View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14636_high_2 (Length: 456)
Name: NF14636_high_2
Description: NF14636
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14636_high_2 |
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Alignment Details
Target: chr8 (Bit Score: 183; Significance: 8e-99; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 15 - 356
Target Start/End: Original strand, 18645365 - 18645710
Alignment:
| Q |
15 |
aattgcttccgcattggccacatttgctacaaaatcaaggagcgtgtttcagtcgtgttattggtgacacattgataacaatcgcgcccgcaattatggt |
114 |
Q |
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| T |
18645365 |
aattgcttccgcattggccacatttgctacaaaatcaaggagcgtttttcagtcgtgttattggtggcacattggtatcaatcgcgcccgcaattatggt |
18645464 |
T |
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| Q |
115 |
gataaaa----caatctaactcggtaagacttcctggaaaaagtcatgtttcggtcatagtatccatgtcattatagcctgcaagtagcctctcctgttg |
210 |
Q |
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| T |
18645465 |
gacaaaataaacaatctacctcggtaagacttcctggaaaaagtcctgtttcagtcatagtatccatgtcattatagccctcaaggagcttctcctgttg |
18645564 |
T |
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| Q |
211 |
tttatagtattctgcaatcttgcgctgcttctctgaaatcaaacacagccnnnnnnnnnnnnnnnnnnnnnnccacttcacaaagacaatattgaattaa |
310 |
Q |
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| T |
18645565 |
tttatagtattctgctaccttgcgttgcttctctgaaatcaaacacaaccaaaaaaactctcaaaaagaaaatcacttcacaaagacaatattgaattaa |
18645664 |
T |
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| Q |
311 |
agtaaagcatatagtaaataaaacagttgaataacaatctcatata |
356 |
Q |
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| T |
18645665 |
agtaaagcatataataaataacactgttgaataacaatctcatata |
18645710 |
T |
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