View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14630_low_12 (Length: 299)
Name: NF14630_low_12
Description: NF14630
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14630_low_12 |
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Alignment Details
Target: chr7 (Bit Score: 144; Significance: 1e-75; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 16 - 163
Target Start/End: Original strand, 35219235 - 35219382
Alignment:
| Q |
16 |
atcaaacccccttcattacatttacacgttcagttgttatctttaaaccaaacccgaaaacaacagtaccaagtttttgtcattctttgctagaaactat |
115 |
Q |
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| T |
35219235 |
atcaaacacccttcattacatttacacgttcagttgttatctttaaaccaaacccgaaaacaacagtaccaagtttttgtcattctttgctagaaactat |
35219334 |
T |
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| Q |
116 |
ggactctatcagcacaagtagcaccagttcatcagtgattagtactgt |
163 |
Q |
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| T |
35219335 |
ggactctatcagcacaagtagcaccagttcatcagtgattagtactgt |
35219382 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 236 - 282
Target Start/End: Original strand, 35219455 - 35219501
Alignment:
| Q |
236 |
tatcaaggtagtgtacatatcaaaccctatgaaggttaagactagtg |
282 |
Q |
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| T |
35219455 |
tatcaaggtagtgtacatatcaaaccctatgaaggttaagactagtg |
35219501 |
T |
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