View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14633_high_6 (Length: 332)
Name: NF14633_high_6
Description: NF14633
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14633_high_6 |
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Alignment Details
Target: chr4 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 50 - 327
Target Start/End: Original strand, 46520855 - 46521132
Alignment:
| Q |
50 |
attcacttaacattgaaacctgtcttcaagtttcgatttatatttcccaaaagataaaagctctcaccgagttttcattagcatttgtcatcttaattaa |
149 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46520855 |
attcacttaacattgaaacctgtcttcaagtttcgatttatatttcccaaaagataaaagctctcaccgagttttcattagcatttgtcatcttaattaa |
46520954 |
T |
|
| Q |
150 |
ctcattcatcttttgaagctcctttctcttaaaggctagtaaagcacttgtctttcacatacgttttatcaaatcgcagaaagcaaagcacctacactgt |
249 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
46520955 |
ctcattcatcttttgaagctcctttctcttaaaggctagtaaagcacttgtctttcacatacgttttatcaaatcgcagaaagcaaagcacctacattgt |
46521054 |
T |
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| Q |
250 |
tgtgtccccaaaatctatgtacatttgattgtgttcttgttcttgacatgcctttacatttttcctctaaccctttgc |
327 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46521055 |
tgtgtccccaaaatctatgtacatttgattgtgttcttgttcttgacatgcctttacatttttcctctaaccctttgc |
46521132 |
T |
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