View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14635_low_12 (Length: 393)
Name: NF14635_low_12
Description: NF14635
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14635_low_12 |
 | |
|
| [»] scaffold0002 (3 HSPs) |
| | |
|
| [»] scaffold0083 (1 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 206; Significance: 1e-112; HSPs: 30)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 32 - 341
Target Start/End: Complemental strand, 10434021 - 10433712
Alignment:
| Q |
32 |
agtaaccaagtctctgcttgaatctgtcacttctagaacttgggagagcaataatcttgattttcttcgagttgaattaaagaaaagctcgaaggagaaa |
131 |
Q |
| |
|
||||||||||||||| |||||||| |||||||| ||||||||||| ||||||||||||||| | ||||| ||||| |||||||||| ||||| ||||||| |
|
|
| T |
10434021 |
agtaaccaagtctctccttgaatcggtcacttccagaacttgggatagcaataatcttgatgtccttcgtgttgagttaaagaaaaactcgagggagaaa |
10433922 |
T |
|
| Q |
132 |
agatttttgtttgtgctggatgatctgtggaatgacaattataatgattgggatgagctagtaagtcccttcattgatggaaaacctggaagtagggtga |
231 |
Q |
| |
|
||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||| | ||||| |
|
|
| T |
10433921 |
agatttttgtttgtgttggacgatctgtggaatgacaattataatgattggggtgaactagtaagtcccttcattgatggaaaacccggaagcatggtga |
10433822 |
T |
|
| Q |
232 |
ttgtaacaacacgcaaacaaaaagttgcagaggtagcacacacatttcctattcataaattagaacctctatcaaatgatgattgttggtctttactctc |
331 |
Q |
| |
|
|| ||||||| ||| ||||||||||||| ||||| ||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||| |
|
|
| T |
10433821 |
ttataacaacgcgccaacaaaaagttgctgaggtggcacacacatttcctatacataaattagaacttctatcaaatgaagattgttggtctttactctc |
10433722 |
T |
|
| Q |
332 |
aaagcatgca |
341 |
Q |
| |
|
||||||||| |
|
|
| T |
10433721 |
gaagcatgca |
10433712 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 29 - 361
Target Start/End: Original strand, 9849828 - 9850160
Alignment:
| Q |
29 |
gagagtaaccaagtctctgcttgaatctgtcacttctagaacttgggagagcaataatcttgattttcttcgagttgaattaaagaaaagctcgaaggag |
128 |
Q |
| |
|
|||||||||||||||||| |||||||| |||||||| | ||| ||||| ||||||||||||||| | |||||||||| |||||||||| ||| | |||| |
|
|
| T |
9849828 |
gagagtaaccaagtctctccttgaatcggtcacttccataacatgggatagcaataatcttgatgtccttcgagttgcgttaaagaaaaactcaagggag |
9849927 |
T |
|
| Q |
129 |
aaaagatttttgtttgtgctggatgatctgtggaatgacaattataatgattgggatgagctagtaagtcccttcattgatggaaaacctggaagtaggg |
228 |
Q |
| |
|
|||||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||| | || |
|
|
| T |
9849928 |
aaaagatttttgtttgtgttggatgatttgtggaatgacaattataatgattggggtgaactagtaagtcccttcattgatggaaaacccggaagcatgg |
9850027 |
T |
|
| Q |
229 |
tgattgtaacaacacgcaaacaaaaagttgcagaggtagcacacacatttcctattcataaattagaacctctatcaaatgatgattgttggtctttact |
328 |
Q |
| |
|
||||| ||||||||||| ||||||||||||| ||||| |||||||||||||| || ||||||||||| | |||||||||||| ||||||||||||||||| |
|
|
| T |
9850028 |
tgattataacaacacgccaacaaaaagttgctgaggtggcacacacatttccaatacataaattagatcttctatcaaatgaagattgttggtctttact |
9850127 |
T |
|
| Q |
329 |
ctcaaagcatgcaatgtgaagttaggagtttca |
361 |
Q |
| |
|
||||||||||||| || ||||| | |||||||| |
|
|
| T |
9850128 |
ctcaaagcatgcattgggaagtgatgagtttca |
9850160 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 22 - 361
Target Start/End: Original strand, 11769316 - 11769655
Alignment:
| Q |
22 |
atattacgagagtaaccaagtctctgcttgaatctgtcacttctagaacttgggagagcaataatcttgattttcttcgagttgaattaaagaaaagctc |
121 |
Q |
| |
|
|||||| ||||||||||| |||||| |||||||| |||||||| ||||||||||| ||||||||||||||| | ||||||||||| |||||||||| || |
|
|
| T |
11769316 |
atattatgagagtaaccaggtctctccttgaatcggtcacttcaagaacttgggatagcaataatcttgatatccttcgagttgagttaaagaaaaactt |
11769415 |
T |
|
| Q |
122 |
gaaggagaaaagatttttgtttgtgctggatgatctgtggaatgacaattataatgattgggatgagctagtaagtcccttcattgatggaaaacctgga |
221 |
Q |
| |
|
|| |||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||| ||| |||||||||||||||| | |||||||||||||| |
|
|
| T |
11769416 |
gagggagaaaagatttttgtttgtgttagatgatatgtggaatgacaattataatgattggggtgaactagtaagtcccttcagtaatggaaaacctgga |
11769515 |
T |
|
| Q |
222 |
agtagggtgattgtaacaacacgcaaacaaaaagttgcagaggtagcacacacatttcctattcataaattagaacctctatcaaatgatgattgttggt |
321 |
Q |
| |
|
|| | ||||||| ||||||||||| ||| ||||||||| ||||| ||||||||||||||||| ||| ||||| ||| |||||||||||| |||||||||| |
|
|
| T |
11769516 |
agcatggtgattataacaacacgccaacgaaaagttgctgaggtggcacacacatttcctatacatgaattaaaacttctatcaaatgaagattgttggt |
11769615 |
T |
|
| Q |
322 |
ctttactctcaaagcatgcaatgtgaagttaggagtttca |
361 |
Q |
| |
|
|||||||||||||||||||| || ||||| | |||||||| |
|
|
| T |
11769616 |
ctttactctcaaagcatgcattgggaagtgatgagtttca |
11769655 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 29 - 361
Target Start/End: Original strand, 9838950 - 9839282
Alignment:
| Q |
29 |
gagagtaaccaagtctctgcttgaatctgtcacttctagaacttgggagagcaataatcttgattttcttcgagttgaattaaagaaaagctcgaaggag |
128 |
Q |
| |
|
|||||||||||||||||| |||||||| |||||||| | ||| ||||| ||||||||||||||| | |||||||||| |||||||||| ||| | |||| |
|
|
| T |
9838950 |
gagagtaaccaagtctctccttgaatcggtcacttccataacatgggatagcaataatcttgatgtccttcgagttgcgttaaagaaaaactcaagggag |
9839049 |
T |
|
| Q |
129 |
aaaagatttttgtttgtgctggatgatctgtggaatgacaattataatgattgggatgagctagtaagtcccttcattgatggaaaacctggaagtaggg |
228 |
Q |
| |
|
|||||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||| | || |
|
|
| T |
9839050 |
aaaagatttttgtttgtgttggatgatttgtggaatgacaattataatgattggggtgaactagtaagtcccttcattgatggaaaacccggaagcatgg |
9839149 |
T |
|
| Q |
229 |
tgattgtaacaacacgcaaacaaaaagttgcagaggtagcacacacatttcctattcataaattagaacctctatcaaatgatgattgttggtctttact |
328 |
Q |
| |
|
||||| ||||||| ||| ||||||||||||| ||||| |||||||||||||| || ||||||||||| | |||||||||||| ||||||||||||||||| |
|
|
| T |
9839150 |
tgattataacaacgcgccaacaaaaagttgctgaggtggcacacacatttccaatacataaattagatcttctatcaaatgaagattgttggtctttact |
9839249 |
T |
|
| Q |
329 |
ctcaaagcatgcaatgtgaagttaggagtttca |
361 |
Q |
| |
|
||||||||||||| || ||||| | |||||||| |
|
|
| T |
9839250 |
ctcaaagcatgcattgggaagtgatgagtttca |
9839282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 22 - 341
Target Start/End: Original strand, 10663608 - 10663927
Alignment:
| Q |
22 |
atattacgagagtaaccaagtctctgcttgaatctgtcacttctagaacttgggagagcaataatcttgattttcttcgagttgaattaaagaaaagctc |
121 |
Q |
| |
|
|||||| ||||||||| |||||||| ||||||||||||||||| | ||||||||| ||||| |||||||| | ||||||||||| |||||||||| ||| |
|
|
| T |
10663608 |
atattatgagagtaacaaagtctctccttgaatctgtcacttccacaacttgggatagcaaagatcttgatgtccttcgagttgagttaaagaaaatctc |
10663707 |
T |
|
| Q |
122 |
gaaggagaaaagatttttgtttgtgctggatgatctgtggaatgacaattataatgattgggatgagctagtaagtcccttcattgatggaaaacctgga |
221 |
Q |
| |
|
|| |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||| |
|
|
| T |
10663708 |
gagggagaaaagatttttgtttgtgttcgatgatctgtggaatgacaattataatgattggagtgaactagcaagtcccttcattgatggaaaacctgga |
10663807 |
T |
|
| Q |
222 |
agtagggtgattgtaacaacacgcaaacaaaaagttgcagaggtagcacacacatttcctattcataaattagaacctctatcaaatgatgattgttggt |
321 |
Q |
| |
|
|| | ||||||| ||||||| ||| ||||||||||||| ||||| ||||||||||||||||| ||||||||||||| |||||||||||| |||||||||| |
|
|
| T |
10663808 |
agcatggtgattataacaacgcgcgaacaaaaagttgctgaggtggcacacacatttcctatacataaattagaacttctatcaaatgaagattgttggt |
10663907 |
T |
|
| Q |
322 |
ctttactctcaaagcatgca |
341 |
Q |
| |
|
| ||||| |||||||||||| |
|
|
| T |
10663908 |
ccttactttcaaagcatgca |
10663927 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 22 - 341
Target Start/End: Original strand, 10032085 - 10032404
Alignment:
| Q |
22 |
atattacgagagtaaccaagtctctgcttgaatctgtcacttctagaacttgggagagcaataatcttgattttcttcgagttgaattaaagaaaagctc |
121 |
Q |
| |
|
|||||| ||||||||| |||||||| ||||||||||||||||| | ||||| ||| ||||| |||||||| | ||||||||||| |||||||||| ||| |
|
|
| T |
10032085 |
atattatgagagtaacaaagtctctccttgaatctgtcacttccacaacttcggatagcaaagatcttgatgtccttcgagttgagttaaagaaaatctc |
10032184 |
T |
|
| Q |
122 |
gaaggagaaaagatttttgtttgtgctggatgatctgtggaatgacaattataatgattgggatgagctagtaagtcccttcattgatggaaaacctgga |
221 |
Q |
| |
|
|| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
10032185 |
gagggagaaaagatttttgtttgttttggatgatctgtggaatgacaattataatgattggggtgaactagtaagtcccttcattgatggaaaacctgga |
10032284 |
T |
|
| Q |
222 |
agtagggtgattgtaacaacacgcaaacaaaaagttgcagaggtagcacacacatttcctattcataaattagaacctctatcaaatgatgattgttggt |
321 |
Q |
| |
|
|| | ||||||| ||||||||||| ||| ||||||||| ||||| ||| |||||||||||| ||| || || ||| |||||||||||| |||||||||| |
|
|
| T |
10032285 |
agcatggtgattataacaacacgccaacgaaaagttgctgaggtggcatgcacatttcctatacatgaactaaaacttctatcaaatgaagattgttggt |
10032384 |
T |
|
| Q |
322 |
ctttactctcaaagcatgca |
341 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
10032385 |
ctttactctcaaagcatgca |
10032404 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 22 - 341
Target Start/End: Original strand, 10184324 - 10184643
Alignment:
| Q |
22 |
atattacgagagtaaccaagtctctgcttgaatctgtcacttctagaacttgggagagcaataatcttgattttcttcgagttgaattaaagaaaagctc |
121 |
Q |
| |
|
|||||| |||||||||||||||||| ||||||||||||||||| | ||||||||| ||||||||||||||| | ||||||||||| ||||||||| || |
|
|
| T |
10184324 |
atattatgagagtaaccaagtctctccttgaatctgtcacttccacaacttgggatagcaataatcttgatgtccttcgagttgagttaaagaaacattc |
10184423 |
T |
|
| Q |
122 |
gaaggagaaaagatttttgtttgtgctggatgatctgtggaatgacaattataatgattgggatgagctagtaagtcccttcattgatggaaaacctgga |
221 |
Q |
| |
|
| ||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10184424 |
aagggagaaaagatttttgtttgtattggatgatctgtggaatgacagttatgatgattgggatgagctagtaagtcccttcattgatggaaaacctgga |
10184523 |
T |
|
| Q |
222 |
agtagggtgattgtaacaacacgcaaacaaaaagttgcagaggtagcacacacatttcctattcataaattagaacctctatcaaatgatgattgttggt |
321 |
Q |
| |
|
|| | ||||||| ||||||| ||| || ||||||| || ||||| ||||||||||||||||| ||| || || ||| |||||||||||| |||||||||| |
|
|
| T |
10184524 |
agcatggtgattataacaacgcgccaagaaaaagtagctgaggtggcacacacatttcctatacatgaactaaaacttctatcaaatgaagattgttggt |
10184623 |
T |
|
| Q |
322 |
ctttactctcaaagcatgca |
341 |
Q |
| |
|
| |||||||||||||||||| |
|
|
| T |
10184624 |
cgttactctcaaagcatgca |
10184643 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 22 - 341
Target Start/End: Complemental strand, 10363785 - 10363466
Alignment:
| Q |
22 |
atattacgagagtaaccaagtctctgcttgaatctgtcacttctagaacttgggagagcaataatcttgattttcttcgagttgaattaaagaaaagctc |
121 |
Q |
| |
|
|||||| ||||||||| |||||||| |||||||||| |||||| | ||||| ||| ||||||||||||||| | ||||||||||| |||||||||| ||| |
|
|
| T |
10363785 |
atattatgagagtaacaaagtctctccttgaatctgccacttccataacttcggaaagcaataatcttgatgtccttcgagttgagttaaagaaaatctc |
10363686 |
T |
|
| Q |
122 |
gaaggagaaaagatttttgtttgtgctggatgatctgtggaatgacaattataatgattgggatgagctagtaagtcccttcattgatggaaaacctgga |
221 |
Q |
| |
|
|| ||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||| |
|
|
| T |
10363685 |
gagggagaaaagatatttgtttgtgttggacgatctgtggaatgacaattataatgattggggtgaactagtaagccccttcattgatggaaaacctgga |
10363586 |
T |
|
| Q |
222 |
agtagggtgattgtaacaacacgcaaacaaaaagttgcagaggtagcacacacatttcctattcataaattagaacctctatcaaatgatgattgttggt |
321 |
Q |
| |
|
|| | ||||||| ||||||| ||| || ||||||| || ||||| ||||||||||||||||| ||||||||||| | |||||||||||| ||||||||| |
|
|
| T |
10363585 |
agcatggtgattataacaacgcgccaagaaaaagtagctgaggtggcacacacatttcctatacataaattagatcttctatcaaatgaagattgttgga |
10363486 |
T |
|
| Q |
322 |
ctttactctcaaagcatgca |
341 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
10363485 |
ctttactctcaaagcatgca |
10363466 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 22 - 341
Target Start/End: Original strand, 10077351 - 10077670
Alignment:
| Q |
22 |
atattacgagagtaaccaagtctctgcttgaatctgtcacttctagaacttgggagagcaataatcttgattttcttcgagttgaattaaagaaaagctc |
121 |
Q |
| |
|
|||||| |||||||||||||||||| |||||||| ||||||||||||||||||| | |||| |||||||| | ||||||||||| ||||| |||| ||| |
|
|
| T |
10077351 |
atattatgagagtaaccaagtctctccttgaatcgatcacttctagaacttgggataacaatgatcttgatgtccttcgagttgagttaaaaaaaaactc |
10077450 |
T |
|
| Q |
122 |
gaaggagaaaagatttttgtttgtgctggatgatctgtggaatgacaattataatgattgggatgagctagtaagtcccttcattgatggaaaacctgga |
221 |
Q |
| |
|
|| ||| |||||||||||||||||| | |||||| |||||||||||||||||| |||||||||||| || ||||||||||||||||||||||| | |||| |
|
|
| T |
10077451 |
gagggataaaagatttttgtttgtgttagatgatatgtggaatgacaattatagtgattgggatgaacttgtaagtcccttcattgatggaaagcatgga |
10077550 |
T |
|
| Q |
222 |
agtagggtgattgtaacaacacgcaaacaaaaagttgcagaggtagcacacacatttcctattcataaattagaacctctatcaaatgatgattgttggt |
321 |
Q |
| |
|
|| | ||||||| ||||||||||| ||||||||||||||||||| |||| |||||||||||| |||| |||||||||| |||||||||| |||||||||| |
|
|
| T |
10077551 |
agcatggtgattataacaacacgccaacaaaaagttgcagaggtggcacgcacatttcctatacatatattagaacctttatcaaatgaagattgttggt |
10077650 |
T |
|
| Q |
322 |
ctttactctcaaagcatgca |
341 |
Q |
| |
|
|||||| |||||||||||| |
|
|
| T |
10077651 |
atttactttcaaagcatgca |
10077670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 22 - 341
Target Start/End: Original strand, 10088872 - 10089191
Alignment:
| Q |
22 |
atattacgagagtaaccaagtctctgcttgaatctgtcacttctagaacttgggagagcaataatcttgattttcttcgagttgaattaaagaaaagctc |
121 |
Q |
| |
|
|||||| ||||||||| |||||||| ||||||||||||||||| | ||||| ||| |||||| |||||| | | |||| |||||| |||||||||| ||| |
|
|
| T |
10088872 |
atattatgagagtaacaaagtctctccttgaatctgtcacttcgacaacttcggatagcaatgatcttggtgtccttcaagttgagttaaagaaaaactc |
10088971 |
T |
|
| Q |
122 |
gaaggagaaaagatttttgtttgtgctggatgatctgtggaatgacaattataatgattgggatgagctagtaagtcccttcattgatggaaaacctgga |
221 |
Q |
| |
|
|| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| |
|
|
| T |
10088972 |
gagggagaaaagatttttgtttgtgttggatgatctgtggaatgacaattataatgattggattgcactagtaagtcccttcattgatggaaaacctgga |
10089071 |
T |
|
| Q |
222 |
agtagggtgattgtaacaacacgcaaacaaaaagttgcagaggtagcacacacatttcctattcataaattagaacctctatcaaatgatgattgttggt |
321 |
Q |
| |
|
|| | ||||||| ||||||| ||| || ||||||| || ||||| ||||||||||||||||| ||||||||||||| ||| |||||||| ||||||||| |
|
|
| T |
10089072 |
agcatggtgattataacaacgcgccaagaaaaagtagctgaggtggcacacacatttcctatacataaattagaacttctgtcaaatgaagattgttgga |
10089171 |
T |
|
| Q |
322 |
ctttactctcaaagcatgca |
341 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
10089172 |
ctttactctcaaagcatgca |
10089191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 22 - 341
Target Start/End: Original strand, 10195755 - 10196074
Alignment:
| Q |
22 |
atattacgagagtaaccaagtctctgcttgaatctgtcacttctagaacttgggagagcaataatcttgattttcttcgagttgaattaaagaaaagctc |
121 |
Q |
| |
|
|||||| ||||||||| |||||||| ||||||||||||||||| | ||||| ||| |||||| |||||| | | |||| |||||| |||||||||| ||| |
|
|
| T |
10195755 |
atattatgagagtaacaaagtctctccttgaatctgtcacttcgacaacttcggatagcaatgatcttggtgtccttcaagttgagttaaagaaaaactc |
10195854 |
T |
|
| Q |
122 |
gaaggagaaaagatttttgtttgtgctggatgatctgtggaatgacaattataatgattgggatgagctagtaagtcccttcattgatggaaaacctgga |
221 |
Q |
| |
|
|| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| |
|
|
| T |
10195855 |
gagggagaaaagatttttgtttgtgttggatgatctgtggaatgacaattataatgattggattgcactagtaagtcccttcattgatggaaaacctgga |
10195954 |
T |
|
| Q |
222 |
agtagggtgattgtaacaacacgcaaacaaaaagttgcagaggtagcacacacatttcctattcataaattagaacctctatcaaatgatgattgttggt |
321 |
Q |
| |
|
|| | ||||||| ||||||| ||| || ||||||| || ||||| ||||||||||||||||| ||||||||||||| ||| |||||||| ||||||||| |
|
|
| T |
10195955 |
agcatggtgattataacaacgcgccaagaaaaagtagctgaggtggcacacacatttcctatacataaattagaacttctgtcaaatgaagattgttgga |
10196054 |
T |
|
| Q |
322 |
ctttactctcaaagcatgca |
341 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
10196055 |
ctttactctcaaagcatgca |
10196074 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 22 - 361
Target Start/End: Original strand, 10580683 - 10581022
Alignment:
| Q |
22 |
atattacgagagtaaccaagtctctgcttgaatctgtcacttctagaacttgggagagcaataatcttgattttcttcgagttgaattaaagaaaagctc |
121 |
Q |
| |
|
|||||| ||||||||| |||||||| ||||||||||||||||| | ||||| ||| ||||||||||||||| | ||||| ||||| |||||||||| ||| |
|
|
| T |
10580683 |
atattatgagagtaacaaagtctctccttgaatctgtcacttccacaacttcggaaagcaataatcttgatgtccttcgtgttgagttaaagaaaatctc |
10580782 |
T |
|
| Q |
122 |
gaaggagaaaagatttttgtttgtgctggatgatctgtggaatgacaattataatgattgggatgagctagtaagtcccttcattgatggaaaacctgga |
221 |
Q |
| |
|
| |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
10580783 |
aagggagaaaagatttttgtttgtgttggatgatctgtggaatgacaattgtaatgattgggatgagctagtaagtcccttcattaatggaaaacctgga |
10580882 |
T |
|
| Q |
222 |
agtagggtgattgtaacaacacgcaaacaaaaagttgcagaggtagcacacacatttcctattcataaattagaacctctatcaaatgatgattgttggt |
321 |
Q |
| |
|
|| | ||||||| ||||||| ||| ||||||||||| || || | ||||||| ||| || | ||||| |||||||||||||||||||| |||||||||| |
|
|
| T |
10580883 |
agcatggtgattataacaacgcgccaacaaaaagttacaaagatggcacacatgtttgctgtacataatttagaacctctatcaaatgaagattgttggt |
10580982 |
T |
|
| Q |
322 |
ctttactctcaaagcatgcaatgtgaagttaggagtttca |
361 |
Q |
| |
|
||||||||||||| ||||| || ||||| | |||||||| |
|
|
| T |
10580983 |
ctttactctcaaactatgcattgggaagtgatgagtttca |
10581022 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 22 - 350
Target Start/End: Original strand, 10127010 - 10127338
Alignment:
| Q |
22 |
atattacgagagtaaccaagtctctgcttgaatctgtcacttctagaacttgggagagcaataatcttgattttcttcgagttgaattaaagaaaagctc |
121 |
Q |
| |
|
|||||| ||||||||| |||||||| ||||||||||||||||| | ||||||||| ||||||||||||||| | |||||||||| |||||||||| ||| |
|
|
| T |
10127010 |
atattatgagagtaacaaagtctctccttgaatctgtcacttccacaacttgggatagcaataatcttgatgtccttcgagttgcgttaaagaaaatctc |
10127109 |
T |
|
| Q |
122 |
gaaggagaaaagatttttgtttgtgctggatgatctgtggaatgacaattataatgattgggatgagctagtaagtcccttcattgatggaaaacctgga |
221 |
Q |
| |
|
|| ||| |||||||||||||||||| |||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
10127110 |
gagggaaaaaagatttttgtttgtgttggacgatctatggaatgacaattgtaatgattgggatgagctagtaagtcccttcattaatggaaaacctgga |
10127209 |
T |
|
| Q |
222 |
agtagggtgattgtaacaacacgcaaacaaaaagttgcagaggtagcacacacatttcctattcataaattagaacctctatcaaatgatgattgttggt |
321 |
Q |
| |
|
|| | ||||||| ||||||| ||| ||||||||||||| ||||| |||| |||||||||||| ||| || || || |||||| |||| |||||||||| |
|
|
| T |
10127210 |
agcatggtgattataacaacgcgccaacaaaaagttgctgaggtggcacgcacatttcctatacatgaactaaaagtactatcagatgaagattgttggt |
10127309 |
T |
|
| Q |
322 |
ctttactctcaaagcatgcaatgtgaagt |
350 |
Q |
| |
|
||||||| |||||||||||| || ||||| |
|
|
| T |
10127310 |
ctttactatcaaagcatgcattgggaagt |
10127338 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 22 - 341
Target Start/End: Original strand, 10260780 - 10261099
Alignment:
| Q |
22 |
atattacgagagtaaccaagtctctgcttgaatctgtcacttctagaacttgggagagcaataatcttgattttcttcgagttgaattaaagaaaagctc |
121 |
Q |
| |
|
|||||| |||||||||||||||||| |||||||| ||||||||||||| |||||| | |||||||||||| | ||||||||||| |||||||||| ||| |
|
|
| T |
10260780 |
atattatgagagtaaccaagtctctccttgaatcagtcacttctagaaattgggatatcaataatcttgacatccttcgagttgagttaaagaaaatctc |
10260879 |
T |
|
| Q |
122 |
gaaggagaaaagatttttgtttgtgctggatgatctgtggaatgacaattataatgattgggatgagctagtaagtcccttcattgatggaaaacctgga |
221 |
Q |
| |
|
|| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||| |||||||| |||||| ||||||||||||||||| |
|
|
| T |
10260880 |
gagggagaaaagatttttgtttgtgttggacgatctgtggaatgacaattataatgattggggtgaactagtaagccccttcgttgatggaaaacctgga |
10260979 |
T |
|
| Q |
222 |
agtagggtgattgtaacaacacgcaaacaaaaagttgcagaggtagcacacacatttcctattcataaattagaacctctatcaaatgatgattgttggt |
321 |
Q |
| |
|
|| | ||||||| ||||||| || ||||||||||||| ||||| ||| |||||||||||| ||| || || ||| |||||| ||||| || ||||||| |
|
|
| T |
10260980 |
agcatggtgattataacaacgcggcaacaaaaagttgctgaggtggcatgcacatttcctatacatgaactaaaacttctatcgaatgaagactgttggt |
10261079 |
T |
|
| Q |
322 |
ctttactctcaaagcatgca |
341 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
10261080 |
ctttactctcaaagcatgca |
10261099 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 29 - 341
Target Start/End: Complemental strand, 10375825 - 10375513
Alignment:
| Q |
29 |
gagagtaaccaagtctctgcttgaatctgtcacttctagaacttgggagagcaataatcttgattttcttcgagttgaattaaagaaaagctcgaaggag |
128 |
Q |
| |
|
|||||||||||||||||| |||||||| |||||||| ||||| ||||| ||||||||||||||| | |||||||||| |||||||||| || | |||| |
|
|
| T |
10375825 |
gagagtaaccaagtctctccttgaatcggtcacttcaagaacatgggatagcaataatcttgatgtccttcgagttgcgttaaagaaaaaatcaagggag |
10375726 |
T |
|
| Q |
129 |
aaaagatttttgtttgtgctggatgatctgtggaatgacaattataatgattgggatgagctagtaagtcccttcattgatggaaaacctggaagtaggg |
228 |
Q |
| |
|
|||||||||||||||||| |||||||| ||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||||| ||||| | || |
|
|
| T |
10375725 |
aaaagatttttgtttgtgttggatgatttgtggaatgacaattattatgattggggtgaactagtaagtcccttcattgatggaaaacccggaagcatgg |
10375626 |
T |
|
| Q |
229 |
tgattgtaacaacacgcaaacaaaaagttgcagaggtagcacacacatttcctattcataaattagaacctctatcaaatgatgattgttggtctttact |
328 |
Q |
| |
|
||||| ||||||| ||| ||| ||||||||| |||||||| |||||||||||| ||| || || ||| |||||| ||||| || |||||||||||||| |
|
|
| T |
10375625 |
tgattataacaacgcgccaacgaaaagttgctaaggtagcatgcacatttcctatacatgaactaaaacttctatcgaatgaagactgttggtctttact |
10375526 |
T |
|
| Q |
329 |
ctcaaagcatgca |
341 |
Q |
| |
|
||||||||||||| |
|
|
| T |
10375525 |
ctcaaagcatgca |
10375513 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 72 - 361
Target Start/End: Original strand, 10527490 - 10527779
Alignment:
| Q |
72 |
tgggagagcaataatcttgattttcttcgagttgaattaaagaaaagctcgaaggagaaaagatttttgtttgtgctggatgatctgtggaatgacaatt |
171 |
Q |
| |
|
||||| ||||||||||||||| | ||||||||| | |||||||||| ||| | |||||| ||||||||||||||| |||||||||| ||||||||||||| |
|
|
| T |
10527490 |
tgggaaagcaataatcttgatatccttcgagttcagttaaagaaaatctcaagggagaagagatttttgtttgtgttggatgatctatggaatgacaatt |
10527589 |
T |
|
| Q |
172 |
ataatgattgggatgagctagtaagtcccttcattgatggaaaacctggaagtagggtgattgtaacaacacgcaaacaaaaagttgcagaggtagcaca |
271 |
Q |
| |
|
| |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||| | | ||| ||||||||| ||||| |||| |
|
|
| T |
10527590 |
acaatgattgggatgagctagtaagtccactcattgatggaaaacctggaagtatggtgattataacaacccaccaacgaaaagttgctgaggtggcacg |
10527689 |
T |
|
| Q |
272 |
cacatttcctattcataaattagaacctctatcaaatgatgattgttggtctttactctcaaagcatgcaatgtgaagttaggagtttca |
361 |
Q |
| |
|
|||||||||||| |||||| || ||| | |||||||||| |||||||||||||||||||||||||||||| || ||||| | |||||||| |
|
|
| T |
10527690 |
cacatttcctatacataaactaaaacttttatcaaatgaagattgttggtctttactctcaaagcatgcattgggaagtgatgagtttca |
10527779 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 43 - 341
Target Start/End: Complemental strand, 11159983 - 11159685
Alignment:
| Q |
43 |
ctctgcttgaatctgtcacttctagaacttgggagagcaataatcttgattttcttcgagttgaattaaagaaaagctcgaaggagaaaagatttttgtt |
142 |
Q |
| |
|
|||| ||||||||||||||||| ||| ||||||| | |||||||||||||||||||||||||||| ||||||||| | || || |||||||||||||| |
|
|
| T |
11159983 |
ctcttcttgaatctgtcacttcaagagcttgggaaaccaataatcttgattttcttcgagttgaactaaagaaaactttgagcgacaaaagatttttgtt |
11159884 |
T |
|
| Q |
143 |
tgtgctggatgatctgtggaatgacaattataatgattgggatgagctagtaagtcccttcattgatggaaaacctggaagtagggtgattgtaacaaca |
242 |
Q |
| |
|
|||| ||||||| || ||||||||||||||||||||||||||||| || |||| ||| || ||| ||||||| |||||| ||||| || || |||||| |
|
|
| T |
11159883 |
tgtgttggatgacctttggaatgacaattataatgattgggatgaacttgtaactcctttgattaatggaaacagtggaagcagggtcatcgtcacaaca |
11159784 |
T |
|
| Q |
243 |
cgcaaacaaaaagttgcagaggtagcacacacatttcctattcataaattagaacctctatcaaatgatgattgttggtctttactctcaaagcatgca |
341 |
Q |
| |
|
||| ||||||||||||||||||| ||||| |||||||||||||||||||||||| | |||| ||||| ||| |||||||||||||||||||||||| |
|
|
| T |
11159783 |
cgccaacaaaaagttgcagaggttgcacatacatttcctattcataaattagaagttttatctaatgaagatacatggtctttactctcaaagcatgca |
11159685 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 43 - 341
Target Start/End: Original strand, 8861389 - 8861687
Alignment:
| Q |
43 |
ctctgcttgaatctgtcacttctagaacttgggagagcaataatcttgattttcttcgagttgaattaaagaaaagctcgaaggagaaaagatttttgtt |
142 |
Q |
| |
|
|||| ||||||||||||||||| ||| ||||||| | |||||||||||||||||||||||||||| ||||||||| | || || |||||||||||||| |
|
|
| T |
8861389 |
ctcttcttgaatctgtcacttcaagagcttgggaaaacaataatcttgattttcttcgagttgaactaaagaaaacattgagagacaaaagatttttgtt |
8861488 |
T |
|
| Q |
143 |
tgtgctggatgatctgtggaatgacaattataatgattgggatgagctagtaagtcccttcattgatggaaaacctggaagtagggtgattgtaacaaca |
242 |
Q |
| |
|
|||| ||||||| || |||||||||||||||||||| |||||||| || |||| ||| || ||| ||||||| |||||| ||||| || || |||||| |
|
|
| T |
8861489 |
tgtgttggatgacctatggaatgacaattataatgagtgggatgaacttgtaactcctttgattaatggaaacagtggaagcagggtcatcgtcacaaca |
8861588 |
T |
|
| Q |
243 |
cgcaaacaaaaagttgcagaggtagcacacacatttcctattcataaattagaacctctatcaaatgatgattgttggtctttactctcaaagcatgca |
341 |
Q |
| |
|
||| ||||||||||||||||||| ||||| |||||||||||||||||||||||| | |||| ||||| ||| |||||||||||||||||||||||| |
|
|
| T |
8861589 |
cgccaacaaaaagttgcagaggttgcacatacatttcctattcataaattagaagttttatctaatgaagatacatggtctttactctcaaagcatgca |
8861687 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 71 - 341
Target Start/End: Complemental strand, 11781920 - 11781650
Alignment:
| Q |
71 |
ttgggagagcaataatcttgattttcttcgagttgaattaaagaaaagctcgaaggagaaaagatttttgtttgtgctggatgatctgtggaatgacaat |
170 |
Q |
| |
|
|||||| ||| ||||||||||| | |||||||||||||| || || | ||||| |||||||||||||||||||||| | |||||| |||||||||| || |
|
|
| T |
11781920 |
ttgggaaagcgataatcttgatatccttcgagttgaattgaaaaagaactcgagggagaaaagatttttgtttgtgttagatgatttgtggaatgatgat |
11781821 |
T |
|
| Q |
171 |
tataatgattgggatgagctagtaagtcccttcattgatggaaaacctggaagtagggtgattgtaacaacacgcaaacaaaaagttgcagaggtagcac |
270 |
Q |
| |
|
|| ||||||||| ||||||||||||||| ||| ||||||||||||||||||| ||||||| ||||||| ||| ||||||||||||||||||| |||| |
|
|
| T |
11781820 |
tacaatgattggcttgagctagtaagtccactcaatgatggaaaacctggaagttcggtgattataacaactcgccaacaaaaagttgcagaggtggcac |
11781721 |
T |
|
| Q |
271 |
acacatttcctattcataaattagaacctctatcaaatgatgattgttggtctttactctcaaagcatgca |
341 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||| || |||||| |
|
|
| T |
11781720 |
acacatttcctattcatgcattagaacctctatctcatgaagattgttggtctttactctcgaaacatgca |
11781650 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 30 - 341
Target Start/End: Complemental strand, 11131005 - 11130694
Alignment:
| Q |
30 |
agagtaaccaagtctctgcttgaatctgtcacttctagaacttgggagagcaataatcttgattttcttcgagttgaattaaagaaaagctcgaaggaga |
129 |
Q |
| |
|
|||||||| || |||| ||||||||||||||||| || ||||||| | |||||||||||||||||||||||||||| | ||||||| | || || | |
|
|
| T |
11131005 |
agagtaactaaaactctccttgaatctgtcacttcaagggcttgggaaaacaataatcttgattttcttcgagttgaactgaagaaaactttgagagaca |
11130906 |
T |
|
| Q |
130 |
aaagatttttgtttgtgctggatgatctgtggaatgacaattataatgattgggatgagctagtaagtcccttcattgatggaaaacctggaagtagggt |
229 |
Q |
| |
|
||||||||||||||||| ||||||| || ||||||||||||||||||||||||||||| || |||| ||| || ||| ||||||| |||||| ||||| |
|
|
| T |
11130905 |
aaagatttttgtttgtgttggatgacctatggaatgacaattataatgattgggatgaacttgtaactcctttgattaatggaaacaatggaagcagggt |
11130806 |
T |
|
| Q |
230 |
gattgtaacaacacgcaaacaaaaagttgcagaggtagcacacacatttcctattcataaattagaacctctatcaaatgatgattgttggtctttactc |
329 |
Q |
| |
|
|| || ||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||| | |||| ||||| ||| |||||||||||| |
|
|
| T |
11130805 |
catcgtcacaacacgccaacaaaaagttgcagaggttgcacatacatttcctattcataaattagaagttttatctaatgaagatacatggtctttactc |
11130706 |
T |
|
| Q |
330 |
tcaaagcatgca |
341 |
Q |
| |
|
|||||||||||| |
|
|
| T |
11130705 |
tcaaagcatgca |
11130694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 71 - 341
Target Start/End: Original strand, 10517616 - 10517886
Alignment:
| Q |
71 |
ttgggagagcaataatcttgattttcttcgagttgaattaaagaaaagctcgaaggagaaaagatttttgtttgtgctggatgatctgtggaatgacaat |
170 |
Q |
| |
|
|||||| ||| ||||||||||| | |||||||||||||| || || | ||||| |||||||||||||||||||||| | |||||| |||||||||| || |
|
|
| T |
10517616 |
ttgggaaagcgataatcttgatatccttcgagttgaattgaaaaagaactcgagggagaaaagatttttgtttgtgttagatgatttgtggaatgatgat |
10517715 |
T |
|
| Q |
171 |
tataatgattgggatgagctagtaagtcccttcattgatggaaaacctggaagtagggtgattgtaacaacacgcaaacaaaaagttgcagaggtagcac |
270 |
Q |
| |
|
|| ||||||||| ||| ||||||||||| ||| |||||||||||| || ||| ||||||| ||||||| ||| ||||||||||||||||||| |||| |
|
|
| T |
10517716 |
tacaatgattggcttgaactagtaagtccactcaatgatggaaaacccgggagttcggtgattataacaacgcgccaacaaaaagttgcagaggtggcac |
10517815 |
T |
|
| Q |
271 |
acacatttcctattcataaattagaacctctatcaaatgatgattgttggtctttactctcaaagcatgca |
341 |
Q |
| |
|
|||||||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||| |||||| |
|
|
| T |
10517816 |
acacatttcctattcaggaattagaacctctatctcatgaagattgttggtctttactctcaaaacatgca |
10517886 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 50 - 341
Target Start/End: Original strand, 13161090 - 13161381
Alignment:
| Q |
50 |
tgaatctgtcacttctagaacttgggagagcaataatcttgattttcttcgagttgaattaaagaaaagctcgaaggagaaaagatttttgtttgtgctg |
149 |
Q |
| |
|
|||||||||||| || ||| || | || |||||||||||||||| |||||||||||| || || |||| || || ||| |||||||||||||| |||||| |
|
|
| T |
13161090 |
tgaatctgtcacctcaagagctggcgaaagcaataatcttgattctcttcgagttgagttgaataaaaacttgagggataaaagatttttgttagtgctg |
13161189 |
T |
|
| Q |
150 |
gatgatctgtggaatgacaattataatgattgggatgagctagtaagtcccttcattgatggaaaacctggaagtagggtgattgtaacaacacgcaaac |
249 |
Q |
| |
|
|| |||||||||||||| | ||||||||||||||||||| |||||| ||| || ||| | || ||| | |||||||||||||| | ||||||||| ||| |
|
|
| T |
13161190 |
gacgatctgtggaatgatagttataatgattgggatgagttagtaactccattgattaacggcaaaacgggaagtagggtgatcatcacaacacgccaac |
13161289 |
T |
|
| Q |
250 |
aaaaagttgcagaggtagcacacacatttcctattcataaattagaacctctatcaaatgatgattgttggtctttactctcaaagcatgca |
341 |
Q |
| |
|
|||||||||| ||||| |||||||| ||||||||||| ||| |||| ||||||||| ||||||| |||||||| ||||| |||||||||||| |
|
|
| T |
13161290 |
aaaaagttgcggaggttgcacacacgtttcctattcacaaagtagatcctctatcagatgatgactgttggtcgttactttcaaagcatgca |
13161381 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 50 - 341
Target Start/End: Original strand, 13333014 - 13333305
Alignment:
| Q |
50 |
tgaatctgtcacttctagaacttgggagagcaataatcttgattttcttcgagttgaattaaagaaaagctcgaaggagaaaagatttttgtttgtgctg |
149 |
Q |
| |
|
||||||||||||||| ||| | | || | |||||||||||||||||||||||||||||| || |||| || || ||| |||||||||||||| ||| || |
|
|
| T |
13333014 |
tgaatctgtcacttcaagaggtggtgaaaacaataatcttgattttcttcgagttgaattgaataaaaacttgagggataaaagatttttgttagtgttg |
13333113 |
T |
|
| Q |
150 |
gatgatctgtggaatgacaattataatgattgggatgagctagtaagtcccttcattgatggaaaacctggaagtagggtgattgtaacaacacgcaaac |
249 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||| |||||| ||| | ||| | || ||| |||||||||||||| | ||||||||| ||| |
|
|
| T |
13333114 |
gatgacctgtggaatgacaattataatgattgggatgagttagtaactccactgattaacggcaaaaaaggaagtagggtgatcatcacaacacgccaac |
13333213 |
T |
|
| Q |
250 |
aaaaagttgcagaggtagcacacacatttcctattcataaattagaacctctatcaaatgatgattgttggtctttactctcaaagcatgca |
341 |
Q |
| |
|
|||||||||| ||||| |||||||| ||||||||||| ||| |||| ||||||||| ||||||| |||||||| ||||| |||||||||||| |
|
|
| T |
13333214 |
aaaaagttgcggaggttgcacacacgtttcctattcacaaagtagatcctctatcagatgatgactgttggtcgttactttcaaagcatgca |
13333305 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 30 - 341
Target Start/End: Complemental strand, 11148833 - 11148522
Alignment:
| Q |
30 |
agagtaaccaagtctctgcttgaatctgtcacttctagaacttgggagagcaataatcttgattttcttcgagttgaattaaagaaaagctcgaaggaga |
129 |
Q |
| |
|
|||||||| || |||| ||||||||||||||||| || ||||||| | |||||||||||||||||||||||||||| | ||||||| | || | | |
|
|
| T |
11148833 |
agagtaactaaaactctccttgaatctgtcacttcaagggcttgggaaaacaataatcttgattttcttcgagttgaactgaagaaaactttgagagcca |
11148734 |
T |
|
| Q |
130 |
aaagatttttgtttgtgctggatgatctgtggaatgacaattataatgattgggatgagctagtaagtcccttcattgatggaaaacctggaagtagggt |
229 |
Q |
| |
|
||||||||||||||||| ||||||| | ||||||||||||||||||||||||||||| || |||| || || ||| ||||||| |||||| ||||| |
|
|
| T |
11148733 |
aaagatttttgtttgtgttggatgacttatggaatgacaattataatgattgggatgaacttgtaacacctttgattaatggaaacagtggaagcagggt |
11148634 |
T |
|
| Q |
230 |
gattgtaacaacacgcaaacaaaaagttgcagaggtagcacacacatttcctattcataaattagaacctctatcaaatgatgattgttggtctttactc |
329 |
Q |
| |
|
|| || ||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||| | |||| ||||| ||| |||||||||||| |
|
|
| T |
11148633 |
catcgtcacaacacgccaacaaaaagttgcagaggttgcacatacatttcctattcataaattagaagttttatctaatgaagatacatggtctttactc |
11148534 |
T |
|
| Q |
330 |
tcaaagcatgca |
341 |
Q |
| |
|
|||||||||||| |
|
|
| T |
11148533 |
tcaaagcatgca |
11148522 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 50 - 341
Target Start/End: Original strand, 13171141 - 13171432
Alignment:
| Q |
50 |
tgaatctgtcacttctagaacttgggagagcaataatcttgattttcttcgagttgaattaaagaaaagctcgaaggagaaaagatttttgtttgtgctg |
149 |
Q |
| |
|
||||||||||||||| ||| | | || | |||||||||||||||||||||||||||||| || ||| || || ||| |||||||||||||| |||||| |
|
|
| T |
13171141 |
tgaatctgtcacttcaagaggtggtgaaaacaataatcttgattttcttcgagttgaattgaatcaaaacttgagggataaaagatttttgttagtgctg |
13171240 |
T |
|
| Q |
150 |
gatgatctgtggaatgacaattataatgattgggatgagctagtaagtcccttcattgatggaaaacctggaagtagggtgattgtaacaacacgcaaac |
249 |
Q |
| |
|
|| |||||||||||||| | ||||||||||||||||||| |||||| ||| || ||| | || ||| | ||||||| |||||| | ||||||||| ||| |
|
|
| T |
13171241 |
gacgatctgtggaatgatagttataatgattgggatgagttagtaactccattgattaacggcaaaacgggaagtatggtgatcatcacaacacgccaac |
13171340 |
T |
|
| Q |
250 |
aaaaagttgcagaggtagcacacacatttcctattcataaattagaacctctatcaaatgatgattgttggtctttactctcaaagcatgca |
341 |
Q |
| |
|
|||||||||| ||||| |||||||| ||||||||||| ||| |||| ||||||||| ||||||| |||||||| ||||| |||||||||||| |
|
|
| T |
13171341 |
aaaaagttgcggaggttgcacacacgtttcctattcacaaagtagatcctctatcagatgatgactgttggtcgttactttcaaagcatgca |
13171432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 50 - 341
Target Start/End: Original strand, 13289775 - 13290066
Alignment:
| Q |
50 |
tgaatctgtcacttctagaacttgggagagcaataatcttgattttcttcgagttgaattaaagaaaagctcgaaggagaaaagatttttgtttgtgctg |
149 |
Q |
| |
|
||||||||||||||| ||| | | || |||||||||||||||| ||||||||||||| | || ||| || || ||| |||||||||||||| |||||| |
|
|
| T |
13289775 |
tgaatctgtcacttcaagaggtggtgaaagcaataatcttgattctcttcgagttgaactgaatcaaaacttgagggataaaagatttttgttggtgctg |
13289874 |
T |
|
| Q |
150 |
gatgatctgtggaatgacaattataatgattgggatgagctagtaagtcccttcattgatggaaaacctggaagtagggtgattgtaacaacacgcaaac |
249 |
Q |
| |
|
|| |||||||||||||| | ||||||||||||||||||| |||||| ||| || ||| | || ||| | |||||||||||||| | ||||||||| ||| |
|
|
| T |
13289875 |
gacgatctgtggaatgatagttataatgattgggatgagttagtaactccattgattaacggcaaaacaggaagtagggtgatcatcacaacacgccaac |
13289974 |
T |
|
| Q |
250 |
aaaaagttgcagaggtagcacacacatttcctattcataaattagaacctctatcaaatgatgattgttggtctttactctcaaagcatgca |
341 |
Q |
| |
|
|||||||||| ||||| |||||||| ||||||||||| ||| |||| ||||||||| ||||||| |||||||| ||||| |||||||||||| |
|
|
| T |
13289975 |
aaaaagttgcggaggttgcacacacgtttcctattcacaaagtagatcctctatcagatgatgactgttggtcgttactttcaaagcatgca |
13290066 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 50 - 341
Target Start/End: Original strand, 13344199 - 13344490
Alignment:
| Q |
50 |
tgaatctgtcacttctagaacttgggagagcaataatcttgattttcttcgagttgaattaaagaaaagctcgaaggagaaaagatttttgtttgtgctg |
149 |
Q |
| |
|
||||||||||||||| ||| | | || | |||||||||||||||||||||||||||||| || ||| || || ||| |||||||||||||| |||||| |
|
|
| T |
13344199 |
tgaatctgtcacttcaagaggtggtgaaaacaataatcttgattttcttcgagttgaattgaatcaaaacttgagggataaaagatttttgttagtgctg |
13344298 |
T |
|
| Q |
150 |
gatgatctgtggaatgacaattataatgattgggatgagctagtaagtcccttcattgatggaaaacctggaagtagggtgattgtaacaacacgcaaac |
249 |
Q |
| |
|
|| |||||||||||||| | ||||||||||||||||||| |||||| ||| || ||| | || ||| | ||||||| |||||| | ||||||||| ||| |
|
|
| T |
13344299 |
gacgatctgtggaatgatagttataatgattgggatgagttagtaactccattgattaacggcaaaacgggaagtatggtgatcatcacaacacgccaac |
13344398 |
T |
|
| Q |
250 |
aaaaagttgcagaggtagcacacacatttcctattcataaattagaacctctatcaaatgatgattgttggtctttactctcaaagcatgca |
341 |
Q |
| |
|
|||||||||| ||||| |||||||| ||||||||||| ||| |||| ||||||||| ||||||| |||||||| ||||| |||||||||||| |
|
|
| T |
13344399 |
aaaaagttgcggaggttgcacacacgtttcctattcacaaagtagatcctctatcagatgatgactgttggtcgttactttcaaagcatgca |
13344490 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 43 - 341
Target Start/End: Original strand, 10889409 - 10889707
Alignment:
| Q |
43 |
ctctgcttgaatctgtcacttctagaacttgggagagcaataatcttgattttcttcgagttgaattaaagaaaagctcgaaggagaaaagatttttgtt |
142 |
Q |
| |
|
|||| ||||||||||| ||||| ||| ||||||| | ||||||||| |||||||||||||||||| ||||||||| | || || |||||||||||||| |
|
|
| T |
10889409 |
ctcttcttgaatctgtgacttcaagagcttgggaaaacaataatctagattttcttcgagttgaactaaagaaaactttgagagacaaaagatttttgtt |
10889508 |
T |
|
| Q |
143 |
tgtgctggatgatctgtggaatgacaattataatgattgggatgagctagtaagtcccttcattgatggaaaacctggaagtagggtgattgtaacaaca |
242 |
Q |
| |
|
|||| ||||||| || ||||||||||||||||||||||||||||| || |||| ||| || ||| ||||||| |||||| ||||| | | |||||| |
|
|
| T |
10889509 |
tgtgttggatgacctatggaatgacaattataatgattgggatgaacttgtaactcctttgattaatggaaacagtggaagcagggtcgtcatcacaaca |
10889608 |
T |
|
| Q |
243 |
cgcaaacaaaaagttgcagaggtagcacacacatttcctattcataaattagaacctctatcaaatgatgattgttggtctttactctcaaagcatgca |
341 |
Q |
| |
|
||| | ||||||||||||||||| |||||||| | ||||||||| ||||||||| | |||| ||||| ||| |||||||||||||||||||||||| |
|
|
| T |
10889609 |
cgccagcaaaaagttgcagaggttgcacacacgtatcctattcacaaattagaagttttatctaatgaagatacatggtctttactctcaaagcatgca |
10889707 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 78 - 341
Target Start/End: Original strand, 10500712 - 10500975
Alignment:
| Q |
78 |
agcaataatcttgattttcttcgagttgaattaaagaaaagctcgaaggagaaaagatttttgtttgtgctggatgatctgtggaatgacaattataatg |
177 |
Q |
| |
|
||||||||||||||| | |||| |||||| |||| |||| | || ||| | |||||||||||||||| |||| || |||||||||||| |||| || |
|
|
| T |
10500712 |
agcaataatcttgatatccttcaagttgagttaatgaaacatttgatggatagaagatttttgtttgtgttggacgacatgtggaatgacagttatgttg |
10500811 |
T |
|
| Q |
178 |
attgggatgagctagtaagtcccttcattgatggaaaacctggaagtagggtgattgtaacaacacgcaaacaaaaagttgcagaggtagcacacacatt |
277 |
Q |
| |
|
| ||||||||| || ||| |||||| | | | || || | ||| | | ||||| ||||||||||| ||||||||||||||||||| ||| |||||| |
|
|
| T |
10500812 |
actgggatgagttaataactcccttgactaacagagaaacaggaggcaaagtgataataacaacacgcgaacaaaaagttgcagaggtcgcatgcacatt |
10500911 |
T |
|
| Q |
278 |
tcctattcataaattagaacctctatcaaatgatgattgttggtctttactctcaaagcatgca |
341 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||| |
|
|
| T |
10500912 |
tcctattcataaattagaacctctatctgatgatgattgttggactttactctcgaagcatgca |
10500975 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 43 - 260
Target Start/End: Complemental strand, 11153739 - 11153523
Alignment:
| Q |
43 |
ctctgcttgaatctgtcacttctagaacttgggagagcaataatcttgattttcttcgagttgaattaaagaaaagctcgaaggaga-aaagatttttgt |
141 |
Q |
| |
|
|||| ||||||||||||||||| ||| | | || || || ||||||||||||||||||||||| |||||||||| || |||| |||||||||| |
|
|
| T |
11153739 |
ctctccttgaatctgtcacttcaagagcatatgaaagtaacaatcttgattttcttcgagttgagttaaagaaaattctga--gagacaaagattttttg |
11153642 |
T |
|
| Q |
142 |
ttgtgctggatgatctgtggaatgacaattataatgattgggatgagctagtaagtcccttcattgatggaaaacctggaagtagggtgattgtaacaac |
241 |
Q |
| |
|
||||| ||||||| | |||||||| |||||||| |||| ||||| || |||| ||| || ||| |||||||| |||||| || ||||| | ||||| |
|
|
| T |
11153641 |
ttgtgttggatgacttatggaatgataattataacgattcagatgaacttgtaactccattgatttatggaaaaagtggaagcagagtgatcatcacaac |
11153542 |
T |
|
| Q |
242 |
acgcaaacaaaaagttgca |
260 |
Q |
| |
|
|||| || ||||||||||| |
|
|
| T |
11153541 |
acgccaagaaaaagttgca |
11153523 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 196; Significance: 1e-106; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 22 - 361
Target Start/End: Original strand, 26906979 - 26907318
Alignment:
| Q |
22 |
atattacgagagtaaccaagtctctgcttgaatctgtcacttctagaacttgggagagcaataatcttgattttcttcgagttgaattaaagaaaagctc |
121 |
Q |
| |
|
|||||| |||||||||||| ||||| |||||||| |||||||| ||||||||||| | ||||||||||||| | ||||||||||| |||| ||||| ||| |
|
|
| T |
26906979 |
atattatgagagtaaccaaatctctccttgaatcggtcacttccagaacttgggataccaataatcttgatgtccttcgagttgagttaaggaaaaactc |
26907078 |
T |
|
| Q |
122 |
gaaggagaaaagatttttgtttgtgctggatgatctgtggaatgacaattataatgattgggatgagctagtaagtcccttcattgatggaaaacctgga |
221 |
Q |
| |
|
| |||||||||||||||||||||| ||||||| |||||||| |||||||||| ||||||||| || || ||||||||||||||| |||||||||||||| |
|
|
| T |
26907079 |
aagggagaaaagatttttgtttgtgttggatgacctgtggaacgacaattatagtgattgggaagaacttgtaagtcccttcattcatggaaaacctgga |
26907178 |
T |
|
| Q |
222 |
agtagggtgattgtaacaacacgcaaacaaaaagttgcagaggtagcacacacatttcctattcataaattagaacctctatcaaatgatgattgttggt |
321 |
Q |
| |
|
|| | ||||||| ||||||| ||| ||||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||| ||| |||||||||| |
|
|
| T |
26907179 |
agcatggtgattataacaacgcgccaacaaaaagttgcagaggtggcacatacatttcctatacataaattagaacctctatcaactgaagattgttggt |
26907278 |
T |
|
| Q |
322 |
ctttactctcaaagcatgcaatgtgaagttaggagtttca |
361 |
Q |
| |
|
|||||||||||||||||||| || ||||| | |||||||| |
|
|
| T |
26907279 |
ctttactctcaaagcatgcattgggaagtaaagagtttca |
26907318 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 124; Significance: 1e-63; HSPs: 3)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 50 - 341
Target Start/End: Complemental strand, 135847 - 135556
Alignment:
| Q |
50 |
tgaatctgtcacttctagaacttgggagagcaataatcttgattttcttcgagttgaattaaagaaaagctcgaaggagaaaagatttttgtttgtgctg |
149 |
Q |
| |
|
||||||||||||||| ||| | | || | |||||||||||||||||||||||||||||| || ||| || || ||| |||||||||||||| |||||| |
|
|
| T |
135847 |
tgaatctgtcacttcaagaggtggtgaaaacaataatcttgattttcttcgagttgaattgaatcaaaacttgagggataaaagatttttgttagtgctg |
135748 |
T |
|
| Q |
150 |
gatgatctgtggaatgacaattataatgattgggatgagctagtaagtcccttcattgatggaaaacctggaagtagggtgattgtaacaacacgcaaac |
249 |
Q |
| |
|
|| |||||||||||||| | ||||||||||||||||||| |||||| ||| || ||| | || ||| | ||||||| |||||| | ||||||||| ||| |
|
|
| T |
135747 |
gacgatctgtggaatgatagttataatgattgggatgagttagtaactccattgattaacggcaaaacgggaagtatggtgatcatcacaacacgccaac |
135648 |
T |
|
| Q |
250 |
aaaaagttgcagaggtagcacacacatttcctattcataaattagaacctctatcaaatgatgattgttggtctttactctcaaagcatgca |
341 |
Q |
| |
|
|||||||||| ||||| |||||||| ||||||||||| ||| |||| ||||||||| ||||||| |||||||| ||||| |||||||||||| |
|
|
| T |
135647 |
aaaaagttgcggaggttgcacacacgtttcctattcacaaagtagatcctctatcagatgatgactgttggtcgttactttcaaagcatgca |
135556 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 50 - 341
Target Start/End: Complemental strand, 145898 - 145607
Alignment:
| Q |
50 |
tgaatctgtcacttctagaacttgggagagcaataatcttgattttcttcgagttgaattaaagaaaagctcgaaggagaaaagatttttgtttgtgctg |
149 |
Q |
| |
|
||||||||||||||| ||| | | || | |||||||||||||||||||||||||||||| || ||| || || ||| |||||||||||||| |||||| |
|
|
| T |
145898 |
tgaatctgtcacttcaagaggtggtgaaaacaataatcttgattttcttcgagttgaattgaatcaaaacttgagggataaaagatttttgttagtgctg |
145799 |
T |
|
| Q |
150 |
gatgatctgtggaatgacaattataatgattgggatgagctagtaagtcccttcattgatggaaaacctggaagtagggtgattgtaacaacacgcaaac |
249 |
Q |
| |
|
|| |||||||||||||| | ||||||||||||||||||| |||||| ||| || ||| | || ||| | ||||||| |||||| | ||||||||| ||| |
|
|
| T |
145798 |
gacgatctgtggaatgatagttataatgattgggatgagttagtaactccattgattaacggcaaaacgggaagtatggtgatcatcacaacacgccaac |
145699 |
T |
|
| Q |
250 |
aaaaagttgcagaggtagcacacacatttcctattcataaattagaacctctatcaaatgatgattgttggtctttactctcaaagcatgca |
341 |
Q |
| |
|
|||||||||| ||||| |||||||| ||||||||||| ||| |||| ||||||||| ||||||| |||||||| ||||| |||||||||||| |
|
|
| T |
145698 |
aaaaagttgcggaggttgcacacacgtttcctattcacaaagtagatcctctatcagatgatgactgttggtcgttactttcaaagcatgca |
145607 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 237 - 341
Target Start/End: Complemental strand, 154016 - 153912
Alignment:
| Q |
237 |
acaacacgcaaacaaaaagttgcagaggtagcacacacatttcctattcataaattagaacctctatcaaatgatgattgttggtctttactctcaaagc |
336 |
Q |
| |
|
||||||||| ||||||||||||| ||||| |||||||| ||||||||||| ||| |||| ||||||||| ||||||| |||||||| ||||| ||||||| |
|
|
| T |
154016 |
acaacacgccaacaaaaagttgcggaggttgcacacacgtttcctattcacaaagtagatcctctatcagatgatgactgttggtcgttactttcaaagc |
153917 |
T |
|
| Q |
337 |
atgca |
341 |
Q |
| |
|
||||| |
|
|
| T |
153916 |
atgca |
153912 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 116; Significance: 7e-59; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 82 - 341
Target Start/End: Complemental strand, 31679660 - 31679401
Alignment:
| Q |
82 |
ataatcttgattttcttcgagttgaattaaagaaaagctcgaaggagaaaagatttttgtttgtgctggatgatctgtggaatgacaattataatgattg |
181 |
Q |
| |
|
|||||||||||||||||||||| |||||||| ||| || ||||| |||||||||||||||||| ||||||| |||||||||| | ||||||||||| |
|
|
| T |
31679660 |
ataatcttgattttcttcgagtcaaattaaagcaaaacttgaagggaaaaagatttttgtttgtgttggatgacatgtggaatgatagctataatgattg |
31679561 |
T |
|
| Q |
182 |
ggatgagctagtaagtcccttcattgatggaaaacctggaagtagggtgattgtaacaacacgcaaacaaaaagttgcagaggtagcacacacatttcct |
281 |
Q |
| |
|
| || | ||||| | |||||||||||||||| || ||||||||||||||||| | |||||||| || |||||||||| ||| | | || || |||||| |
|
|
| T |
31679560 |
gcatcatctagtcactcccttcattgatggagaatctggaagtagggtgattatcacaacacgtcaataaaaagttgccgagttcacccatacctttcct |
31679461 |
T |
|
| Q |
282 |
attcataaattagaacctctatcaaatgatgattgttggtctttactctcaaagcatgca |
341 |
Q |
| |
|
|| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |
|
|
| T |
31679460 |
atctataaattagaacctctatcagatgatgattgctggtctttactctcaaagcatgca |
31679401 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 86; Significance: 5e-41; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 72 - 341
Target Start/End: Original strand, 11485170 - 11485439
Alignment:
| Q |
72 |
tgggagagcaataatcttgattttcttcgagttgaattaaagaaaagctcgaaggagaaaagatttttgtttgtgctggatgatctgtggaatgacaatt |
171 |
Q |
| |
|
||||| ||||||||||||||| | |||| ||||||||||| ||| | |||||| | |||| ||||||||||| |||| || | ||||| ||||||| |
|
|
| T |
11485170 |
tgggaaagcaataatcttgatatccttcaagttgaattaatgaagcatttgaaggatagaagaattttgtttgtgttggacgacatatggaacgacaatt |
11485269 |
T |
|
| Q |
172 |
ataatgattgggatgagctagtaagtcccttcattgatggaaaacctggaagtagggtgattgtaacaacacgcaaacaaaaagttgcagaggtagcaca |
271 |
Q |
| |
|
|| |||||||||| | || ||| |||||| ||| ||||| || ||| ||| | |||||| ||||||||||| || | |||||||||||||| ||| |
|
|
| T |
11485270 |
atcttgattgggatcggttaataactcccttgattaatggagaaactgtaagcaaggtgatcataacaacacgcgaagagaaagttgcagaggtcgcatg |
11485369 |
T |
|
| Q |
272 |
cacatttcctattcataaattagaacctctatcaaatgatgattgttggtctttactctcaaagcatgca |
341 |
Q |
| |
|
| ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||| |
|
|
| T |
11485370 |
cgcatttcctattcataaattagaacctctatctgatgaagattgttggtctttactctcgaagcatgca |
11485439 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 235 - 341
Target Start/End: Complemental strand, 44957462 - 44957356
Alignment:
| Q |
235 |
taacaacacgcaaacaaaaagttgcagaggtagcacacacatttcctattcataaattagaacctctatcaaatgatgattgttggtctttactctcaaa |
334 |
Q |
| |
|
|||||||||| ||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||| |
|
|
| T |
44957462 |
taacaacacgtgaacaaaacgttgcagaggttgcacacacatttccgattcataaattagaacctctatctgatgaagattgttggtctttactctcaaa |
44957363 |
T |
|
| Q |
335 |
gcatgca |
341 |
Q |
| |
|
||||||| |
|
|
| T |
44957362 |
gcatgca |
44957356 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 72 - 182
Target Start/End: Complemental strand, 44957625 - 44957515
Alignment:
| Q |
72 |
tgggagagcaataatcttgattttcttcgagttgaattaaagaaaagctcgaaggagaaaagatttttgtttgtgctggatgatctgtggaatgacaatt |
171 |
Q |
| |
|
||||| ||| ||||||||||| | |||| ||||||||||| |||| | || ||| | |||||||||||||||| |||| || | ||||||||||||| |
|
|
| T |
44957625 |
tgggaaagcgataatcttgatatccttcaagttgaattaatgaaacatttgatggatagaagatttttgtttgtgttggacgacatatggaatgacaatt |
44957526 |
T |
|
| Q |
172 |
ataatgattgg |
182 |
Q |
| |
|
||| |||||| |
|
|
| T |
44957525 |
atatcgattgg |
44957515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 72 - 341
Target Start/End: Complemental strand, 17852860 - 17852591
Alignment:
| Q |
72 |
tgggagagcaataatcttgattttcttcgagttgaattaaagaaaagctcgaaggagaaaagatttttgtttgtgctggatgatctgtggaatgacaatt |
171 |
Q |
| |
|
||||| ||| ||||||||||| | || ||||||||||||| |||| | || ||| | |||||||||||||||| |||| || | ||||||||||||| |
|
|
| T |
17852860 |
tgggaaagcgataatcttgatatcctccgagttgaattaatgaaacaattgatggatagaagatttttgtttgtgttggacgacttatggaatgacaatt |
17852761 |
T |
|
| Q |
172 |
ataatgattgggatgagctagtaagtcccttcattgatggaaaacctggaagtagggtgattgtaacaacacgcaaacaaaaagttgcagaggtagcaca |
271 |
Q |
| |
|
| ||||||| ||||||||||| |||||| || | |||||| ||||||| | ||| || ||||||||||| | |||||||||| ||||| |||| |
|
|
| T |
17852760 |
acgttgattggagtgagctagtaactcccttgtttaagggaaaagctggaagcaaggtcatcataacaacacgcctaaaaaaagttgcggaggttgcacg |
17852661 |
T |
|
| Q |
272 |
cacatttcctattcataaattagaacctctatcaaatgatgattgttggtctttactctcaaagcatgca |
341 |
Q |
| |
|
||||||||| |||||||||||||||||| |||| |||| |||||||||||||| ||||||||||||||| |
|
|
| T |
17852660 |
cacatttccaattcataaattagaacctatatccgatgaagattgttggtctttgctctcaaagcatgca |
17852591 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 129 - 341
Target Start/End: Original strand, 826100 - 826312
Alignment:
| Q |
129 |
aaaagatttttgtttgtgctggatgatctgtggaatgacaattataatgattgggatgagctagtaagtcccttcattgatggaaaacctggaagtaggg |
228 |
Q |
| |
|
|||||||||||||||||| |||||| | |||||||| | ||||||||| ||| |||| ||| | ||| || || ||||||| ||||||||||| |
|
|
| T |
826100 |
aaaagatttttgtttgtgttggatggcttatggaatgatagttataatgactggcatgatctaattgctccattggttaatggaaattgtggaagtaggg |
826199 |
T |
|
| Q |
229 |
tgattgtaacaacacgcaaacaaaaagttgcagaggtagcacacacatttcctattcataaattagaacctctatcaaatgatgattgttggtctttact |
328 |
Q |
| |
|
|||| | ||||||||| | ||| |||||||||||| ||||| || | ||||||||||||||| ||||||||||| | || |||||||||||||||| |
|
|
| T |
826200 |
tgatcatcacaacacgctacgaaagagttgcagaggttgcacatacgtatcctattcataaattggaacctctatcggacgaacattgttggtctttact |
826299 |
T |
|
| Q |
329 |
ctcaaagcatgca |
341 |
Q |
| |
|
||| ||| ||||| |
|
|
| T |
826300 |
ctccaagtatgca |
826312 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 166
Target Start/End: Original strand, 29836732 - 29836869
Alignment:
| Q |
29 |
gagagtaaccaagtctctgcttgaatctgtcacttctagaacttgggagagcaataatcttgattttcttcgagttgaattaaagaaaagctcgaaggag |
128 |
Q |
| |
|
|||||||||||| ||||| |||||| ||||||||| ||| ||| | | |||||| |||||| |||||||||||||||| ||||||| | ||| | |
|
|
| T |
29836732 |
gagagtaaccaaatctctccttgaagttgtcacttcaagagaatggaataccaataaccttgatcttcttcgagttgaattgaagaaaaatttgaacaac |
29836831 |
T |
|
| Q |
129 |
aaaagatttttgtttgtgctggatgatctgtggaatga |
166 |
Q |
| |
|
|||||||||||| |||| |||||||| | |||||||| |
|
|
| T |
29836832 |
aaaagatttttgattgtattggatgatgtttggaatga |
29836869 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0083 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0083
Description:
Target: scaffold0083; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 303 - 361
Target Start/End: Complemental strand, 58126 - 58068
Alignment:
| Q |
303 |
tcaaatgatgattgttggtctttactctcaaagcatgcaatgtgaagttaggagtttca |
361 |
Q |
| |
|
|||||||| ||||||||||||||||||||||| ||||| || ||||| | |||||||| |
|
|
| T |
58126 |
tcaaatgaagattgttggtctttactctcaaactatgcattgggaagtgatgagtttca |
58068 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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