattttatgatatgttaggataatttaggttagaat 55799267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 207 - 255
Target Start/End: Original strand, 241785 - 241833
Alignment:
Q  207 tataggttttattgattttataatatgttaggataatttaggttagaat 255  Q
    |||| |||||||||||||||| ||||||||||||| |||| ||||||||    
T  241785 tataagttttattgattttatgatatgttaggatagtttatgttagaat 241833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 24076857 - 24076809
Alignment:
Q  11 tctgttataagaatagaatagacataggagtttccaaaactccattgtt 59  Q
    ||||||||||||| | || |||||||||| |||||||||||||||||||    
T  24076857 tctgttataagaacataacagacataggaatttccaaaactccattgtt 24076809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 227
Target Start/End: Complemental strand, 49572705 - 49572674
Alignment:
Q  196 aatttcgattatataggttttattgattttat 227  Q
    ||||||||||||||||||||||||||||||||    
T  49572705 aatttcgattatataggttttattgattttat 49572674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 46 - 170
Target Start/End: Complemental strand, 2774861 - 2774736
Alignment:
Q  46 aaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaataagtaagtt-tttt 144  Q
    ||||||| | |||||||||||| | || | ||||||||||||| |  ||    ||| |||| |||||||||||||| |||||||  ||||||||| ||||    
T  2774861 aaaactctactgttacgttttttgcttccataggtgcgaatttcacaaaccataagccattccaagccaatttcaagcacaaaatcaagtaagttttttt 2774762  T
Q  145 gaactctattgcattgctgttttgtg 170  Q
    |||  ||||||| ||||| |||||||    
T  2774761 gaatcctattgcgttgctattttgtg 2774736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 255
Target Start/End: Original strand, 6176175 - 6176212
Alignment:
Q  218 ttgattttataatatgttaggataatttaggttagaat 255  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  6176175 ttgattttatgatatgttaggatagtttaggttagaat 6176212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 255
Target Start/End: Original strand, 21016037 - 21016074
Alignment:
Q  218 ttgattttataatatgttaggataatttaggttagaat 255  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  21016037 ttgattttatgatatgttaggatagtttaggttagaat 21016074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 256
Target Start/End: Complemental strand, 37959496 - 37959459
Alignment:
Q  219 tgattttataatatgttaggataatttaggttagaatt 256  Q
    ||||||||| ||||||||||||| ||||||||||||||    
T  37959496 tgattttatgatatgttaggatagtttaggttagaatt 37959459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 199 - 256
Target Start/End: Complemental strand, 39590361 - 39590305
Alignment:
Q  199 ttcgattatataggttttattgattttataatatgttaggataatttaggttagaatt 256  Q
    ||||||||||| | |||||| |||||||| ||||||||||||| | ||||||||||||    
T  39590361 ttcgattatattgattttat-gattttatgatatgttaggatagtataggttagaatt 39590305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 255
Target Start/End: Original strand, 41793662 - 41793699
Alignment:
Q  218 ttgattttataatatgttaggataatttaggttagaat 255  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  41793662 ttgattttatgatatgttaggatagtttaggttagaat 41793699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 255
Target Start/End: Complemental strand, 49096093 - 49096056
Alignment:
Q  218 ttgattttataatatgttaggataatttaggttagaat 255  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  49096093 ttgattttatgatatgttaggatagtttaggttagaat 49096056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 139
Target Start/End: Original strand, 8866830 - 8866958
Alignment:
Q  11 tctgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaa 110  Q
    ||||||||||||| | || | |||||||| | ||||||||||||||||| || |||||  || | ||||||||| |||   |||  | |||||||| |||    
T  8866830 tctgttataagaacaaaacaaacataggaatgtccaaaactccattgttgcggttttgagttccataggtgcgattttctccaagcttaagtcattccaa 8866929  T
Q  111 gccaatttcaatcacaaaaataagtaagt 139  Q
     |||||| ||| |||||||  ||||||||    
T  8866930 accaattacaaacacaaaatcaagtaagt 8866958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 113; Significance: 3e-57; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 13 - 173
Target Start/End: Complemental strand, 25499881 - 25499721
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||| ||||| | | |||||||||||| ||||||||||||||||||||| |||||    
T  25499881 tgttataagaacagaacagacataggagtttccaaaactccattgttacattttttgatctcctaggtgcgattttgagcaatttcaagtcattacaagc 25499782  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggtt 173  Q
    |||||||||||||||||| ||||||||||||||||  ||||||||||| ||||||||||||    
T  25499781 caatttcaatcacaaaaacaagtaagttttttgaatcctattgcattgttgttttgtggtt 25499721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 13 - 256
Target Start/End: Original strand, 34682336 - 34682579
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||| | |||  ||||||| ||||||||||||||||||||||||||||||  || |||||||||||| |||||||||||| |||||||| ||||     
T  34682336 tgttataagtacagaccagacatatgagtttccaaaactccattgttacgttttttattctcctaggtgcgattttgagcaatttgaagtcattccaagt 34682435  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggttaaannnnnnnnnnnnnnngttgaatttcgattatatagg 212  Q
     |||||||||||||| || |||||||||||||||| |||||||||||| |||||||||||  ||               ||| |||||||||||||||||    
T  34682436 taatttcaatcacaagaacaagtaagttttttgaattctattgcattgttgttttgtggtcgaattgttttttttttttgttaaatttcgattatatagg 34682535  T
Q  213 ttttattgattttataatatgttaggataatttaggttagaatt 256  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||    
T  34682536 ttttattgattttatgatatgttaggatagtttaggttagaatt 34682579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 13 - 172
Target Start/End: Original strand, 541006 - 541162
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||||| |||| |||||||||||||||||||||||| ||||| |||||||  || ||||   ||| | |||||||||||| |||||||| |||||    
T  541006 tgttataagaacagaacagacataggagtttccaaaactcccttgttgcgttttttattctcct---tgctattttgagcaatttgaagtcattccaagc 541102  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    |||||||||||||||||| ||||||||||| ||||  ||||||||||| |||||||||||    
T  541103 caatttcaatcacaaaaacaagtaagttttctgaatcctattgcattgttgttttgtggt 541162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 32 - 172
Target Start/End: Original strand, 5894 - 6034
Alignment:
Q  32 acataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaat 131  Q
    |||||||||||||||||||||||||||| |||||||| || ||| |||||||| ||||||  |||| ||| |||| |||||||||||||||||||||||     
T  5894 acataggagtttccaaaactccattgttgcgtttttgattatccaaggtgcgattttgagtcatttgaagccattccaagccaatttcaatcacaaaaac 5993  T
Q  132 aagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    ||||||||||||||||  ||||||||||| || ||||||||    
T  5994 aagtaagttttttgaatcctattgcattgttgctttgtggt 6034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 13 - 173
Target Start/End: Original strand, 41798898 - 41799059
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||||| | || | |||||||||||||||||||||||||||||||||||| | | ||| | |||||| ||||||| |||||||| |||| |||||    
T  41798898 tgttataagaacataacaaacataggagtttccaaaactccattgttacgttttttgatctccaatgtgcgattttgagctatttcaagacattccaagc 41798997  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactc-tattgcattgctgttttgtggtt 173  Q
    |||||||||||||||||| |||||||||||||  | || |||||||||| ||||||| ||||    
T  41798998 caatttcaatcacaaaaacaagtaagttttttttaatcttattgcattgttgttttgcggtt 41799059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 42 - 173
Target Start/End: Original strand, 35926466 - 35926597
Alignment:
Q  42 ttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaataagtaagttt 141  Q
    |||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||| |||| ||||   |||||||||||||| | || |||||||    
T  35926466 ttccaaaactccattgttacgttttttgttctcctaggtgcgattttgagcaatttcaagccattccaagaacatttcaatcacaaagaaaaataagttt 35926565  T
Q  142 tttgaactctattgcattgctgttttgtggtt 173  Q
    ||||||  ||||||||||||||||||| ||||    
T  35926566 tttgaatcctattgcattgctgttttggggtt 35926597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 15 - 172
Target Start/End: Original strand, 41201809 - 41201966
Alignment:
Q  15 ttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagcca 114  Q
    ||||||||| | || |||||||| || || |||||||  |||||||||||||| |   ||||| || ||| |||||||||||||||| ||||| ||||||    
T  41201809 ttataagaacataacagacatagaagatttcaaaactttattgttacgttttttgagctcctacgtacgattttgagcaatttcaagccattttaagcca 41201908  T
Q  115 atttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    |||||||||||||||||||||||||||||| ||  ||||||||||| |||||||||||    
T  41201909 atttcaatcacaaaaataagtaagttttttaaatcctattgcattgttgttttgtggt 41201966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 13 - 172
Target Start/End: Original strand, 8574801 - 8574959
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||||||||||  | ||||||||||||||||||||||||||| ||||||   || ||| |||||||| ||||||  |||| ||| |||| |||||    
T  8574801 tgttataagaatagaactg-cataggagtttccaaaactccattgttgcgttttgaattatccaaggtgcgattttgagtcatttgaagccattacaagc 8574899  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    |||||||||||||||||| ||||||||||||||||   |||||||||| || ||||||||    
T  8574900 caatttcaatcacaaaaacaagtaagttttttgaatcttattgcattgttgctttgtggt 8574959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 13 - 172
Target Start/End: Complemental strand, 11348494 - 11348336
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||||| |||| || ||||||||||||||||||||||||||| |||||||| || ||| |||||||| ||||||  |||| |||  ||| |||||    
T  11348494 tgttataagaacagaacag-cataggagtttccaaaactccattgttgcgtttttgattatccaaggtgcgattttgagtcatttgaagctattccaagc 11348396  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    |||||||||||||||||| |||||||| |||| ||  ||||||||||| || ||||||||    
T  11348395 caatttcaatcacaaaaacaagtaagtgtttttaatcctattgcattgttgctttgtggt 11348336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 14 - 255
Target Start/End: Complemental strand, 18310040 - 18309809
Alignment:
Q  14 gttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagcc 113  Q
    |||||||||| | || |||||||||||||||||||||||||||||| |  ||||  || || ||||||||| |||  ||          |||| ||||||    
T  18310040 gttataagaacataacagacataggagtttccaaaactccattgttgcagttttcattctcttaggtgcgattttctgc----------cattccaagcc 18309951  T
Q  114 aatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggttaaannnnnnnnnnnnnnngttgaatttcgattatataggt 213  Q
    ||||||||||||||||| ||||||||||||||||  ||||||||||| |||||||||||  ||               ||| ||||||||||||||||||    
T  18309950 aatttcaatcacaaaaacaagtaagttttttgaatcctattgcattgttgttttgtggtcgaattgtttgttttttttgttaaatttcgattatataggt 18309851  T
Q  214 tttattgattttataatatgttaggataatttaggttagaat 255  Q
    |||||||||||||| ||||||||||||| |||||||||||||    
T  18309850 tttattgattttatgatatgttaggatagtttaggttagaat 18309809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 33 - 172
Target Start/End: Original strand, 19035337 - 19035476
Alignment:
Q  33 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 132  Q
    ||||||||||||||||||||||||||| |||||||  |||| | |||||||| ||||||  |||| ||| ||||  |||||||||| ||||||||||| |    
T  19035337 cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcgattttgagtcatttgaagccattagaagccaattttaatcacaaaaaca 19035436  T
Q  133 agtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    |||||||||||||||  ||||||||||| || ||||||||    
T  19035437 agtaagttttttgaatcctattgcattgttgctttgtggt 19035476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 33 - 147
Target Start/End: Original strand, 27660039 - 27660153
Alignment:
Q  33 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 132  Q
    ||||||||||||||||||||||||||| |||||||  || ||| |||||||| ||||||  |||| ||| |||| ||||||||||||||||||||||| |    
T  27660039 cataggagtttccaaaactccattgttgcgtttttaattatccaaggtgcgattttgagtcatttgaagccattacaagccaatttcaatcacaaaaaca 27660138  T
Q  133 agtaagttttttgaa 147  Q
    |||||||||||||||    
T  27660139 agtaagttttttgaa 27660153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 32 - 172
Target Start/End: Complemental strand, 11028979 - 11028839
Alignment:
Q  32 acataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaat 131  Q
    |||||||||||||||||||||||||||| ||||||||  | ||  || ||||| || ||   |||| |||||||| |||||||||||||||||||||||     
T  11028979 acataggagtttccaaaactccattgttgcgtttttgagtatcaaagttgcgatttcgaatcattttaagtcattacaagccaatttcaatcacaaaaac 11028880  T
Q  132 aagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    ||||||||||||||||  ||||||||||| || ||||||||    
T  11028879 aagtaagttttttgaatcctattgcattgttgctttgtggt 11028839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 32 - 172
Target Start/End: Complemental strand, 38855686 - 38855546
Alignment:
Q  32 acataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaat 131  Q
    |||||||||||||||||||||||||||| ||||||||  | ||  || ||||| |||||   |||| ||| |||| |||||||||||||||||||||||     
T  38855686 acataggagtttccaaaactccattgttgcgtttttgagtatcaaagttgcgattttgaatcatttgaagccattacaagccaatttcaatcacaaaaac 38855587  T
Q  132 aagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    ||||||||||||||||  ||||||||||| || ||||||||    
T  38855586 aagtaagttttttgaatcctattgcattgttgctttgtggt 38855546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 33 - 169
Target Start/End: Complemental strand, 8539516 - 8539381
Alignment:
Q  33 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 132  Q
    ||||||||||||||||||||||||||| |||||||  || ||| | |||||| ||||||  |||| |||||||| ||| |||||| |||||||||||| |    
T  8539516 cataggagtttccaaaactccattgttgcgtttttt-ttatccaatgtgcgattttgagtcatttgaagtcattccaaaccaattccaatcacaaaaaca 8539418  T
Q  133 agtaagttttttgaactctattgcattgctgttttgt 169  Q
    |||||||||||||||  ||||||||||| || |||||    
T  8539417 agtaagttttttgaatcctattgcattgttgctttgt 8539381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 127
Target Start/End: Complemental strand, 30887371 - 30887256
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||||| | || |||||||||||||||||||||||||||||||||||||| | | ||| | |||||| ||||||| |||||||| |||| |||||    
T  30887371 tgttataagaacataacagacataggagtttccaaaactccattgttacgttttttgatctccaatgtgcgattttgagctatttcaagccattccaagc 30887272  T
Q  113 caa-tttcaatcacaa 127  Q
    ||| ||||||||||||    
T  30887271 caattttcaatcacaa 30887256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 170
Target Start/End: Original strand, 36348708 - 36348866
Alignment:
Q  11 tctgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaa 110  Q
    ||||||||| ||| |||| || ||||||||||||||||||||||||||||||||||| | || | ||| || |||||| |  ||    || ||||| |||    
T  36348708 tctgttatatgaacagaacag-cataggagtttccaaaactccattgttacgttttttgcttccatagatgtgaatttcacaaagcataaatcattccaa 36348806  T
Q  111 gccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtg 170  Q
    ||||||||||| |||||||  |||||||||||||||| |||||||||||||| |||||||    
T  36348807 gccaatttcaagcacaaaatcaagtaagttttttgaattctattgcattgctattttgtg 36348866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 33 - 170
Target Start/End: Original strand, 7483857 - 7483994
Alignment:
Q  33 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 132  Q
    ||||||||||||||||||||||||||||||||||| | || | ||||||||||||| |  ||    ||| ||||||||||||||||||| |||||||  |    
T  7483857 cataggagtttccaaaactccattgttacgttttttgcttccataggtgcgaatttcacaaaccataagccatttcaagccaatttcaagcacaaaatca 7483956  T
Q  133 agtaagttttttgaactctattgcattgctgttttgtg 170  Q
    |||||||||||| ||  ||||||| ||||| |||||||    
T  7483957 agtaagtttttttaatcctattgcgttgctattttgtg 7483994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 141
Target Start/End: Original strand, 1398685 - 1398811
Alignment:
Q  15 ttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagcca 114  Q
    ||||||||| ||||  ||||||||||||| ||||||||||||||||  ||||| | | |||||||||||| ||||||||||||||||  |||  ||| ||    
T  1398685 ttataagaacagaactgacataggagttttcaaaactccattgttatattttttgatctcctaggtgcgattttgagcaatttcaagcaattctaagtca 1398784  T
Q  115 atttcaatcacaaaaataagtaagttt 141  Q
    |||||||| | ||||| ||| ||||||    
T  1398785 atttcaataaaaaaaacaagcaagttt 1398811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 170
Target Start/End: Complemental strand, 1696598 - 1696461
Alignment:
Q  33 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 132  Q
    ||||||||||||||||||||| ||||||||||||| | || | ||||||||||||| |  ||    ||| |||| |||| ||||||||| |||||||  |    
T  1696598 cataggagtttccaaaactcctttgttacgttttttgcttccataggtgcgaatttcacgaagaataagccattccaagtcaatttcaagcacaaaatca 1696499  T
Q  133 agtaagttttttgaactctattgcattgctgttttgtg 170  Q
    | |||||||||||||  ||||||||||||| |||||||    
T  1696498 attaagttttttgaatcctattgcattgctattttgtg 1696461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 170
Target Start/End: Original strand, 41088233 - 41088370
Alignment:
Q  33 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 132  Q
    |||||||||| |||||||||||||||||||||||| | || | ||||||||||||| |  ||    ||| ||||  ||||||||||||| |||||||  |    
T  41088233 cataggagttaccaaaactccattgttacgttttttgcttccataggtgcgaatttcacaaaccataagccattctaagccaatttcaagcacaaaatca 41088332  T
Q  133 agtaagttttttgaactctattgcattgctgttttgtg 170  Q
    |||||||||||||||  ||||||| ||||| |||||||    
T  41088333 agtaagttttttgaatcctattgcgttgctattttgtg 41088370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 196 - 251
Target Start/End: Complemental strand, 25499686 - 25499631
Alignment:
Q  196 aatttcgattatataggttttattgattttataatatgttaggataatttaggtta 251  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  25499686 aatttcgattatataggttttattgattttatgatatgttaggatagtttaggtta 25499631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 33 - 172
Target Start/End: Complemental strand, 30711133 - 30710995
Alignment:
Q  33 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 132  Q
    ||||||||||||||||||||||   || ||||||   || ||| |||||||| ||||||  |||| ||| |||| ||||||||||| ||| ||||||| |    
T  30711133 cataggagtttccaaaactccaagtttgcgttttaa-ttatccaaggtgcgattttgagtcatttgaagccattacaagccaattttaataacaaaaaca 30711035  T
Q  133 agtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    ||||||||||||||| ||||||| |||| || ||||||||    
T  30711034 agtaagttttttgaattctattgtattgttgctttgtggt 30710995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 32 - 175
Target Start/End: Original strand, 6791814 - 6791963
Alignment:
Q  32 acataggagtttccaaaactccattgtta------cgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcac 125  Q
    |||||||||||||||||| ||||||||||      ||||||| | |||| ||||||||||||| |  ||    ||||||||  ||||||||||||| |||    
T  6791814 acataggagtttccaaaattccattgttattgttacgttttttgctttcataggtgcgaatttcataaagcataagtcattctaagccaatttcaagcac 6791913  T
Q  126 aaaaataagtaagttttttgaactctattgcattgctgttttgtggttaa 175  Q
    ||||  ||||||||||||||||  ||||||||||||| ||||||| ||||    
T  6791914 aaaatcaagtaagttttttgaatcctattgcattgctattttgtgattaa 6791963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 170
Target Start/End: Complemental strand, 1973230 - 1973095
Alignment:
Q  35 taggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaataag 134  Q
    ||||||||||||||||||||||||||||||||||| ||||  |||||||  ||| |||||      | |||| ||||| |||||||| |||||||  |||    
T  1973230 taggagtttccaaaactccattgttacgtttttggatttctcaggtgcgtttttcagcaaacatcggccattccaagctaatttcaagcacaaaatcaag 1973131  T
Q  135 taagttttttgaactctattgcattgctgttttgtg 170  Q
    ||| |||||||||  |||| |||||||| |||||||    
T  1973130 taaattttttgaatcctatggcattgctattttgtg 1973095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 172
Target Start/End: Complemental strand, 3603140 - 3602994
Alignment:
Q  15 ttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagcca 114  Q
    ||||||||| |||| |||||||||||||||||||||||||||||| || ||||  || || ||||||||| |||  ||          |||| |||||||    
T  3603140 ttataagaacagaacagacataggagtttccaaaactccattgttgcggttttcattctcttaggtgcgattttctgc----------cattccaagcca 3603051  T
Q  115 atttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    |||||||||||||||| ||||||||| ||||||   ||||||| || |||||||||||    
T  3603050 atttcaatcacaaaaacaagtaagttctttgaatcatattgca-tgttgttttgtggt 3602994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 170
Target Start/End: Complemental strand, 23190841 - 23190679
Alignment:
Q  8 tgatctgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcattt 107  Q
    |||||||||||||||| |||| ||||||| || ||||||||||||||||||| |  |||||  || | ||||||| | |||   |||  | ||| ||||     
T  23190841 tgatctgttataagaacagaacagacatacgaatttccaaaactccattgttgcagttttgagttccgtaggtgcaatttttgacaaggttaagccattc 23190742  T
Q  108 caagccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtg 170  Q
    |||||||||||||| ||||||| |||||||||| ||   |  ||||||||||| |||||||||    
T  23190741 caagccaatttcaagcacaaaattaagtaagttgttatcatcctattgcattgttgttttgtg 23190679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 101 - 170
Target Start/End: Complemental strand, 20200065 - 20199996
Alignment:
Q  101 gtcatttcaagccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtg 170  Q
    |||||| ||||||||||||||||||||||| |||||| |||||||||   |||||||||| |||||||||    
T  20200065 gtcattccaagccaatttcaatcacaaaaacaagtaaattttttgaatcttattgcattgttgttttgtg 20199996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 108 - 170
Target Start/End: Complemental strand, 40937221 - 40937159
Alignment:
Q  108 caagccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtg 170  Q
    |||||||||||||| |||||||  ||||||||||||||||  ||||||||||||| |||||||    
T  40937221 caagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcattgctattttgtg 40937159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 7401864 - 7401807
Alignment:
Q  11 tctgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttg 68  Q
    ||||||||||||| |||| |||||||||| ||||||||||||||||||| || |||||    
T  7401864 tctgttataagaacagaacagacataggaatttccaaaactccattgttgcggttttg 7401807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 255
Target Start/End: Original strand, 41201996 - 41202054
Alignment:
Q  196 aatttcgattatataggttttattgattttataatatgttaggataatttaggttagaat 255  Q
    ||||| |||||||||| |||||| |||||||| ||||||||||||| |||||||||||||    
T  41201996 aattttgattatatagattttat-gattttatgatatgttaggatagtttaggttagaat 41202054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 67
Target Start/End: Complemental strand, 35567021 - 35566967
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgttttt 67  Q
    ||||||||||| | || |||||||| ||||||||||||||||||||| |||||||    
T  35567021 tgttataagaacaaaacagacatagaagtttccaaaactccattgttgcgttttt 35566967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 199 - 256
Target Start/End: Original strand, 541205 - 541261
Alignment:
Q  199 ttcgattatataggttttattgattttataatatgttaggataatttaggttagaatt 256  Q
    ||||||||||| | |||||| |||||||| ||||||||||||| ||||||||||||||    
T  541205 ttcgattatattgattttat-gattttatgatatgttaggatagtttaggttagaatt 541261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 199 - 256
Target Start/End: Original strand, 1398913 - 1398969
Alignment:
Q  199 ttcgattatataggttttattgattttataatatgttaggataatttaggttagaatt 256  Q
    ||||||||||||||||||||||||||||| |||| ||| |||| |||| |||||||||    
T  1398913 ttcgattatataggttttattgattttatgatat-ttatgatagtttatgttagaatt 1398969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 255
Target Start/End: Complemental strand, 30710970 - 30710912
Alignment:
Q  196 aatttcgattatataggttttattgattttataatatgttaggataatttaggttagaat 255  Q
    |||||||||||||| | |||  |||||||||| ||||||||||||| |||||||||||||    
T  30710970 aatttcgattatattgatttg-ttgattttatgatatgttaggatagtttaggttagaat 30710912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 256
Target Start/End: Original strand, 6094 - 6132
Alignment:
Q  218 ttgattttataatatgttaggataatttaggttagaatt 256  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  6094 ttgattttatgatatgttaggatagtttaggttagaatt 6132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 256
Target Start/End: Original strand, 8575019 - 8575057
Alignment:
Q  218 ttgattttataatatgttaggataatttaggttagaatt 256  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  8575019 ttgattttatgatatgttaggatagtttaggttagaatt 8575057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 31239766 - 31239720
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgtt 59  Q
    ||||||||||| | || |||||||||| |||||||||||||||||||    
T  31239766 tgttataagaacataacagacataggaatttccaaaactccattgtt 31239720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 67
Target Start/End: Complemental strand, 40937283 - 40937253
Alignment:
Q  37 ggagtttccaaaactccattgttacgttttt 67  Q
    |||||||||||||||||||||||||||||||    
T  40937283 ggagtttccaaaactccattgttacgttttt 40937253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 256
Target Start/End: Complemental strand, 3602923 - 3602886
Alignment:
Q  219 tgattttataatatgttaggataatttaggttagaatt 256  Q
    ||||||||| ||||||||||||| ||||||||||||||    
T  3602923 tgattttattatatgttaggatagtttaggttagaatt 3602886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 255
Target Start/End: Complemental strand, 8539318 - 8539281
Alignment:
Q  218 ttgattttataatatgttaggataatttaggttagaat 255  Q
    |||||||||| ||||||||| |||||||||||||||||    
T  8539318 ttgattttatgatatgttagaataatttaggttagaat 8539281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 255
Target Start/End: Original strand, 19035536 - 19035573
Alignment:
Q  218 ttgattttataatatgttaggataatttaggttagaat 255  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  19035536 ttgattttatgatatgttaggatagtttaggttagaat 19035573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 255
Target Start/End: Original strand, 27660238 - 27660275
Alignment:
Q  218 ttgattttataatatgttaggataatttaggttagaat 255  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  27660238 ttgattttatgatatgttaggatagtttaggttagaat 27660275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 255
Target Start/End: Complemental strand, 30887209 - 30887172
Alignment:
Q  218 ttgattttataatatgttaggataatttaggttagaat 255  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  30887209 ttgattttatgatatgttaggatagtttaggttagaat 30887172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 256
Target Start/End: Original strand, 41799128 - 41799165
Alignment:
Q  219 tgattttataatatgttaggataatttaggttagaatt 256  Q
    ||||||||| ||||||||||||| ||||||||||||||    
T  41799128 tgattttatgatatgttaggatagtttaggttagaatt 41799165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 110; Significance: 2e-55; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 13 - 255
Target Start/End: Complemental strand, 8268743 - 8268501
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||||| | |||||||||| |||||||||||||||||||||| |||||||  || |||||| ||||| |||||||||||||||| ||||  ||||    
T  8268743 tgttataagaacaaaatagacatacgagtttccaaaactccattgttgcgttttttattctcctagatgcgattttgagcaatttcaagccattctaagc 8268644  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggttaaannnnnnnnnnnnnnngttgaatttcgattatatagg 212  Q
    |||||||||||||||||| |||||||||||||||| ||||||| |||| |||||||||| | ||               |||  ||||||||||||||||    
T  8268643 caatttcaatcacaaaaacaagtaagttttttgaattctattgaattgttgttttgtgggtgaatttttttttttgtttgttatatttcgattatatagg 8268544  T
Q  213 ttttattgattttataatatgttaggataatttaggttagaat 255  Q
    ||||||||||||||| ||||||||||||| |||||||||||||    
T  8268543 ttttattgattttatgatatgttaggatagtttaggttagaat 8268501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 13 - 172
Target Start/End: Complemental strand, 43493278 - 43493119
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||||| |||| ||||||||||||||| |||||||||||||||| ||||| | | |||||||||||| |||||||||||||||| |||| |||||    
T  43493278 tgttataagaacagaacagacataggagtttcaaaaactccattgttacattttttgatctcctaggtgcgattttgagcaatttcaagccattccaagc 43493179  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    |||||||||||||||||| ||| ||||||||||||  ||||||||||| |||||||||||    
T  43493178 caatttcaatcacaaaaacaagcaagttttttgaatcctattgcattgttgttttgtggt 43493119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 13 - 172
Target Start/End: Original strand, 41497552 - 41497711
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||||| |||| |||||||||| ||||||||||||||||||| |||||||  || |||| ||||||| |||||||||||| ||||||||  ||||    
T  41497552 tgttataagaacagaacagacataggattttccaaaactccattgttgcgttttttattctccttggtgcgattttgagcaatttgaagtcattcaaagc 41497651  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    |||||||||||||||||||||||||||||||||||  ||||||||| | |||||||||||    
T  41497652 caatttcaatcacaaaaataagtaagttttttgaatcctattgcatcgttgttttgtggt 41497711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 13 - 172
Target Start/End: Complemental strand, 35493335 - 35493176
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||||| |||| ||||||  |||||||||||||||||||||||||||||| | | ||| || || || ||||||||||||||||||||| |||||    
T  35493335 tgttataagaacagaacagacatgagagtttccaaaactccattgttacgttttttgatctccaagttgtgattttgagcaatttcaagtcattccaagc 35493236  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    |||||||||||||||||| ||||||||||||| ||  ||||||||||| |||||||||||    
T  35493235 caatttcaatcacaaaaacaagtaagtttttttaatcctattgcattgttgttttgtggt 35493176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 13 - 172
Target Start/End: Original strand, 40675817 - 40675975
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||| |||||| |||||| ||||||||||||||| ||||||||| |||||| || |||||| ||||| |||||||||||| |||||||| |||||    
T  40675817 tgttataagtatagaacagacattggagtttccaaaactgcattgttacatttttgattctcctag-tgcgattttgagcaatttgaagtcattccaagc 40675915  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    |||||||||||||||||| |||| |||||||||||  ||||||||||| |||||||||||    
T  40675916 caatttcaatcacaaaaacaagtcagttttttgaatcctattgcattgttgttttgtggt 40675975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 13 - 256
Target Start/End: Complemental strand, 23409495 - 23409253
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||| |  ||| ||||||||||||||||||||||||||||||||||||||  || |||||||||||| |||||||||||| ||| |||| |||||    
T  23409495 tgttataagtacggaacagacataggagtttccaaaactccattgttacgttttta-ttctcctaggtgcgattttgagcaatttgaagccattccaagc 23409397  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggttaaa--nnnnnnnnnnnnnnngttgaatttcgattatata 210  Q
    |||||||||||||  ||| ||||||||||||||||  ||||||||||| |||||||||||  ||                 ||| |||||||||||||||    
T  23409396 caatttcaatcac--aaacaagtaagttttttgaatcctattgcattgttgttttgtggtcgaattgttttttttttttttgttaaatttcgattatata 23409299  T
Q  211 ggttttattgattttataatatgttaggataatttaggttagaatt 256  Q
    ||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  23409298 ggtgttattgattttatgatatgttaggatagtttaggttagaatt 23409253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 13 - 256
Target Start/End: Original strand, 19470037 - 19470283
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||||| |||| | |||||||| ||||||||||||||||||||| |||||  ||||||||||||||| ||||||||||||||||||||| |||||    
T  19470037 tgttataagaacagaacaaacataggaatttccaaaactccattgttacatttttt-ttttcctaggtgcgattttgagcaatttcaagtcattccaagc 19470135  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggttaaa----nnnnnnnnnnnnnnngttgaatttcgattata 208  Q
    ||||| || | ||||||| ||||||||||||||||   |||||||||| |||||||||||  ||                   ||| |||||||||||||    
T  19470136 caattccatttacaaaaacaagtaagttttttgaatcatattgcattgttgttttgtggtcgaattgtttgttttttatttttgttaaatttcgattata 19470235  T
Q  209 taggttttattgattttataatatgttaggataatttaggttagaatt 256  Q
    ||||||||||||||||||| |||||||| |||| ||||||||||||||    
T  19470236 taggttttattgattttatgatatgttaagatagtttaggttagaatt 19470283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 13 - 173
Target Start/End: Complemental strand, 3943185 - 3943024
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttt-tcctaggtgcgaatttgagcaatttcaagtcatttcaag 111  Q
    ||||||||||| |||| |||||||||||||| |||||||||||||||||||||||  | | ||  |||||||| ||||||| ||||||||||||| ||||    
T  3943185 tgttataagaacagaacagacataggagttttcaaaactccattgttacgttttttttatctcaaaggtgcgattttgagctatttcaagtcattccaag 3943086  T
Q  112 ccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggtt 173  Q
    ||||||||||||||||||| |||||| |||||| ||  ||||||||||| ||||||| ||||    
T  3943085 ccaatttcaatcacaaaaacaagtaaatttttttaatcctattgcattgttgttttgcggtt 3943024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 13 - 173
Target Start/End: Complemental strand, 16583588 - 16583427
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||||| |||| ||||||||||||||||||||||||||| | ||| |||| | | ||| |||||||| ||||||| ||||||||||||| |||||    
T  16583588 tgttataagaacagaacagacataggagtttccaaaactccattatgacgctttttgatctccaaggtgcgattttgagctatttcaagtcattccaagc 16583489  T
Q  113 caatttcaatcacaaaaataagtaagtt-ttttgaactctattgcattgctgttttgtggtt 173  Q
    |||||||||||||||||| ||||||||| |||| ||  ||||||||||| ||||||| ||||    
T  16583488 caatttcaatcacaaaaacaagtaagttttttttaatcctattgcattgttgttttgcggtt 16583427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 13 - 173
Target Start/End: Complemental strand, 34639307 - 34639147
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||||| | || |||||||||||||||| ||||||||||||||| ||||| | | ||| |||||||| ||||||| |||||||| |||| |||||    
T  34639307 tgttataagaacaaaacagacataggagtttcctaaactccattgttacattttttgatctccaaggtgcgattttgagctatttcaagccattccaagc 34639208  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggtt 173  Q
    |||||||||| ||||||| ||||||||||||| || | |||| ||||| ||||||| ||||    
T  34639207 caatttcaataacaaaaacaagtaagtttttttaattttattacattgttgttttgcggtt 34639147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 23719444 - 23719582
Alignment:
Q  32 acataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaat 131  Q
    |||||||||||||||||||||||||||||||||||| | || | ||||||||||||| |  || |  |||||||| |||||||||||||| ||||||| |    
T  23719444 acataggagtttccaaaactccattgttacgttttttgcttccgtaggtgcgaatttcacaaagtataagtcattccaagccaatttcaagcacaaaatt 23719543  T
Q  132 aagtaagttttttgaactctattgcattgctgttttgtg 170  Q
    |||||||||||||||   ||||||||||||| |||||||    
T  23719544 aagtaagttttttgagtcctattgcattgctattttgtg 23719582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 24107116 - 24107254
Alignment:
Q  32 acataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaat 131  Q
    |||||||||||||||||||||||||||||||||||| | || | ||||||||||||| |  || |  |||||||| |||||||||||||| ||||||| |    
T  24107116 acataggagtttccaaaactccattgttacgttttttgcttccgtaggtgcgaatttcacaaagtataagtcattccaagccaatttcaagcacaaaatt 24107215  T
Q  132 aagtaagttttttgaactctattgcattgctgttttgtg 170  Q
    |||||||||||||||   ||||||||||||| |||||||    
T  24107216 aagtaagttttttgagtcctattgcattgctattttgtg 24107254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 173
Target Start/End: Original strand, 29090655 - 29090816
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttg-gttttcctaggtgcgaatttgagcaatttcaagtcatttcaag 111  Q
    ||||||||||| | || ||||||| ||||||||||||||||||||||||||||||  | | ||| | |||||| ||||||| |||||||  |||| ||||    
T  29090655 tgttataagaacaaaacagacatacgagtttccaaaactccattgttacgtttttttgatctccaatgtgcgattttgagctatttcaacccattccaag 29090754  T
Q  112 ccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggtt 173  Q
    |||||||||| |||||||| ||||||||||||| ||  ||||||||||| ||||||| ||||    
T  29090755 ccaatttcaaccacaaaaacaagtaagtttttttaatcctattgcattgttgttttgcggtt 29090816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 13 - 172
Target Start/End: Original strand, 23786204 - 23786364
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttt-tcctaggtgcgaatttgagcaatttcaagtcatttcaag 111  Q
    ||||||||||| | || | |||||||||||| ||||||||||||||| | |||||   || |||| | ||||| |||||||||||| |||||||| ||||    
T  23786204 tgttataagaacataacaaacataggagttttcaaaactccattgttgcatttttttattctccttgctgcgattttgagcaatttgaagtcattccaag 23786303  T
Q  112 ccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    ||||||||||||||||||| ||||||||||| | ||  ||||||||||| |||||||||||    
T  23786304 ccaatttcaatcacaaaaacaagtaagttttctaaatcctattgcattgttgttttgtggt 23786364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 32 - 172
Target Start/End: Complemental strand, 28477042 - 28476902
Alignment:
Q  32 acataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaat 131  Q
    |||||||||||||||||||||||||||| |||||||| || ||| || ||||| ||||||  |||| ||| |||| |||||||||||||||||||||||     
T  28477042 acataggagtttccaaaactccattgttgcgtttttgattatccaagttgcgattttgagtcatttgaagccattacaagccaatttcaatcacaaaaac 28476943  T
Q  132 aagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    ||||||||||| ||||  ||| ||||||| || ||||||||    
T  28476942 aagtaagttttgtgaatcctactgcattggtgctttgtggt 28476902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 33 - 172
Target Start/End: Original strand, 3935962 - 3936101
Alignment:
Q  33 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 132  Q
    ||||||||||||||||||||||||||| |||||||  |||| | |||||||| ||||||  |||| ||| ||||  |||||||||| ||||||||||| |    
T  3935962 cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcgattttgagtcatttgaagccattagaagccaattttaatcacaaaaaca 3936061  T
Q  133 agtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    |||||||||||||||  ||||||||||| || ||||||||    
T  3936062 agtaagttttttgaatcctattgcattgttgctttgtggt 3936101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 33 - 172
Target Start/End: Complemental strand, 17426339 - 17426200
Alignment:
Q  33 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 132  Q
    |||| |||||||||||||||||||||| |||||||  |||| | |||||||| ||||||  |||| ||| ||||  |||||||||| ||||||||||| |    
T  17426339 catatgagtttccaaaactccattgttgcgtttttaatttttcaaggtgcgattttgagtcatttgaagccattagaagccaattttaatcacaaaaaca 17426240  T
Q  133 agtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    |||||||||||||||  ||||||||||| || ||||||||    
T  17426239 agtaagttttttgaatcctattgcattgttgctttgtggt 17426200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 33 - 172
Target Start/End: Complemental strand, 22003375 - 22003236
Alignment:
Q  33 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 132  Q
    |||||||||||||||||||| |||||| ||||||   || ||| |||||||| ||||||  |||| ||| |||| ||||||||||||||||||||||| |    
T  22003375 cataggagtttccaaaactcaattgttgcgttttaaattatccaaggtgcgattttgagtcatttgaagccattacaagccaatttcaatcacaaaaaca 22003276  T
Q  133 agtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    |||||||||||||||  ||||||||||  || ||||||||    
T  22003275 agtaagttttttgaatcctattgcattcttgctttgtggt 22003236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 5422195 - 5422057
Alignment:
Q  32 acataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaat 131  Q
    |||||||||||| ||||||||||||||||||||||| | || | ||||||||||||| |  ||    ||| ||||||||||||||||||| |||||||      
T  5422195 acataggagttttcaaaactccattgttacgttttttgcttccataggtgcgaatttcacaaaccataagccatttcaagccaatttcaagcacaaaatc 5422096  T
Q  132 aagtaagttttttgaactctattgcattgctgttttgtg 170  Q
    |||||||||||||||| |||||||| ||||| |||||||    
T  5422095 aagtaagttttttgaattctattgcgttgctattttgtg 5422057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 32 - 172
Target Start/End: Original strand, 39798541 - 39798681
Alignment:
Q  32 acataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaat 131  Q
    |||||||||||| ||||||||||||||| ||||||||  | ||  || ||||| |||||   |||| ||| |||| |||||||||||||||||||||||     
T  39798541 acataggagttttcaaaactccattgttgcgtttttgagtatcaaagttgcgattttgaatcattttaagccattacaagccaatttcaatcacaaaaac 39798640  T
Q  132 aagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    ||||||||||||||||  ||||||||||| || ||||||||    
T  39798641 aagtaagttttttgaatcctattgcattgttgctttgtggt 39798681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 33 - 162
Target Start/End: Original strand, 10358896 - 10359025
Alignment:
Q  33 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 132  Q
    ||||||||||||||||||||||||||||||||||||| ||||  |||||||  ||| |||||     || |||| |||||||||||||| |||||||  |    
T  10358896 cataggagtttccaaaactccattgttacgtttttggatttctcaggtgcgtttttcagcaaacgtcagccattccaagccaatttcaaacacaaaatca 10358995  T
Q  133 agtaagttttttgaactctattgcattgct 162  Q
    |||||||||||||||  |||||||||||||    
T  10358996 agtaagttttttgaatcctattgcattgct 10359025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 33 - 147
Target Start/End: Complemental strand, 43984275 - 43984161
Alignment:
Q  33 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 132  Q
    ||||||||||||||||||||||||||| |||||||  ||||   |||||||| ||||||  |||| ||| ||||  |||||||||| ||||||||||| |    
T  43984275 cataggagtttccaaaactccattgttgcgtttttaatttttgaaggtgcgattttgagtcatttgaagccattagaagccaattttaatcacaaaaaca 43984176  T
Q  133 agtaagttttttgaa 147  Q
    |||||||||||||||    
T  43984175 agtaagttttttgaa 43984161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 33 - 170
Target Start/End: Original strand, 34520065 - 34520202
Alignment:
Q  33 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 132  Q
    ||||||||||||||||| ||||||||||||||||||| ||||  |||||||  ||| |||||     || |||| ||||| |||||||| |||||||  |    
T  34520065 cataggagtttccaaaaatccattgttacgtttttggatttctcaggtgcgtttttcagcaaacagcagccattccaagctaatttcaagcacaaaatca 34520164  T
Q  133 agtaagttttttgaactctattgcattgctgttttgtg 170  Q
    |||||||||||||||  ||||||||||||| |||||||    
T  34520165 agtaagttttttgaatcctattgcattgctattttgtg 34520202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 199 - 255
Target Start/End: Complemental strand, 43493068 - 43493012
Alignment:
Q  199 ttcgattatataggttttattgattttataatatgttaggataatttaggttagaat 255  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  43493068 ttcgattatataggttttattgattttatgatatgttaggataatttaggttagaat 43493012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 11 - 170
Target Start/End: Original strand, 37311041 - 37311199
Alignment:
Q  11 tctgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaa 110  Q
    ||||||||| ||| |||| | |||||||||||||||||| ||||||||||||||||| | || | ||||||||||||| |  ||    ||| || | |||    
T  37311041 tctgttatatgaacagaaca-acataggagtttccaaaaatccattgttacgttttttgcttccataggtgcgaatttcacaaagcataagccaatccaa 37311139  T
Q  111 gccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtg 170  Q
    ||||||||||| |||||||  ||||||||||| ||||  ||||||||||||| |||||||    
T  37311140 gccaatttcaagcacaaaatcaagtaagttttctgaatcctattgcattgctattttgtg 37311199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 167
Target Start/End: Complemental strand, 14181815 - 14181673
Alignment:
Q  15 ttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagcca 114  Q
    ||||||||| | || ||||||| ||||||||||||||| ||| |||||||||| | | ||| ||||||          |||||| || |||| |||||||    
T  14181815 ttataagaacataacagacataagagtttccaaaactctattattacgttttttgatatccaaggtgc----------aatttctagccattccaagcca 14181726  T
Q  115 atttcaatcacaaaaataagtaagttttttgaactctattgcattgctgtttt 167  Q
    |||||||||||||||| ||||||||||||||||  ||||||||||| ||||||    
T  14181725 atttcaatcacaaaaacaagtaagttttttgaatcctattgcattgttgtttt 14181673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 199 - 255
Target Start/End: Complemental strand, 35493136 - 35493080
Alignment:
Q  199 ttcgattatataggttttattgattttataatatgttaggataatttaggttagaat 255  Q
    |||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||    
T  35493136 ttcgattatataggttttcttgattttatgatatgttaggatagtttaggttagaat 35493080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 196 - 251
Target Start/End: Original strand, 40676007 - 40676062
Alignment:
Q  196 aatttcgattatataggttttattgattttataatatgttaggataatttaggtta 251  Q
    |||||||||||||||||||||||||||||||| |||| |||||||| |||||||||    
T  40676007 aatttcgattatataggttttattgattttatgatatcttaggatagtttaggtta 40676062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 91
Target Start/End: Complemental strand, 45435180 - 45435122
Alignment:
Q  33 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgag 91  Q
    ||||||||||||||||||||||||||| |||||||  || ||| |||||||| ||||||    
T  45435180 cataggagtttccaaaactccattgttgcgtttttaattatccaaggtgcgattttgag 45435122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 172
Target Start/End: Original strand, 2917842 - 2917911
Alignment:
Q  103 catttcaagccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    |||| |||||||||||||| |||||||| |||||| | |||||||  ||||| ||||| |||||||||||    
T  2917842 cattccaagccaatttcaagcacaaaaacaagtaaatgttttgaatcctattacattgttgttttgtggt 2917911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 256
Target Start/End: Original strand, 23786385 - 23786454
Alignment:
Q  192 gttgaatttcgattatataggttt-----tattgattttataatatgttaggataatttaggttagaatt 256  Q
    ||| |||||||||||||||||||      |||||||||||| ||||||||||||| ||||||||||||||    
T  23786385 gttaaatttcgattatataggttcgattatattgattttatgatatgttaggatagtttaggttagaatt 23786454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 99 - 170
Target Start/End: Original strand, 17537320 - 17537391
Alignment:
Q  99 aagtcatttcaagccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtg 170  Q
    |||||||| ||||| |||||||| |||||||  ||||||||||| ||||  ||||||||||||  |||||||    
T  17537320 aagtcattccaagctaatttcaagcacaaaatcaagtaagttttgtgaatcctattgcattgcaattttgtg 17537391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 192 - 256
Target Start/End: Original strand, 41497736 - 41497808
Alignment:
Q  192 gttgaatttcgattatataggttttattgattttataat--------atgttaggataatttaggttagaatt 256  Q
    ||| |||||| ||||||||||||||||||||||||| ||        ||||||||||||||||||||||||||    
T  41497736 gttaaatttcaattatataggttttattgattttatgattttatgatatgttaggataatttaggttagaatt 41497808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 255
Target Start/End: Original strand, 3936161 - 3936198
Alignment:
Q  218 ttgattttataatatgttaggataatttaggttagaat 255  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  3936161 ttgattttatgatatgttaggatagtttaggttagaat 3936198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 256
Target Start/End: Complemental strand, 3942956 - 3942919
Alignment:
Q  219 tgattttataatatgttaggataatttaggttagaatt 256  Q
    ||||||||| ||||||||||||| ||||||||||||||    
T  3942956 tgattttatgatatgttaggatagtttaggttagaatt 3942919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 255
Target Start/End: Complemental strand, 16583370 - 16583333
Alignment:
Q  218 ttgattttataatatgttaggataatttaggttagaat 255  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  16583370 ttgattttatgatatgttaggatagtttaggttagaat 16583333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 255
Target Start/End: Complemental strand, 17426140 - 17426103
Alignment:
Q  218 ttgattttataatatgttaggataatttaggttagaat 255  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  17426140 ttgattttatgatatgttaggatagtttaggttagaat 17426103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 255
Target Start/End: Complemental strand, 22003176 - 22003139
Alignment:
Q  218 ttgattttataatatgttaggataatttaggttagaat 255  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  22003176 ttgattttatgatatgttaggatagtttaggttagaat 22003139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 33405710 - 33405662
Alignment:
Q  11 tctgttataagaatagaatagacataggagtttccaaaactccattgtt 59  Q
    ||||||||||||| |  | | ||||||||||||||||||||||||||||    
T  33405710 tctgttataagaacattacaaacataggagtttccaaaactccattgtt 33405662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 104; Significance: 6e-52; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 13 - 172
Target Start/End: Original strand, 55267495 - 55267654
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||||||| || | |||||||||||||||||||||||||||| |||||||| || |||| ||||||| |||||||||||| |||||||| |||||    
T  55267495 tgttataagaatataacaaacataggagtttccaaaactccattgttgcgtttttgattctccttggtgcgattttgagcaatttgaagtcattccaagc 55267594  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    |||||||||||||||||| ||||||||||||||||  ||||||||||| |||||||||||    
T  55267595 caatttcaatcacaaaaacaagtaagttttttgaatcctattgcattgttgttttgtggt 55267654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 10 - 172
Target Start/End: Original strand, 34645638 - 34645798
Alignment:
Q  10 atctgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttca 109  Q
    |||||||||||||| | || ||||||||||||||||||| |||||||||||||||||||||| |||||||||||| || ||||||||||||| |||| ||    
T  34645638 atctgttataagaacataacagacataggagtttccaaa-ctccattgttacgtttttggttctcctaggtgcgatttggagcaatttcaagccattcca 34645736  T
Q  110 agccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    |||||||||| |||||||||| ||||||||||||||||  ||| || |||| |||||||||||    
T  34645737 agccaatttcgatcacaaaaacaagtaagttttttgaatccta-tgtattgttgttttgtggt 34645798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 13 - 173
Target Start/End: Complemental strand, 43478823 - 43478662
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||||||| | | ||| |||||||| ||||||| |||||||| |||| |||||    
T  43478823 tgttataagaacagaacagacataggagtttccaaaactccattgttacgttttttgatctccaaggtgcgattttgagctatttcaagccattccaagc 43478724  T
Q  113 caatttcaatcacaaaaataagtaagtt-ttttgaactctattgcattgctgttttgtggtt 173  Q
    |||||||||||||||||| ||||||||| |||| ||  ||||||||||| ||||||| ||||    
T  43478723 caatttcaatcacaaaaacaagtaagttttttttaatcctattgcattgttgttttgcggtt 43478662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 13 - 172
Target Start/End: Original strand, 2267136 - 2267294
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||||| |||| || ||||||||||||||||||||||||||| |||||||| || ||| |||||||| ||||||  |||| |||||||| |||||    
T  2267136 tgttataagaacagaacag-cataggagtttccaaaactccattgttgcgtttttgattatccaaggtgcgattttgagtcatttgaagtcattccaagc 2267234  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    |||||||||||||||||| ||||||||||||||||  ||||||||||| || ||||||||    
T  2267235 caatttcaatcacaaaaacaagtaagttttttgaatcctattgcattgttgctttgtggt 2267294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 13 - 176
Target Start/End: Original strand, 13894306 - 13894469
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||| |||||| | | ||  |||||||| ||||||| ||||||||||||| |||||    
T  13894306 tgttataagaacagaacagacataggagtttccaaaactccattgttatgttttttgatctcgaaggtgcgattttgagctatttcaagtcattccaagc 13894405  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggttaaa 176  Q
    ||||||||||||| |||| ||||| ||||||| ||  ||||||||||| ||||||| |||||||    
T  13894406 caatttcaatcaccaaaacaagtaggtttttttaatcctattgcattgttgttttgcggttaaa 13894469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 13 - 172
Target Start/End: Original strand, 34691705 - 34691864
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||||| |||| ||||||| |||||||||||||||||||||| |||||||| || |||| | ||||| |||||||||||| |||||||| |||||    
T  34691705 tgttataagaacagaacagacatatgagtttccaaaactccattgttgcgtttttgattctccttgctgcgattttgagcaatttgaagtcattccaagc 34691804  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
     ||||||||||||||||| |||||||| || ||||  ||||||||||| |||||||||||    
T  34691805 taatttcaatcacaaaaacaagtaagtattctgaatcctattgcattgttgttttgtggt 34691864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 55205364 - 55205506
Alignment:
Q  30 agacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaa 129  Q
    ||||||||||||||||| |||||||||||| |||||||  || |||| ||||||| |||||||||||| |||||||| ||||||||||| ||||||||||    
T  55205364 agacataggagtttccataactccattgttgcgttttttattctccttggtgcgattttgagcaatttgaagtcattccaagccaattttaatcacaaaa 55205463  T
Q  130 ataagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    | ||||||||||||||||  ||||||||||| |||||||||||    
T  55205464 acaagtaagttttttgaatcctattgcattgttgttttgtggt 55205506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 13 - 173
Target Start/End: Original strand, 45098884 - 45099044
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||||| | || | | |||||||||||||||||||||||||||||||||| | | ||||| |||||| ||| |||||||||||| |||| ||||     
T  45098884 tgttataagaacaaaaaaaatataggagtttccaaaactccattgttacgttttttgatctcctatgtgcgattttcagcaatttcaagccattccaagt 45098983  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggtt 173  Q
    |||||| ||||||||||| ||||||||||||||||  ||||||||||| ||||||||||||    
T  45098984 caattttaatcacaaaaacaagtaagttttttgaatcctattgcattgttgttttgtggtt 45099044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 32 - 172
Target Start/End: Complemental strand, 50998629 - 50998489
Alignment:
Q  32 acataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaat 131  Q
    |||||||||||||||||||||||||||| |||||||| || ||| |||||||| ||||||  |||| |||||||| |||||||||||||||||||||||     
T  50998629 acataggagtttccaaaactccattgttgcgtttttgattatccaaggtgcgattttgagtcatttgaagtcattccaagccaatttcaatcacaaaaac 50998530  T
Q  132 aagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    ||||||||||||||||  ||||||||||| || ||||||||    
T  50998529 aagtaagttttttgaatcctattgcattgttgctttgtggt 50998489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 13 - 167
Target Start/End: Complemental strand, 16484449 - 16484294
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||||| |||| ||||||||||||||| |||||||||||||||||||||| | | ||| |||||||| ||||||| ||||||||||||| |||||    
T  16484449 tgttataagaacagaacagacataggagtttcaaaaactccattgttacgttttttgatctccaaggtgcgattttgagctatttcaagtcattccaagc 16484350  T
Q  113 caatttcaatcacaaaaataag-taagttttttgaactctattgcattgctgtttt 167  Q
    |||||||||| ||||||| ||| |||||||||| ||  ||||||||||| ||||||    
T  16484349 caatttcaataacaaaaacaagttaagtttttttaatcctattgcattgttgtttt 16484294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 13 - 172
Target Start/End: Original strand, 24700801 - 24700960
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||||| | || | ||||| |||||||||||||||||||||| |||||||  || ||| |||||||| ||||||||||||||||||||| |||||    
T  24700801 tgttataagaacataacacacatatgagtttccaaaactccattgttgcgttttttcttctccaaggtgcgattttgagcaatttcaagtcattccaagc 24700900  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    ||| |||||||| ||||| ||||||||||||||||   |||||||||| |||||||||||    
T  24700901 caaattcaatcaaaaaaacaagtaagttttttgaatcttattgcattgttgttttgtggt 24700960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 15 - 176
Target Start/End: Original strand, 51693960 - 51694121
Alignment:
Q  15 ttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagcca 114  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||| |||||   | ||| |||||||| ||||||| ||||||||||||| |||| ||    
T  51693960 ttataagaatagaacagacataggagttttcaaaactccattgttacattttttaatctccaaggtgcgattttgagctatttcaagtcattccaagtca 51694059  T
Q  115 atttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggttaaa 176  Q
    |||||||||||||||| ||||||||||||  ||   |||||||||| ||||||| |||||||    
T  51694060 atttcaatcacaaaaacaagtaagtttttctaatcttattgcattgttgttttgcggttaaa 51694121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 32 - 173
Target Start/End: Original strand, 52567857 - 52567998
Alignment:
Q  32 acataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaat 131  Q
    |||||||||||||||||||||||||||| |||||||  || |||| ||||||| | |||||||||| |||||||| |||| ||||||||||||||||||     
T  52567857 acataggagtttccaaaactccattgttgcgttttttattctccttggtgcgattgtgagcaatttgaagtcattccaagtcaatttcaatcacaaaaac 52567956  T
Q  132 aagtaagttttttgaactctattgcattgctgttttgtggtt 173  Q
    ||||||||||||||||   |||||||||| ||||||||||||    
T  52567957 aagtaagttttttgaatcatattgcattgttgttttgtggtt 52567998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 25 - 255
Target Start/End: Complemental strand, 43571667 - 43571433
Alignment:
Q  25 agaatagacataggagtttccaaaactccattgttacgtttttggttttc--ctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaat 122  Q
    |||| |||||||||||||| |||||||||||||||||||||||  | |||  |||||||||| |||||||||||| ||| |||| |||| ||||||||||    
T  43571667 agaacagacataggagttttcaaaactccattgttacgttttttttattctcctaggtgcgattttgagcaatttgaagccattccaagtcaatttcaat 43571568  T
Q  123 cacaaaaataagtaagttttttgaactctattgcattgctgttttgtggttaaa--nnnnnnnnnnnnnnngttgaatttcgattatataggttttattg 220  Q
    |||| ||| ||||||||||||||||  ||||||||||| |||||||||||  ||                 ||| |||||| ||||||||||||||||||    
T  43571567 cacagaaacaagtaagttttttgaatcctattgcattgttgttttgtggtcgaattgtttgttttttttttgttaaatttcaattatataggttttattg 43571468  T
Q  221 attttataatatgttaggataatttaggttagaat 255  Q
    ||||||| || |||||||||| |||||||||||||    
T  43571467 attttatgatgtgttaggatagtttaggttagaat 43571433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 13 - 172
Target Start/End: Original strand, 44490425 - 44490584
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    |||||||||||  ||||||| |||| ||||||||||||| |||||||||||||||   | ||| | ||| || |||||||||||||||| |||| |||||    
T  44490425 tgttataagaacggaatagatatagcagtttccaaaacttcattgttacgtttttttatctccaatgtgtgattttgagcaatttcaagacattccaagc 44490524  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    |||||||||||||||||| ||||||||||||||||   |||||||||| |||||||||||    
T  44490525 caatttcaatcacaaaaacaagtaagttttttgaatcttattgcattgttgttttgtggt 44490584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 25 - 168
Target Start/End: Original strand, 49217182 - 49217325
Alignment:
Q  25 agaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatca 124  Q
    |||| |||||||||||||||||||||||||||||||||||||| | | | | |||||| | ||||||| ||||||||||||| ||| |||||||||||||    
T  49217182 agaacagacataggagtttccaaaactccattgttacgttttttgatcttcaaggtgcaattttgagctatttcaagtcattccaaaccaatttcaatca 49217281  T
Q  125 caaaaataagtaagttttttgaactctattgcattgctgttttg 168  Q
    |||||| ||||||||||||| ||  ||||||||||| |||||||    
T  49217282 caaaaacaagtaagtttttttaatcctattgcattgttgttttg 49217325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 13 - 171
Target Start/End: Complemental strand, 41805668 - 41805510
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||||| |||| ||||||| ||||||| ||||||||||||||  ||||||  || |||| ||||||| |||||||||||| |||||||| |||      
T  41805668 tgttataagaacagaacagacataagagtttctaaaactccattgttgtgttttttattctccttggtgcgattttgagcaatttgaagtcattccaaat 41805569  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtgg 171  Q
    |||||||||||||||||| ||||||||||||| ||  ||||||||||| ||||||||||    
T  41805568 caatttcaatcacaaaaacaagtaagtttttttaatcctattgcattgttgttttgtgg 41805510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 13 - 172
Target Start/End: Original strand, 4002794 - 4002951
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||||| |||| || ||||||||||||||||||||||||||| |||||||| || ||| |||||||| ||||||  |||| |||| ||| |||||    
T  4002794 tgttataagaacagaacag-cataggagtttccaaaactccattgttgcgtttttgattatccaaggtgcgattttgagtcatttgaagttattccaagc 4002892  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    |||||| ||||||||||| |||||||||||| |||  ||||||||||| |||||||||||    
T  4002893 caattt-aatcacaaaaacaagtaagtttttagaatcctattgcattgttgttttgtggt 4002951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 26 - 255
Target Start/End: Original strand, 44223114 - 44223343
Alignment:
Q  26 gaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcac 125  Q
    ||||||| || |||||||||||||||| |||||||| |||||| | | |||| |||| | |||||| |||||||||||||||||| ||||||||||||||    
T  44223114 gaatagatatgggagtttccaaaactctattgttacatttttgatct-cctacgtgcaattttgagtaatttcaagtcatttcaaaccaatttcaatcac 44223212  T
Q  126 aaaaataagtaagttttttgaactctattgcattgctgttttgtggttaaa-nnnnnnnnnnnnnnngttgaatttcgattatataggttttattgattt 224  Q
    ||||| ||||||||||||| ||   ||| |||||| ||||||||||| |||                ||| |||||  ||||||||||||||||||||||    
T  44223213 aaaaacaagtaagtttttttaatcttatcgcattgttgttttgtggtcaaattgtttaactttttttgttaaattttaattatataggttttattgattt 44223312  T
Q  225 tataatatgttaggataatttaggttagaat 255  Q
    ||| ||||||||||||| |||||||||||||    
T  44223313 tatgatatgttaggatagtttaggttagaat 44223343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 32 - 172
Target Start/End: Complemental strand, 36136572 - 36136433
Alignment:
Q  32 acataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaat 131  Q
    ||||||||||||||||||||| |||||| ||||| |  || ||| |||||||| ||||||  |||| |||||||| |||||||||||||||||||||||     
T  36136572 acataggagtttccaaaactctattgttgcgtttata-ttatccaaggtgcgattttgagtcatttgaagtcattccaagccaatttcaatcacaaaaac 36136474  T
Q  132 aagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    ||||||||||||||||  ||||||||||| || ||||||||    
T  36136473 aagtaagttttttgaatcctattgcattgttgctttgtggt 36136433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 33 - 172
Target Start/End: Original strand, 2645555 - 2645694
Alignment:
Q  33 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 132  Q
    ||||||||||||||||||||||||||| |||||||  || ||| |||||| | ||||||  |||| |||||||| ||||||||||| ||||||||||| |    
T  2645555 cataggagtttccaaaactccattgttgcgtttttaattatccaaggtgcaattttgagtcatttgaagtcattacaagccaattttaatcacaaaaaca 2645654  T
Q  133 agtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    |||||||||||||||  |||||| |||| || ||||||||    
T  2645655 agtaagttttttgaatcctattgtattgttgctttgtggt 2645694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 160
Target Start/End: Original strand, 19440336 - 19440483
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||||| |||| ||||||| |||||||||||||||||||||| |||||||  || |||| ||| ||| ||| | |||||| |||| ||||||||     
T  19440336 tgttataagaacagaacagacataagagtttccaaaactccattgttgcgttttttattctccttggtacgattttaaacaatttgaagtaatttcaagt 19440435  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattg 160  Q
    |||||||||||||||||| |||||| |||| ||||  |||||||||||    
T  19440436 caatttcaatcacaaaaacaagtaacttttgtgaatcctattgcattg 19440483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 20374296 - 20374445
Alignment:
Q  8 tgatctgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcattt 107  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||||||| |||||||  || || ||||||||| ||| |||          ||||     
T  20374296 tgatctgttataagaacagaacagacataggagtttccaaaactccattgttgcgtttttcattctcttaggtgcgattttcagc----------cattc 20374385  T
Q  108 caagccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgtttt 167  Q
    |||||||||||||| |||||||  ||||||||||||||||  ||||||||||| ||||||    
T  20374386 caagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcattgttgtttt 20374445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 33 - 147
Target Start/End: Original strand, 2950465 - 2950579
Alignment:
Q  33 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 132  Q
    ||||||||||||||||||||||||||| |||||||  |||| | |||||||| ||||||  |||| ||| ||||  |||||||||| ||||||||||| |    
T  2950465 cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcgattttgagtcatttgaagccattagaagccaattttaatcacaaaaaca 2950564  T
Q  133 agtaagttttttgaa 147  Q
    |||||||||||||||    
T  2950565 agtaagttttttgaa 2950579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 33 - 147
Target Start/End: Complemental strand, 46406565 - 46406451
Alignment:
Q  33 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 132  Q
    ||||||||||||||||||||||||||| |||||||  |||| | |||||||| ||||||  |||| ||| ||||  |||||||||| ||||||||||| |    
T  46406565 cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcgattttgagtcatttgaagccattagaagccaattttaatcacaaaaaca 46406466  T
Q  133 agtaagttttttgaa 147  Q
    |||||||||||||||    
T  46406465 agtaagttttttgaa 46406451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 11 - 170
Target Start/End: Original strand, 42321806 - 42321964
Alignment:
Q  11 tctgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaa 110  Q
    ||||||||| ||| |||| || ||||||||||||||||||||||||||||||||||| | || | ||||||||||||| |  ||    ||| ||||||||    
T  42321806 tctgttatatgaacagaacag-cataggagtttccaaaactccattgttacgttttttgcttccataggtgcgaatttcacaaagcataagccatttcaa 42321904  T
Q  111 gccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtg 170  Q
    |||||||| || || ||||  ||||||||||||||||  ||||||||||| | |||||||    
T  42321905 gccaatttaaagcaaaaaatcaagtaagttttttgaatcctattgcattgttattttgtg 42321964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 33 - 147
Target Start/End: Original strand, 49138713 - 49138827
Alignment:
Q  33 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 132  Q
    ||||||||||||||||||||||||||| |||||||  ||||   |||||||| ||||||  |||| ||| ||||  |||||||||| ||||||||||| |    
T  49138713 cataggagtttccaaaactccattgttgcgtttttaatttttgaaggtgcgattttgagtcatttgaagccattagaagccaattttaatcacaaaaaca 49138812  T
Q  133 agtaagttttttgaa 147  Q
    |||||||||||||||    
T  49138813 agtaagttttttgaa 49138827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 51017158 - 51017020
Alignment:
Q  32 acataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaat 131  Q
    |||||||||||||||||||||||||||||||||||| | || | ||||||||||||| |  ||    |||||||| ||| |||||||| | |||||||      
T  51017158 acataggagtttccaaaactccattgttacgttttttgcttccataggtgcgaatttcacaaagcataagtcattccaaaccaatttctagcacaaaatc 51017059  T
Q  132 aagtaagttttttgaactctattgcattgctgttttgtg 170  Q
    ||||||||||||||||  ||||||||||| | |||||||    
T  51017058 aagtaagttttttgaatcctattgcattgatattttgtg 51017020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 170
Target Start/End: Original strand, 50457574 - 50457735
Alignment:
Q  11 tctgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcg---aatttgagcaatttcaagtcattt 107  Q
    ||||||||| ||| |||| || ||||||||||||||||||||||||||||||||||||| ||||  |||||||     ||| |||||     |||||||     
T  50457574 tctgttatatgaacagaacag-cataggagtttccaaaactccattgttacgtttttggatttctcaggtgcgtttttttttagcaaacgtcagtcattc 50457672  T
Q  108 caagccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtg 170  Q
    |||||||||||||| |||||||  ||||||||||||||||  ||||||||| ||| |||||||    
T  50457673 caagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcatcgctattttgtg 50457735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 33 - 153
Target Start/End: Complemental strand, 54392002 - 54391882
Alignment:
Q  33 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 132  Q
    ||||||||||||||||||||||||||| |||||||  ||||   |||||||| ||||||  |||| ||| ||||  |||||||||| ||||||||||| |    
T  54392002 cataggagtttccaaaactccattgttgcgtttttaatttttgaaggtgcgattttgagtcatttgaagccattagaagccaattttaatcacaaaaaca 54391903  T
Q  133 agtaagttttttgaactctat 153  Q
    |||||| |||||||| |||||    
T  54391902 agtaagctttttgaattctat 54391882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 170
Target Start/End: Complemental strand, 18442121 - 18441959
Alignment:
Q  8 tgatctgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcattt 107  Q
    |||||||||||||||| | || | ||||||||||||| |||||| ||||||| |||||||| | ||||||||||||| ||| | ||   | ||||||||     
T  18442121 tgatctgttataagaacataacaaacataggagtttctaaaactgcattgttgcgtttttgatattcctaggtgcgattttcaccaggctaaagtcattc 18442022  T
Q  108 caagccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtg 170  Q
    ||||||||||  || |||| ||  |||||||| |||||||   |||||||||| |||||||||    
T  18442021 caagccaattctaagcacataatcaagtaagtgttttgaatcatattgcattgttgttttgtg 18441959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 170
Target Start/End: Complemental strand, 19487195 - 19487033
Alignment:
Q  8 tgatctgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcattt 107  Q
    |||||||||||||||| | || | ||||||||||||| |||||| ||||||| |||||||| | ||||||||||||| ||| | ||   | ||||||||     
T  19487195 tgatctgttataagaacataacaaacataggagtttctaaaactgcattgttgcgtttttgatattcctaggtgcgattttcaccaggctaaagtcattc 19487096  T
Q  108 caagccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtg 170  Q
    ||||||||||  || |||| ||  |||||||| |||||||   |||||||||| |||||||||    
T  19487095 caagccaattctaagcacataatcaagtaagtgttttgaatcatattgcattgttgttttgtg 19487033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 33 - 147
Target Start/End: Complemental strand, 34051287 - 34051173
Alignment:
Q  33 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 132  Q
    ||||||||||||||||||| ||||||| |||||||  ||||   |||||||| ||||||  |||| ||| ||||  |||||||||| ||||||||||| |    
T  34051287 cataggagtttccaaaacttcattgttgcgtttttaatttttgaaggtgcgattttgagtcatttgaagccattagaagccaattttaatcacaaaaaca 34051188  T
Q  133 agtaagttttttgaa 147  Q
    |||||||||||||||    
T  34051187 agtaagttttttgaa 34051173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 170
Target Start/End: Complemental strand, 44929336 - 44929199
Alignment:
Q  33 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 132  Q
    ||||||||||||||||||||||||||||| ||||| | || | ||||||||||||| |  ||    |||||||| |||| ||||||||| |||||||  |    
T  44929336 cataggagtttccaaaactccattgttacattttttgcttccataggtgcgaatttcacaaagcataagtcattccaagtcaatttcaagcacaaaatca 44929237  T
Q  133 agtaagttttttgaactctattgcattgctgttttgtg 170  Q
    |||||||||||||||  ||||||  ||||| |||||||    
T  44929236 agtaagttttttgaatcctattgtgttgctattttgtg 44929199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 77 - 172
Target Start/End: Original strand, 3493728 - 3493823
Alignment:
Q  77 aggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    |||||||| ||||||  |||| ||| ||||  |||||||||||||||||||||| ||||||||||||||||  ||||||||||| || ||||||||    
T  3493728 aggtgcgattttgagtcatttgaagccattagaagccaatttcaatcacaaaaacaagtaagttttttgaatcctattgcattgttgctttgtggt 3493823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 77 - 172
Target Start/End: Original strand, 3497422 - 3497517
Alignment:
Q  77 aggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    |||||||| ||||||  |||| ||| ||||  |||||||||||||||||||||| ||||||||||||||||  ||||||||||| || ||||||||    
T  3497422 aggtgcgattttgagtcatttgaagccattagaagccaatttcaatcacaaaaacaagtaagttttttgaatcctattgcattgttgctttgtggt 3497517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 172
Target Start/End: Complemental strand, 7247853 - 7247705
Alignment:
Q  14 gttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagcc 113  Q
    |||||||||| | || |||||||| ||||||||||||||||||||| || ||||  || || ||||||||          ||||   |||||| |||| |    
T  7247853 gttataagaacataacagacatagtagtttccaaaactccattgttgcggtttttattctcttaggtgcg----------attttctgtcattccaagtc 7247764  T
Q  114 aatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    ||||||||||| ||||||||||||||||||||||  ||||||||||| |||||||||||    
T  7247763 aatttcaatcaaaaaaataagtaagttttttgaatcctattgcattgttgttttgtggt 7247705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 54 - 168
Target Start/End: Complemental strand, 49275239 - 49275125
Alignment:
Q  54 attgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaataagtaagttttttgaactctat 153  Q
    |||||||||||||| | || | ||||||||||||| |  ||    ||||||||||||||||||||||| ||||||| |||||||||||||| ||  ||||    
T  49275239 attgttacgttttttgcttccataggtgcgaatttcacaaagcataagtcatttcaagccaatttcaagcacaaaattaagtaagtttttttaatcctat 49275140  T
Q  154 tgcattgctgttttg 168  Q
    ||||||||| |||||    
T  49275139 tgcattgctattttg 49275125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 199 - 256
Target Start/End: Complemental strand, 43478616 - 43478559
Alignment:
Q  199 ttcgattatataggttttattgattttataatatgttaggataatttaggttagaatt 256  Q
    ||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||    
T  43478616 ttcgattatatagattttattgattttatgatatgttaggatagtttaggttagaatt 43478559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 108 - 172
Target Start/End: Complemental strand, 2430176 - 2430112
Alignment:
Q  108 caagccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    ||||| ||||||||||||||||| ||||||||||||||||  ||||||||||| |||||||||||    
T  2430176 caagctaatttcaatcacaaaaacaagtaagttttttgaatcctattgcattgttgttttgtggt 2430112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 39 - 170
Target Start/End: Original strand, 27096093 - 27096224
Alignment:
Q  39 agtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaataagtaag 138  Q
    ||||||||||||||||||||| |||||||| | ||||||||||||| ||| | |||  | ||| |||| ||||||||||  ||  | ||||  |||||||    
T  27096093 agtttccaaaactccattgttgcgtttttgatattcctaggtgcgattttcaccaagcttaagccattccaagccaattctaaggaaaaaatcaagtaag 27096192  T
Q  139 ttttttgaactctattgcattgctgttttgtg 170  Q
    | |||||||  ||||||||||||||| |||||    
T  27096193 tgttttgaatcctattgcattgctgtgttgtg 27096224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 172
Target Start/End: Original strand, 46345017 - 46345165
Alignment:
Q  14 gttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagcc 113  Q
    |||||||||| |||| |||||||||||||||||||||| ||||||| || ||||  || || ||||||||| |||   |          |||| ||||||    
T  46345017 gttataagaacagaacagacataggagtttccaaaacttcattgttgcggttttcattctcttaggtgcgattttctac----------cattccaagcc 46345106  T
Q  114 aatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    ||||||||||||||||| ||||||||||||| ||   |||||||||| |||||||||||    
T  46345107 aatttcaatcacaaaaacaagtaagtttttttaatcttattgcattgttgttttgtggt 46345165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 84
Target Start/End: Complemental strand, 2432936 - 2432866
Alignment:
Q  14 gttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcga 84  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| || ||||  || || |||||||||    
T  2432936 gttataagaatagaacagacataggagtttccaaaactccattgttgcggttttcattctcttaggtgcga 2432866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 33 - 170
Target Start/End: Original strand, 11377345 - 11377482
Alignment:
Q  33 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 132  Q
    |||||||||||||||||||| |||||||||||||| | ||   ||||||||||||| |  ||    ||| |||| |||||||||||||| ||||||| ||    
T  11377345 cataggagtttccaaaactcaattgttacgttttttgcttcaataggtgcgaatttcacaaaccataagccattccaagccaatttcaagcacaaaatta 11377444  T
Q  133 agtaagttttttgaactctattgcattgctgttttgtg 170  Q
    | ||||||||| |||  | ||||| ||||| |||||||    
T  11377445 attaagtttttcgaatccaattgcgttgctattttgtg 11377482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 172
Target Start/End: Complemental strand, 41579717 - 41579568
Alignment:
Q  14 gttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagcc 113  Q
    |||||||||| ||||  ||||||||||||||||||||||||||| | || ||||  || || ||||||||| |||  ||          |||| ||||||    
T  41579717 gttataagaacagaactgacataggagtttccaaaactccattgctgcggttttcattctcttaggtgcgattttctgc----------cattccaagcc 41579628  T
Q  114 aatttcaatcacaaaaataagtaagtt-ttttgaactctattgcattgctgttttgtggt 172  Q
    ||||||||||||||||| ||||||||| |||||||  ||||||||||  |||||||||||    
T  41579627 aatttcaatcacaaaaacaagtaagtttttttgaatcctattgcattattgttttgtggt 41579568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 103 - 170
Target Start/End: Original strand, 34470483 - 34470550
Alignment:
Q  103 catttcaagccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtg 170  Q
    |||| |||||||||||||| |||||||  ||||||||||||||||  ||||||||||||| |||||||    
T  34470483 cattccaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcattgctattttgtg 34470550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 2430066 - 2430016
Alignment:
Q  205 tatataggttttattgattttataatatgttaggataatttaggttagaat 255  Q
    |||||||||||||||||||| || ||||||||||||| |||||||||||||    
T  2430066 tatataggttttattgatttcatgatatgttaggatagtttaggttagaat 2430016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 192 - 254
Target Start/End: Original strand, 49217353 - 49217415
Alignment:
Q  192 gttgaatttcgattatataggttttattgattttataatatgttaggataatttaggttagaa 254  Q
    ||| |||||||||||||||| ||||||||||||||| ||||||| ||||| |||| |||||||    
T  49217353 gttaaatttcgattatatagattttattgattttatgatatgttgggatagtttatgttagaa 49217415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 218 - 256
Target Start/End: Original strand, 24701019 - 24701057
Alignment:
Q  218 ttgattttataatatgttaggataatttaggttagaatt 256  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  24701019 ttgattttatgatatgttaggataatttaggttagaatt 24701057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 30194426 - 30194379
Alignment:
Q  11 tctgttataagaatagaatagacataggagtttccaaaactccattgtt 59  Q
    ||||||||| |||||||| | ||||||||||||||||||||||||||||    
T  30194426 tctgttatatgaatagaaca-acataggagtttccaaaactccattgtt 30194379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 170
Target Start/End: Original strand, 51011672 - 51011808
Alignment:
Q  34 ataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaataa 133  Q
    |||| |||||| |||||||||||||||||||||| | || | ||||||||||||| |  ||    ||||||||  ||| ||||||||| |||||||  ||    
T  51011672 atagaagtttcaaaaactccattgttacgttttttgcttccataggtgcgaatttcacaaaccataagtcattcgaagtcaatttcaagcacaaaatcaa 51011771  T
Q  134 gtaagttttttgaactctattgcattgctgttttgtg 170  Q
    |||| ||||||| |  ||| ||| ||||| |||||||    
T  51011772 gtaaattttttgtatcctactgcgttgctattttgtg 51011808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 256
Target Start/End: Original strand, 51694178 - 51694216
Alignment:
Q  218 ttgattttataatatgttaggataatttaggttagaatt 256  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  51694178 ttgattttatgatatgttaggatagtttaggttagaatt 51694216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 256
Target Start/End: Complemental strand, 54391803 - 54391765
Alignment:
Q  218 ttgattttataatatgttaggataatttaggttagaatt 256  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  54391803 ttgattttatgatatgttaggatagtttaggttagaatt 54391765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 255
Target Start/End: Original strand, 2645740 - 2645777
Alignment:
Q  218 ttgattttataatatgttaggataatttaggttagaat 255  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  2645740 ttgattttatgatatgttaggatagtttaggttagaat 2645777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 255
Target Start/End: Original strand, 3493884 - 3493921
Alignment:
Q  218 ttgattttataatatgttaggataatttaggttagaat 255  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  3493884 ttgattttatgatatgttaggatagtttaggttagaat 3493921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 255
Target Start/End: Original strand, 3497578 - 3497615
Alignment:
Q  218 ttgattttataatatgttaggataatttaggttagaat 255  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  3497578 ttgattttatgatatgttaggatagtttaggttagaat 3497615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 109 - 170
Target Start/End: Original strand, 10051779 - 10051840
Alignment:
Q  109 aagccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtg 170  Q
    ||||||||||||| |||||||  ||||||| ||||||||   |||||||||||| |||||||    
T  10051779 aagccaatttcaagcacaaaatcaagtaaggtttttgaatcatattgcattgctattttgtg 10051840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 255
Target Start/End: Complemental strand, 34051088 - 34051051
Alignment:
Q  218 ttgattttataatatgttaggataatttaggttagaat 255  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  34051088 ttgattttatgatatgttaggatagtttaggttagaat 34051051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 199 - 256
Target Start/End: Original strand, 34691909 - 34691965
Alignment:
Q  199 ttcgattatataggttttattgattttataatatgttaggataatttaggttagaatt 256  Q
    ||||||||||| | |||||| |||||||| ||||||||||||| |||| |||||||||    
T  34691909 ttcgattatattgattttat-gattttatgatatgttaggatagtttaagttagaatt 34691965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 255
Target Start/End: Complemental strand, 36136373 - 36136336
Alignment:
Q  218 ttgattttataatatgttaggataatttaggttagaat 255  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  36136373 ttgattttatgatatgttaggatagtttaggttagaat 36136336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 255
Target Start/End: Complemental strand, 46406366 - 46406329
Alignment:
Q  218 ttgattttataatatgttaggataatttaggttagaat 255  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  46406366 ttgattttatgatatgttaggatagtttaggttagaat 46406329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 255
Target Start/End: Original strand, 49138912 - 49138949
Alignment:
Q  218 ttgattttataatatgttaggataatttaggttagaat 255  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  49138912 ttgattttatgatatgttaggatagtttaggttagaat 49138949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 256
Target Start/End: Complemental strand, 49611722 - 49611685
Alignment:
Q  219 tgattttataatatgttaggataatttaggttagaatt 256  Q
    ||||||||| ||||||||||||| ||||||||||||||    
T  49611722 tgattttatgatatgttaggatagtttaggttagaatt 49611685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 255
Target Start/End: Complemental strand, 50998429 - 50998392
Alignment:
Q  218 ttgattttataatatgttaggataatttaggttagaat 255  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  50998429 ttgattttatgatatgttaggatagtttaggttagaat 50998392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 255
Target Start/End: Original strand, 52568063 - 52568100
Alignment:
Q  218 ttgattttataatatgttaggataatttaggttagaat 255  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  52568063 ttgattttatgatatgttaggatagtttaggttagaat 52568100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 227
Target Start/End: Complemental strand, 41805466 - 41805438
Alignment:
Q  199 ttcgattatataggttttattgattttat 227  Q
    |||||||||||||||||||||||||||||    
T  41805466 ttcgattatataggttttattgattttat 41805438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 227
Target Start/End: Original strand, 55205554 - 55205582
Alignment:
Q  199 ttcgattatataggttttattgattttat 227  Q
    |||||||||||||||||||||||||||||    
T  55205554 ttcgattatataggttttattgattttat 55205582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 227
Target Start/End: Original strand, 55267699 - 55267727
Alignment:
Q  199 ttcgattatataggttttattgattttat 227  Q
    |||||||||||||||||||||||||||||    
T  55267699 ttcgattatataggttttattgattttat 55267727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 100; Significance: 1e-49; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 13 - 172
Target Start/End: Original strand, 28112862 - 28113021
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||||| | || ||||||||||||||||||||||| |||||||| |||||  || |||||||||||| ||||||||||||||||||||| ||| |    
T  28112862 tgttataagaacataacagacataggagtttccaaaactctattgttacattttttattctcctaggtgcgattttgagcaatttcaagtcattccaaac 28112961  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    |||||||||||||||||| ||||||||||||||||  ||||||||||| |||||||||||    
T  28112962 caatttcaatcacaaaaacaagtaagttttttgaatcctattgcattgttgttttgtggt 28113021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 13 - 172
Target Start/End: Original strand, 36392204 - 36392364
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacg-tttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaag 111  Q
    ||||||||| | | || ||||||||||||||||||||||||||||||||| ||||| | | |||||||||||| ||||||||||||||||||||| ||||    
T  36392204 tgttataagtacataacagacataggagtttccaaaactccattgttacgattttttgatctcctaggtgcgattttgagcaatttcaagtcattccaag 36392303  T
Q  112 ccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    ||||||||||||||||||| |||||||||||| |||  ||||||||||| |||||||||||    
T  36392304 ccaatttcaatcacaaaaacaagtaagtttttagaatcctattgcattgttgttttgtggt 36392364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 8 - 172
Target Start/End: Complemental strand, 15309974 - 15309810
Alignment:
Q  8 tgatctgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcattt 107  Q
    |||||| |||||| |  |||| ||||||||||||||||||||||||||||||  |||||||||| |||||||||| | ||||||  |||||||||||||     
T  15309974 tgatctattataaaatcagaacagacataggagtttccaaaactccattgttttgtttttggttctcctaggtgcaattttgagtcatttcaagtcattc 15309875  T
Q  108 caagccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    ||||||||||||||||||||||| ||||||||||||| ||   |||||||||| |||||||||||    
T  15309874 caagccaatttcaatcacaaaaacaagtaagtttttttaatcttattgcattgttgttttgtggt 15309810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 41 - 173
Target Start/End: Original strand, 33603308 - 33603440
Alignment:
Q  41 tttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaataagtaagtt 140  Q
    ||||||||||||||||||||| ||||||||| |||||||||||| ||| ||| ||||||||||||| |||| |||||||||||||||||| |||||| ||    
T  33603308 tttccaaaactccattgttacctttttggttctcctaggtgcgattttcagccatttcaagtcattccaagtcaatttcaatcacaaaaacaagtaaatt 33603407  T
Q  141 ttttgaactctattgcattgctgttttgtggtt 173  Q
    ||| |||  ||||||||||||||||||||||||    
T  33603408 tttagaatcctattgcattgctgttttgtggtt 33603440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 13 - 165
Target Start/End: Complemental strand, 34142652 - 34142500
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||||||| || |||||||||||||||||||||||||||||| |||||||  || |||| | ||||| |||||||||||| ||| |||| |||||    
T  34142652 tgttataagaatataacagacataggagtttccaaaactccattgttgcgttttttattctccttgctgcgattttgagcaatttaaagccattccaagc 34142553  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgtt 165  Q
    |||||||||||||||||| ||||||||||| ||||  ||||||||||| ||||    
T  34142552 caatttcaatcacaaaaacaagtaagttttctgaatcctattgcattgttgtt 34142500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 13 - 173
Target Start/End: Original strand, 45361703 - 45361863
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||| ||||| | | ||| |||||||| ||||||| |||||||| ||||  || |    
T  45361703 tgttataagaacagaacagacataggagtttccaaaactccattgttacattttttgatctccaaggtgcgattttgagctatttcaagccattctaaac 45361802  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggtt 173  Q
    |||||||||||| ||||| ||||||||||||| || |||||||||||| ||||||| ||||    
T  45361803 caatttcaatcataaaaacaagtaagtttttttaattctattgcattgttgttttgcggtt 45361863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 33 - 172
Target Start/End: Complemental strand, 45258004 - 45257865
Alignment:
Q  33 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 132  Q
    ||||||||||||||||||| ||||||| |||||||| || ||| |||||||| ||||||  |||| |||||||||||||||||||||||||||||||| |    
T  45258004 cataggagtttccaaaacttcattgttgcgtttttgattatccaaggtgcgattttgagtcatttgaagtcatttcaagccaatttcaatcacaaaaaca 45257905  T
Q  133 agtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    |||||||||||||||  ||||||||||| || ||||||||    
T  45257904 agtaagttttttgaatcctattgcattgttgctttgtggt 45257865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 13 - 172
Target Start/End: Complemental strand, 48194625 - 48194466
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||||| | || ||||||||||||||||||||||| |||||| |||||||| ||||||| | ||||| |||||||||||| |||  ||| |||||    
T  48194625 tgttataagaacataacagacataggagtttccaaaactctattgttgcgtttttgattttccttgctgcgattttgagcaatttgaagctattccaagc 48194526  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
     ||||||||||||||||| ||||||||||| ||||  ||||||||||| |||||||||||    
T  48194525 gaatttcaatcacaaaaacaagtaagttttctgaatcctattgcattgttgttttgtggt 48194466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 13 - 165
Target Start/End: Complemental strand, 40590543 - 40590391
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||||| |||| |||||||||||||||||||| ||||||| ||||||||| | | ||| |||||||| ||||||| |||||||| |||| |||||    
T  40590543 tgttataagaacagaacagacataggagtttccaaaattccattgctacgttttttgatctccaaggtgcgattttgagctatttcaagccattccaagc 40590444  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgtt 165  Q
    ||||||||||| |||||| ||||||||||||| ||  ||||||||||| ||||    
T  40590443 caatttcaatcgcaaaaacaagtaagtttttttaatcctattgcattgttgtt 40590391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 25 - 173
Target Start/End: Original strand, 28977649 - 28977797
Alignment:
Q  25 agaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatca 124  Q
    |||| ||||||||||||||||||||||| ||||||||| |||| | | | | |||||||| ||||||| ||||||||||||| ||| |||||||||||||    
T  28977649 agaacagacataggagtttccaaaactctattgttacgatttttgatcttcaaggtgcgattttgagctatttcaagtcattccaatccaatttcaatca 28977748  T
Q  125 caaaaataagtaagttttttgaactctattgcattgctgttttgtggtt 173  Q
    || ||| ||||||||||||| ||  ||||||||||| ||||||||||||    
T  28977749 cataaacaagtaagtttttttaatcctattgcattgttgttttgtggtt 28977797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 13 - 172
Target Start/End: Complemental strand, 10524324 - 10524166
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||||| |||| | ||||||||||||||||||||| | |||| |||||||  || ||| |||||||| ||||||  |||| |||||||| |||||    
T  10524324 tgttataagaacagaaca-acataggagtttccaaaactctaatgttgcgttttttattatccaaggtgcgattttgagtcatttgaagtcattccaagc 10524226  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    |||||||||||||||||| ||||||||||||||||  ||||||||||| || ||||||||    
T  10524225 caatttcaatcacaaaaacaagtaagttttttgaatcctattgcattgttgctttgtggt 10524166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 13 - 172
Target Start/End: Original strand, 46596965 - 46597122
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||||| |||| |||||||| ||||||||||||||||||||| |||||||  || |||| |||| || |||||||||||| ||| || |||||||    
T  46596965 tgttataagaacagaacagacatagaagtttccaaaactccattgttgcgttttttattctccttggtgagattttgagcaatttgaagcca-ttcaagc 46597063  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    |||||||||||||||||| || |||||||||| ||  ||||||||||| |||||||||||    
T  46597064 caatttcaatcacaaaaacaactaagtttttt-aatcctattgcattgttgttttgtggt 46597122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 33 - 172
Target Start/End: Complemental strand, 20566307 - 20566168
Alignment:
Q  33 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 132  Q
    ||||||||||||||||||||||||||| |||||||  |||| | |||||||| ||||||  |||| ||| ||||  |||||||||| ||||||||||| |    
T  20566307 cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcgattttgagtcatttgaagccattagaagccaattttaatcacaaaaaca 20566208  T
Q  133 agtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    |||||||||||||||  ||||||||||| || ||||||||    
T  20566207 agtaagttttttgaatcctattgcattgttgctttgtggt 20566168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 32 - 160
Target Start/End: Original strand, 15070453 - 15070581
Alignment:
Q  32 acataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaat 131  Q
    |||||||||||||||||||||||||||| ||||||||  | ||| || ||||| ||||||  |||| ||| |||| |||||||||||||||||||||||     
T  15070453 acataggagtttccaaaactccattgttgcgtttttgagtatccaagttgcgattttgagtcatttgaagacattacaagccaatttcaatcacaaaaac 15070552  T
Q  132 aagtaagttttttgaactctattgcattg 160  Q
    ||||||||||||| ||  |||||||||||    
T  15070553 aagtaagtttttttaatcctattgcattg 15070581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 41623868 - 41623723
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||| | |||| ||||||||||||||| ||||||||||||| |||||||| | | |||||| ||||| |||||||||||||||||              
T  41623868 tgttataagtacagaacagacataggagtttcgaaaactccattgtcacgttttttgatctcctagatgcgattttgagcaatttcaagt---------- 41623779  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttg 168  Q
    |||||||||||||||||| ||||||||||||||||  ||||||||||| |||||||    
T  41623778 caatttcaatcacaaaaacaagtaagttttttgaatcctattgcattgttgttttg 41623723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 13 - 172
Target Start/End: Complemental strand, 17840883 - 17840725
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||||| |||| || ||||||||| ||||||||| ||||||| |||||||| || ||| |||||||| |||  |  |||| |||||||| ||| |    
T  17840883 tgttataagaacagaacag-cataggagtctccaaaacttcattgttgcgtttttgattatccaaggtgcgattttaggtcatttgaagtcattccaatc 17840785  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    |||||||||||||||||| ||||||||||||||||  ||||||||||  || ||||||||    
T  17840784 caatttcaatcacaaaaacaagtaagttttttgaatcctattgcattcttgctttgtggt 17840725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 172
Target Start/End: Original strand, 46860590 - 46860739
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||| || |||| | | |||||||||||| ||| | |||||  |||          |    
T  46860590 tgttataagaacagaacagacataggagtttccaaaactccattgttgcggtttttgatctcctaggtgcgatttttaacaattctaag----------c 46860679  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    |||||||||||||||||| ||||||||||||||||  ||||||||||| |||||||||||    
T  46860680 caatttcaatcacaaaaacaagtaagttttttgaatcctattgcattgttgttttgtggt 46860739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 33 - 135
Target Start/End: Complemental strand, 34139702 - 34139600
Alignment:
Q  33 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 132  Q
    ||||||||||||||||||||||||||| |||||||  || ||| |||||||| ||||||  |||| |||||||| ||||||||||||||||||||||| |    
T  34139702 cataggagtttccaaaactccattgttgcgttttttattatccaaggtgcgattttgagtcatttgaagtcattccaagccaatttcaatcacaaaaaca 34139603  T
Q  133 agt 135  Q
    |||    
T  34139602 agt 34139600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 42503915 - 42504053
Alignment:
Q  32 acataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaat 131  Q
    |||||||||||||||||||||||||||| ||||||||  | ||| || ||||| ||||||  |||| ||| ||||  ||| ||||||||||||||||||     
T  42503915 acataggagtttccaaaactccattgttgcgtttttgagtatccaagttgcgattttgagtcatttgaagacattagaagtcaatttcaatcacaaaaac 42504014  T
Q  132 aagtaagttttttgaactctattgcattgctgttttgtg 170  Q
    ||||||||||||| ||  ||||||||||| || ||||||    
T  42504015 aagtaagtttttttaatcctattgcattgttgctttgtg 42504053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 10225837 - 10225750
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaa 100  Q
    ||||||||||||||||   |||||||||||||||||||||||||||| |||||||| || |||||||||| | |||||||||||||||    
T  10225837 tgttataagaatagaaccaacataggagtttccaaaactccattgttgcgtttttgattctcctaggtgcaattttgagcaatttcaa 10225750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 33 - 147
Target Start/End: Original strand, 9365778 - 9365892
Alignment:
Q  33 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 132  Q
    ||||||||||||||||||||||||||| |||||||  ||||   |||||||| ||||||  |||| ||| ||||  |||||||||| ||||||||||| |    
T  9365778 cataggagtttccaaaactccattgttgcgtttttaatttttgaaggtgcgattttgagtcatttgaagccattagaagccaattttaatcacaaaaaca 9365877  T
Q  133 agtaagttttttgaa 147  Q
    |||||||||||||||    
T  9365878 agtaagttttttgaa 9365892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 22292711 - 22292573
Alignment:
Q  32 acataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaat 131  Q
    |||||||||||||||||| ||||||||||||||||| | || | ||||||||||||| |  ||    ||| |||| |||||||||||||| |||||||      
T  22292711 acataggagtttccaaaaatccattgttacgttttttgcttccataggtgcgaatttcacaaaccataagccattccaagccaatttcaagcacaaaatc 22292612  T
Q  132 aagtaagttttttgaactctattgcattgctgttttgtg 170  Q
    ||||||||||||||||  ||||||| ||||| |||||||    
T  22292611 aagtaagttttttgaatcctattgcgttgctattttgtg 22292573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 170
Target Start/End: Complemental strand, 4231253 - 4231093
Alignment:
Q  10 atctgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttca 109  Q
    |||||||||||||| |||| |||||||||| ||||||||| | |||| || |||||||||  ||| ||||||||| ||| | |||    |||||||| ||    
T  4231253 atctgttataagaacagaacagacataggaatttccaaaatttcattattgcgtttttggaattcttaggtgcgattttcaccaagcataagtcattcca 4231154  T
Q  110 agccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtg 170  Q
    |||||||||||| |||||||  ||||||||| ||   |  |||||||||||||||||||||    
T  4231153 agccaatttcaagcacaaaatcaagtaagttgttatcatcctattgcattgctgttttgtg 4231093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 196 - 251
Target Start/End: Complemental strand, 10225673 - 10225618
Alignment:
Q  196 aatttcgattatataggttttattgattttataatatgttaggataatttaggtta 251  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  10225673 aatttcgattatataggttttattgattttatgatatgttaggataatttaggtta 10225618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 196 - 255
Target Start/End: Complemental strand, 41623689 - 41623630
Alignment:
Q  196 aatttcgattatataggttttattgattttataatatgttaggataatttaggttagaat 255  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  41623689 aatttcgattatataggttttattgattttatgatatgttaggatagtttaggttagaat 41623630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 34 - 160
Target Start/End: Original strand, 20876415 - 20876541
Alignment:
Q  34 ataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaataa 133  Q
    |||||||||||||||||||||||||||||||||| | || | ||||||||||||| |  ||    ||| |||| |||||||||| ||| |||||||  ||    
T  20876415 ataggagtttccaaaactccattgttacgttttttgcttccataggtgcgaatttcacaaagcataagccattccaagccaattccaagcacaaaatcaa 20876514  T
Q  134 gtaagttttttgaactctattgcattg 160  Q
    ||||||||||||||  |||||||||||    
T  20876515 gtaagttttttgaatcctattgcattg 20876541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 32 - 162
Target Start/End: Original strand, 43349738 - 43349868
Alignment:
Q  32 acataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaat 131  Q
    |||||||||||||||||||||||||||||||||||| | || | ||||||||||||| |  ||    ||| ||||  ||||||||||||| |||||||      
T  43349738 acataggagtttccaaaactccattgttacgttttttggttccataggtgcgaatttcacaaaccataagccattcgaagccaatttcaagcacaaaatc 43349837  T
Q  132 aagtaagttttttgaactctattgcattgct 162  Q
    ||||||||||||||||  ||||||| |||||    
T  43349838 aagtaagttttttgaatcctattgcgttgct 43349868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 196 - 255
Target Start/End: Complemental strand, 42684013 - 42683954
Alignment:
Q  196 aatttcgattatataggttttattgattttataatatgttaggataatttaggttagaat 255  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  42684013 aattttgattatataggttttattgattttatgatatgttaggatagtttaggttagaat 42683954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 33 - 143
Target Start/End: Complemental strand, 17185043 - 17184933
Alignment:
Q  33 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 132  Q
    ||||||||||||||||||||||||||||| ||||| | || | ||||||||||||| |  || |  ||| |||| ||||||||||||||||||||||  |    
T  17185043 cataggagtttccaaaactccattgttacattttttgcttccataggtgcgaatttcacaaactataagccattccaagccaatttcaatcacaaaatca 17184944  T
Q  133 agtaagttttt 143  Q
    | |||||||||    
T  17184943 attaagttttt 17184933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 103 - 255
Target Start/End: Original strand, 21185794 - 21185948
Alignment:
Q  103 catttcaagccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggttaaa--nnnnnnnnnnnnnnngttgaattt 200  Q
    |||||||||||||||||||||||||||| || |||||||||||||  ||||||||||| | |||||||||  ||                 ||| |||||    
T  21185794 catttcaagccaatttcaatcacaaaaacaaataagttttttgaatcctattgcattgttattttgtggtcgaattgtttgttttttttttgttaaattt 21185893  T
Q  201 cgattatataggttttattgattttataatatgttaggataatttaggttagaat 255  Q
    ||||||||||  ||||||||||||||| ||||||||||||| |||||||||||||    
T  21185894 cgattatataaattttattgattttatgatatgttaggatagtttaggttagaat 21185948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 103 - 172
Target Start/End: Complemental strand, 48272359 - 48272290
Alignment:
Q  103 catttcaagccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||  ||||| ||||| |||||||||||    
T  48272359 cattccaagccaatttcaatcacaaaaacaagtaagttttttgaatcctattacattgttgttttgtggt 48272290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 103 - 171
Target Start/End: Complemental strand, 42684111 - 42684043
Alignment:
Q  103 catttcaagccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtgg 171  Q
    |||| ||| ||||||||||||||||||||||||||||||||| ||  ||||||||||| ||||||||||    
T  42684111 cattccaaaccaatttcaatcacaaaaataagtaagtttttttaatcctattgcattgttgttttgtgg 42684043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 172
Target Start/End: Original strand, 48314753 - 48314901
Alignment:
Q  14 gttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagcc 113  Q
    |||||||||| | || |||||||||||||||||||| ||||||||| || ||||  || || ||||||||| |||  ||          |||| |||||     
T  48314753 gttataagaacataacagacataggagtttccaaaattccattgttgcggttttcattctcttaggtgcgattttctgc----------cattccaagca 48314842  T
Q  114 aatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    ||||||||||||||||| ||||||||||||||||   |||||||||| |||||||||||    
T  48314843 aatttcaatcacaaaaacaagtaagttttttgaatcatattgcattgttgttttgtggt 48314901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 170
Target Start/End: Original strand, 1640961 - 1641112
Alignment:
Q  7 ttgatctgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatt 106  Q
    ||||||||||||||||| || |  ||| ||| ||||||||||||||||||||| |||||||||  ||| ||||||||| ||| |||          ||||    
T  1640961 ttgatctgttataagaacagca--gacttagaagtttccaaaactccattgttgcgtttttggaattcttaggtgcgattttcagc----------catt 1641048  T
Q  107 tcaagccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtg 170  Q
     ||||||||||||||||||||||  |||||||| |||||||   |||||||||| | |||||||    
T  1641049 ccaagccaatttcaatcacaaaatcaagtaagtgttttgaatcatattgcattggttttttgtg 1641112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 196 - 256
Target Start/End: Complemental strand, 34142464 - 34142399
Alignment:
Q  196 aatttcgattatataggttt-----tattgattttataatatgttaggataatttaggttagaatt 256  Q
    |||||||||||||||||||      |||||||||||| ||||||||||||||||||||||||||||    
T  34142464 aatttcgattatataggttcgattatattgattttatgatatgttaggataatttaggttagaatt 34142399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 113 - 173
Target Start/End: Complemental strand, 10225758 - 10225698
Alignment:
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggtt 173  Q
    |||||||||||||||||||||||||||||||| ||  ||| || |||| ||||||||||||    
T  10225758 caatttcaatcacaaaaataagtaagtttttttaatcctactgaattgttgttttgtggtt 10225698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 144
Target Start/End: Complemental strand, 42736864 - 42736731
Alignment:
Q  11 tctgttataagaatagaatagacataggagtttccaaaactccattgttacgt-ttttggttttcctaggtgcgaatttgagcaatttcaagtcatttca 109  Q
    ||||||||| ||| |||| || ||| ||||||||||||||||||||||||||| |||| | ||||  |||||||  ||| |||||     || |||| ||    
T  42736864 tctgttatatgaacagaacag-catcggagtttccaaaactccattgttacgtttttttgatttctcaggtgcgtttttcagcaaacatcagccattcca 42736766  T
Q  110 agccaatttcaatcacaaaaataagtaagtttttt 144  Q
    |||||||||||| |||||||  |||||||||||||    
T  42736765 agccaatttcaagcacaaaatcaagtaagtttttt 42736731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 40590326 - 40590285
Alignment:
Q  214 tttattgattttataatatgttaggataatttaggttagaat 255  Q
    ||||||||| |||| |||||||||||||||||||||||||||    
T  40590326 tttattgatgttatgatatgttaggataatttaggttagaat 40590285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 255
Target Start/End: Original strand, 45361925 - 45361962
Alignment:
Q  218 ttgattttataatatgttaggataatttaggttagaat 255  Q
    |||||||||| |||||||||||||||||||||||||||    
T  45361925 ttgattttatgatatgttaggataatttaggttagaat 45361962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 53
Target Start/End: Complemental strand, 48272419 - 48272380
Alignment:
Q  14 gttataagaatagaatagacataggagtttccaaaactcc 53  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  48272419 gttataagaacagaatagacatagtagtttccaaaactcc 48272380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 67
Target Start/End: Complemental strand, 42684191 - 42684137
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgttttt 67  Q
    ||||||||||| | || ||||||| |||||||||||||||||||||| || ||||    
T  42684191 tgttataagaacataacagacatatgagtttccaaaactccattgttgcggtttt 42684137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 255
Target Start/End: Original strand, 9365977 - 9366014
Alignment:
Q  218 ttgattttataatatgttaggataatttaggttagaat 255  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  9365977 ttgattttatgatatgttaggatagtttaggttagaat 9366014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 255
Target Start/End: Complemental strand, 10524102 - 10524065
Alignment:
Q  218 ttgattttataatatgttaggataatttaggttagaat 255  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  10524102 ttgattttatgatatgttaggatattttaggttagaat 10524065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 255
Target Start/End: Complemental strand, 17840665 - 17840628
Alignment:
Q  218 ttgattttataatatgttaggataatttaggttagaat 255  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  17840665 ttgattttatgatatgttaggatagtttaggttagaat 17840628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 196 - 256
Target Start/End: Complemental strand, 48194436 - 48194371
Alignment:
Q  196 aatttcgattatataggttt-----tattgattttataatatgttaggataatttaggttagaatt 256  Q
    |||||||||||||||||||      |||||||||||| ||||||||||||  ||||||||||||||    
T  48194436 aatttcgattatataggttcgattatattgattttatgatatgttaggattgtttaggttagaatt 48194371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 96; Significance: 4e-47; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 13 - 172
Target Start/End: Original strand, 35019656 - 35019815
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    |||||||| || | || |||||| ||||||||||||||||||||||| |||||||| || |||| ||||||| |||||||||||| |||||||| |||||    
T  35019656 tgttataataacataacagacatcggagtttccaaaactccattgttgcgtttttgattctccttggtgcgattttgagcaatttgaagtcattccaagc 35019755  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    |||||||||||||||||| ||||||||||||||||  ||||||||||| |||||||||||    
T  35019756 caatttcaatcacaaaaacaagtaagttttttgaatcctattgcattgttgttttgtggt 35019815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 13 - 173
Target Start/End: Complemental strand, 29076317 - 29076157
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||||| | || |||||||||||||||||||||||||||||||||||||| | | ||| | |||||| ||||||| ||||||||||||| ||| |    
T  29076317 tgttataagaacaaaacagacataggagtttccaaaactccattgttacgttttttgatctccgaagtgcgattttgagctatttcaagtcattccaaac 29076218  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggtt 173  Q
    |||||||||||||||||| ||||||||||||| || |||||||||||| ||||||| ||||    
T  29076217 caatttcaatcacaaaaacaagtaagtttttttaattctattgcattgttgttttgcggtt 29076157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 13 - 173
Target Start/End: Complemental strand, 29109850 - 29109690
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||||| | || |||||||||||||||||||||||||||||||||||||| | | ||| | |||||| ||||||| ||||||||||||| ||| |    
T  29109850 tgttataagaacaaaacagacataggagtttccaaaactccattgttacgttttttgatctccgaagtgcgattttgagctatttcaagtcattccaaac 29109751  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggtt 173  Q
    |||||||||||||||||| ||||||||||||| || |||||||||||| ||||||| ||||    
T  29109750 caatttcaatcacaaaaacaagtaagtttttttaattctattgcattgttgttttgcggtt 29109690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 13 - 173
Target Start/End: Complemental strand, 29111290 - 29111130
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||||| | || |||||||||||||||||||||||||||||||||||||| | | ||| | |||||| ||||||| ||||||||||||| ||| |    
T  29111290 tgttataagaacaaaacagacataggagtttccaaaactccattgttacgttttttgatctccgaagtgcgattttgagctatttcaagtcattccaaac 29111191  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggtt 173  Q
    |||||||||||||||||| ||||||||||||| || |||||||||||| ||||||| ||||    
T  29111190 caatttcaatcacaaaaacaagtaagtttttttaattctattgcattgttgttttgcggtt 29111130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 13 - 172
Target Start/End: Original strand, 34801583 - 34801743
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||| |||||| |||||||||||||| |||||||||||||||||||||||  || |||||||||||| |||||||||||| ||| |||| |||||    
T  34801583 tgttataagtatagaaaagacataggagttttcaaaactccattgttacgttttttattctcctaggtgcgattttgagcaatttgaagccattccaagc 34801682  T
Q  113 caatttcaatcaca-aaaataagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    |||||||||||||| |||| ||||||||||||||||  ||||||||||  |||||||||||    
T  34801683 caatttcaatcacacaaaaaaagtaagttttttgaatcctattgcattcttgttttgtggt 34801743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 13 - 256
Target Start/End: Complemental strand, 29068259 - 29068012
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||||| | || | ||||||||||||| |||||||||||||||||||||| | | ||| |||||||| |||||||  ||||||| ||||||||||    
T  29068259 tgttataagaacaaaacaaacataggagtttctaaaactccattgttacgttttttgatctccaaggtgcgattttgagctctttcaagccatttcaagc 29068160  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggttaaa----nnnnnnnnnnnnnnngttgaatttcgattata 208  Q
    |||||||||||||||||| ||||||||||||| || |||||||||||| ||||||| |||| ||                   ||| |||||||||||||    
T  29068159 caatttcaatcacaaaaacaagtaagtttttttaattctattgcattgttgttttgcggttgaatttttttttttttttttttgttaaatttcgattata 29068060  T
Q  209 taggttttattgattttataatatgttaggataatttaggttagaatt 256  Q
    ||| ||||||| ||||||| ||||||||||||| ||||||||||||||    
T  29068059 tagattttattaattttatgatatgttaggatagtttaggttagaatt 29068012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 13 - 173
Target Start/End: Complemental strand, 29083506 - 29083346
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||||| | || | ||||||||||||| |||||||||||||||||||||| | | ||| |||||||| |||||||  ||||||| ||||||||||    
T  29083506 tgttataagaacaaaacaaacataggagtttctaaaactccattgttacgttttttgatctccaaggtgcgattttgagctctttcaagccatttcaagc 29083407  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggtt 173  Q
    |||||||||||||||||| ||||||||||||| || |||||||||||| ||||||| ||||    
T  29083406 caatttcaatcacaaaaacaagtaagtttttttaattctattgcattgttgttttgcggtt 29083346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 13616320 - 13616475
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||| |||||||  || |||| ||||||| || || |||||| ||| |||| |||||    
T  13616320 tgttataagaacagaacagacataggagtttccaaaactccattgttgcgttttttattatccttggtgcgatttcgaacaatttgaagccattccaagc 13616419  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttg 168  Q
    |||||||||||||||||| ||||||||||||| ||  ||||||||||| |||||||    
T  13616420 caatttcaatcacaaaaacaagtaagttttttaaatcctattgcattgttgttttg 13616475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 59 - 255
Target Start/End: Original strand, 32026087 - 32026284
Alignment:
Q  59 tacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaataagtaagttttttgaactctattgcat 158  Q
    |||||||||| || |||||||||||| ||||||||||||||||  ||| ||||||||||||||||||||||| ||||||||||||||||  |||||| ||    
T  32026087 tacgtttttgattctcctaggtgcgattttgagcaatttcaagctattccaagccaatttcaatcacaaaaacaagtaagttttttgaatcctattgaat 32026186  T
Q  159 tgctgttttgtggt-taaannnnnnnnnnnnnnngttgaatttcgattatataggttttattgattttataatatgttaggataatttaggttagaat 255  Q
    || |||||||||||  ||                ||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  32026187 tgttgttttgtggtcgaattgtttgtatttttttgttaaatttcgattatataggttttattgattttatgatatgttaggatagtttaggttagaat 32026284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 33 - 172
Target Start/End: Original strand, 32691284 - 32691423
Alignment:
Q  33 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 132  Q
    ||||||||||||||||||||||||||| |||||||  || ||| |||||||| ||||||  |||| |||||||| ||||||||||| ||||||||||| |    
T  32691284 cataggagtttccaaaactccattgttgcgtttttaattatccaaggtgcgattttgagtcattttaagtcattacaagccaattttaatcacaaaaaca 32691383  T
Q  133 agtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    |||||||||||||||  |||||| |||| || ||||||||    
T  32691384 agtaagttttttgaatcctattgtattgttgctttgtggt 32691423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 14 - 172
Target Start/End: Complemental strand, 13404625 - 13404467
Alignment:
Q  14 gttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagcc 113  Q
    ||||||||||||||| | ||||| |||||||||||||||||||||| || ||||  || || ||||||| | |||  || ||| ||||||||| ||| ||    
T  13404625 gttataagaatagaacatacataagagtttccaaaactccattgttgcggttttcattctcttaggtgcaattttctgccattccaagtcattccaatcc 13404526  T
Q  114 aatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    ||||| ||||||||||| ||||||||||||||||  ||||||||||| |||||||||||    
T  13404525 aatttaaatcacaaaaacaagtaagttttttgaatcctattgcattgttgttttgtggt 13404467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 15 - 169
Target Start/End: Complemental strand, 14124710 - 14124556
Alignment:
Q  15 ttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagcca 114  Q
    ||||||||| ||||  |||||||||||||||||||||| ||||||||||||||  || ||| |||||||| ||| ||| |||||||| |||| |||||||    
T  14124710 ttataagaacagaactgacataggagtttccaaaactctattgttacgttttttattctccaaggtgcgattttcagccatttcaagccattccaagcca 14124611  T
Q  115 atttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgt 169  Q
    |||||||||||||||| ||||| || || ||||   |||||||||| ||||||||    
T  14124610 atttcaatcacaaaaacaagtacgtgttctgaatcttattgcattgttgttttgt 14124556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 33 - 172
Target Start/End: Complemental strand, 27641692 - 27641553
Alignment:
Q  33 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 132  Q
    ||||||||||||| ||||||||||||| |||||||  ||||   |||||||| ||||||  |||| ||| ||||  |||||||||| ||||||||||| |    
T  27641692 cataggagtttccgaaactccattgttgcgtttttaatttttgaaggtgcgattttgagtcatttgaagccattagaagccaattttaatcacaaaaaca 27641593  T
Q  133 agtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    |||||||||||||||  ||||||||||| || ||||||||    
T  27641592 agtaagttttttgaatcctattgcattgttgctttgtggt 27641553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 33 - 147
Target Start/End: Complemental strand, 11694001 - 11693887
Alignment:
Q  33 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 132  Q
    ||||||||||||||||||||||||||| |||||||  ||||   |||||||| ||||||  |||| ||| ||||  |||||||||| ||||||||||| |    
T  11694001 cataggagtttccaaaactccattgttgcgtttttaatttttgaaggtgcgattttgagtcatttgaagccattagaagccaattttaatcacaaaaaca 11693902  T
Q  133 agtaagttttttgaa 147  Q
    |||||||||||||||    
T  11693901 agtaagttttttgaa 11693887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 196 - 256
Target Start/End: Original strand, 34801777 - 34801837
Alignment:
Q  196 aatttcgattatataggttttattgattttataatatgttaggataatttaggttagaatt 256  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  34801777 aatttcgattatataggttttattgattttatgatatgttaggatactttaggttagaatt 34801837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 117
Target Start/End: Complemental strand, 17126973 - 17126862
Alignment:
Q  7 ttgatctgtt-ataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcat 105  Q
    |||||||||| ||||||| |||| |||||||||||||||||||||||||| ||| ||||||||| |||  ||||||||| ||| | |||    |||||||    
T  17126973 ttgatctgtttataagaacagaacagacataggagtttccaaaactccatcgttgcgtttttggatttattaggtgcgattttcaccaagcataagtcat 17126874  T
Q  106 ttcaagccaatt 117  Q
    ||||||||||||    
T  17126873 ttcaagccaatt 17126862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 33 - 147
Target Start/End: Complemental strand, 6207034 - 6206920
Alignment:
Q  33 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 132  Q
    ||||||||||||||||||| ||||| | |||||||  ||||   |||||||| ||||||  |||| ||| ||||  |||||||||| ||||||||||| |    
T  6207034 cataggagtttccaaaacttcattgatgcgtttttaattttttaaggtgcgattttgagtcatttgaagccattagaagccaattttaatcacaaaaaca 6206935  T
Q  133 agtaagttttttgaa 147  Q
    |||||||||||||||    
T  6206934 agtaagttttttgaa 6206920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 196 - 256
Target Start/End: Complemental strand, 29083318 - 29083258
Alignment:
Q  196 aatttcgattatataggttttattgattttataatatgttaggataatttaggttagaatt 256  Q
    |||||||||||||||| ||||||| ||||||| ||||||||||||| ||||||||||||||    
T  29083318 aatttcgattatatagattttattaattttatgatatgttaggatagtttaggttagaatt 29083258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 196 - 256
Target Start/End: Complemental strand, 29109661 - 29109601
Alignment:
Q  196 aatttcgattatataggttttattgattttataatatgttaggataatttaggttagaatt 256  Q
    |||||||||||||||| ||||||| ||||||| ||||||||||||| ||||||||||||||    
T  29109661 aatttcgattatatagattttattaattttatgatatgttaggatagtttaggttagaatt 29109601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 170
Target Start/End: Complemental strand, 12398658 - 12398521
Alignment:
Q  33 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 132  Q
    ||||||||||| ||||||||||||||||||||| | | || | |||||||||| || |  ||    ||| ||||  ||||||||||||| |||||||  |    
T  12398658 cataggagttttcaaaactccattgttacgtttattgcttccataggtgcgaaatttacaaaccataagccattcaaagccaatttcaagcacaaaatca 12398559  T
Q  133 agtaagttttttgaactctattgcattgctgttttgtg 170  Q
    |||||||||||||||  ||||||  ||||| |||||||    
T  12398558 agtaagttttttgaatcctattgtgttgctattttgtg 12398521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 237
Target Start/End: Complemental strand, 14124527 - 14124486
Alignment:
Q  196 aatttcgattatataggttttattgattttataatatgttag 237  Q
    |||||||||||||||||||||||||||||||| || ||||||    
T  14124527 aatttcgattatataggttttattgattttatgatttgttag 14124486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 255
Target Start/End: Original strand, 13616506 - 13616564
Alignment:
Q  196 aatttcgattatataggttttattgattttataatatgttaggataatttaggttagaat 255  Q
    |||||||||||||| | |||  |||||||||| ||||||||||||| |||||||||||||    
T  13616506 aatttcgattatattgatttg-ttgattttatgatatgttaggatagtttaggttagaat 13616564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 29 - 160
Target Start/End: Original strand, 30763412 - 30763543
Alignment:
Q  29 tagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaa 128  Q
    ||||||||||| ||| | || |||||||||| || ||||||  ||| || |||| | ||| | |||  | |||||||| |||||||||| ||| ||||||    
T  30763412 tagacataggaattttcgaatctccattgttgcggttttgggattcttatgtgcaattttcaccaagcttaagtcattccaagccaattacaagcacaaa 30763511  T
Q  129 aataagtaagttttttgaactctattgcattg 160  Q
    |  |||||||| |||||||  |||||||||||    
T  30763512 atcaagtaagtgttttgaatcctattgcattg 30763543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 192 - 255
Target Start/End: Original strand, 32691444 - 32691506
Alignment:
Q  192 gttgaatttcgattatataggttttattgattttataatatgttaggataatttaggttagaat 255  Q
    ||| |||||||||||||| | |||  |||||||||| ||||||||||||| |||||||||||||    
T  32691444 gttaaatttcgattatattgatttg-ttgattttatgatatgttaggatagtttaggttagaat 32691506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 255
Target Start/End: Complemental strand, 6206835 - 6206798
Alignment:
Q  218 ttgattttataatatgttaggataatttaggttagaat 255  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  6206835 ttgattttatgatatgttaggatagtttaggttagaat 6206798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 255
Target Start/End: Complemental strand, 11693802 - 11693765
Alignment:
Q  218 ttgattttataatatgttaggataatttaggttagaat 255  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  11693802 ttgattttatgatatgttaggatagtttaggttagaat 11693765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 227
Target Start/End: Original strand, 35019857 - 35019885
Alignment:
Q  199 ttcgattatataggttttattgattttat 227  Q
    |||||||||||||||||||||||||||||    
T  35019857 ttcgattatataggttttattgattttat 35019885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 96; Significance: 4e-47; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 13 - 172
Target Start/End: Original strand, 49924936 - 49925095
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||||| | || |||||||||||||||||||||||||||||| |||||||  || |||| ||||||| |||||||||||| |||||||| |||||    
T  49924936 tgttataagaacaaaacagacataggagtttccaaaactccattgttgcgttttttattctccttggtgcgattttgagcaatttgaagtcattccaagc 49925035  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    |||||||||||||||||| ||||||| ||||||||  ||||||||||| |||||||||||    
T  49925036 caatttcaatcacaaaaacaagtaagatttttgaatcctattgcattgttgttttgtggt 49925095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 40 - 255
Target Start/End: Complemental strand, 41804000 - 41803783
Alignment:
Q  40 gtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaataagtaagt 139  Q
    |||| ||||||||||||||||| |||||  || |||||||||| | |||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  41804000 gttttcaaaactccattgttacattttttattctcctaggtgcaattttgagcaatttgaagtcattccaagccaatttcaatcacaaaaataagtaagt 41803901  T
Q  140 tttttgaactctattgcattgctgttttgtggttaaa--nnnnnnnnnnnnnnngttgaatttcgattatataggttttattgattttataatatgttag 237  Q
    ||||||||  ||||||||||| |||||||||||  ||                 ||| |||||||||||||||||||||||||||||||| |||||||||    
T  41803900 tttttgaatcctattgcattgttgttttgtggtcgaattgtttgttttttttttgttaaatttcgattatataggttttattgattttatgatatgttag 41803801  T
Q  238 gataatttaggttagaat 255  Q
    |||| |||||||||||||    
T  41803800 gatagtttaggttagaat 41803783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 13 - 172
Target Start/End: Original strand, 14172167 - 14172326
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||||| |||| ||||||||||||||||||||||  |||||||||||||| | | |||||||||||| ||| |||||||||||  |||| |||||    
T  14172167 tgttataagaacagaacagacataggagtttccaaaactttattgttacgttttttgatctcctaggtgcgattttcagcaatttcaaaccattccaagc 14172266  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    |||||||||||||||||| | ||||||||||||||  ||||||||||| |||||||||||    
T  14172267 caatttcaatcacaaaaacaggtaagttttttgaatcctattgcattgttgttttgtggt 14172326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 13 - 172
Target Start/End: Complemental strand, 51271584 - 51271425
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||||| |||| |||||||||||||||||||||| ||||||| |||||||  || |||| | ||||| |||||||||||| |||||||| |||||    
T  51271584 tgttataagaacagaacagacataggagtttccaaaacttcattgttgcgttttttattctccttgctgcgattttgagcaatttgaagtcattccaagc 51271485  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    |||||||||||||||||| ||||||||||| ||||  ||||||||||| |||||||||||    
T  51271484 caatttcaatcacaaaaacaagtaagttttatgaatcctattgcattgttgttttgtggt 51271425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 13 - 167
Target Start/End: Complemental strand, 44598899 - 44598745
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||||| |||| ||||||||||||||| |||||||||||||||||||||| | | ||| |||||||| ||||||| ||||||||||||| |||||    
T  44598899 tgttataagaacagaacagacataggagtttcaaaaactccattgttacgttttttgatctccaaggtgcgattttgagctatttcaagtcattccaagc 44598800  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgtttt 167  Q
    |||||||||| ||||||| ||||||||||||| ||  ||||||||||| ||||||    
T  44598799 caatttcaataacaaaaacaagtaagtttttttaatcctattgcattgttgtttt 44598745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 13 - 173
Target Start/End: Original strand, 27485113 - 27485272
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||| | | ||| | |||||| ||||||| |||||||| |||| |||||    
T  27485113 tgttataagaatagaacagacataggagtttccaaaactccattgttacgttttttgatctccaatgtgcgattttgagctatttcaagccattccaagc 27485212  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggtt 173  Q
    |||||||||||||||||| |||||| |||||| ||  ||||||||||| ||||||| ||||    
T  27485213 caatttcaatcacaaaaacaagtaa-tttttttaatcctattgcattgttgttttgcggtt 27485272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 13 - 172
Target Start/End: Complemental strand, 36911690 - 36911530
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttg-gttttcctaggtgcgaatttgagcaatttcaagtcatttcaag 111  Q
    ||||||||||| | |||||||||| |||||||||||||||||||||||| |||||  | | |||||||||||| ||| |||||||||||| |||||||||    
T  36911690 tgttataagaacataatagacatatgagtttccaaaactccattgttacatttttttgatctcctaggtgcgattttcagcaatttcaagccatttcaag 36911591  T
Q  112 ccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    ||||||||||||||||||| | ||||||||||||||   |||||||||| |||||||||||    
T  36911590 ccaatttcaatcacaaaaacaggtaagttttttgaatcttattgcattgttgttttgtggt 36911530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 49398463 - 49398307
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||||| | || ||||||||||||||||||||||| ||||||||||||||  || |||||||||| | |||||||||||| |||||||| ||| |    
T  49398463 tgttataagaacataacagacataggagtttccaaaactc-attgttacgttttttattctcctaggtgctattttgagcaatttgaagtcattccaaac 49398365  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtg 170  Q
    |||||||||||||||||| ||||||||||||||||   |||||||||| |||||||||    
T  49398364 caatttcaatcacaaaaacaagtaagttttttgaatcttattgcattgttgttttgtg 49398307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 13 - 172
Target Start/End: Original strand, 42570201 - 42570361
Alignment:
Q  13 tgttataagaatagaatagacata-ggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaag 111  Q
    ||||||||| | |||| ||||||  |||||||||||||||||||||||| ||||||  || |||||||||||| |||||||||||| ||||||||  |||    
T  42570201 tgttataagtacagaacagacatttggagtttccaaaactccattgttatgttttttattctcctaggtgcgattttgagcaatttgaagtcattcaaag 42570300  T
Q  112 ccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
     |||||||||||||||||| ||||||||||||||||   |||||||||| |||||||||||    
T  42570301 tcaatttcaatcacaaaaacaagtaagttttttgaatcttattgcattgttgttttgtggt 42570361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 13 - 173
Target Start/End: Original strand, 44336329 - 44336489
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||||| |||| ||||||||||||||||||||||| |||||||||||||| | | ||| | |||| | ||||||  |||||||| |||| |||||    
T  44336329 tgttataagaacagaacagacataggagtttccaaaactcaattgttacgttttttgatctccaatgtgcaattttgagttatttcaagccattccaagc 44336428  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggtt 173  Q
    |||||||||||||||||| ||||||||||||| ||  ||||||||||| ||||||| ||||    
T  44336429 caatttcaatcacaaaaacaagtaagtttttttaatcctattgcattgttgttttgcggtt 44336489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 13 - 172
Target Start/End: Original strand, 26633606 - 26633766
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttt-tcctaggtgcgaatttgagcaatttcaagtcatttcaag 111  Q
    ||||||||| | |||| | |||| |||||||||||||||||| ||||||||||||   || |||||| ||||| |||||||||||| |||||||| ||||    
T  26633606 tgttataagtacagaacatacattggagtttccaaaactccaatgttacgtttttttattctcctagatgcgattttgagcaatttgaagtcattccaag 26633705  T
Q  112 ccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    ||||||||||||||||||| || |||||||||| ||  ||||||||||| |||||||||||    
T  26633706 ccaatttcaatcacaaaaacaactaagtttttttaatcctattgcattgttgttttgtggt 26633766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 25 - 171
Target Start/End: Complemental strand, 13149029 - 13148889
Alignment:
Q  25 agaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatca 124  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||| |||||||| ||| ||||||      ||||||||| || ||||||||||||||    
T  13149029 agaacagacataggagtttccaaaactccattgttatgtttttggttctcctaggtacgattttgag------caagtcattccaggccaatttcaatca 13148936  T
Q  125 caaaaataagtaagttttttgaactctattgcattgctgttttgtgg 171  Q
    |||||| ||||||||||||| ||  ||||||||| | ||||||||||    
T  13148935 caaaaacaagtaagtttttttaatcctattgcatcgttgttttgtgg 13148889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 34 - 173
Target Start/End: Original strand, 29760604 - 29760743
Alignment:
Q  34 ataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaataa 133  Q
    |||||||||| |||||||||||||||||||||||   | ||| |||||||| ||||||  |||||||||||||  |||||||||||||||||||||| ||    
T  29760604 ataggagttttcaaaactccattgttacgtttttttatctccaaggtgcgattttgagttatttcaagtcattctaagccaatttcaatcacaaaaagaa 29760703  T
Q  134 gtaagttttttgaactctattgcattgctgttttgtggtt 173  Q
    ||||||||||| ||  ||||||||||| ||||||| ||||    
T  29760704 gtaagtttttttaatcctattgcattgttgttttgcggtt 29760743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 32 - 172
Target Start/End: Original strand, 13633964 - 13634104
Alignment:
Q  32 acataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaat 131  Q
    |||||||||||||||||||||||||||| ||||||||  | ||| || ||||| |||||   |||| ||| |||| |||||||||||||||||||||||     
T  13633964 acataggagtttccaaaactccattgttgcgtttttgagtatccaagttgcgattttgaatcatttgaagacattacaagccaatttcaatcacaaaaac 13634063  T
Q  132 aagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    ||||||||||||||||  ||||||||||| || ||||||||    
T  13634064 aagtaagttttttgaatcctattgcattgttgctttgtggt 13634104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 13 - 172
Target Start/End: Original strand, 35524818 - 35524967
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||||| |||| ||||||  ||||||| |||||||||||||||||||||| | | ||| |||||||| ||||||||||||          |||||    
T  35524818 tgttataagaacagaacagacatgagagtttcaaaaactccattgttacgttttttgatctccaaggtgcgattttgagcaattt----------caagc 35524907  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    |||||| |||||||||||||| |||||||||||||  |||||||||||||||||||||||    
T  35524908 caatttaaatcacaaaaataattaagttttttgaatcctattgcattgctgttttgtggt 35524967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 31 - 136
Target Start/End: Complemental strand, 29437995 - 29437890
Alignment:
Q  31 gacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaa 130  Q
    ||||||||||||||||||||||||||||| |||||||  || |||| ||||||| |||||||||||| |||||||| ||| |||||||||||||||||||    
T  29437995 gacataggagtttccaaaactccattgttgcgttttttattctccttggtgcgattttgagcaatttgaagtcattccaaaccaatttcaatcacaaaaa 29437896  T
Q  131 taagta 136  Q
     |||||    
T  29437895 caagta 29437890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 33 - 172
Target Start/End: Original strand, 19161991 - 19162130
Alignment:
Q  33 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 132  Q
    ||||||||||||||||||||||||||| | |||||  || ||| |||||||| |||||   |||| ||| |||| ||||||||||||||||||||||| |    
T  19161991 cataggagtttccaaaactccattgttgcattttttattatccaaggtgcgattttgaatcatttgaagccattccaagccaatttcaatcacaaaaaca 19162090  T
Q  133 agtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    |||||||||||||||  ||||||||||  || ||||||||    
T  19162091 agtaagttttttgaatcctattgcatttttgctttgtggt 19162130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 33 - 172
Target Start/End: Complemental strand, 49429135 - 49428996
Alignment:
Q  33 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 132  Q
    ||||||||||||||||||||||||||| |||||||  || ||| |||||||| ||| ||  |||| ||||||||  |||||||||||||||||||||| |    
T  49429135 cataggagtttccaaaactccattgttgcgttttttattatccaaggtgcgattttaagtcatttgaagtcattctaagccaatttcaatcacaaaaaca 49429036  T
Q  133 agtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    ||||||||||||||   || |||||||| || ||||||||    
T  49429035 agtaagttttttgattacttttgcattgttgctttgtggt 49428996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 14 - 172
Target Start/End: Complemental strand, 6437532 - 6437374
Alignment:
Q  14 gttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagcc 113  Q
    |||||||||| |||| || |||||||||||| |||||||||||||| || ||||  || || ||||||||| |||  |  ||| |||| |||| |||| |    
T  6437532 gttataagaacagaacaggcataggagtttctaaaactccattgttgcggttttcattctcttaggtgcgattttctgtcattccaagccattacaagtc 6437433  T
Q  114 aatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    ||||||||||||||||| |||||| |||||||||  ||||||||||| |||||||||||    
T  6437432 aatttcaatcacaaaaacaagtaaattttttgaatcctattgcattgttgttttgtggt 6437374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 23344380 - 23344242
Alignment:
Q  32 acataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaat 131  Q
    |||||||||||||||||||| ||||||||||||||| | || | ||||||||||||| |  ||    ||| |||| |||||||||||||| |||||||      
T  23344380 acataggagtttccaaaacttcattgttacgttttttgcttccataggtgcgaatttcacaaagcataagccattccaagccaatttcaagcacaaaatc 23344281  T
Q  132 aagtaagttttttgaactctattgcattgctgttttgtg 170  Q
    |||||||||||||||| |||||||||||||| |||||||    
T  23344280 aagtaagttttttgaattctattgcattgctattttgtg 23344242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 38043549 - 38043687
Alignment:
Q  32 acataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaat 131  Q
    |||||||||||||||||||||||||||||||||||| | || | ||||||||||||| |  ||    |||||||| |||||||||||||| |||||||      
T  38043549 acataggagtttccaaaactccattgttacgttttttgcttccataggtgcgaatttcacaaaccataagtcattccaagccaatttcaaacacaaaatc 38043648  T
Q  132 aagtaagttttttgaactctattgcattgctgttttgtg 170  Q
    ||||||||||||||||  ||||||| ||||| |||||||    
T  38043649 aagtaagttttttgaatcctattgcgttgctattttgtg 38043687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 33 - 170
Target Start/End: Original strand, 39855589 - 39855727
Alignment:
Q  33 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaat- 131  Q
    ||||||||||||||||||||||||||||||||||| | || | ||||||||||||| |  ||    |||||||| |||||||||||||| |||||||||     
T  39855589 cataggagtttccaaaactccattgttacgttttttgcttccataggtgcgaatttcacaaaccataagtcattccaagccaatttcaagcacaaaaatc 39855688  T
Q  132 aagtaagttttttgaactctattgcattgctgttttgtg 170  Q
    ||||||||||||||||  ||||||| ||||| |||||||    
T  39855689 aagtaagttttttgaatcctattgcgttgctattttgtg 39855727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 8 - 173
Target Start/End: Original strand, 24362363 - 24362525
Alignment:
Q  8 tgatctgttataagaatagaat-agacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatt 106  Q
    |||||||||||||||| | ||  ||||||||||||||||||||||||  |||||||| ||||||| ||||| |||||| ||| ||| |||||||| ||||    
T  24362363 tgatctgttataagaaaaaaaacagacataggagtttccaaaactcctctgttacgtgtttggttctcctatgtgcgattttcagccatttcaagccatt 24362462  T
Q  107 tcaagccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggtt 173  Q
     ||| | |||||||||| ||||||     ||||||||||||  ||||||||||| ||||||||||||    
T  24362463 ccaatctaatttcaatcgcaaaaa----caagttttttgaatcctattgcattgttgttttgtggtt 24362525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 32 - 147
Target Start/End: Complemental strand, 48228286 - 48228170
Alignment:
Q  32 acataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcaca-aaaa 130  Q
    |||||||||||||||||||||||||||| |||||||  || ||| |||||||| ||||||  |||| ||| |||| ||||||||||||||||||| ||||    
T  48228286 acataggagtttccaaaactccattgttgcgttttttattatccaaggtgcgattttgagtcatttgaaggcattccaagccaatttcaatcacaaaaaa 48228187  T
Q  131 taagtaagttttttgaa 147  Q
     ||||||||||||||||    
T  48228186 caagtaagttttttgaa 48228170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 33 - 167
Target Start/End: Original strand, 33285790 - 33285924
Alignment:
Q  33 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaat-ttcaagtcatttcaagccaatttcaatcacaaaaat 131  Q
    ||||||||||||||||||||||||||||||||||| | || | ||||||||||||| | ||||    ||| |||| |||||||||||||| |||||||      
T  33285790 cataggagtttccaaaactccattgttacgttttttgcttccataggtgcgaatttca-caatgcataagccattccaagccaatttcaagcacaaaatc 33285888  T
Q  132 aagtaagttttttgaactctattgcattgctgtttt 167  Q
    ||||||||||||||||  ||||||||||||| ||||    
T  33285889 aagtaagttttttgaatcctattgcattgctatttt 33285924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 14441009 - 14440872
Alignment:
Q  32 acataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaat 131  Q
    ||||||||||||||||||||||| ||||| |||||||| ||||  |||||||||||| | |||    ||| |||| |||||||||||||| |||||||      
T  14441009 acataggagtttccaaaactccactgttatgtttttggatttctcaggtgcgaatttca-caagcataagccattccaagccaatttcaagcacaaaatc 14440911  T
Q  132 aagtaagttttttgaactctattgcattgctgttttgtg 170  Q
    ||||||||||||||||  ||||||||||| | |||||||    
T  14440910 aagtaagttttttgaatcctattgcattgttattttgtg 14440872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 26497882 - 26497804
Alignment:
Q  11 tctgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttg 89  Q
    ||||||||||||| |||| | |||||| |||||||||||||||| |||||||||||||||| |||||||||||| ||||    
T  26497882 tctgttataagaacagaacatacatagaagtttccaaaactccagtgttacgtttttggttctcctaggtgcgattttg 26497804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 196 - 256
Target Start/End: Complemental strand, 13974534 - 13974474
Alignment:
Q  196 aatttcgattatataggttttattgattttataatatgttaggataatttaggttagaatt 256  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||    
T  13974534 aatttcgattatataggttttattgattttatgatatgttaggatagttttggttagaatt 13974474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 101 - 172
Target Start/End: Complemental strand, 18975036 - 18974965
Alignment:
Q  101 gtcatttcaagccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    |||||| |||||||||||| |||||||||| ||||||||||||||||  ||||||||||| |||||||||||    
T  18975036 gtcattccaagccaatttcgatcacaaaaacaagtaagttttttgaatcctattgcattgttgttttgtggt 18974965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 170
Target Start/End: Original strand, 49260007 - 49260164
Alignment:
Q  11 tctgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaa 110  Q
    ||||||||| ||| |||| || ||||| ||||||||||||||||||||||||||||||| ||||  | |||||  ||| |||||     || |||| |||    
T  49260007 tctgttatatgaacagaacag-catagcagtttccaaaactccattgttacgtttttggatttctcaagtgcg-ttttcagcaaacatcagccattccaa 49260104  T
Q  111 gccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtg 170  Q
    ||||||||||| |||||||  ||||||||||||||||   |||||||||||| |||||||    
T  49260105 gccaatttcaagcacaaaatcaagtaagttttttgaatcatattgcattgctattttgtg 49260164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 129
Target Start/End: Original strand, 12789787 - 12789904
Alignment:
Q  11 tctgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaa 110  Q
    ||||||||| ||| |||| ||| |||||||||||||||||||||||||||||||||| | |||| ||||||||||||| |  ||    ||| |||| |||    
T  12789787 tctgttatatgaacagaacaga-ataggagtttccaaaactccattgttacgttttttgctttcataggtgcgaatttcacaaagcataagccattccaa 12789885  T
Q  111 gccaatttcaatcacaaaa 129  Q
    ||||||||||| |||||||    
T  12789886 gccaatttcaagcacaaaa 12789904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 108 - 172
Target Start/End: Original strand, 46141941 - 46142005
Alignment:
Q  108 caagccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    ||||||||||||||||||||||| |||| |||||||||||  ||||||||||| |||||||||||    
T  46141941 caagccaatttcaatcacaaaaacaagtgagttttttgaatcctattgcattgttgttttgtggt 46142005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 157
Target Start/End: Complemental strand, 13285253 - 13285196
Alignment:
Q  100 agtcatttcaagccaatttcaatcacaaaaataagtaagttttttgaactctattgca 157  Q
    |||||||||||| |||||||||||||||||  |||||||| ||||||| |||||||||    
T  13285253 agtcatttcaaggcaatttcaatcacaaaatcaagtaagtgttttgaattctattgca 13285196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 256
Target Start/End: Original strand, 14172353 - 14172421
Alignment:
Q  196 aatttcgattatataggttttattgattttataat--------atgttaggataatttaggttagaatt 256  Q
    |||||||||||||||||||||||||||||||| ||        ||||||||||||||||||||||||||    
T  14172353 aatttcgattatataggttttattgattttatgatttcatgatatgttaggataatttaggttagaatt 14172421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 205 - 251
Target Start/End: Complemental strand, 18974915 - 18974869
Alignment:
Q  205 tatataggttttattgattttataatatgttaggataatttaggtta 251  Q
    ||||||||||||||||||||||| ||||| ||||||| |||||||||    
T  18974915 tatataggttttattgattttatgatatgctaggatagtttaggtta 18974869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 40531797 - 40531935
Alignment:
Q  32 acataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaat 131  Q
    ||||||||||||||||||||| |||||||||| ||| | || | ||||||||||||| |  ||    | ||||||  | ||||| ||||| || ||||      
T  40531797 acataggagtttccaaaactctattgttacgtgttttgcttccataggtgcgaatttcacaaagcatacgtcattctacgccaaattcaagcataaaatc 40531896  T
Q  132 aagtaagttttttgaactctattgcattgctgttttgtg 170  Q
    ||||||||||||||||   |||||||||||| |||||||    
T  40531897 aagtaagttttttgaatcatattgcattgctattttgtg 40531935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 59
Target Start/End: Original strand, 16530628 - 16530677
Alignment:
Q  10 atctgttataagaatagaatagacataggagtttccaaaactccattgtt 59  Q
    ||||||||||| ||  ||| ||||||||||||||||||||||||||||||    
T  16530628 atctgttataaaaacggaacagacataggagtttccaaaactccattgtt 16530677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 255
Target Start/End: Complemental strand, 48228090 - 48228053
Alignment:
Q  218 ttgattttataatatgttaggataatttaggttagaat 255  Q
    |||||||||| |||||||||||||||||||||||||||    
T  48228090 ttgattttatgatatgttaggataatttaggttagaat 48228053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 39063288 - 39063336
Alignment:
Q  11 tctgttataagaatagaatagacataggagtttccaaaactccattgtt 59  Q
    ||||||||||||| |||| ||||||| |||||||||||||| |||||||    
T  39063288 tctgttataagaacagaacagacataagagtttccaaaacttcattgtt 39063336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 219 - 255
Target Start/End: Complemental strand, 49398233 - 49398197
Alignment:
Q  219 tgattttataatatgttaggataatttaggttagaat 255  Q
    ||||||||||||||||||||||| |||||||||||||    
T  49398233 tgattttataatatgttaggatagtttaggttagaat 49398197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 51271386 - 51271350
Alignment:
Q  220 gattttataatatgttaggataatttaggttagaatt 256  Q
    |||||||| ||||||||||||||||||||||||||||    
T  51271386 gattttatgatatgttaggataatttaggttagaatt 51271350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 74
Target Start/End: Complemental strand, 13287543 - 13287484
Alignment:
Q  15 ttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttc 74  Q
    ||||| ||| |||| |||||||||||||| ||||| ||||||||| ||||||||| ||||    
T  13287543 ttatatgaacagaacagacataggagttttcaaaattccattgttgcgtttttggatttc 13287484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 227
Target Start/End: Original strand, 46142032 - 46142063
Alignment:
Q  196 aatttcgattatataggttttattgattttat 227  Q
    ||||||||||||||||||||||||||||||||    
T  46142032 aatttcgattatataggttttattgattttat 46142063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 19260969 - 19261035
Alignment:
Q  18 taagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcga 84  Q
    |||||| |||| ||||||| || ||||||||||||||||||| || ||||| ||| | |||||||||    
T  19260969 taagaacagaacagacatatgaatttccaaaactccattgttgcggttttgatttccataggtgcga 19261035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 256
Target Start/End: Original strand, 44336548 - 44336586
Alignment:
Q  218 ttgattttataatatgttaggataatttaggttagaatt 256  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  44336548 ttgattttatgatatgttaggatagtttaggttagaatt 44336586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 14771204 - 14771249
Alignment:
Q  15 ttataagaatagaataga-cataggagtttccaaaactccattgtt 59  Q
    |||||||||||||| ||| | |||||||||||||||||||||||||    
T  14771204 ttataagaatagaacagaacctaggagtttccaaaactccattgtt 14771249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 255
Target Start/End: Original strand, 19162191 - 19162228
Alignment:
Q  218 ttgattttataatatgttaggataatttaggttagaat 255  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  19162191 ttgattttatgatatgttaggatagtttaggttagaat 19162228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 255
Target Start/End: Original strand, 27485333 - 27485370
Alignment:
Q  218 ttgattttataatatgttaggataatttaggttagaat 255  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  27485333 ttgattttatgatatgttaggatagtttaggttagaat 27485370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 256
Target Start/End: Original strand, 29760815 - 29760852
Alignment:
Q  219 tgattttataatatgttaggataatttaggttagaatt 256  Q
    ||||||||| ||||||||||||| ||||||||||||||    
T  29760815 tgattttatgatatgttaggatagtttaggttagaatt 29760852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 256
Target Start/End: Complemental strand, 36911457 - 36911420
Alignment:
Q  219 tgattttataatatgttaggataatttaggttagaatt 256  Q
    |||||| || ||||||||||||||||||||||||||||    
T  36911457 tgatttcatgatatgttaggataatttaggttagaatt 36911420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 256
Target Start/End: Original strand, 42570409 - 42570446
Alignment:
Q  219 tgattttataatatgttaggataatttaggttagaatt 256  Q
    ||||||||| ||||||||||||| ||||||||||||||    
T  42570409 tgattttatgatatgttaggatagtttaggttagaatt 42570446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 255
Target Start/End: Complemental strand, 6437303 - 6437267
Alignment:
Q  219 tgattttataatatgttaggataatttaggttagaat 255  Q
    ||||||||| ||||||||||||| |||||||||||||    
T  6437303 tgattttatgatatgttaggatagtttaggttagaat 6437267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 227
Target Start/End: Original strand, 42570381 - 42570409
Alignment:
Q  199 ttcgattatataggttttattgattttat 227  Q
    |||||||||||||||||||||||||||||    
T  42570381 ttcgattatataggttttattgattttat 42570409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 255
Target Start/End: Complemental strand, 49428926 - 49428890
Alignment:
Q  219 tgattttataatatgttaggataatttaggttagaat 255  Q
    ||||||||| ||||||||||||| |||||||||||||    
T  49428926 tgattttatgatatgttaggatagtttaggttagaat 49428890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 91; Significance: 4e-44; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 15 - 173
Target Start/End: Complemental strand, 41276877 - 41276719
Alignment:
Q  15 ttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagcca 114  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||||||| | | ||| |||| ||| ||||||| |||||||| |||| |||||||    
T  41276877 ttataagaacagaacagacataggagtttccaaaactccattgttacgttttttgatctccaaggtacgattttgagctatttcaagccattccaagcca 41276778  T
Q  115 atttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggtt 173  Q
    |||||||||||||||| ||||||||||||| ||  ||||||||||| ||||||| ||||    
T  41276777 atttcaatcacaaaaacaagtaagtttttttaatcctattgcattgttgttttgcggtt 41276719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 13 - 173
Target Start/End: Complemental strand, 26455669 - 26455509
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||| | | ||| |||||||| ||||||| |||||||||||||   |||    
T  26455669 tgttataagaacagaataggcataggagtttccaaaactccattgttacattttttgatctccaaggtgcgattttgagctatttcaagtcattctcagc 26455570  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggtt 173  Q
    |||||||||||||||||| ||||||||||||| ||  ||||||||||| ||||||| ||||    
T  26455569 caatttcaatcacaaaaacaagtaagtttttttaatcctattgcattgttgttttgcggtt 26455509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 13 - 172
Target Start/End: Complemental strand, 22550858 - 22550699
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||||| ||||  ||||||||||||||||||||||||||||| |||||||| || |||| | ||||  |||||||||||| ||| |||| |||||    
T  22550858 tgttataagaacagaacggacataggagtttccaaaactccattgttgcgtttttgattatccttgctgcggttttgagcaatttgaagccattccaagc 22550759  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    |||||||||||||||||| ||||||||||| ||||  ||||||||||| |||||||||||    
T  22550758 caatttcaatcacaaaaacaagtaagttttctgaatcctattgcattgttgttttgtggt 22550699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 13 - 172
Target Start/End: Complemental strand, 28168596 - 28168437
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||||| |||| ||||||| |||||| ||||||| ||||||| |||||||  || |||| ||||||| ||||||||||||||||||||| |||||    
T  28168596 tgttataagaacagaacagacatatgagttttcaaaacttcattgttgcgttttttattctcctgggtgcgattttgagcaatttcaagtcattccaagc 28168497  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    |||||||||||||||||| ||||||||||||||| | |||||| |||| |||||| ||||    
T  28168496 caatttcaatcacaaaaacaagtaagttttttgagccctattgaattgttgttttttggt 28168437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 44052219 - 44052064
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||||||| ||  |||||||||||||||||||||| |||||||||||||| | | ||| |||||| | ||||||| |||||||| ||||||||||    
T  44052219 tgttataagaatataactgacataggagtttccaaaactctattgttacgttttttgatctccaaggtgccattttgagctatttcaagccatttcaagc 44052120  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttg 168  Q
    |||||||||||||||||| ||||||||||||| ||  ||||||||||| |||||||    
T  44052119 caatttcaatcacaaaaacaagtaagtttttttaatcctattgcattgttgttttg 44052064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 34 - 256
Target Start/End: Original strand, 41855464 - 41855687
Alignment:
Q  34 ataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaataa 133  Q
    |||||||||| ||||||||||||||| |||||||  || |||| ||||||| |||||||||||| |||||||| ||| ||||||||||||||||||| ||    
T  41855464 ataggagttttcaaaactccattgttgcgttttttattctccttggtgcgattttgagcaatttgaagtcattccaaaccaatttcaatcacaaaaacaa 41855563  T
Q  134 gtaagttttttgaactctattgcattgctgttttgtggttaaa-nnnnnnnnnnnnnnngttgaatttcgattatataggttttattgattttataatat 232  Q
    ||||||||||||||  | ||||||||| ||||||||||| |||                ||| |||||| ||||||||||||||||||||||||| ||||    
T  41855564 gtaagttttttgaatcccattgcattgttgttttgtggtcaaattttttttttttttttgttaaatttcaattatataggttttattgattttatgatat 41855663  T
Q  233 gttaggataatttaggttagaatt 256  Q
    ||||||||| |||| |||||||||    
T  41855664 gttaggatattttaagttagaatt 41855687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 13 - 172
Target Start/End: Complemental strand, 42605228 - 42605069
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||||| | || ||| |||| ||||||||||||||||||||| |||||||  || |||| ||||||| |||||||||||| |||||||| |||||    
T  42605228 tgttataagaacataacagatatagtagtttccaaaactccattgttgcgttttttattctccttggtgcgattttgagcaatttgaagtcattccaagc 42605129  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    |||||||||||||| ||||||||||||||||||||   ||||||| || |||||||||||    
T  42605128 caatttcaatcacagaaataagtaagttttttgaatcatattgcactgttgttttgtggt 42605069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 34 - 172
Target Start/End: Complemental strand, 40704132 - 40703995
Alignment:
Q  34 ataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaataa 133  Q
    |||||||||||||||||||||||||| ||||||| ||| | ||  |||||| |||||||||||| |||||||| ||||||||||||||||||||||| ||    
T  40704132 ataggagtttccaaaactccattgttgcgttttttgttcttctttgtgcgattttgagcaatttgaagtcattccaagccaatttcaatcacaaaaacaa 40704033  T
Q  134 gtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    |||||| |||||||   |||||||||| |||||||||||    
T  40704032 gtaagt-ttttgaatcatattgcattgttgttttgtggt 40703995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 32 - 172
Target Start/End: Original strand, 41016512 - 41016652
Alignment:
Q  32 acataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaat 131  Q
    |||||||||||||||||||||||||||| |||||||  || ||| |||||||| ||||||  |||| ||| |||| |||||||||||||||||||||||     
T  41016512 acataggagtttccaaaactccattgttgcgttttttattatccaaggtgcgattttgagtcatttgaagccattccaagccaatttcaatcacaaaaac 41016611  T
Q  132 aagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    || |||||||||||||  ||||||||||| || ||||||||    
T  41016612 aattaagttttttgaatcctattgcattgttgctttgtggt 41016652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 33 - 172
Target Start/End: Complemental strand, 45066335 - 45066196
Alignment:
Q  33 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 132  Q
    |||||||||||||||||||||||||||  |||||   || ||| |||||||| ||||||  |||| ||| |||| ||||||||||||||||||||||| |    
T  45066335 cataggagtttccaaaactccattgttgtgttttgaattatccaaggtgcgattttgagtcatttgaagccattacaagccaatttcaatcacaaaaaca 45066236  T
Q  133 agtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    |||||||||||||||  ||||||||||| || ||||||||    
T  45066235 agtaagttttttgaatcctattgcattgttgctttgtggt 45066196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 33 - 172
Target Start/End: Original strand, 483915 - 484054
Alignment:
Q  33 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 132  Q
    ||||||||||||||||||||||||||| |||||||  ||||   |||||||| ||||||  |||| ||| ||||  |||||||||| ||||||||||| |    
T  483915 cataggagtttccaaaactccattgttgcgtttttaatttttgaaggtgcgattttgagtcatttgaagccattagaagccaattttaatcacaaaaaca 484014  T
Q  133 agtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    |||||||||||||||  ||||||||||| || ||||||||    
T  484015 agtaagttttttgaatcctattgcattgttgctttgtggt 484054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 33 - 172
Target Start/End: Original strand, 15030983 - 15031121
Alignment:
Q  33 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 132  Q
    ||||||||||||||||| ||||||||| |||||||  || ||| |||||||| ||||||  |||| ||| |||| ||||||||||||||||||||||| |    
T  15030983 cataggagtttccaaaattccattgttgcgtttttaattatccaaggtgcgattttgagtcatttgaagccattacaagccaatttcaatcacaaaaaca 15031082  T
Q  133 agtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    |||||| ||||||||  ||||||||||| || ||||||||    
T  15031083 agtaag-tttttgaatcctattgcattgttgctttgtggt 15031121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 199 - 256
Target Start/End: Complemental strand, 42605020 - 42604963
Alignment:
Q  199 ttcgattatataggttttattgattttataatatgttaggataatttaggttagaatt 256  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  42605020 ttcgattatataggttttattgattttatgatatgttaggataatttaggttagaatt 42604963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 170
Target Start/End: Complemental strand, 26488440 - 26488303
Alignment:
Q  33 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 132  Q
    ||||||||||||||||||||||||||||||||||| | || | |||||||||| || |  ||    ||| |||| ||||| |||||||| |||||||  |    
T  26488440 cataggagtttccaaaactccattgttacgttttttgcttccataggtgcgaaattcacaaaccataagccattccaagctaatttcaagcacaaaatca 26488341  T
Q  133 agtaagttttttgaactctattgcattgctgttttgtg 170  Q
    |||||||||||||||  ||||||| ||||| |||||||    
T  26488340 agtaagttttttgaatcctattgcgttgctattttgtg 26488303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 170
Target Start/End: Original strand, 38032310 - 38032447
Alignment:
Q  33 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 132  Q
    |||||||||||||||||||| ||||||| |||||||| ||||  | |||||  ||| |||||     || |||| |||||||||||||| |||||||  |    
T  38032310 cataggagtttccaaaactcaattgttatgtttttggatttctcatgtgcgtttttcagcaaacatcagccattccaagccaatttcaagcacaaaatca 38032409  T
Q  133 agtaagttttttgaactctattgcattgctgttttgtg 170  Q
    |||||||||||||||  ||||||||||||| |||||||    
T  38032410 agtaagttttttgaatcctattgcattgctattttgtg 38032447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 103 - 172
Target Start/End: Complemental strand, 38872845 - 38872776
Alignment:
Q  103 catttcaagccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||  ||||||||||| |||||||||||    
T  38872845 cattccaagccaatttcaatcacaaaaacaagtaagttttttgaatcctattgcattgttgttttgtggt 38872776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 103 - 173
Target Start/End: Original strand, 18438793 - 18438864
Alignment:
Q  103 catttcaagccaatttcaatcacaaaaataagtaagttttttgaa-ctctattgcattgctgttttgtggtt 173  Q
    |||| ||||||||||||||||||||||| |||||||||||||||| | ||||||||||| ||||||||||||    
T  18438793 cattccaagccaatttcaatcacaaaaacaagtaagttttttgaatccctattgcattgttgttttgtggtt 18438864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 170
Target Start/End: Original strand, 19241142 - 19241214
Alignment:
Q  98 caagtcatttcaagccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtg 170  Q
    |||| |||| |||||||||||||| |||||||  ||||||||||||||||   |||||||||||| |||||||    
T  19241142 caagccattccaagccaatttcaaacacaaaatcaagtaagttttttgaatcatattgcattgctattttgtg 19241214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 170
Target Start/End: Original strand, 19314326 - 19314398
Alignment:
Q  98 caagtcatttcaagccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtg 170  Q
    |||| |||| |||||||||||||| |||||||  ||||||||||||||||   |||||||||||| |||||||    
T  19314326 caagccattccaagccaatttcaaacacaaaatcaagtaagttttttgaatcatattgcattgctattttgtg 19314398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 170
Target Start/End: Complemental strand, 26488256 - 26488185
Alignment:
Q  99 aagtcatttcaagccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtg 170  Q
    |||||||| ||||| |||||||| |||||||  ||||||||||||||||  ||||||| ||||| |||||||    
T  26488256 aagtcattccaagctaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtg 26488185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 205 - 256
Target Start/End: Complemental strand, 38872728 - 38872677
Alignment:
Q  205 tatataggttttattgattttataatatgttaggataatttaggttagaatt 256  Q
    |||||| |||| ||||||||||| ||||||||||||| ||||||||||||||    
T  38872728 tatataagtttgattgattttatgatatgttaggatagtttaggttagaatt 38872677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 91
Target Start/End: Complemental strand, 22519536 - 22519478
Alignment:
Q  33 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgag 91  Q
    ||||||||||||||||||||||||||| |||||||  |||| | |||||||| ||||||    
T  22519536 cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcgattttgag 22519478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 199 - 256
Target Start/End: Complemental strand, 22550657 - 22550601
Alignment:
Q  199 ttcgattatataggttttattgattttataatatgttaggataatttaggttagaatt 256  Q
    ||||||||||| | |||||| |||||||| ||||||||||||| ||||||||||||||    
T  22550657 ttcgattatattgattttat-gattttatgatatgttaggatagtttaggttagaatt 22550601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 255
Target Start/End: Original strand, 484114 - 484151
Alignment:
Q  218 ttgattttataatatgttaggataatttaggttagaat 255  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  484114 ttgattttatgatatgttaggatagtttaggttagaat 484151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 256
Target Start/End: Original strand, 18438938 - 18438975
Alignment:
Q  219 tgattttataatatgttaggataatttaggttagaatt 256  Q
    ||||||||| ||||||||||||| ||||||||||||||    
T  18438938 tgattttatgatatgttaggatagtttaggttagaatt 18438975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 256
Target Start/End: Complemental strand, 24862920 - 24862883
Alignment:
Q  219 tgattttataatatgttaggataatttaggttagaatt 256  Q
    ||||||||| ||||||||||||| ||||||||||||||    
T  24862920 tgattttatgatatgttaggatagtttaggttagaatt 24862883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 255
Target Start/End: Complemental strand, 26455449 - 26455412
Alignment:
Q  218 ttgattttataatatgttaggataatttaggttagaat 255  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  26455449 ttgattttatgatatgttaggatagtttaggttagaat 26455412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 256
Target Start/End: Complemental strand, 28168366 - 28168329
Alignment:
Q  219 tgattttataatatgttaggataatttaggttagaatt 256  Q
    ||||||||| ||||||||||||| ||||||||||||||    
T  28168366 tgattttatgatatgttaggatagtttaggttagaatt 28168329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 255
Target Start/End: Original strand, 41016712 - 41016749
Alignment:
Q  218 ttgattttataatatgttaggataatttaggttagaat 255  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  41016712 ttgattttatgatatgttaggatagtttaggttagaat 41016749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 255
Target Start/End: Complemental strand, 41276659 - 41276622
Alignment:
Q  218 ttgattttataatatgttaggataatttaggttagaat 255  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  41276659 ttgattttatgatatgttaggatagtttaggttagaat 41276622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 255
Target Start/End: Complemental strand, 45066136 - 45066099
Alignment:
Q  218 ttgattttataatatgttaggataatttaggttagaat 255  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  45066136 ttgattttatgatatgttaggatagtttaggttagaat 45066099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 147
Target Start/End: Original strand, 31170581 - 31170629
Alignment:
Q  99 aagtcatttcaagccaatttcaatcacaaaaataagtaagttttttgaa 147  Q
    |||||||| |||||||||||||| |||||||  |||||||| |||||||    
T  31170581 aagtcattccaagccaatttcaagcacaaaatcaagtaagtgttttgaa 31170629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 227
Target Start/End: Complemental strand, 40703951 - 40703923
Alignment:
Q  199 ttcgattatataggttttattgattttat 227  Q
    |||||||||||||||||||||||||||||    
T  40703951 ttcgattatataggttttattgattttat 40703923  T

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Target: scaffold0176 (Bit Score: 85; Significance: 1e-40; HSPs: 4)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 13 - 165
Target Start/End: Complemental strand, 3577 - 3425
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||||||| || |||||||||||||||||||||||||||||| |||||||  || |||| | ||||| |||||||||||| ||| |||| |||||    
T  3577 tgttataagaatataacagacataggagtttccaaaactccattgttgcgttttttattctccttgctgcgattttgagcaatttaaagccattccaagc 3478  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgtt 165  Q
    |||||||||||||||||| ||||||||||| ||||  ||||||||||| ||||    
T  3477 caatttcaatcacaaaaacaagtaagttttctgaatcctattgcattgttgtt 3425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 33 - 135
Target Start/End: Complemental strand, 627 - 525
Alignment:
Q  33 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 132  Q
    ||||||||||||||||||||||||||| |||||||  || ||| |||||||| ||||||  |||| |||||||| ||||||||||||||||||||||| |    
T  627 cataggagtttccaaaactccattgttgcgttttttattatccaaggtgcgattttgagtcatttgaagtcattccaagccaatttcaatcacaaaaaca 528  T
Q  133 agt 135  Q
    |||    
T  527 agt 525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 196 - 256
Target Start/End: Complemental strand, 3389 - 3324
Alignment:
Q  196 aatttcgattatataggttt-----tattgattttataatatgttaggataatttaggttagaatt 256  Q
    |||||||||||||||||||      |||||||||||| ||||||||||||||||||||||||||||    
T  3389 aatttcgattatataggttcgattatattgattttatgatatgttaggataatttaggttagaatt 3324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 256
Target Start/End: Complemental strand, 432 - 394
Alignment:
Q  218 ttgattttataatatgttaggataatttaggttagaatt 256  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  432 ttgattttatgatatgttaggatagtttaggttagaatt 394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 13 - 172
Target Start/End: Original strand, 10758 - 10916
Alignment:
Q  13 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 112  Q
    ||||||||||| | ||||| ||||||||||||||||||| ||||||| |||||||  || ||| |||||||| ||||||  |||| || |||||| ||||    
T  10758 tgttataagaacataatag-cataggagtttccaaaacttcattgttgcgttttttattatccaaggtgcgattttgagtcatttgaattcattttaagc 10856  T
Q  113 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    |||||||||||||||||| ||||||||||||||||   |||||||||| || ||||||||    
T  10857 caatttcaatcacaaaaacaagtaagttttttgaatcatattgcattgttgctttgtggt 10916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 9 - 170
Target Start/End: Complemental strand, 2165 - 2004
Alignment:
Q  9 gatctgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttc 108  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||||||| | ||||| | || |  |||||||||||| |  ||    ||| |||| |    
T  2165 gatctgttataagaacagaacagacataggagtttccaaaactccattgttgcattttttgcttccaaaggtgcgaatttcacaaagcataagccattcc 2066  T
Q  109 aagccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtg 170  Q
    ||| ||||||||| |||||||| ||||||||||| |||| ||||||| |||| |||||||||    
T  2065 aagtcaatttcaagcacaaaaacaagtaagttttgtgaattctattgtattgatgttttgtg 2004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 33 - 172
Target Start/End: Complemental strand, 178 - 39
Alignment:
Q  33 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 132  Q
    ||||||||||||||||||||||||||| |||||||  || ||| |||||||| ||||||  |||| ||| |||| |||| |||||| ||||||||||| |    
T  178 cataggagtttccaaaactccattgttgcgtttttaattatccaaggtgcgattttgagtcatttgaagccattacaagtcaattttaatcacaaaaaca 79  T
Q  133 agtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    |||||||||||||||  |||||| |||  || ||||||||    
T  78 agtaagttttttgaatcctattgtattattgctttgtggt 39  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 33 - 172
Target Start/End: Original strand, 84679 - 84818
Alignment:
Q  33 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 132  Q
    |||| |||||||||||||||||||||| | |||||  |||| | |||||||| ||||||  |||| ||| ||||  |||||||||| ||||||||||| |    
T  84679 catatgagtttccaaaactccattgttgcatttttaatttttcaaggtgcgattttgagtcatttgaagccattagaagccaattttaatcacaaaaaca 84778  T
Q  133 agtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    |||||||||||||||  ||||||||||| || ||||||||    
T  84779 agtaagttttttgaatcctattgcattgttgctttgtggt 84818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 32 - 172
Target Start/End: Original strand, 5429 - 5569
Alignment:
Q  32 acataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaat 131  Q
    |||||||||||||||||||||||||||| |||||||   | ||| || ||| | ||||||  |||| ||| |||| ||||||||||||||||| |||||     
T  5429 acataggagtttccaaaactccattgttgcgttttttagtatccaagttgcaattttgagtcatttgaagccattacaagccaatttcaatcataaaaac 5528  T
Q  132 aagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    ||||||||||||| ||  ||||||||||| || ||||||||    
T  5529 aagtaagtttttttaatcctattgcattgttgctttgtggt 5569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 10303 - 10246
Alignment:
Q  11 tctgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttg 68  Q
    ||||||||||||||| || |||||||||| ||||||||||||||||||| || |||||    
T  10303 tctgttataagaatataacagacataggaatttccaaaactccattgttgcggttttg 10246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 38; Significance: 0.000000000001; HSPs: 3)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 172
Target Start/End: Original strand, 16561 - 16630
Alignment:
Q  103 catttcaagccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 172  Q
    |||| |||| ||||||||| |||||||| |||||| |||||||||  ||||||||||| |||||||||||    
T  16561 cattccaagtcaatttcaagcacaaaaacaagtaaattttttgaatcctattgcattgttgttttgtggt 16630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 16483 - 16527
Alignment:
Q  15 ttataagaatagaatagacataggagtttccaaaactccattgtt 59  Q
    ||||||| | |||| |||||| |||||||||||||||||||||||    
T  16483 ttataagtacagaacagacattggagtttccaaaactccattgtt 16527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 255
Target Start/End: Original strand, 16699 - 16735
Alignment:
Q  219 tgattttataatatgttaggataatttaggttagaat 255  Q
    ||||||||| ||||||||||||| |||||||||||||    
T  16699 tgattttatgatatgttaggatagtttaggttagaat 16735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 84
Target Start/End: Original strand, 3965 - 4035
Alignment:
Q  14 gttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcga 84  Q
    |||||||||| |||| |||||||||||||||||||||| ||||||| || ||||  || || |||||||||    
T  3965 gttataagaacagaacagacataggagtttccaaaacttcattgttgcggttttcattctcttaggtgcga 4035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 154417 - 154368
Alignment:
Q  11 tctgttataagaatagaatag-acataggagtttccaaaactccattgtt 59  Q
    ||||||||||||| |||| || |||||||| |||||||||||||||||||    
T  154417 tctgttataagaacagaacagcacataggaatttccaaaactccattgtt 154368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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