View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14636_high_7 (Length: 239)
Name: NF14636_high_7
Description: NF14636
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14636_high_7 |
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Alignment Details
Target: chr3 (Bit Score: 183; Significance: 4e-99; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 18 - 224
Target Start/End: Complemental strand, 44432435 - 44432224
Alignment:
| Q |
18 |
gttttgttgttgtcttcttcattttctaatctctttcgcgcgctcttaatttgtcttttcttact----taccaaatgtatgtatcaatgaacctgta-c |
112 |
Q |
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| T |
44432435 |
gttttgttgttgtcttcttcattttctaatctctttcgcgcgctcttaatttgtcttttcttactctaccaccaaatgtatgtatcaatgaacctgtacc |
44432336 |
T |
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| Q |
113 |
cactatacaattgatttgaatatactatactacgccctaccccacatatctctattatacaattcattcacaacacaacaggtttgttagttagttaggg |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44432335 |
cactatacaattgatttgaatatactatactacgccctaccccacatatctctattatacaattcattcacaacacaacaggtttgttagttagttaggg |
44432236 |
T |
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| Q |
213 |
ttctacattcat |
224 |
Q |
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|||||||||||| |
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| T |
44432235 |
ttctacattcat |
44432224 |
T |
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