View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14632_high_6 (Length: 221)
Name: NF14632_high_6
Description: NF14632
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14632_high_6 |
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Alignment Details
Target: chr4 (Bit Score: 139; Significance: 7e-73; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 15 - 205
Target Start/End: Complemental strand, 8763701 - 8763511
Alignment:
| Q |
15 |
aatatattgaaacgaacaaacaaaatacagaaaatgctatgacttaaatgttacaaagtttctcttcnnnnnnnnnnnntacaaagttaataagaataaa |
114 |
Q |
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| T |
8763701 |
aatatattgaaacgaacaaacaaaatacagaaaatgctatgacttaaatgttacaaagtttctcttcaaaaaacaaaaatacaaagttaataagaataaa |
8763602 |
T |
|
| Q |
115 |
ccagacatcataacaacgacaccaccaaaccagaaaagttgacaatcaaactataagttgagtcgctcataaacatagaagacgatgaatg |
205 |
Q |
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| T |
8763601 |
ccagacatcataacatcgacaccaccaaaccagaaaagttgacaatcaaactataagtagagtcgttcataaacatataagacgatgaatg |
8763511 |
T |
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