View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14632_high_3 (Length: 383)

Name: NF14632_high_3
Description: NF14632
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14632_high_3
NF14632_high_3
[»] chr2 (5 HSPs)
chr2 (221-329)||(13049252-13049370)
chr2 (335-383)||(7755334-7755383)
chr2 (1-47)||(28360085-28360131)
chr2 (349-383)||(15562217-15562251)
chr2 (349-382)||(13421801-13421834)
[»] chr8 (6 HSPs)
chr8 (140-208)||(33469363-33469435)
chr8 (2-51)||(1349187-1349236)
chr8 (4-51)||(36916134-36916181)
chr8 (1-51)||(27235488-27235538)
chr8 (349-383)||(33763471-33763505)
chr8 (349-383)||(45051349-45051383)
[»] chr5 (11 HSPs)
chr5 (336-383)||(9177956-9178004)
chr5 (9-51)||(40266556-40266598)
chr5 (1-50)||(17344802-17344851)
chr5 (349-383)||(12605666-12605700)
chr5 (4-50)||(16110085-16110131)
chr5 (334-383)||(22097494-22097544)
chr5 (349-383)||(23219393-23219427)
chr5 (10-59)||(7164265-7164314)
chr5 (347-383)||(25879416-25879452)
chr5 (333-372)||(29385416-29385456)
chr5 (351-383)||(42772076-42772108)
[»] chr3 (5 HSPs)
chr3 (336-383)||(11512386-11512434)
chr3 (347-383)||(31342018-31342054)
chr3 (9-50)||(54528906-54528947)
chr3 (336-383)||(22894010-22894058)
chr3 (1-49)||(8150229-8150277)
[»] chr1 (9 HSPs)
chr1 (336-383)||(28739424-28739472)
chr1 (1-51)||(10884457-10884507)
chr1 (349-383)||(50754737-50754771)
chr1 (336-373)||(718981-719019)
chr1 (349-383)||(10449461-10449495)
chr1 (9-50)||(5603130-5603171)
chr1 (335-371)||(44801884-44801921)
chr1 (336-371)||(10449579-10449615)
chr1 (1-53)||(42883720-42883772)
[»] chr7 (6 HSPs)
chr7 (337-383)||(7211860-7211907)
chr7 (337-383)||(17272699-17272746)
chr7 (337-383)||(46282868-46282915)
chr7 (349-383)||(32315720-32315754)
chr7 (349-382)||(29681778-29681811)
chr7 (336-383)||(25099360-25099408)
[»] chr4 (4 HSPs)
chr4 (336-383)||(30023656-30023703)
chr4 (347-383)||(54223564-54223600)
chr4 (349-383)||(53261103-53261137)
chr4 (347-383)||(33380614-33380650)
[»] chr6 (7 HSPs)
chr6 (349-383)||(2543854-2543888)
chr6 (349-383)||(28581745-28581779)
chr6 (349-383)||(369530-369564)
chr6 (349-383)||(16193840-16193874)
chr6 (1-51)||(26498339-26498389)
chr6 (9-50)||(18744727-18744768)
chr6 (336-383)||(11448056-11448104)


Alignment Details
Target: chr2 (Bit Score: 60; Significance: 2e-25; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 221 - 329
Target Start/End: Complemental strand, 13049370 - 13049252
Alignment:
Q  221 gtaataattgtaaaaatgttagccacaatacatgacagta----------catatatataagagggtacctaaggtagtaaaatttaccaagtactgtag 310  Q
    |||||||| |||||||||||||||||||||||||||||||          |||| ||||||||||||||||||||||||||||||| |||||| ||  ||    
T  13049370 gtaataatcgtaaaaatgttagccacaatacatgacagtaactttcagtacataaatataagagggtacctaaggtagtaaaattttccaagtgcttcag 13049271  T
Q  311 caattaatttccatcacat 329  Q
    |||||||||||||||||||    
T  13049270 caattaatttccatcacat 13049252  T

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Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 335 - 383
Target Start/End: Original strand, 7755334 - 7755383
Alignment:
Q  335 cgggtagcacttga-tgacattgtggttggtgacattggccaaccacaat 383  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||    
T  7755334 cgggtagcacttgggtgacattgtggttggtgacattggccaaccacaat 7755383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 28360085 - 28360131
Alignment:
Q  1 ctacgcatgttaactcacactaatgttaaatttgtgtgagttaactc 47  Q
    |||||||||||||||||| ||| ||||||||||| ||||||||||||    
T  28360085 ctacgcatgttaactcacgctagtgttaaatttgcgtgagttaactc 28360131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 349 - 383
Target Start/End: Original strand, 15562217 - 15562251
Alignment:
Q  349 tgacattgtggttggtgacattggccaaccacaat 383  Q
    |||||||||||||| ||||||||||||||||||||    
T  15562217 tgacattgtggttgatgacattggccaaccacaat 15562251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 349 - 382
Target Start/End: Complemental strand, 13421834 - 13421801
Alignment:
Q  349 tgacattgtggttggtgacattggccaaccacaa 382  Q
    ||||||||||||||||||||||| ||||||||||    
T  13421834 tgacattgtggttggtgacattgaccaaccacaa 13421801  T

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Target: chr8 (Bit Score: 44; Significance: 6e-16; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 140 - 208
Target Start/End: Complemental strand, 33469435 - 33469363
Alignment:
Q  140 tccttattcttcctaacttggg----atggtgtagaaaaaatgtcacatcacttaaataagacaaatactgta 208  Q
    ||||||||||||||||||||||    || || |||||||||||||||||||||||||||| ||||||||||||    
T  33469435 tccttattcttcctaacttgggtgggatagtatagaaaaaatgtcacatcacttaaataaaacaaatactgta 33469363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 1349236 - 1349187
Alignment:
Q  2 tacgcatgttaactcacactaatgttaaatttgtgtgagttaactcacgc 51  Q
    ||||||||||||||||||||| ||||||||||| ||||||| ||||||||    
T  1349236 tacgcatgttaactcacactattgttaaatttgcgtgagttgactcacgc 1349187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 36916181 - 36916134
Alignment:
Q  4 cgcatgttaactcacactaatgttaaatttgtgtgagttaactcacgc 51  Q
    |||||||||| ||||| ||||||||| |||| ||||||||||||||||    
T  36916181 cgcatgttaattcacattaatgttaattttgcgtgagttaactcacgc 36916134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 27235538 - 27235488
Alignment:
Q  1 ctacgcatgttaactcacactaatgttaaatttgtgtgagttaactcacgc 51  Q
    |||| |||||||||| || ||||||||||||||| ||||||||| ||||||    
T  27235538 ctacacatgttaacttacgctaatgttaaatttgcgtgagttaaatcacgc 27235488  T

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Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 349 - 383
Target Start/End: Original strand, 33763471 - 33763505
Alignment:
Q  349 tgacattgtggttggtgacattggccaaccacaat 383  Q
    |||||||||||||||||||||||| ||||||||||    
T  33763471 tgacattgtggttggtgacattggtcaaccacaat 33763505  T

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Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 349 - 383
Target Start/End: Complemental strand, 45051383 - 45051349
Alignment:
Q  349 tgacattgtggttggtgacattggccaaccacaat 383  Q
    |||||||||||||||||||||||||| ||||||||    
T  45051383 tgacattgtggttggtgacattggccgaccacaat 45051349  T

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Target: chr5 (Bit Score: 37; Significance: 0.000000000009; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 336 - 383
Target Start/End: Complemental strand, 9178004 - 9177956
Alignment:
Q  336 gggtagcacttg-atgacattgtggttggtgacattggccaaccacaat 383  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  9178004 gggtagcacttggatgacattgtggttggtgatattggccaaccacaat 9177956  T

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Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 40266598 - 40266556
Alignment:
Q  9 gttaactcacactaatgttaaatttgtgtgagttaactcacgc 51  Q
    |||||||||| ||||||||||||||| ||||||||||||||||    
T  40266598 gttaactcacgctaatgttaaatttgcgtgagttaactcacgc 40266556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 17344851 - 17344802
Alignment:
Q  1 ctacgcatgttaactcacactaatgttaaatttgtgtgagttaactcacg 50  Q
    |||||||||||||||||| ||| |||||| |||| |||||||||||||||    
T  17344851 ctacgcatgttaactcacgctagtgttaattttgcgtgagttaactcacg 17344802  T

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Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 349 - 383
Target Start/End: Complemental strand, 12605700 - 12605666
Alignment:
Q  349 tgacattgtggttggtgacattggccaaccacaat 383  Q
    |||||||||||||||||||||||| ||||||||||    
T  12605700 tgacattgtggttggtgacattggtcaaccacaat 12605666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 16110131 - 16110085
Alignment:
Q  4 cgcatgttaactcacactaatgttaaatttgtgtgagttaactcacg 50  Q
    |||||||||||||||||||||||||| | ||  ||||||||||||||    
T  16110131 cgcatgttaactcacactaatgttaattctgcatgagttaactcacg 16110085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 334 - 383
Target Start/End: Complemental strand, 22097544 - 22097494
Alignment:
Q  334 tcgggtagcacttga-tgacattgtggttggtgacattggccaaccacaat 383  Q
    ||||||||||||||| ||||||||| |||||||||||||| |||| |||||    
T  22097544 tcgggtagcacttgaatgacattgtagttggtgacattggtcaactacaat 22097494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 349 - 383
Target Start/End: Complemental strand, 23219427 - 23219393
Alignment:
Q  349 tgacattgtggttggtgacattggccaaccacaat 383  Q
    ||||||||||||||||||| |||||||||||||||    
T  23219427 tgacattgtggttggtgaccttggccaaccacaat 23219393  T

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Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 59
Target Start/End: Original strand, 7164265 - 7164314
Alignment:
Q  10 ttaactcacactaatgttaaatttgtgtgagttaactcacgccgtgtgac 59  Q
    ||||||||| |||||||||||||||  |||||||| |||||||| |||||    
T  7164265 ttaactcacgctaatgttaaatttgcatgagttaattcacgccgcgtgac 7164314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 347 - 383
Target Start/End: Complemental strand, 25879452 - 25879416
Alignment:
Q  347 gatgacattgtggttggtgacattggccaaccacaat 383  Q
    |||||||||||||||||||| ||| ||||||||||||    
T  25879452 gatgacattgtggttggtgatattagccaaccacaat 25879416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 333 - 372
Target Start/End: Complemental strand, 29385456 - 29385416
Alignment:
Q  333 gtcgggtagcacttga-tgacattgtggttggtgacattgg 372  Q
    |||||||||||||||  ||||||||||||||||||||||||    
T  29385456 gtcgggtagcacttgggtgacattgtggttggtgacattgg 29385416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 351 - 383
Target Start/End: Complemental strand, 42772108 - 42772076
Alignment:
Q  351 acattgtggttggtgacattggccaaccacaat 383  Q
    ||||||||||||||||||||| |||||||||||    
T  42772108 acattgtggttggtgacattgaccaaccacaat 42772076  T

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Target: chr3 (Bit Score: 37; Significance: 0.000000000009; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 336 - 383
Target Start/End: Original strand, 11512386 - 11512434
Alignment:
Q  336 gggtagcacttga-tgacattgtggttggtgacattggccaaccacaat 383  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||    
T  11512386 gggtagcacttgggtgacattgtggttggtgacattggccaaccacaat 11512434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 347 - 383
Target Start/End: Original strand, 31342018 - 31342054
Alignment:
Q  347 gatgacattgtggttggtgacattggccaaccacaat 383  Q
    |||||||||||||||||||||||||||||||||||||    
T  31342018 gatgacattgtggttggtgacattggccaaccacaat 31342054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 54528947 - 54528906
Alignment:
Q  9 gttaactcacactaatgttaaatttgtgtgagttaactcacg 50  Q
    ||||| |||||||||||||||||||||| |||||||||||||    
T  54528947 gttaattcacactaatgttaaatttgtgggagttaactcacg 54528906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 336 - 383
Target Start/End: Complemental strand, 22894058 - 22894010
Alignment:
Q  336 gggtagcacttga-tgacattgtggttggtgacattggccaaccacaat 383  Q
    ||||||||||||  ||||||||||||||||||||||| |||||||||||    
T  22894058 gggtagcacttgggtgacattgtggttggtgacattgaccaaccacaat 22894010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 8150229 - 8150277
Alignment:
Q  1 ctacgcatgttaactcacactaatgttaaatttgtgtgagttaactcac 49  Q
    ||||| |||||||||||  |||||||||||| || ||||||||||||||    
T  8150229 ctacgtatgttaactcatgctaatgttaaatatgcgtgagttaactcac 8150277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.000000000009; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 336 - 383
Target Start/End: Complemental strand, 28739472 - 28739424
Alignment:
Q  336 gggtagcacttga-tgacattgtggttggtgacattggccaaccacaat 383  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||    
T  28739472 gggtagcacttgggtgacattgtggttggtgacattggccaaccacaat 28739424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 10884507 - 10884457
Alignment:
Q  1 ctacgcatgttaactcacactaatgttaaatttgtgtgagttaactcacgc 51  Q
    |||| ||||||||||||| ||| ||||||||||| ||||||||||||||||    
T  10884507 ctacacatgttaactcacgctagtgttaaatttgcgtgagttaactcacgc 10884457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 349 - 383
Target Start/End: Original strand, 50754737 - 50754771
Alignment:
Q  349 tgacattgtggttggtgacattggccaaccacaat 383  Q
    |||||||||||||||||||||||||||||||||||    
T  50754737 tgacattgtggttggtgacattggccaaccacaat 50754771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 336 - 373
Target Start/End: Original strand, 718981 - 719019
Alignment:
Q  336 gggtagcacttga-tgacattgtggttggtgacattggc 373  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  718981 gggtagcacttgagtgacattgtggttggtgacattggc 719019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 349 - 383
Target Start/End: Original strand, 10449461 - 10449495
Alignment:
Q  349 tgacattgtggttggtgacattggccaaccacaat 383  Q
    ||||||||||||||||||||||| |||||||||||    
T  10449461 tgacattgtggttggtgacattgaccaaccacaat 10449495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 5603171 - 5603130
Alignment:
Q  9 gttaactcacactaatgttaaatttgtgtgagttaactcacg 50  Q
    |||||||||| ||| ||||||||||| |||||||||||||||    
T  5603171 gttaactcacgctagtgttaaatttgcgtgagttaactcacg 5603130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 371
Target Start/End: Complemental strand, 44801921 - 44801884
Alignment:
Q  335 cgggtagcacttg-atgacattgtggttggtgacattg 371  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  44801921 cgggtagcacttggatgacattgtggttggtgacattg 44801884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 336 - 371
Target Start/End: Complemental strand, 10449615 - 10449579
Alignment:
Q  336 gggtagcacttg-atgacattgtggttggtgacattg 371  Q
    |||||||||||| ||||||||||||||||||||||||    
T  10449615 gggtagcacttggatgacattgtggttggtgacattg 10449579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 42883772 - 42883720
Alignment:
Q  1 ctacgcatgttaactcacactaatgttaaatttgtgtgagttaactcacgccg 53  Q
    |||| ||||||||||||| | | |||||||||||  |||||||||||||||||    
T  42883772 ctacacatgttaactcacgcaagtgttaaatttgcatgagttaactcacgccg 42883720  T

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Target: chr7 (Bit Score: 36; Significance: 0.00000000004; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 337 - 383
Target Start/End: Original strand, 7211860 - 7211907
Alignment:
Q  337 ggtagcacttga-tgacattgtggttggtgacattggccaaccacaat 383  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||    
T  7211860 ggtagcacttgggtgacattgtggttggtgacattggccaaccacaat 7211907  T

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Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 337 - 383
Target Start/End: Original strand, 17272699 - 17272746
Alignment:
Q  337 ggtagcacttga-tgacattgtggttggtgacattggccaaccacaat 383  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||    
T  17272699 ggtagcacttgggtgacattgtggttggtgacattggccaaccacaat 17272746  T

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Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 337 - 383
Target Start/End: Original strand, 46282868 - 46282915
Alignment:
Q  337 ggtagcacttga-tgacattgtggttggtgacattggccaaccacaat 383  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||||    
T  46282868 ggtagcacttgagtgacattgtagttggtgacattggccaaccacaat 46282915  T

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Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 349 - 383
Target Start/End: Original strand, 32315720 - 32315754
Alignment:
Q  349 tgacattgtggttggtgacattggccaaccacaat 383  Q
    |||||||||||||||||||||||||||||||||||    
T  32315720 tgacattgtggttggtgacattggccaaccacaat 32315754  T

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Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 349 - 382
Target Start/End: Original strand, 29681778 - 29681811
Alignment:
Q  349 tgacattgtggttggtgacattggccaaccacaa 382  Q
    ||||||||||||||||||||||||||||||||||    
T  29681778 tgacattgtggttggtgacattggccaaccacaa 29681811  T

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Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 336 - 383
Target Start/End: Complemental strand, 25099408 - 25099360
Alignment:
Q  336 gggtagcacttga-tgacattgtggttggtgacattggccaaccacaat 383  Q
    ||||||||||||| ||| ||||||||||||||| |||| ||||||||||    
T  25099408 gggtagcacttgagtgaaattgtggttggtgactttggtcaaccacaat 25099360  T

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Target: chr4 (Bit Score: 36; Significance: 0.00000000004; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 336 - 383
Target Start/End: Complemental strand, 30023703 - 30023656
Alignment:
Q  336 gggtagcacttgatgacattgtggttggtgacattggccaaccacaat 383  Q
    |||||||||| | ||||||||||||||||||||||| |||||||||||    
T  30023703 gggtagcactgggtgacattgtggttggtgacattgaccaaccacaat 30023656  T

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Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 347 - 383
Target Start/End: Original strand, 54223564 - 54223600
Alignment:
Q  347 gatgacattgtggttggtgacattggccaaccacaat 383  Q
    ||||||||||||||||||||||||| |||||||||||    
T  54223564 gatgacattgtggttggtgacattgaccaaccacaat 54223600  T

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Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 349 - 383
Target Start/End: Original strand, 53261103 - 53261137
Alignment:
Q  349 tgacattgtggttggtgacattggccaaccacaat 383  Q
    ||||||||||||||||||||||| |||||||||||    
T  53261103 tgacattgtggttggtgacattgaccaaccacaat 53261137  T

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Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 347 - 383
Target Start/End: Original strand, 33380614 - 33380650
Alignment:
Q  347 gatgacattgtggttggtgacattggccaaccacaat 383  Q
    |||||||||||||||||||| ||||| ||||||||||    
T  33380614 gatgacattgtggttggtgatattggtcaaccacaat 33380650  T

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Target: chr6 (Bit Score: 35; Significance: 0.0000000001; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 349 - 383
Target Start/End: Complemental strand, 2543888 - 2543854
Alignment:
Q  349 tgacattgtggttggtgacattggccaaccacaat 383  Q
    |||||||||||||||||||||||||||||||||||    
T  2543888 tgacattgtggttggtgacattggccaaccacaat 2543854  T

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Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 349 - 383
Target Start/End: Original strand, 28581745 - 28581779
Alignment:
Q  349 tgacattgtggttggtgacattggccaaccacaat 383  Q
    |||||||||||||||||||||||||||||||||||    
T  28581745 tgacattgtggttggtgacattggccaaccacaat 28581779  T

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Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 349 - 383
Target Start/End: Complemental strand, 369564 - 369530
Alignment:
Q  349 tgacattgtggttggtgacattggccaaccacaat 383  Q
    ||||||||||||||||||||||| |||||||||||    
T  369564 tgacattgtggttggtgacattgaccaaccacaat 369530  T

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Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 349 - 383
Target Start/End: Complemental strand, 16193874 - 16193840
Alignment:
Q  349 tgacattgtggttggtgacattggccaaccacaat 383  Q
    |||||||||||||||||||||||| ||||||||||    
T  16193874 tgacattgtggttggtgacattggtcaaccacaat 16193840  T

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Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 26498389 - 26498339
Alignment:
Q  1 ctacgcatgttaactcacactaatgttaaatttgtgtgagttaactcacgc 51  Q
    ||||||||||||||||||  || |||||||| || ||||||||||||||||    
T  26498389 ctacgcatgttaactcacgttagtgttaaatctgcgtgagttaactcacgc 26498339  T

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Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 18744768 - 18744727
Alignment:
Q  9 gttaactcacactaatgttaaatttgtgtgagttaactcacg 50  Q
    |||||||||||||| ||||||||||| |||| ||||||||||    
T  18744768 gttaactcacactagtgttaaatttgcgtgacttaactcacg 18744727  T

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Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 336 - 383
Target Start/End: Original strand, 11448056 - 11448104
Alignment:
Q  336 gggtagcacttga-tgacattgtggttggtgacattggccaaccacaat 383  Q
    ||||||||||||  |||||||||||||||| | ||||||||||||||||    
T  11448056 gggtagcacttgggtgacattgtggttggtaatattggccaaccacaat 11448104  T

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