View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14635_high_16 (Length: 302)
Name: NF14635_high_16
Description: NF14635
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14635_high_16 |
 | |
|
| [»] chr2 (1 HSPs) |
| |
|
| [»] scaffold0083 (1 HSPs) |
| | |
|
| [»] chr6 (1 HSPs) |
| |
|
| [»] scaffold0002 (3 HSPs) |
| | |
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Alignment Details
Target: chr3 (Bit Score: 200; Significance: 1e-109; HSPs: 33)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 288
Target Start/End: Complemental strand, 10528006 - 10527719
Alignment:
| Q |
1 |
aacatcttttcaaatgagagggaagatattgatacctcaaatgcaaagcaggaagaatattatcatttggtaagtcccataagttgctgttcaaaattga |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||| |
|
|
| T |
10528006 |
aacatcttttcaaatgagagggaagatattgataactcaaatgcaaagcaggaagaatattatcatttgataagttccatacgttgctgttcaaaattga |
10527907 |
T |
|
| Q |
101 |
agtccactcatttatgtctacagttgaacgtagaagtcctcctagtgttttagcagctattggcagtccgccacactttcttgcaatcttcttgccgatt |
200 |
Q |
| |
|
||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||| ||| |||||||||||||||| |||| ||| |
|
|
| T |
10527906 |
agtccactctgttatgtctacctttgaacgtagaagtcctcctattgttttagcagctattggcaatcctccatactttcttgcaatctttctgcctatt |
10527807 |
T |
|
| Q |
201 |
tcttcaaggattgtgtttttactattgtgaaactcatcacttcccaatgcagtctttgagagtaaagtccaacgatcatcatttgata |
288 |
Q |
| |
|
||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||| |||||||||| |
|
|
| T |
10527806 |
tcttcaagggttgtgtttgtactattgtgaaactcatcacttcccaatgcatgctttgagagtaaagaccaacaatcttcatttgata |
10527719 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 3 - 302
Target Start/End: Complemental strand, 9839507 - 9839208
Alignment:
| Q |
3 |
catcttttcaaatgagagggaagatattgatacctcaaatgcaaagcaggaagaatattatcatttggtaagtcccataagttgctgttcaaaattgaag |
102 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||| ||||| || ||||||||||||||||| |
|
|
| T |
9839507 |
catcttttcaaatgagagggaagatattgataactcaaatgcaatgcaggaagaatattatcatttgataagttccatatgtcgctgttcaaaattgaag |
9839408 |
T |
|
| Q |
103 |
tccactcatttatgtctacagttgaacgtagaagtcctcctagtgttttagcagctattggcagtccgccacactttcttgcaatcttcttgccgatttc |
202 |
Q |
| |
|
|||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||| |||| ||||| |
|
|
| T |
9839407 |
tccactcacttatgtctacctttgaacgtagaagtcctcctattgttttagcagctattggcaatcctccacactttcttgcaatcttcctgcctatttc |
9839308 |
T |
|
| Q |
203 |
ttcaaggattgtgtttttactattgtgaaactcatcacttcccaatgcagtctttgagagtaaagtccaacgatcatcatttgatagagggtctaattta |
302 |
Q |
| |
|
||||||| ||||||| ||||| ||||||||||||||||||||||||| |||||||||||||| ||||| ||| |||||||||||| | ||||||||| |
|
|
| T |
9839307 |
ttcaagggctgtgtttgaactatggtgaaactcatcacttcccaatgcatgctttgagagtaaagaccaacaatcttcatttgatagaagatctaattta |
9839208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 3 - 302
Target Start/End: Original strand, 10363221 - 10363520
Alignment:
| Q |
3 |
catcttttcaaatgagagggaagatattgatacctcaaatgcaaagcaggaagaatattatcatttggtaagtcccataagttgctgttcaaaattgaag |
102 |
Q |
| |
|
||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| ||||| |||||||||||||||||||| |
|
|
| T |
10363221 |
catcttttcaagtgagagggaagatattgataactcaaatgcaaagcaggaagaatattatcatttcgcaagttccatatgttgctgttcaaaattgaag |
10363320 |
T |
|
| Q |
103 |
tccactcatttatgtctacagttgaacgtagaagtcctcctagtgttttagcagctattggcagtccgccacactttcttgcaatcttcttgccgatttc |
202 |
Q |
| |
|
||||||| |||||||||| ||||||| |||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||| |||| ||||| |
|
|
| T |
10363321 |
tccactctgttatgtctacctttgaacggagaagtcctcctagtgttttagcagcaattggcaatcctccacactttcttgcaatcttcctgcctatttc |
10363420 |
T |
|
| Q |
203 |
ttcaaggattgtgtttttactattgtgaaactcatcacttcccaatgcagtctttgagagtaaagtccaacgatcatcatttgatagagggtctaattta |
302 |
Q |
| |
|
||||||| |||||||| |||||||||||||||||||| |||||| |||| |||||||||||||||||||| ||| |||||||||||| | ||||||||| |
|
|
| T |
10363421 |
ttcaagggttgtgtttgtactattgtgaaactcatcatttcccagtgcatgctttgagagtaaagtccaacaatcttcatttgatagaagatctaattta |
10363520 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 3 - 302
Target Start/End: Complemental strand, 9850385 - 9850086
Alignment:
| Q |
3 |
catcttttcaaatgagagggaagatattgatacctcaaatgcaaagcaggaagaatattatcatttggtaagtcccataagttgctgttcaaaattgaag |
102 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||| ||||| || |||||||||||||||| |
|
|
| T |
9850385 |
catcttttcaaatgagagggaagatattgataactcaaatgcaatgcaggaagaatattatcatttgataagttccatatgtcactgttcaaaattgaag |
9850286 |
T |
|
| Q |
103 |
tccactcatttatgtctacagttgaacgtagaagtcctcctagtgttttagcagctattggcagtccgccacactttcttgcaatcttcttgccgatttc |
202 |
Q |
| |
|
|||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||| |||| ||||| |
|
|
| T |
9850285 |
tccactcacttatgtctacctttgaacgtagaagtcctcctattgttttagcagctattggcaatcctccacactttcttgcaatcttcctgcctatttc |
9850186 |
T |
|
| Q |
203 |
ttcaaggattgtgtttttactattgtgaaactcatcacttcccaatgcagtctttgagagtaaagtccaacgatcatcatttgatagagggtctaattta |
302 |
Q |
| |
|
||||||| ||||||| ||||| ||||||||||||||||||||||||| |||||||||||||| ||||| ||| |||||||||||| | ||||||||| |
|
|
| T |
9850185 |
ttcaagggctgtgtttgaactatggtgaaactcatcacttcccaatgcatgctttgagagtaaagaccaacaatcttcatttgatagaagatctaattta |
9850086 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 10196321 - 10196020
Alignment:
| Q |
1 |
aacatcttttcaaatgagagggaagatattgatacctcaaatgcaaagcaggaagaatattatcatttggtaagtcccataagttgctgttcaaaattga |
100 |
Q |
| |
|
||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||| || ||||||||||||||| |
|
|
| T |
10196321 |
aacatcttttcaaatgacagggaagatattgataactcaaatgcaaagcaggaagaatattatcatttgataagttccatatgtcgctgttcaaaattga |
10196222 |
T |
|
| Q |
101 |
agtccactcatttatgtctacagttgaacgtagaagtcctcctagtgttttagcagctattggcagtccgccacactttcttgcaatcttcttgccgatt |
200 |
Q |
| |
|
||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||| ||| ||| |
|
|
| T |
10196221 |
agtccactctgttatttctacctttgaacgtagaagtcctcctagtgttttagcagctattggcaatcctccacacttccttgcaatcttcaggccaatt |
10196122 |
T |
|
| Q |
201 |
tcttcaaggattgtgtttttactattgtgaaactcatcacttcccaatgcagtctttgagagtaaagtccaacgatcatcatttgatagagggtctaatt |
300 |
Q |
| |
|
|||||||| |||||||| |||||| | |||||| |||| | ||||||||| |||||||||||||||||||| ||| |||||||| ||| | ||||||| |
|
|
| T |
10196121 |
gcttcaagggttgtgtttgtactatggggaaacttatcattgcccaatgcatgctttgagagtaaagtccaacaatcttcatttgacagaagttctaatt |
10196022 |
T |
|
| Q |
301 |
ta |
302 |
Q |
| |
|
|| |
|
|
| T |
10196021 |
ta |
10196020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 10089438 - 10089137
Alignment:
| Q |
1 |
aacatcttttcaaatgagagggaagatattgatacctcaaatgcaaagcaggaagaatattatcatttggtaagtcccataagttgctgttcaaaattga |
100 |
Q |
| |
|
||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||| || ||||||||||||||| |
|
|
| T |
10089438 |
aacatcttttcaaatgacagggaagatattgataactcaaatgcaaagcaggaagaatattatcatttgataagttccatatgtcgctgttcaaaattga |
10089339 |
T |
|
| Q |
101 |
agtccactcatttatgtctacagttgaacgtagaagtcctcctagtgttttagcagctattggcagtccgccacactttcttgcaatcttcttgccgatt |
200 |
Q |
| |
|
||||||||| |||| ||||| |||||||||||||||||||||||||||| ||||||||||||| ||| |||||||| |||||||||||| ||| ||| |
|
|
| T |
10089338 |
agtccactctgttatttctacctttgaacgtagaagtcctcctagtgttttggcagctattggcaatcctccacacttccttgcaatcttccggccaatt |
10089239 |
T |
|
| Q |
201 |
tcttcaaggattgtgtttttactattgtgaaactcatcacttcccaatgcagtctttgagagtaaagtccaacgatcatcatttgatagagggtctaatt |
300 |
Q |
| |
|
|||||||| |||||||| |||||| | |||||| |||| | ||||||||| |||||||||||||||||||| ||| |||||||| ||| | ||||||| |
|
|
| T |
10089238 |
gcttcaagggttgtgtttgtactatggggaaacttatcattgcccaatgcatgctttgagagtaaagtccaacaatcttcatttgacagaagttctaatt |
10089139 |
T |
|
| Q |
301 |
ta |
302 |
Q |
| |
|
|| |
|
|
| T |
10089138 |
ta |
10089137 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 10664174 - 10663873
Alignment:
| Q |
1 |
aacatcttttcaaatgagagggaagatattgatacctcaaatgcaaagcaggaagaatattatcatttggtaagtcccataagttgctgttcaaaattga |
100 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| | |||| ||||| |||||||||||||||||| |
|
|
| T |
10664174 |
aacatctcttcaaatgagagggaagatattgataactcaaatgcaatgcaggaagaatattatcattgcgcaagttccatatgttgctgttcaaaattga |
10664075 |
T |
|
| Q |
101 |
agtccactcatttatgtctacagttgaacgtagaagtcctcctagtgttttagcagctattggcagtccgccacactttcttgcaatcttcttgccgatt |
200 |
Q |
| |
|
||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||| |||| || |
|
|
| T |
10664074 |
agtccactctgttatgtctacctttgaacgtagaagtcctcctaatgttttagcagctattggcaatcctccacactttcttgcaatcttcctgcctgtt |
10663975 |
T |
|
| Q |
201 |
tcttcaaggattgtgtttttactattgtgaaactcatcacttcccaatgcagtctttgagagtaaagtccaacgatcatcatttgatagagggtctaatt |
300 |
Q |
| |
|
||||||||| |||||||| ||||| ||||||||| || |||||||||||| |||||| ||||| | ||||| ||| |||||||||||| | ||||||| |
|
|
| T |
10663974 |
tcttcaagggttgtgtttgaactatggtgaaactcgtcgcttcccaatgcatgctttgaaagtaaggaccaacaatcttcatttgatagaagttctaatt |
10663875 |
T |
|
| Q |
301 |
ta |
302 |
Q |
| |
|
|| |
|
|
| T |
10663874 |
ta |
10663873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 1 - 289
Target Start/End: Complemental strand, 10127576 - 10127288
Alignment:
| Q |
1 |
aacatcttttcaaatgagagggaagatattgatacctcaaatgcaaagcaggaagaatattatcatttggtaagtcccataagttgctgttcaaaattga |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| | |||| ||||| |||| ||||||||||||| |
|
|
| T |
10127576 |
aacatcttttcaaatgagagggaagatattgataactcaaatgcaatgcaggaagaatattatcatttcgcaagttccatatgttgttgttcaaaattga |
10127477 |
T |
|
| Q |
101 |
agtccactcatttatgtctacagttgaacgtagaagtcctcctagtgttttagcagctattggcagtccgccacactttcttgcaatcttcttgccgatt |
200 |
Q |
| |
|
||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||| || |
|
|
| T |
10127476 |
agtccactctgttatgtctacctttgaacgtagaagtcctcctagtgttttagcagctattggcaatcctccacactttcttgcaatcttcctgcctgtt |
10127377 |
T |
|
| Q |
201 |
tcttcaaggattgtgtttttactattgtgaaactcatcacttcccaatgcagtctttgagagtaaagtccaacgatcatcatttgatag |
289 |
Q |
| |
|
||||||||| ||| ||| || ||| |||| ||||||||||||||||||| |||||| ||||||| ||||| ||| |||| |||||| |
|
|
| T |
10127376 |
tcttcaagggctgtatttgtattatgctgaatctcatcacttcccaatgcatgctttgatagtaaagaccaacaatcttcatctgatag |
10127288 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 3 - 302
Target Start/End: Original strand, 10433467 - 10433766
Alignment:
| Q |
3 |
catcttttcaaatgagagggaagatattgatacctcaaatgcaaagcaggaagaatattatcatttggtaagtcccataagttgctgttcaaaattgaag |
102 |
Q |
| |
|
|||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||| ||||| |||||||||||||||||||| |
|
|
| T |
10433467 |
catcttttcaaacgagagggaagatattgataactcaaatgcaatgcaggaagaatattatcatttgataagttccatacgttgctgttcaaaattgaag |
10433566 |
T |
|
| Q |
103 |
tccactcatttatgtctacagttgaacgtagaagtcctcctagtgttttagcagctattggcagtccgccacactttcttgcaatcttcttgccgatttc |
202 |
Q |
| |
|
||||||| |||| ||||| ||||||||| ||||||||||| |||||||||||| ||||||| ||| ||||||||||||||||||| | |||| ||||| |
|
|
| T |
10433567 |
tccactctgttatatctacctttgaacgtaaaagtcctcctattgttttagcagcaattggcaatcctccacactttcttgcaatctccctgcctatttc |
10433666 |
T |
|
| Q |
203 |
ttcaaggattgtgtttttactattgtgaaactcatcacttcccaatgcagtctttgagagtaaagtccaacgatcatcatttgatagagggtctaattta |
302 |
Q |
| |
|
||||||| |||||||| || | ||||||||||||||| ||||||||| ||| |||||||||| ||||| ||| |||||||||||| | ||||||||| |
|
|
| T |
10433667 |
ttcaagggttgtgtttgtattgaggtgaaactcatcactgcccaatgcatgcttcgagagtaaagaccaacaatcttcatttgatagaagttctaattta |
10433766 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 290
Target Start/End: Complemental strand, 10261346 - 10261057
Alignment:
| Q |
1 |
aacatcttttcaaatgagagggaagatattgatacctcaaatgcaaagcaggaagaatattatcatttggtaagtcccataagttgctgttcaaaattga |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||| || ||||||||||||||| |
|
|
| T |
10261346 |
aacatcttttcaaatgagagggaagatattgataactcaaatgcaaagcaggaagaatattatcatttgataagttccatatgtcgctgttcaaaattga |
10261247 |
T |
|
| Q |
101 |
agtccactcatttatgtctacagttgaacgtagaagtcctcctagtgttttagcagctattggcagtccgccacactttcttgcaatcttcttgccgatt |
200 |
Q |
| |
|
||||||||| |||||||||| ||||||||||||||||||| |||||||| ||||||||||||| ||| ||||||||||||||||||||| |||| || |
|
|
| T |
10261246 |
agtccactctgttatgtctacctttgaacgtagaagtcctccaagtgttttggcagctattggcaatcctccacactttcttgcaatcttcctgcctgtt |
10261147 |
T |
|
| Q |
201 |
tcttcaaggattgtgtttttactattgtgaaactcatcacttcccaatgcagtctttgagagtaaagtccaacgatcatcatttgataga |
290 |
Q |
| |
|
||||||||| ||| ||| || ||| |||| ||||||||| ||||||||| |||||||||||||| ||||| || ||||| |||||| |
|
|
| T |
10261146 |
tcttcaagggctgtatttgtattatgctgaatctcatcactgcccaatgcatgctttgagagtaaagaccaacagtcttcattcgataga |
10261057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 290
Target Start/End: Original strand, 10375266 - 10375555
Alignment:
| Q |
1 |
aacatcttttcaaatgagagggaagatattgatacctcaaatgcaaagcaggaagaatattatcatttggtaagtcccataagttgctgttcaaaattga |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | |||||| ||||||| ||||| |||||||||||||| || |
|
|
| T |
10375266 |
aacatcttttcaaatgagagggaagatattgataactcaaatgcaaagcaggaagaatgtaatcattaggtaagttccatacattgctgttcaaaatgga |
10375365 |
T |
|
| Q |
101 |
agtccactcatttatgtctacagttgaacgtagaagtcctcctagtgttttagcagctattggcagtccgccacactttcttgcaatcttcttgccgatt |
200 |
Q |
| |
|
|||||||| ||| ||||| ||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||| |||| ||| |
|
|
| T |
10375366 |
tgtccactctgttacatctacctttgaacgtagaagtcctcctattgttttagcagctattggcaatcctccacactttcttgcaatcttcctgcctatt |
10375465 |
T |
|
| Q |
201 |
tcttcaaggattgtgtttttactattgtgaaactcatcacttcccaatgcagtctttgagagtaaagtccaacgatcatcatttgataga |
290 |
Q |
| |
|
||||||||| |||||||| ||||| ||||||||||||||| ||||||||| |||||||||||||| ||||| || ||||| |||||| |
|
|
| T |
10375466 |
tcttcaagggttgtgtttgaactatggtgaaactcatcactacccaatgcatgctttgagagtaaagaccaacagtcttcattcgataga |
10375555 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 1 - 290
Target Start/End: Complemental strand, 10032651 - 10032362
Alignment:
| Q |
1 |
aacatcttttcaaatgagagggaagatattgatacctcaaatgcaaagcaggaagaatattatcatttggtaagtcccataagttgctgttcaaaattga |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||| ||||| || ||||||||||||||| |
|
|
| T |
10032651 |
aacatcttttcaaatgagagggaagatattgataactcaaatgcaatgcaggaagaatattatcatttgataagttccatatgtcgctgttcaaaattga |
10032552 |
T |
|
| Q |
101 |
agtccactcatttatgtctacagttgaacgtagaagtcctcctagtgttttagcagctattggcagtccgccacactttcttgcaatcttcttgccgatt |
200 |
Q |
| |
|
||||||||| |||||||||| ||||||||||||| ||||| |||||||| ||||||||||||| ||| ||||||||||||||||||||| |||| || |
|
|
| T |
10032551 |
agtccactctgttatgtctacctttgaacgtagaagccctccaagtgttttggcagctattggcaatcctccacactttcttgcaatcttcctgcctgtt |
10032452 |
T |
|
| Q |
201 |
tcttcaaggattgtgtttttactattgtgaaactcatcacttcccaatgcagtctttgagagtaaagtccaacgatcatcatttgataga |
290 |
Q |
| |
|
||||||||| ||| ||| | ||| |||| ||||||||| ||||||||| |||||||||||||| ||||| ||| |||||||||||| |
|
|
| T |
10032451 |
tcttcaagggctgtatttgcattatgctgaatctcatcactgcccaatgcatgctttgagagtaaagaccaacaatcttcatttgataga |
10032362 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 1 - 290
Target Start/End: Complemental strand, 11769882 - 11769593
Alignment:
| Q |
1 |
aacatcttttcaaatgagagggaagatattgatacctcaaatgcaaagcaggaagaatattatcatttggtaagtcccataagttgctgttcaaaattga |
100 |
Q |
| |
|
||||||||||||| ||||| |||||||||||||| || ||||||||||||||||||||||||||||||| ||||| ||||| || |||| ||||||| |
|
|
| T |
11769882 |
aacatcttttcaagtgagatggaagatattgataacttaaatgcaaagcaggaagaatattatcatttgataagttccatatgtcattgtttaaaattgc |
11769783 |
T |
|
| Q |
101 |
agtccactcatttatgtctacagttgaacgtagaagtcctcctagtgttttagcagctattggcagtccgccacactttcttgcaatcttcttgccgatt |
200 |
Q |
| |
|
||||||||| |||| ||||| ||||||||||||| ||||||| |||| |||| || ||||||| ||| ||||||||||||||||||||| | || ||| |
|
|
| T |
11769782 |
agtccactctgttatatctacctttgaacgtagaagccctcctattgttatagcggcaattggcaatcctccacactttcttgcaatcttccttcctatt |
11769683 |
T |
|
| Q |
201 |
tcttcaaggattgtgtttttactattgtgaaactcatcacttcccaatgcagtctttgagagtaaagtccaacgatcatcatttgataga |
290 |
Q |
| |
|
||||||||| |||||||| |||||| ||||||||||||||||||||||||| |||||||||||||| ||||| ||| |||||||||||| |
|
|
| T |
11769682 |
tcttcaagggttgtgtttgtactatggtgaaactcatcacttcccaatgcatgctttgagagtaaagaccaacaatcttcatttgataga |
11769593 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 3 - 298
Target Start/End: Complemental strand, 10581256 - 10580952
Alignment:
| Q |
3 |
catcttttcaaatgagagggaagatattgatacctcaaatgcaaagcaggaagaatattatcatttggtaagtcccataagttgctgttcaaaattgaa- |
101 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| | |||| ||||| | ||||||||||||||||| |
|
|
| T |
10581256 |
catcttttcaaatgagagggaagatattgataactcaaatgcaatgcaggaagaatattatcatttcgcaagttccatatgctgctgttcaaaattgaaa |
10581157 |
T |
|
| Q |
102 |
--------gtccactcatttatgtctacagttgaacgtagaagtcctcctagtgttttagcagctattggcagtccgccacactttcttgcaatcttctt |
193 |
Q |
| |
|
||||||| |||||||||| ||||| | |||||||||||||||||||||||||||||||||| ||| |||||| |||||||||||||| | |
|
|
| T |
10581156 |
aaattgaagtccactttgttatgtctacctttgaagggagaagtcctcctagtgttttagcagctattggcaatcccccacaccttcttgcaatcttcct |
10581057 |
T |
|
| Q |
194 |
gccgatttcttcaaggattgtgtttttactattgtgaaactcatcacttcccaatgcagtctttgagagtaaagtccaacgatcatcatttgatagaggg |
293 |
Q |
| |
|
||| |||||||||||| ||| ||| |||||| ||||||||||||||||||||||||| ||||||||||||| ||||| ||| |||||||||||||| |
|
|
| T |
10581056 |
gccaatttcttcaagggctgtatttgtactatggtgaaactcatcacttcccaatgcatagtttgagagtaaagaccaacaatcttcatttgatagaggt |
10580957 |
T |
|
| Q |
294 |
tctaa |
298 |
Q |
| |
|
||||| |
|
|
| T |
10580956 |
tctaa |
10580952 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 10672330 - 10672127
Alignment:
| Q |
1 |
aacatcttttcaaatgagagggaagatattgatacctcaaatgcaaagcaggaagaatattatcatttggtaagtcccataagttgctgttcaaaattga |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| |||| |||||||||||||||||| |
|
|
| T |
10672330 |
aacatcttttcaaatgagagggaagatattgataactcaaatgcaaagcaggaagaatattatcatttcgcaagtttcatatgttgctgttcaaaattga |
10672231 |
T |
|
| Q |
101 |
agtccactcatttatgtctacagttgaacgtagaagtcctcctagtgttttagcagctattggcagtccgccacactttcttgcaatcttcttgccgatt |
200 |
Q |
| |
|
|||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||| |||| ||| |
|
|
| T |
10672230 |
agtccactcagttatgtctacctttgaacgtagaagtcctcctattgttttagcagctattggcaatcctccacactttcttgcaatcttcctgcctatt |
10672131 |
T |
|
| Q |
201 |
tctt |
204 |
Q |
| |
|
|||| |
|
|
| T |
10672130 |
tctt |
10672127 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 1 - 299
Target Start/End: Complemental strand, 10077917 - 10077619
Alignment:
| Q |
1 |
aacatcttttcaaatgagagggaagatattgatacctcaaatgcaaagcaggaagaatattatcatttggtaagtcccataagttgctgttcaaaattga |
100 |
Q |
| |
|
||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||| ||||| || || |||||||||| |
|
|
| T |
10077917 |
aacatattttcaaatgagagggaagacattgataactcaaatgcaaagcaggaagaattttatcatttggtaagttccatacattactattcaaaattgt |
10077818 |
T |
|
| Q |
101 |
agtccactcatttatgtctacagttgaacgtagaagtcctcctagtgttttagcagctattggcagtccgccacactttcttgcaatcttcttgccgatt |
200 |
Q |
| |
|
|||||||| |||| ||||| |||||| |||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||| |||| ||| |
|
|
| T |
10077817 |
tgtccactctattatatctacctttgaacctagaagtcctcctattgttttagcagctattggcaatcctccacactttcttgcaatcttcctgcctatt |
10077718 |
T |
|
| Q |
201 |
tcttcaaggattgtgtttttactattgtgaaactcatcacttcccaatgcagtctttgagagtaaagtccaacgatcatcatttgatagagggtctaat |
299 |
Q |
| |
|
||||||||| ||| |||| |||||| |||||||||| || || ||||||| |||||| |||||| ||||| ||| |||||||||| ||| |||||| |
|
|
| T |
10077717 |
tcttcaagggttgagtttgtactatggtgaaactcaccaactctcaatgcatgctttgaaagtaaataccaacaatcttcatttgataaaggttctaat |
10077619 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 290
Target Start/End: Complemental strand, 10184890 - 10184601
Alignment:
| Q |
1 |
aacatcttttcaaatgagagggaagatattgatacctcaaatgcaaagcaggaagaatattatcatttggtaagtcccataagttgctgttcaaaattga |
100 |
Q |
| |
|
||||| |||||||||||||||||||| ||||||| ||||||||||||| ||||||||| |||||||||||||||| ||||| ||||| |||||||||| |
|
|
| T |
10184890 |
aacatattttcaaatgagagggaagacattgataactcaaatgcaaagtaggaagaattttatcatttggtaagttccatacattgctattcaaaattgt |
10184791 |
T |
|
| Q |
101 |
agtccactcatttatgtctacagttgaacgtagaagtcctcctagtgttttagcagctattggcagtccgccacactttcttgcaatcttcttgccgatt |
200 |
Q |
| |
|
|||||||| |||| ||||| | |||| |||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||| |||| ||| |
|
|
| T |
10184790 |
tgtccactctattatatctaccttcgaacctagaagtcctcctattgttttagcagctattggcaatcctccacactttcttgcaatcttcctgcctatt |
10184691 |
T |
|
| Q |
201 |
tcttcaaggattgtgtttttactattgtgaaactcatcacttcccaatgcagtctttgagagtaaagtccaacgatcatcatttgataga |
290 |
Q |
| |
|
||||||| | ||| |||| || || |||||||||| || || ||||||| |||||||||||| | ||||| ||| |||||||||||| |
|
|
| T |
10184690 |
tcttcaaaggttgagtttctagtacggtgaaactcaccaactctcaatgcatgctttgagagtaacgaccaacaatcttcatttgataga |
10184601 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 10518133 - 10517926
Alignment:
| Q |
1 |
aacatcttttcaaatgagagggaagatattgatacctcaaatgcaaagcaggaagaatattatcatttggtaagtcccataagttgctgttcaaaattga |
100 |
Q |
| |
|
||||||||||||||||||| |||||||||||||| ||||||||||||||||| | ||| ||||||||| |||||| ||||| ||||||||| | |||||| |
|
|
| T |
10518133 |
aacatcttttcaaatgagaaggaagatattgataactcaaatgcaaagcaggcaaaattttatcatttcgtaagttccatatgttgctgtttagaattga |
10518034 |
T |
|
| Q |
101 |
agtccactcatttatgtctacagttgaacgtagaagtcctcctagtgttttagcagctattggcagtccgccacactttcttgcaatcttcttgccgatt |
200 |
Q |
| |
|
|| |||||| ||| |||| ||||||| | ||||||||| |||||||| ||||||||||| | || ||||| ||| | ||||||||| |||| || |
|
|
| T |
10518033 |
agaccactccttttcaactacctttgaacgcataagtcctccaagtgttttggcagctattggtaacccaccacattttttagcaatcttcctgccaatc |
10517934 |
T |
|
| Q |
201 |
tcttcaag |
208 |
Q |
| |
|
|||||||| |
|
|
| T |
10517933 |
tcttcaag |
10517926 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 11781403 - 11781624
Alignment:
| Q |
1 |
aacatcttttcaaatgagagggaagatattgatacctcaaatgcaaagcaggaagaatattatcatttggtaagtcccataagttgctgttcaaaattga |
100 |
Q |
| |
|
||||||||||||||||||| |||||||||||||| ||||||||||||||||| | || ||||||||| |||||| ||||| |||||||| | |||||| |
|
|
| T |
11781403 |
aacatcttttcaaatgagaaggaagatattgataactcaaatgcaaagcaggcaaaactttatcatttcgtaagttccatatattgctgttgagaattga |
11781502 |
T |
|
| Q |
101 |
agtccactcatttatgtctacagttgaacgtagaagtcctcctagtgttttagcagctattggcagtccgccacactttcttgcaatcttcttgccgatt |
200 |
Q |
| |
|
||||||||| ||| |||| ||||||| | ||||||||| ||||| || ||||||||||||| ||| ||||| ||| | ||||||||| |||| || |
|
|
| T |
11781503 |
agtccactccttttcaactacctttgaacgcataagtcctccaagtgtcttggcagctattggcaatccaccacattttttagcaatcttcctgccaatc |
11781602 |
T |
|
| Q |
201 |
tcttcaaggattgtgtttttac |
222 |
Q |
| |
|
||||| ||| ||| || ||||| |
|
|
| T |
11781603 |
tcttctaggtttgggtatttac |
11781624 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 13171679 - 13171490
Alignment:
| Q |
1 |
aacatcttttcaaatgagagggaagatattgatacctcaaatgcaaagcaggaagaatattatcatttggtaagtcccataagttgctgttcaaaattga |
100 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| || | | |||||||||| | |||||||||||||||||||| ||||| || || || | ||||| |
|
|
| T |
13171679 |
aacatcttttcaaatgtgagggaagatattgataacttagacgcaaagcaggtaaaatattatcatttggtaagttccatatgtcactatttagaattgc |
13171580 |
T |
|
| Q |
101 |
agtccactcatttatgtctacagttgaacgtagaagtcctcctagtgttttagcagctattggcagtccgccacactttcttgcaatctt |
190 |
Q |
| |
|
||||||||| ||| ||||| ||||||| | || |||||| |||||||||| |||||| |||| ||| ||||||||| | |||||||| |
|
|
| T |
13171579 |
agtccactcttttgcatctacctttgaacgcaaaattcctccgagtgttttaggagctatgggcaatccaccacactttttggcaatctt |
13171490 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 13344737 - 13344548
Alignment:
| Q |
1 |
aacatcttttcaaatgagagggaagatattgatacctcaaatgcaaagcaggaagaatattatcatttggtaagtcccataagttgctgttcaaaattga |
100 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| || | | | |||||||| | |||||||||||||||||||| ||||| || || || | ||||| |
|
|
| T |
13344737 |
aacatcttttcaaatgtgagggaagatattgataacttagacgtaaagcaggtaaaatattatcatttggtaagttccatatgtcactatttagaattgc |
13344638 |
T |
|
| Q |
101 |
agtccactcatttatgtctacagttgaacgtagaagtcctcctagtgttttagcagctattggcagtccgccacactttcttgcaatctt |
190 |
Q |
| |
|
||||||||| ||| ||||| ||||||| | || |||||| ||||||||||||||||| |||| ||| ||||||||| | |||||||| |
|
|
| T |
13344637 |
agtccactcttttgcatctacctttgaacgcaaaattcctccgagtgttttagcagctatgggcaatccaccacactttttggcaatctt |
13344548 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 13333552 - 13333363
Alignment:
| Q |
1 |
aacatcttttcaaatgagagggaagatattgatacctcaaatgcaaagcaggaagaatattatcatttggtaagtcccataagttgctgttcaaaattga |
100 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| || | | |||||||||| | ||| ||||||||||||||| ||||| || || || | ||||| |
|
|
| T |
13333552 |
aacatcttttcaaatgtgagggaagatattgataacttagacgcaaagcaggtaaaattgtatcatttggtaagttccatatgtcactatttagaattgc |
13333453 |
T |
|
| Q |
101 |
agtccactcatttatgtctacagttgaacgtagaagtcctcctagtgttttagcagctattggcagtccgccacactttcttgcaatctt |
190 |
Q |
| |
|
||||||||| ||| ||||| ||||||| | || |||||| ||||||||||||||||| |||| ||| ||||||||| | |||||||| |
|
|
| T |
13333452 |
agtccactcttttgcatctacctttgaacgcaaaattcctccgagtgttttagcagctatgggcaatccaccacactttttggcaatctt |
13333363 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 13290313 - 13290233
Alignment:
| Q |
1 |
aacatcttttcaaatgagagggaagatattgatacctcaaatgcaaagcaggaagaatattatcatttggtaagtcccata |
81 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| || | | |||||||||| | |||||||||||||||||||| ||||| |
|
|
| T |
13290313 |
aacatcttttcaaatgtgagggaagatattgataacttagacgcaaagcaggtaaaatattatcatttggtaagttccata |
13290233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 3 - 205
Target Start/End: Complemental strand, 10501220 - 10501018
Alignment:
| Q |
3 |
catcttttcaaatgagagggaagatattgatacctcaaatgcaaagcaggaagaatattatcatttggtaagtcccataagttgctgttcaaaattgaag |
102 |
Q |
| |
|
|||||||| ||||||||||||||||||||||| ||||||| ||||| || | ||| |||||||| ||||| ||||| || ||| |||| ||||| || |
|
|
| T |
10501220 |
catctttttaaatgagagggaagatattgataactcaaatacaaagtgggcaaaattgtatcatttcttaagttccatatgtcgctattcagaattgcag |
10501121 |
T |
|
| Q |
103 |
tccactcatttatgtctacagttgaacgtagaagtcctcctagtgttttagcagctattggcagtccgccacactttcttgcaatcttcttgccgatttc |
202 |
Q |
| |
|
||||||| ||| | | ||||||| | |||||||| |||| ||| |||||||| |||| ||| ||||||||||| ||||||||| |||| || || |
|
|
| T |
10501120 |
tccactctttttcaaccgcctttgaacgcaatagtcctccaagtgcttttgcagctatcggcaatccaccacactttctagcaatcttcctgccaatctc |
10501021 |
T |
|
| Q |
203 |
ttc |
205 |
Q |
| |
|
||| |
|
|
| T |
10501020 |
ttc |
10501018 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 13161628 - 13161548
Alignment:
| Q |
1 |
aacatcttttcaaatgagagggaagatattgatacctcaaatgcaaagcaggaagaatattatcatttggtaagtcccata |
81 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| || | | |||||||||| | ||||| |||||||||||||| ||||| |
|
|
| T |
13161628 |
aacatcttttcaaatgtgagggaagatattgataacttagacgcaaagcaggtaaaatatgatcatttggtaagttccata |
13161548 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 8861934 - 8861826
Alignment:
| Q |
1 |
aacatcttttcaaatgagagggaagatattgatacctcaaatgcaaagcaggaagaatattatcatttggtaagtcccataagttgctgttcaaaattga |
100 |
Q |
| |
|
||||||||||||| || ||||||||||||||||| |||| | |||| ||||| | || ||| ||||||||||||| ||||| ||| ||||||||| | |
|
|
| T |
8861934 |
aacatcttttcaattgggagggaagatattgataactcagaagcaatgcaggtaaaacattgtcatttggtaagttccatattttgttgttcaaaacttc |
8861835 |
T |
|
| Q |
101 |
agtccactc |
109 |
Q |
| |
|
||||||||| |
|
|
| T |
8861834 |
agtccactc |
8861826 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 11159438 - 11159546
Alignment:
| Q |
1 |
aacatcttttcaaatgagagggaagatattgatacctcaaatgcaaagcaggaagaatattatcatttggtaagtcccataagttgctgttcaaaattga |
100 |
Q |
| |
|
||||||||||||| || ||||||||||||||||| |||| | |||| ||||| | || ||| ||||||||||||| ||||| ||| ||||||||| | |
|
|
| T |
11159438 |
aacatcttttcaattgggagggaagatattgataactcagaagcaatgcaggtaaaacattgtcatttggtaagttccatattttgttgttcaaaacttc |
11159537 |
T |
|
| Q |
101 |
agtccactc |
109 |
Q |
| |
|
||||||||| |
|
|
| T |
11159538 |
agtccactc |
11159546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 10889954 - 10889859
Alignment:
| Q |
1 |
aacatcttttcaaatgagagggaagatattgatacctcaaatgcaaagcaggaagaatattatcatttggtaagtcccataagttgctgttcaaaa |
96 |
Q |
| |
|
||||||||||||| || ||||||||||||||||| |||| | |||| ||||| | || ||| ||||||||||||| ||||| ||| ||||||||| |
|
|
| T |
10889954 |
aacatcttttcaattgggagggaagatattgataactcagaagcaatgcaggtaaaacattgtcatttggtaagttccatattttgttgttcaaaa |
10889859 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 11148275 - 11148464
Alignment:
| Q |
1 |
aacatcttttcaaatgagagggaagatattgatacctcaaatgcaaagcaggaagaatattatcatttggtaagtcccataagttgctgttcaaaattga |
100 |
Q |
| |
|
||||||||||||| || ||||||||||||||||| |||| | |||| ||||| | | ||| ||||||||||||| ||||| ||| ||||||||| | |
|
|
| T |
11148275 |
aacatcttttcaattgggagggaagatattgataactcagaagcaatgcaggtaacacattgtcatttggtaagttccatattttgttgttcaaaacttc |
11148374 |
T |
|
| Q |
101 |
agtccactcatttatgtctacagttgaacgtagaagtcctcctagtgttttagcagctattggcagtccgccacactttcttgcaatctt |
190 |
Q |
| |
|
||||||||| || ||| ||||||| | | |||||| |||||||| |||||||| |||| || ||||||||||||||||||| |
|
|
| T |
11148375 |
agtccactctttggcatctctttttgaacgcaatactcctccaagtgtttttgcagctatgggcaacccaacacactttcttgcaatctt |
11148464 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 11246042 - 11246115
Alignment:
| Q |
1 |
aacatcttttcaaatgagagggaagatattgatacctcaaatgcaaagcaggaagaatattatcatttggtaag |
74 |
Q |
| |
|
||||||||||||| ||||||| |||||||||||| |||| | |||| ||||| | || ||||||||||||||| |
|
|
| T |
11246042 |
aacatcttttcaattgagaggaaagatattgatagctcagaagcaatgcaggcaatatgttatcatttggtaag |
11246115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 11130447 - 11130527
Alignment:
| Q |
1 |
aacatcttttcaaatgagagggaagatattgatacctcaaatgcaaagcaggaagaatattatcatttggtaagtcccata |
81 |
Q |
| |
|
||||||||||||| || ||||||||||||||||| |||| | |||| ||||| | | ||| ||||||||||||| ||||| |
|
|
| T |
11130447 |
aacatcttttcaattgggagggaagatattgataactcagaagcaatgcaggtaacacattgtcatttggtaagttccata |
11130527 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 302
Target Start/End: Complemental strand, 10500965 - 10500921
Alignment:
| Q |
258 |
gagagtaaagtccaacgatcatcatttgatagagggtctaattta |
302 |
Q |
| |
|
|||||||||||||||| |||||||| |||||||| ||||||||| |
|
|
| T |
10500965 |
gagagtaaagtccaacaatcatcatcagatagaggttctaattta |
10500921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 13396137 - 13396057
Alignment:
| Q |
1 |
aacatcttttcaaatgagagggaagatattgatacctcaaatgcaaagcaggaagaatattatcatttggtaagtcccata |
81 |
Q |
| |
|
|||||||||||||||| || ||||||| |||||| ||| | ||||| ||| | ||||||||||||||||| || ||||| |
|
|
| T |
13396137 |
aacatcttttcaaatgggaaggaagatgttgatatgtcagaaacaaagaaggcataatattatcatttggtatgttccata |
13396057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 174; Significance: 1e-93; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 26907545 - 26907244
Alignment:
| Q |
1 |
aacatcttttcaaatgagagggaagatattgatacctcaaatgcaaagcaggaagaatattatcatttggtaagtcccataagttgctgttcaaaattga |
100 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||| |||||| ||||| || | ||||||||||||| |
|
|
| T |
26907545 |
aacatcttttcaaatgagagggaaggtattgataactcaaatgcaaagctggaagaatattatcatttcgtaagttccatacgtcgttgttcaaaattga |
26907446 |
T |
|
| Q |
101 |
agtccactcatttatgtctacagttgaacgtagaagtcctcctagtgttttagcagctattggcagtccgccacactttcttgcaatcttcttgccgatt |
200 |
Q |
| |
|
||||||||| |||||||||| |||||||||||| ||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||| |||| ||| |
|
|
| T |
26907445 |
agtccactctgttatgtctacctttgaacgtagaattcctcctagtgttttagcagcaattggcaatcctccacactttcttgcaatcttcctgccaatt |
26907346 |
T |
|
| Q |
201 |
tcttcaaggattgtgtttttactattgtgaaactcatcacttcccaatgcagtctttgagagtaaagtccaacgatcatcatttgatagagggtctaatt |
300 |
Q |
| |
|
||||| ||| ||||||| |||||| ||||||||| | ||||||||||||| |||||||||||||| ||||| ||| ||| |||||||||| ||||||| |
|
|
| T |
26907345 |
tcttcgagggttgtgttaatactatggtgaaactctttacttcccaatgcatgctttgagagtaaagaccaacaatcttcagttgatagaggttctaatt |
26907246 |
T |
|
| Q |
301 |
ta |
302 |
Q |
| |
|
|| |
|
|
| T |
26907245 |
ta |
26907244 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0083 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: scaffold0083
Description:
Target: scaffold0083; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 3 - 286
Target Start/End: Original strand, 57834 - 58126
Alignment:
| Q |
3 |
catcttttcaaatgagagggaagatattgatacctcaaatgcaaagcaggaagaatattatcatttggtaagtcccataagttgctgttcaaaa------ |
96 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| ||||| | |||||||||||| |
|
|
| T |
57834 |
catcttttcaaatgagagggaagatattgataactcaaatgcaaagcaggaagaatattatcatttcgcaagttccatatgctgctgttcaaaattgaaa |
57933 |
T |
|
| Q |
97 |
---ttgaagtccactcatttatgtctacagttgaacgtagaagtcctcctagtgttttagcagctattggcagtccgccacactttcttgcaatcttctt |
193 |
Q |
| |
|
|||||||||||| |||||||||| ||||| | |||||||||||||||||||||||||||||||||| ||| |||||| |||||||||||||| | |
|
|
| T |
57934 |
aaattgaagtccactatgttatgtctacctttgaaaggagaagtcctcctagtgttttagcagctattggcaatcccccacaccttcttgcaatcttcct |
58033 |
T |
|
| Q |
194 |
gccgatttcttcaaggattgtgtttttactattgtgaaactcatcacttcccaatgcagtctttgagagtaaagtccaacgatcatcatttga |
286 |
Q |
| |
|
||| |||||||||||| ||| ||| |||||| ||||||||||||||||||||||||| ||||||||||||| ||||| ||| |||||||| |
|
|
| T |
58034 |
gccaatttcttcaagggctgtatttgtactatggtgaaactcatcacttcccaatgcatagtttgagagtaaagaccaacaatcttcatttga |
58126 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 302
Target Start/End: Original strand, 31679154 - 31679455
Alignment:
| Q |
1 |
aacatcttttcaaatgagagggaagatattgatacctcaaatgcaaagcaggaagaatattatcatttggtaagtcccataagttgctgttcaaaattga |
100 |
Q |
| |
|
||||| ||||||||||||| |||||||||||||| |||||| |||| ||||| |||| |||||||||||| || | ||||| || |||| ||||||| |
|
|
| T |
31679154 |
aacatgttttcaaatgagaaggaagatattgataactcaaaagcaaggcagggagaacattatcatttggaaaattccatatgtcattgtttaaaattgc |
31679253 |
T |
|
| Q |
101 |
agtccactcatttatgtctacagttgaacgtagaagtcctcctagtgttttagcagctattggcagtccgccacactttcttgcaatcttcttgccgatt |
200 |
Q |
| |
|
| ||||||| || || || |||| |||||||||||||| |||||||| ||||||||||||| ||||| ||||||| ||||||||||| | || ||| |
|
|
| T |
31679254 |
actccactctttcgcatccacttttgagcgtagaagtcctccaagtgttttggcagctattggcaatccgcaacacttttttgcaatcttcctaccaatt |
31679353 |
T |
|
| Q |
201 |
tcttcaaggattgtgtttttactattgtgaaactcatcacttcccaatgcagtctttgagagtaaagtccaacgatcatcatttgatagagggtctaatt |
300 |
Q |
| |
|
|||| ||| ||| || ||||| || || |||||||| |||||| |||||||||||||| ||| | |||||||| ||||||||| ||||||| |
|
|
| T |
31679354 |
gcttctaggcttgggtatttacggccacaaagttcttcacttccaaatgcatgctttgagagtaaagaccagcaatcatcatctgatagaggttctaatt |
31679453 |
T |
|
| Q |
301 |
ta |
302 |
Q |
| |
|
|| |
|
|
| T |
31679454 |
ta |
31679455 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 44957110 - 44957314
Alignment:
| Q |
1 |
aacatcttttcaaatgagagggaagatattgatacctcaaatgcaaagcaggaagaatattatcatttggtaagtcccataagttgctgttcaaaattga |
100 |
Q |
| |
|
||||||||||||||||||| |||||||||||||| ||||||||||||||||| | ||| |||||||| || ||| ||||| || ||| |||| |||||| |
|
|
| T |
44957110 |
aacatcttttcaaatgagaaggaagatattgataactcaaatgcaaagcaggcaaaattgtatcatttcgttagttccatatgtcgctattcagaattga |
44957209 |
T |
|
| Q |
101 |
agtccactcatttatgtctacagttgaacgtagaagtcctcctagtgttttagcagctattggcagtccgccacactttcttgcaatcttcttgccgatt |
200 |
Q |
| |
|
||||||||| ||| ||| ||||||| | ||||||||| |||||||| ||||||||||||| ||| ||||| ||| | ||||||||| |||| || |
|
|
| T |
44957210 |
agtccactccttttcaactatctttgaacgcataagtcctcccagtgttttggcagctattggcaatccaccacattttttagcaatcttcctgccaatc |
44957309 |
T |
|
| Q |
201 |
tcttc |
205 |
Q |
| |
|
||||| |
|
|
| T |
44957310 |
tcttc |
44957314 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 11485686 - 11485465
Alignment:
| Q |
1 |
aacatcttttcaaatgagagggaagatattgatacctcaaatgcaaagcaggaagaatattatcatttggtaagtcccataagttgctgttcaaaattga |
100 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||| |||||||||||||| || || || |||||||| ||||| ||||| || ||| | || ||||| |
|
|
| T |
11485686 |
aacatctttttaaatgagagggaagatattgataactcaaatgcaaagctggcaggattgtatcattttttaagttccatatgtcgctatgcagaattgt |
11485587 |
T |
|
| Q |
101 |
agtccactcatttatgtctacagttgaacgtagaagtcctcctagtgttttagcagctattggcagtccgccacactttcttgcaatcttcttgccgatt |
200 |
Q |
| |
|
||||||||| ||| |||| ||||| | | |||||||| |||| ||| ||||| ||||||| ||| ||||||||||| ||||||||| |||| || |
|
|
| T |
11485586 |
agtccactccttttcaactacctttgaatgcattagtcctccaagtgcttttgcagcaattggcaatccaccacactttctagcaatcttcctgccaatc |
11485487 |
T |
|
| Q |
201 |
tcttcaaggattgtgtttttac |
222 |
Q |
| |
|
||||| ||| ||| || ||||| |
|
|
| T |
11485486 |
tcttctaggtttgggtatttac |
11485465 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 66; Significance: 3e-29; HSPs: 3)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 135309 - 135498
Alignment:
| Q |
1 |
aacatcttttcaaatgagagggaagatattgatacctcaaatgcaaagcaggaagaatattatcatttggtaagtcccataagttgctgttcaaaattga |
100 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| || | | |||||||||| | |||||||||||||||||||| ||||| || || || | ||||| |
|
|
| T |
135309 |
aacatcttttcaaatgtgagggaagatattgataacttagacgcaaagcaggtaaaatattatcatttggtaagttccatatgtcactatttagaattgc |
135408 |
T |
|
| Q |
101 |
agtccactcatttatgtctacagttgaacgtagaagtcctcctagtgttttagcagctattggcagtccgccacactttcttgcaatctt |
190 |
Q |
| |
|
||||||||| ||| ||||| ||||||| | || |||||| |||||||||| |||||| |||| ||| ||||||||| | |||||||| |
|
|
| T |
135409 |
agtccactcttttgcatctacctttgaacgcaaaattcctccgagtgttttaggagctatgggcaatccaccacactttttggcaatctt |
135498 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 145360 - 145549
Alignment:
| Q |
1 |
aacatcttttcaaatgagagggaagatattgatacctcaaatgcaaagcaggaagaatattatcatttggtaagtcccataagttgctgttcaaaattga |
100 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| || | | |||||||||| | ||| ||||||||||||||| ||||| || || || | ||||| |
|
|
| T |
145360 |
aacatcttttcaaatgtgagggaagatattgataacttagacgcaaagcaggtaaaattgtatcatttggtaagttccatatgtcactatttagaattgc |
145459 |
T |
|
| Q |
101 |
agtccactcatttatgtctacagttgaacgtagaagtcctcctagtgttttagcagctattggcagtccgccacactttcttgcaatctt |
190 |
Q |
| |
|
||||||||| ||| ||||| ||||||| | || |||||| ||||||||||||||||| |||| ||| ||||||||| | |||||||| |
|
|
| T |
145460 |
agtccactcttttgcatctacctttgaacgcaaaattcctccgagtgttttagcagctatgggcaatccaccacactttttggcaatctt |
145549 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 153665 - 153854
Alignment:
| Q |
1 |
aacatcttttcaaatgagagggaagatattgatacctcaaatgcaaagcaggaagaatattatcatttggtaagtcccataagttgctgttcaaaattga |
100 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| || | | |||||||||| | ||| ||||||||||||||| ||||| || || || | ||||| |
|
|
| T |
153665 |
aacatcttttcaaatgtgagggaagatattgataacttagacgcaaagcaggtaaaattgtatcatttggtaagttccatatgtcactatttagaattgc |
153764 |
T |
|
| Q |
101 |
agtccactcatttatgtctacagttgaacgtagaagtcctcctagtgttttagcagctattggcagtccgccacactttcttgcaatctt |
190 |
Q |
| |
|
||||||||| ||| ||||| ||||||| | || |||||| ||||||||||||||||| |||| ||| ||||||||| | |||||||| |
|
|
| T |
153765 |
agtccactcttttgcatctacctttgaacgcaaaattcctccgagtgttttagcagctatgggcaatccaccacactttttggcaatctt |
153854 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 826550 - 826358
Alignment:
| Q |
1 |
aacatcttttcaaatgagagggaagatattgatacctcaaatgcaaagcaggaagaatattatcatttggtaagtcccataagttgctgttcaaaattga |
100 |
Q |
| |
|
||||||||||||||||||||||||| ||| |||| |||||| |||||||||| ||||| |||| |||||||| || ||||| |||||||||||| ||| |
|
|
| T |
826550 |
aacatcttttcaaatgagagggaaggtatagataactcaaaagcaaagcaggcagaatgttattatttggtatgttccatatgttgctgttcaagatttc |
826451 |
T |
|
| Q |
101 |
agtccactcatttatgtctacagttgaacgtagaagtcctcctagtgttttagcagctattggcagtccgccacactttcttgcaatcttctt |
193 |
Q |
| |
|
|||||||| ||| | || |||| | | ||| |||||||| ||||| ||||||||||||| ||| ||||||||| ||||||||||||| |
|
|
| T |
826450 |
ggtccactcctttgcatttaactttgagctcaaaagccctcctagcgttttggcagctattggcaatccaccacacttttttgcaatcttctt |
826358 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 17852344 - 17852456
Alignment:
| Q |
1 |
aacatcttttcaaatgagagggaagatattgatacctcaaatgcaaagcaggaagaatattatcatttggtaagtcccataagttgctgttcaaaattga |
100 |
Q |
| |
|
||||| ||||||||||||| |||||||||||||| |||||||||||||| || ||||| ||||||||| |||| | ||||| | ||| |||| ||||| |
|
|
| T |
17852344 |
aacatattttcaaatgagacggaagatattgataactcaaatgcaaagccgggagaattttatcattttgtaattgccatatatcgctattcagaattgc |
17852443 |
T |
|
| Q |
101 |
agtccactcattt |
113 |
Q |
| |
|
||||||||||||| |
|
|
| T |
17852444 |
agtccactcattt |
17852456 |
T |
|
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Target: chr7 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 29837288 - 29837208
Alignment:
| Q |
1 |
aacatcttttcaaatgagagggaagatattgatacctcaaatgcaaagcaggaagaatattatcatttggtaagtcccata |
81 |
Q |
| |
|
||||||||||||| ||| | ||||||| |||||| ||||||||||| ||||| | | |||||||||| ||||| ||||| |
|
|
| T |
29837288 |
aacatcttttcaagtgacaaggaagatcttgataactcaaatgcaatgcaggcatgactttatcatttgataagttccata |
29837208 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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