View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14636_low_7 (Length: 293)

Name: NF14636_low_7
Description: NF14636
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14636_low_7
NF14636_low_7
[»] scaffold0038 (4 HSPs)
scaffold0038 (19-277)||(27289-27547)
scaffold0038 (19-277)||(34566-34824)
scaffold0038 (43-277)||(42831-43065)
scaffold0038 (18-275)||(116636-116893)
[»] chr6 (52 HSPs)
chr6 (19-277)||(28226791-28227049)
chr6 (19-277)||(28234405-28234663)
chr6 (43-277)||(28242669-28242903)
chr6 (18-275)||(28325321-28325578)
chr6 (19-277)||(28185207-28185465)
chr6 (19-277)||(28180955-28181213)
chr6 (21-277)||(28297801-28298057)
chr6 (21-277)||(28514016-28514272)
chr6 (41-275)||(27611092-27611326)
chr6 (43-275)||(27724935-27725167)
chr6 (76-275)||(27593110-27593309)
chr6 (43-277)||(26884028-26884262)
chr6 (43-275)||(27604795-27605027)
chr6 (43-275)||(27718469-27718701)
chr6 (76-277)||(27678844-27679045)
chr6 (52-277)||(27698582-27698807)
chr6 (43-260)||(28786143-28786360)
chr6 (43-260)||(28792264-28792481)
chr6 (43-273)||(26893563-26893793)
chr6 (55-272)||(26802319-26802536)
chr6 (43-141)||(28098593-28098691)
chr6 (88-277)||(27677702-27677891)
chr6 (73-266)||(28781034-28781227)
chr6 (193-277)||(27706490-27706574)
chr6 (43-245)||(27229097-27229299)
chr6 (76-242)||(31284186-31284352)
chr6 (73-245)||(25579614-25579786)
chr6 (43-275)||(26342024-26342256)
chr6 (73-277)||(26622871-26623075)
chr6 (73-277)||(26728849-26729053)
chr6 (94-273)||(26646395-26646574)
chr6 (94-273)||(26752363-26752542)
chr6 (44-275)||(28139407-28139638)
chr6 (61-275)||(29825910-29826124)
chr6 (43-277)||(26936959-26937193)
chr6 (43-162)||(26861481-26861600)
chr6 (154-277)||(28149914-28150036)
chr6 (193-245)||(26142880-26142932)
chr6 (73-245)||(26655884-26656056)
chr6 (73-245)||(26761855-26762027)
chr6 (217-277)||(26823879-26823939)
chr6 (73-245)||(27338185-27338357)
chr6 (73-245)||(27398925-27399097)
chr6 (60-277)||(2184170-2184387)
chr6 (193-245)||(25481757-25481809)
chr6 (97-245)||(27531317-27531465)
chr6 (61-180)||(25071542-25071661)
chr6 (61-139)||(26974935-26975013)
chr6 (193-245)||(25538555-25538607)
chr6 (61-141)||(27214300-27214380)
chr6 (61-141)||(27234848-27234928)
chr6 (214-274)||(28098460-28098520)
[»] scaffold0019 (1 HSPs)
scaffold0019 (19-277)||(58370-58628)
[»] scaffold0349 (2 HSPs)
scaffold0349 (43-277)||(3509-3744)
scaffold0349 (52-266)||(14454-14668)
[»] chr2 (1 HSPs)
chr2 (45-273)||(3279555-3279783)
[»] chr8 (2 HSPs)
chr8 (55-237)||(31903728-31903910)
chr8 (219-277)||(29273858-29273916)
[»] chr4 (6 HSPs)
chr4 (43-237)||(5091082-5091276)
chr4 (43-277)||(18655552-18655786)
chr4 (43-277)||(18724160-18724394)
chr4 (43-277)||(18731579-18731813)
chr4 (217-277)||(18679642-18679702)
chr4 (217-277)||(18699475-18699535)
[»] scaffold1254 (1 HSPs)
scaffold1254 (73-260)||(22-209)
[»] scaffold0419 (1 HSPs)
scaffold0419 (73-260)||(7420-7607)
[»] scaffold0277 (2 HSPs)
scaffold0277 (43-258)||(4778-4993)
scaffold0277 (73-260)||(13737-13924)
[»] chr1 (3 HSPs)
chr1 (217-277)||(268432-268492)
chr1 (194-277)||(28127754-28127837)
chr1 (214-277)||(28164437-28164500)
[»] scaffold0781 (1 HSPs)
scaffold0781 (60-125)||(91-156)


Alignment Details
Target: scaffold0038 (Bit Score: 183; Significance: 5e-99; HSPs: 4)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 19 - 277
Target Start/End: Original strand, 27289 - 27547
Alignment:
Q  19 cttcaatcatccgtctcctccccttcttccttctcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgctatggttttaccg 118  Q
    |||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |    
T  27289 cttcaatcatccgtctctcccccttcttccttctcttatggattcacctatgacgtgttccttagttttagaggtattgacactcgttatggttttactg 27388  T
Q  119 gaaatctctacaaagatctttgtaagaagggcattcacaccttctttgatgacagagagcttccaggaggttacgaaataacaccatcactttttaaggc 218  Q
    ||||||||||||  ||||||||||||||||| |||||||| ||||||||||| |||||||||| ||||||| | ||||||||| |||||||||| ||||     
T  27389 gaaatctctacagtgatctttgtaagaagggaattcacacattctttgatgatagagagcttcaaggaggtgatgaaataacatcatcacttttcaaggt 27488  T
Q  219 cattgaagagtctaggatttttattcctgtcttgtctatcaattatgcttcttcttcat 277  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  27489 cattgaagaatctaggattttcattcctgtcttgtctatcaattatgcttcttcttcat 27547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 19 - 277
Target Start/End: Original strand, 34566 - 34824
Alignment:
Q  19 cttcaatcatccgtctcctccccttcttccttctcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgctatggttttaccg 118  Q
    ||||||||||||||| || || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34566 cttcaatcatccgtccccccctcttcttctttctcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgctatggttttaccg 34665  T
Q  119 gaaatctctacaaagatctttgtaagaagggcattcacaccttctttgatgacagagagcttccaggaggttacgaaataacaccatcactttttaaggc 218  Q
     ||||||||| | || ||||||| | ||||| || ||||||||| |||||||||| ||||||| ||||||  | |||||||||||||||||||| |||||    
T  34666 aaaatctctatagagctctttgtcacaagggaatccacaccttcattgatgacagggagcttcaaggaggagatgaaataacaccatcacttttcaaggc 34765  T
Q  219 cattgaagagtctaggatttttattcctgtcttgtctatcaattatgcttcttcttcat 277  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  34766 cattgaagagtctaggattttcattcctgtcttgtctatcaattatgcttcttcttcat 34824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #3
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 43 - 277
Target Start/End: Original strand, 42831 - 43065
Alignment:
Q  43 tcttccttctcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgctatggttttaccggaaatctctacaaagatctttgta 142  Q
    |||||| |||||||||| || |||||||| || ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  42831 tcttccctctcctatgggtttacctatgatgtcttccttagttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatctttgta 42930  T
Q  143 agaagggcattcacaccttctttgatgacagagagcttccaggaggttacgaaataacaccatcactttttaaggccattgaagagtctaggatttttat 242  Q
    ||||||| |||| ||||||| ||||||||||||| |||||||||||| || ||||||||||||||||||| |||||||||||||||||||||||||| ||    
T  42931 agaagggaattcgcaccttcattgatgacagagaacttccaggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcat 43030  T
Q  243 tcctgtcttgtctatcaattatgcttcttcttcat 277  Q
    |||||||||||||||||||||||||||||||||||    
T  43031 tcctgtcttgtctatcaattatgcttcttcttcat 43065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #4
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 18 - 275
Target Start/End: Original strand, 116636 - 116893
Alignment:
Q  18 acttcaatcatccgtctcctccccttcttccttctcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgctatggttttacc 117  Q
    ||||||||||||| |||| ||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||     
T  116636 acttcaatcatccatctcttcctcctcttccttttcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgttatggttttact 116735  T
Q  118 ggaaatctctacaaagatctttgtaagaagggcattcacaccttctttgatgacagagagcttccaggaggttacgaaataacaccatcactttttaagg 217  Q
    ||||||||||||||||||||||||| |||| | ||||  |||||| ||||||||| ||| |||| | ||||| ||||||||||||| |||||||| ||||    
T  116736 ggaaatctctacaaagatctttgtaggaagagaattcgtaccttcattgatgacaaagaccttcaacgaggtgacgaaataacaccgtcacttttcaagg 116835  T
Q  218 ccattgaagagtctaggatttttattcctgtcttgtctatcaattatgcttcttcttc 275  Q
    |||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||    
T  116836 ccattgaagagtctaggattttcattcctattttgtctatcaattatgcttcttcttc 116893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 183; Significance: 5e-99; HSPs: 52)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 19 - 277
Target Start/End: Original strand, 28226791 - 28227049
Alignment:
Q  19 cttcaatcatccgtctcctccccttcttccttctcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgctatggttttaccg 118  Q
    |||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |    
T  28226791 cttcaatcatccgtctctcccccttcttccttctcttatggattcacctatgacgtgttccttagttttagaggtattgacactcgttatggttttactg 28226890  T
Q  119 gaaatctctacaaagatctttgtaagaagggcattcacaccttctttgatgacagagagcttccaggaggttacgaaataacaccatcactttttaaggc 218  Q
    ||||||||||||  ||||||||||||||||| |||||||| ||||||||||| |||||||||| ||||||| | ||||||||| |||||||||| ||||     
T  28226891 gaaatctctacagtgatctttgtaagaagggaattcacacattctttgatgatagagagcttcaaggaggtgatgaaataacatcatcacttttcaaggt 28226990  T
Q  219 cattgaagagtctaggatttttattcctgtcttgtctatcaattatgcttcttcttcat 277  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  28226991 cattgaagaatctaggattttcattcctgtcttgtctatcaattatgcttcttcttcat 28227049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 19 - 277
Target Start/End: Original strand, 28234405 - 28234663
Alignment:
Q  19 cttcaatcatccgtctcctccccttcttccttctcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgctatggttttaccg 118  Q
    ||||||||||||||| || || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28234405 cttcaatcatccgtccccccctcttcttctttctcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgctatggttttaccg 28234504  T
Q  119 gaaatctctacaaagatctttgtaagaagggcattcacaccttctttgatgacagagagcttccaggaggttacgaaataacaccatcactttttaaggc 218  Q
     ||||||||| | || ||||||| | ||||| || ||||||||| |||||||||| ||||||| ||||||  | |||||||||||||||||||| |||||    
T  28234505 aaaatctctatagagctctttgtcacaagggaatccacaccttcattgatgacagggagcttcaaggaggagatgaaataacaccatcacttttcaaggc 28234604  T
Q  219 cattgaagagtctaggatttttattcctgtcttgtctatcaattatgcttcttcttcat 277  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  28234605 cattgaagagtctaggattttcattcctgtcttgtctatcaattatgcttcttcttcat 28234663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 43 - 277
Target Start/End: Original strand, 28242669 - 28242903
Alignment:
Q  43 tcttccttctcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgctatggttttaccggaaatctctacaaagatctttgta 142  Q
    |||||| |||||||||| || |||||||| || ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  28242669 tcttccctctcctatgggtttacctatgatgtcttccttagttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatctttgta 28242768  T
Q  143 agaagggcattcacaccttctttgatgacagagagcttccaggaggttacgaaataacaccatcactttttaaggccattgaagagtctaggatttttat 242  Q
    ||||||| |||| ||||||| ||||||||||||| |||||||||||| || ||||||||||||||||||| |||||||||||||||||||||||||| ||    
T  28242769 agaagggaattcgcaccttcattgatgacagagaacttccaggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcat 28242868  T
Q  243 tcctgtcttgtctatcaattatgcttcttcttcat 277  Q
    |||||||||||||||||||||||||||||||||||    
T  28242869 tcctgtcttgtctatcaattatgcttcttcttcat 28242903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 18 - 275
Target Start/End: Original strand, 28325321 - 28325578
Alignment:
Q  18 acttcaatcatccgtctcctccccttcttccttctcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgctatggttttacc 117  Q
    ||||||||||||| |||| ||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||     
T  28325321 acttcaatcatccatctcttcctcctcttccttttcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgttatggttttact 28325420  T
Q  118 ggaaatctctacaaagatctttgtaagaagggcattcacaccttctttgatgacagagagcttccaggaggttacgaaataacaccatcactttttaagg 217  Q
    ||||||||||||||||||||||||| |||| | ||||  |||||| ||||||||| ||| |||| | ||||| ||||||||||||| |||||||| ||||    
T  28325421 ggaaatctctacaaagatctttgtaggaagagaattcgtaccttcattgatgacaaagaccttcaacgaggtgacgaaataacaccgtcacttttcaagg 28325520  T
Q  218 ccattgaagagtctaggatttttattcctgtcttgtctatcaattatgcttcttcttc 275  Q
    |||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||    
T  28325521 ccattgaagagtctaggattttcattcctattttgtctatcaattatgcttcttcttc 28325578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 19 - 277
Target Start/End: Original strand, 28185207 - 28185465
Alignment:
Q  19 cttcaatcatccgtctcctccccttcttccttctcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgctatggttttaccg 118  Q
    ||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||| |    
T  28185207 cttcaatcatccgtctcctcatcctcttccttctcctatggattcacctatgacgtgttccttagctttagaggtagtgacactcgttatcgttttactg 28185306  T
Q  119 gaaatctctacaaagatctttgtaagaagggcattcacaccttctttgatgacagagagcttccaggaggttacgaaataacaccatcactttttaaggc 218  Q
    |||||||| | | || ||||||| | ||||| || |  |||||| | |||||||||||||||| ||||||| | ||||||||| |||||||||| |||||    
T  28185307 gaaatctcaatagagctctttgtgacaagggaatccgaaccttcatggatgacagagagcttcaaggaggtgaagaaataacatcatcacttttcaaggc 28185406  T
Q  219 cattgaagagtctaggatttttattcctgtcttgtctatcaattatgcttcttcttcat 277  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  28185407 cattgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttcttcat 28185465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 19 - 277
Target Start/End: Original strand, 28180955 - 28181213
Alignment:
Q  19 cttcaatcatccgtctcctccccttcttccttctcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgctatggttttaccg 118  Q
    ||||||||||||||||||||  | ||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||| |    
T  28180955 cttcaatcatccgtctcctcatcctcttccttctcctatggattcacctatgacgcgttccttagctttagaggtggtgacactcgttatggttttactg 28181054  T
Q  119 gaaatctctacaaagatctttgtaagaagggcattcacaccttctttgatgacagagagcttccaggaggttacgaaataacaccatcactttttaaggc 218  Q
    |||||||| | | || ||||||| | ||||| || |  |||||| | |||||||||||||||| ||||||| | ||||||||| |||||||||| |||||    
T  28181055 gaaatctcaatagagctctttgtgacaagggaatccgaaccttcatggatgacagagagcttcaaggaggtgaagaaataacatcatcacttttcaaggc 28181154  T
Q  219 cattgaagagtctaggatttttattcctgtcttgtctatcaattatgcttcttcttcat 277  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  28181155 cattgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttcttcat 28181213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 21 - 277
Target Start/End: Complemental strand, 28298057 - 28297801
Alignment:
Q  21 tcaatcatccgtctcctccccttcttccttctcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgctatggttttaccgga 120  Q
    |||||||||| |||| ||| | |||||||||||||||||||||||  ||||||| ||||| |||||||||||||||||||| |||||  ||||||  |||    
T  28298057 tcaatcatccatctcttcctcctcttccttctcctatggattcactcatgacgttttcctaagttttagaggtagtgacacacgctacagttttattgga 28297958  T
Q  121 aatctctacaaagatctttgtaagaagggcattcacaccttctttgatgacagagagcttccaggaggttacgaaataacaccatcactttttaaggcca 220  Q
    |||||| ||||||||||||||| |||||| |||| ||||||| |||||||||||||||||  ||||||| |||||||||||||||||||||| |||  ||    
T  28297957 aatctccacaaagatctttgtaggaagggaattcgcaccttcattgatgacagagagcttaaaggaggtgacgaaataacaccatcacttttcaagcaca 28297858  T
Q  221 ttgaagagtctaggatttttattcctgtcttgtctatcaattatgcttcttcttcat 277  Q
    |||||||| |||||||||| ||||||||||| |||| ||||||||||||||||||||    
T  28297857 ttgaagagactaggattttcattcctgtcttatctaccaattatgcttcttcttcat 28297801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 21 - 277
Target Start/End: Original strand, 28514016 - 28514272
Alignment:
Q  21 tcaatcatccgtctcctccccttcttccttctcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgctatggttttaccgga 120  Q
    |||||||||| |||| ||| | |||||||||||||||||||||||  ||||||| ||||| |||||||||||||||||||| |||||  ||||||  |||    
T  28514016 tcaatcatccatctcttcctcctcttccttctcctatggattcactcatgacgttttcctaagttttagaggtagtgacacacgctacagttttattgga 28514115  T
Q  121 aatctctacaaagatctttgtaagaagggcattcacaccttctttgatgacagagagcttccaggaggttacgaaataacaccatcactttttaaggcca 220  Q
    |||||| ||||||||||||||| |||||| |||| ||||||| |||||||||||||||||  ||||||| |||||||||||||||||||||| |||  ||    
T  28514116 aatctccacaaagatctttgtaggaagggaattcgcaccttcattgatgacagagagcttaaaggaggtgacgaaataacaccatcacttttcaagcaca 28514215  T
Q  221 ttgaagagtctaggatttttattcctgtcttgtctatcaattatgcttcttcttcat 277  Q
    |||||||| |||||||||| ||||||||||| |||| ||||||||||||||||||||    
T  28514216 ttgaagagactaggattttcattcctgtcttatctaccaattatgcttcttcttcat 28514272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 41 - 275
Target Start/End: Complemental strand, 27611326 - 27611092
Alignment:
Q  41 cttcttccttctcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgctatggttttaccggaaatctctacaaagatctttg 140  Q
    ||||||| || |||||||||||||| ||  | |||||||| |||||||| || | |||||||||| | ||||||||||||||||||||||| | ||||      
T  27611326 cttcttcattttcctatggattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggaaatctctacaaggctcttac 27611227  T
Q  141 taagaagggcattcacaccttctttgatgacagagagcttccaggaggttacgaaataacaccatcactttttaaggccattgaagagtctaggattttt 240  Q
    | | ||||| || || |||||| |||||||||  || |||||| ||||  | ||||| |||||||||||  | ||||||||||| || ||||||||||||    
T  27611226 tgacaagggaatccataccttcattgatgacaatgatcttccaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggattttt 27611127  T
Q  241 attcctgtcttgtctatcaattatgcttcttcttc 275  Q
    |||||||| || |||||||| ||||| ||||||||    
T  27611126 attcctgtgttttctatcaactatgcctcttcttc 27611092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 43 - 275
Target Start/End: Complemental strand, 27725167 - 27724935
Alignment:
Q  43 tcttccttctcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgctatggttttaccggaaatctctacaaagatctttgta 142  Q
    ||||| || |||||||||||||| ||  | ||||||||||||||||| || | |||||||||  | ||||||||||||||||||||||| | ||||  |     
T  27725167 tcttcattttcctatggattcacttaccaagtgttccttagttttaggggcactgacactcggcacggttttaccggaaatctctacaaggctcttactg 27725068  T
Q  143 agaagggcattcacaccttctttgatgacagagagcttccaggaggttacgaaataacaccatcactttttaaggccattgaagagtctaggatttttat 242  Q
    | ||||| || || |||||| |||||||||  || |||| | ||||  | ||||| |||||||||||  | ||||||||||| || ||||||||||||||    
T  27725067 acaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttat 27724968  T
Q  243 tcctgtcttgtctatcaattatgcttcttcttc 275  Q
    |||||| || |||||||| ||||| | ||||||    
T  27724967 tcctgtgttttctatcaactatgcctattcttc 27724935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 76 - 275
Target Start/End: Complemental strand, 27593309 - 27593110
Alignment:
Q  76 ttccttagttttagaggtagtgacactcgctatggttttaccggaaatctctacaaagatctttgtaagaagggcattcacaccttctttgatgacagag 175  Q
    ||||| ||||| ||||| ||||||||||| || ||||| ||||| ||||||||||| | ||||  | | ||||| ||  |||||||| |||||||||  |    
T  27593309 ttcctcagtttcagaggaagtgacactcggtacggtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatg 27593210  T
Q  176 agcttccaggaggttacgaaataacaccatcactttttaaggccattgaagagtctaggatttttattcctgtcttgtctatcaattatgcttcttcttc 275  Q
      |||| | ||||  | ||||| |||||||||||| | ||||||||||||||||||||||||||||||||||| || |||||||| ||||| ||||||||    
T  27593209 gtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttc 27593110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 43 - 277
Target Start/End: Original strand, 26884028 - 26884262
Alignment:
Q  43 tcttccttctcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgctatggttttaccggaaatctctacaaagatctttgta 142  Q
    ||||| || |||||||||||||| ||  | |||||||| ||||| ||||| ||||||||||| |||||||| || |||||||||||||| | ||||  ||    
T  26884028 tcttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctcttacta 26884127  T
Q  143 agaagggcattcacaccttctttgatgacagagagcttccaggaggttacgaaataacaccatcactttttaaggccattgaagagtctaggatttttat 242  Q
    | ||||| || ||||||||| ||||||| |   | |||||| ||||   |||||| |||||||||||  | |||||||||||||| ||||| ||||||||    
T  26884128 acaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttat 26884227  T
Q  243 tcctgtcttgtctatcaattatgcttcttcttcat 277  Q
    |||  | || |||| ||| ||||| ||||||||||    
T  26884228 tccaatattttctaccaactatgcatcttcttcat 26884262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 43 - 275
Target Start/End: Complemental strand, 27605027 - 27604795
Alignment:
Q  43 tcttccttctcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgctatggttttaccggaaatctctacaaagatctttgta 142  Q
    ||||| || ||||||| |||||| ||  | ||||||||||||||||| || | ||||||||| || ||||||||||| ||||||||||| | ||||  |     
T  27605027 tcttcattttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaaggctcttactg 27604928  T
Q  143 agaagggcattcacaccttctttgatgacagagagcttccaggaggttacgaaataacaccatcactttttaaggccattgaagagtctaggatttttat 242  Q
    | ||||| ||||| |||||| ||||||| |  || |||| | ||||  | ||||| |||||| ||||| | ||||||||||| || || |||||||||||    
T  27604927 acaagggaattcataccttcattgatgaaaatgatcttcgaagaggagatgaaatcacaccagcacttctcaaggccattgatgaatccaggatttttat 27604828  T
Q  243 tcctgtcttgtctatcaattatgcttcttcttc 275  Q
    |||||| || |||||||| ||||| ||||||||    
T  27604827 tcctgtgttttctatcaaatatgcctcttcttc 27604795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 43 - 275
Target Start/End: Complemental strand, 27718701 - 27718469
Alignment:
Q  43 tcttccttctcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgctatggttttaccggaaatctctacaaagatctttgta 142  Q
    ||||| |||||| |||||||||| ||  | |||||||| |||||||| || | |||||||||  |  |||||||||||||||||||||| | ||||  |     
T  27718701 tcttcattctcccatggattcacttaccaagtgttcctcagttttaggggcactgacactcggcacagttttaccggaaatctctacaaggctcttactg 27718602  T
Q  143 agaagggcattcacaccttctttgatgacagagagcttccaggaggttacgaaataacaccatcactttttaaggccattgaagagtctaggatttttat 242  Q
    | ||||| || || |||||| |||||||||  || |||| | ||||  | ||||| |||||||||||  | ||||||||||| || ||||||||||||||    
T  27718601 acaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttat 27718502  T
Q  243 tcctgtcttgtctatcaattatgcttcttcttc 275  Q
    |||||| || |||||||| ||||| ||||||||    
T  27718501 tcctgtgttttctatcaactatgcctcttcttc 27718469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 76 - 277
Target Start/End: Original strand, 27678844 - 27679045
Alignment:
Q  76 ttccttagttttagaggtagtgacactcgctatggttttaccggaaatctctacaaagatctttgtaagaagggcattcacaccttctttgatgacagag 175  Q
    ||||| ||||| ||||| ||||||||||| || ||||| ||||| ||||||||||| | ||||  | | ||||| ||  |||||||| ||||| | |  |    
T  27678844 ttcctcagtttcagaggaagtgacactcggtacggtttcaccgggaatctctacaaggctcttactgacaagggaatcaacaccttcattgataagaatg 27678943  T
Q  176 agcttccaggaggttacgaaataacaccatcactttttaaggccattgaagagtctaggatttttattcctgtcttgtctatcaattatgcttcttcttc 275  Q
      |||| | ||||  | ||||| |||||||||||| | ||||||||||||||||||||||||||||||||||| || |||||||| ||||| ||||||||    
T  27678944 gtcttcaaagaggagatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttc 27679043  T
Q  276 at 277  Q
    ||    
T  27679044 at 27679045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 52 - 277
Target Start/End: Complemental strand, 27698807 - 27698582
Alignment:
Q  52 tcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgctatggttttaccggaaatctctacaaagatctttgtaagaagggca 151  Q
    |||||||||||||| ||  | |||||| | |||||||| || | |||||||||  | ||||||||||||||||||||||| | ||||  | | ||||| |    
T  27698807 tcctatggattcacttaccaagtgttcatcagttttaggggcactgacactcggcacggttttaccggaaatctctacaaggctcttactgacaagggaa 27698708  T
Q  152 ttcacaccttctttgatgacagagagcttccaggaggttacgaaataacaccatcactttttaaggccattgaagagtctaggatttttattcctgtctt 251  Q
    | || |||||| |||||||||  || |||| | ||||  | ||||| |||||||||||  | ||||||||||| || |||||||||||||||||||| ||    
T  27698707 tccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgtt 27698608  T
Q  252 gtctatcaattatgcttcttcttcat 277  Q
     ||| |||| ||||| ||||||||||    
T  27698607 ttctctcaactatgcatcttcttcat 27698582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 43 - 260
Target Start/End: Original strand, 28786143 - 28786360
Alignment:
Q  43 tcttccttctcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgctatggttttaccggaaatctctacaaagatctttgta 142  Q
    ||||| || |||||||||||||| ||  | |||||||| |||||||| || | |||||||||| | ||||||||||||||||||||||| | ||||  |     
T  28786143 tcttcattttcctatggattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggaaatctctacaaggctcttactg 28786242  T
Q  143 agaagggcattcacaccttctttgatgacagagagcttccaggaggttacgaaataacaccatcactttttaaggccattgaagagtctaggatttttat 242  Q
    | ||||| ||  | |||||| |||||||||  || |||| | ||||  | ||||| |||||||||||  | |||||||| ||||| ||||||||||||||    
T  28786243 acaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttat 28786342  T
Q  243 tcctgtcttgtctatcaa 260  Q
    |||||| || ||||||||    
T  28786343 tcctgtgttttctatcaa 28786360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 43 - 260
Target Start/End: Original strand, 28792264 - 28792481
Alignment:
Q  43 tcttccttctcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgctatggttttaccggaaatctctacaaagatctttgta 142  Q
    ||||| || |||||||||||||| ||  | |||||||| |||||||| || | |||||||||| | ||||||||||||||||||||||| | ||||  |     
T  28792264 tcttcattttcctatggattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggaaatctctacaaggctcttactg 28792363  T
Q  143 agaagggcattcacaccttctttgatgacagagagcttccaggaggttacgaaataacaccatcactttttaaggccattgaagagtctaggatttttat 242  Q
    | ||||| ||  | |||||| |||||||||  || |||| | ||||  | ||||| |||||||||||  | |||||||| ||||| ||||||||||||||    
T  28792364 acaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttat 28792463  T
Q  243 tcctgtcttgtctatcaa 260  Q
    |||||| || ||||||||    
T  28792464 tcctgtgttttctatcaa 28792481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 43 - 273
Target Start/End: Complemental strand, 26893793 - 26893563
Alignment:
Q  43 tcttccttctcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgctatggttttaccggaaatctctacaaagatctttgta 142  Q
    ||||||| ||| |||||||||||||| || || ||||| | |||||||||   ||||||||| | ||||||||| ||  |||| || |||| |||||||     
T  26893793 tcttcctcctcgtatggattcacctacgatgtcttcctcaattttagaggctctgacactcgttttggttttacgggtcatctttataaagctctttgtg 26893694  T
Q  143 agaagggcattcacaccttctttgatgacagagagcttccaggaggttacgaaataacaccatcactttttaaggccattgaagagtctaggatttttat 242  Q
    | |  || |||||||||||| ||||||| | ||||||||   ||||| |||||||  ||||||||||| | ||||| ||||||||||||| ||| |  ||    
T  26893693 atagtggaattcacaccttcattgatgatacagagcttcatagaggtgacgaaatctcaccatcacttatcaaggcaattgaagagtctatgatatacat 26893594  T
Q  243 tcctgtcttgtctatcaattatgcttcttct 273  Q
    ||| ||| | |||||||| ||||||||||||    
T  26893593 tccagtcctctctatcaactatgcttcttct 26893563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 55 - 272
Target Start/End: Original strand, 26802319 - 26802536
Alignment:
Q  55 tatggattcacctatgacgtgttccttagttttagaggtagtgacactcgctatggttttaccggaaatctctacaaagatctttgtaagaagggcattc 154  Q
    ||||||||||| ||  | |||||||| |||||||| || | ||||||||| || |||||||| || ||||||||||| | ||||  | | ||||| || |    
T  26802319 tatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatcc 26802418  T
Q  155 acaccttctttgatgacagagagcttccaggaggttacgaaataacaccatcactttttaaggccattgaagagtctaggatttttattcctgtcttgtc 254  Q
    | |||||| |||||||||  || |||| | ||||  | ||||| |||||||||||  | |||||||||||||| ||||| |||||||||||||| || ||    
T  26802419 ataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgttttc 26802518  T
Q  255 tatcaattatgcttcttc 272  Q
    |||||| ||||| |||||    
T  26802519 tatcaactatgcctcttc 26802536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 43 - 141
Target Start/End: Complemental strand, 28098691 - 28098593
Alignment:
Q  43 tcttccttctcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgctatggttttaccggaaatctctacaaagatctttgt 141  Q
    ||||| ||||| ||||||||||||||||||||||| |||| |||||| || |  |||||||| ||||||||||| |||||||||||||||| |||||||    
T  28098691 tcttcattctcttatggattcacctatgacgtgtttcttaattttaggggcaccgacactcggtatggttttactggaaatctctacaaagctctttgt 28098593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 88 - 277
Target Start/End: Complemental strand, 27677891 - 27677702
Alignment:
Q  88 agaggtagtgacactcgctatggttttaccggaaatctctacaaagatctttgtaagaagggcattcacaccttctttgatgacagagagcttccaggag 187  Q
    ||||| ||||||||||| || ||||| ||||| ||||||||||| | ||||  | | ||||| || ||||||||| ||||  |    || |||| | |||    
T  27677891 agaggaagtgacactcggtacggtttcaccggcaatctctacaaggctcttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagag 27677792  T
Q  188 gttacgaaataacaccatcactttttaaggccattgaagagtctaggatttttattcctgtcttgtctatcaattatgcttcttcttcat 277  Q
    |  | ||||| |||||||||||| | |||||||||||||||||||||||||||||| |||| || |||||||| ||||| ||||||||||    
T  27677791 gggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattgctgtgttttctatcaactatgcctcttcttcat 27677702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 73 - 266
Target Start/End: Original strand, 28781034 - 28781227
Alignment:
Q  73 gtgttccttagttttagaggtagtgacactcgctatggttttaccggaaatctctacaaagatctttgtaagaagggcattcacaccttctttgatgaca 172  Q
    |||||||| |||||||| || | |||||||||| | ||||||||||| ||||||||||| | ||||  | | ||||| ||  | |||||| |||||||||    
T  28781034 gtgttcctcagttttaggggcactgacactcgccacggttttaccggcaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgaca 28781133  T
Q  173 gagagcttccaggaggttacgaaataacaccatcactttttaaggccattgaagagtctaggatttttattcctgtcttgtctatcaattatgc 266  Q
      || |||| | ||||  | ||||| |||||||||||  | |||||||| ||||| |||||||||||||||||||| || |||||||| |||||    
T  28781134 atgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaactatgc 28781227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 193 - 277
Target Start/End: Complemental strand, 27706574 - 27706490
Alignment:
Q  193 gaaataacaccatcactttttaaggccattgaagagtctaggatttttattcctgtcttgtctatcaattatgcttcttcttcat 277  Q
    ||||| |||||||||||| | ||||||||||||||||||||||||||||||||||| || |||||||  ||||| ||||||||||    
T  27706574 gaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcat 27706490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 43 - 245
Target Start/End: Original strand, 27229097 - 27229299
Alignment:
Q  43 tcttccttctcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgctatggttttaccggaaatctctacaaagatctttgta 142  Q
    ||||| || |||| ||||||||| ||  | ||||||||||||||||| || | |||||||||  | ||||||||||| ||||||||||| | ||||  |     
T  27229097 tcttcattttcctttggattcacttaccaagtgttccttagttttaggggcactgacactcggcacggttttaccggcaatctctacaaggctcttactg 27229196  T
Q  143 agaagggcattcacaccttctttgatgacagagagcttccaggaggttacgaaataacaccatcactttttaaggccattgaagagtctaggatttttat 242  Q
    | ||||| || || |||||| |||||||||  || |||| | ||||  ||||||| |||||||||||  | ||||||||||| || ||| ||||||||||    
T  27229197 acaagggaatccataccttcattgatgacaatgatcttcaaagaggagacgaaatcacaccatcactcgtcaaggccattgacgaatctcggatttttat 27229296  T
Q  243 tcc 245  Q
    |||    
T  27229297 tcc 27229299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 76 - 242
Target Start/End: Original strand, 31284186 - 31284352
Alignment:
Q  76 ttccttagttttagaggtagtgacactcgctatggttttaccggaaatctctacaaagatctttgtaagaagggcattcacaccttctttgatgacagag 175  Q
    ||||||||||| || || ||||||||||| |||||||| ||||| ||||||||||| | ||||  | | ||||| || ||||||||| ||||||| || |    
T  31284186 ttccttagtttcaggggaagtgacactcggtatggtttcaccggcaatctctacaaggctcttactgacaagggaatccacaccttcattgatgatagtg 31284285  T
Q  176 agcttccaggaggttacgaaataacaccatcactttttaaggccattgaagagtctaggatttttat 242  Q
    | |||| | ||||  | ||||| |||||||||||    || ||||||||||||||||||||||||||    
T  31284286 aacttcaaagaggggatgaaatcacaccatcactcgacaatgccattgaagagtctaggatttttat 31284352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 73 - 245
Target Start/End: Original strand, 25579614 - 25579786
Alignment:
Q  73 gtgttccttagttttagaggtagtgacactcgctatggttttaccggaaatctctacaaagatctttgtaagaagggcattcacaccttctttgatgaca 172  Q
    |||||||| ||||| ||||| |||||||||||| |   ||||||||| |||||||| || | ||||  | | ||||| ||||  |||||||||||||| |    
T  25579614 gtgttcctcagtttcagaggcagtgacactcgcaacacttttaccggtaatctctataaggctcttgttgacaagggaattcgtaccttctttgatgata 25579713  T
Q  173 gagagcttccaggaggttacgaaataacaccatcactttttaaggccattgaagagtctaggatttttattcc 245  Q
      || |||| | ||||  | ||||| |||||||||||| | |||||||||||||| |||||||||||||||||    
T  25579714 atgatcttcaaagaggagatgaaatcacaccatcacttgtcaaggccattgaagaatctaggatttttattcc 25579786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 43 - 275
Target Start/End: Complemental strand, 26342256 - 26342024
Alignment:
Q  43 tcttccttctcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgctatggttttaccggaaatctctacaaagatctttgta 142  Q
    ||||| ||||| ||||||||||| ||||| |||||||| | |||||| || | || |||||||||||||||||| || ||| |||| | || ||| |||     
T  26342256 tcttcattctcatatggattcacatatgatgtgttcctcaattttaggggcattggcactcgctatggttttactggcaatatctatagagctctatgtg 26342157  T
Q  143 agaagggcattcacaccttctttgatgacagagagcttccaggaggttacgaaataacaccatcactttttaaggccattgaagagtctaggatttttat 242  Q
    |    ||  | | ||||||| ||||||| || |||||||  |||||| || |||| |||| ||||||| | || |||||||||||||| |||||||| ||    
T  26342156 acggtggagtccgcaccttcattgatgatagggagcttcatggaggtgacaaaatcacacaatcacttgtcaaagccattgaagagtccaggattttcat 26342057  T
Q  243 tcctgtcttgtctatcaattatgcttcttcttc 275  Q
    |||  | || || ||||| ||||||||||||||    
T  26342056 tccaattttctcaatcaactatgcttcttcttc 26342024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 73 - 277
Target Start/End: Original strand, 26622871 - 26623075
Alignment:
Q  73 gtgttccttagttttagaggtagtgacactcgctatggttttaccggaaatctctacaaagatctttgtaagaagggcattcacaccttctttgatgaca 172  Q
    |||||||| ||||| ||||| ||||||||||| || ||||| || |||||||||||||| | ||||  | | ||||| || ||||||||| |||||||      
T  26622871 gtgttcctaagtttcagaggcagtgacactcggtacggtttcactggaaatctctacaaggctcttactgacaagggaatccacaccttcattgatgatc 26622970  T
Q  173 gagagcttccaggaggttacgaaataacaccatcactttttaaggccattgaagagtctaggatttttattcctgtcttgtctatcaattatgcttcttc 272  Q
    | || |||| | ||||  ||||||| | ||||||||||   || || || |||||||||||||||||||||||||| || |||  ||| ||||| | |||    
T  26622971 gtgaacttcaaagaggggacgaaatcaaaccatcacttgacaatgctatcgaagagtctaggatttttattcctgtgttttctcccaactatgcatattc 26623070  T
Q  273 ttcat 277  Q
    |||||    
T  26623071 ttcat 26623075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 73 - 277
Target Start/End: Original strand, 26728849 - 26729053
Alignment:
Q  73 gtgttccttagttttagaggtagtgacactcgctatggttttaccggaaatctctacaaagatctttgtaagaagggcattcacaccttctttgatgaca 172  Q
    |||||||| ||||| ||||| ||||||||||| || ||||| || |||||||||||||| | ||||  | | ||||| || ||||||||| |||||||      
T  26728849 gtgttcctaagtttcagaggcagtgacactcggtacggtttcactggaaatctctacaaggctcttactgacaagggaatccacaccttcattgatgatc 26728948  T
Q  173 gagagcttccaggaggttacgaaataacaccatcactttttaaggccattgaagagtctaggatttttattcctgtcttgtctatcaattatgcttcttc 272  Q
    | || |||| | ||||  ||||||| | ||||||||||   || || || |||||||||||||||||||||||||| || |||  ||| ||||| | |||    
T  26728949 gtgaacttcaaagaggggacgaaatcaaaccatcacttgacaatgctatcgaagagtctaggatttttattcctgtgttttctcccaactatgcatattc 26729048  T
Q  273 ttcat 277  Q
    |||||    
T  26729049 ttcat 26729053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 94 - 273
Target Start/End: Original strand, 26646395 - 26646574
Alignment:
Q  94 agtgacactcgctatggttttaccggaaatctctacaaagatctttgtaagaagggcattcacaccttctttgatgacagagagcttccaggaggttacg 193  Q
    |||||||||||  | |||||||| ||| |||||||||| | ||||  | | ||||| |||||||||||| |||||||  | || |||    ||||  | |    
T  26646395 agtgacactcgtgacggttttactggacatctctacaaggctcttactgacaagggaattcacaccttcattgatgattgtgatcttaagagaggagatg 26646494  T
Q  194 aaataacaccatcactttttaaggccattgaagagtctaggatttttattcctgtcttgtctatcaattatgcttcttct 273  Q
    |||| |||||||||||  | |||||||||||||| |||||||||||||||||||| || |||||||| ||||| ||||||    
T  26646495 aaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttct 26646574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 94 - 273
Target Start/End: Original strand, 26752363 - 26752542
Alignment:
Q  94 agtgacactcgctatggttttaccggaaatctctacaaagatctttgtaagaagggcattcacaccttctttgatgacagagagcttccaggaggttacg 193  Q
    |||||||||||  | |||||||| ||| |||||||||| | ||||  | | ||||| |||||||||||| |||||||  | || |||    ||||  | |    
T  26752363 agtgacactcgtgacggttttactggacatctctacaaggctcttactgacaagggaattcacaccttcattgatgattgtgatcttaagagaggagatg 26752462  T
Q  194 aaataacaccatcactttttaaggccattgaagagtctaggatttttattcctgtcttgtctatcaattatgcttcttct 273  Q
    |||| |||||||||||  | |||||||||||||| |||||||||||||||||||| || |||||||| ||||| ||||||    
T  26752463 aaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttct 26752542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 44 - 275
Target Start/End: Original strand, 28139407 - 28139638
Alignment:
Q  44 cttccttctcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgctatggttttaccggaaatctctacaaagatctttgtaa 143  Q
    |||| ||||||||||| ||||| || || || || || || || ||||| ||||||||||| |  ||||| || |||||||||||||||| |||| || |    
T  28139407 cttctttctcctatggcttcacatacgatgtctttctcagcttcagaggcagtgacactcgtttcggtttcactggaaatctctacaaagctcttcgtga 28139506  T
Q  144 gaagggcattcacaccttctttgatgacagagagcttccaggaggttacgaaataacaccatcactttttaaggccattgaagagtctaggatttttatt 243  Q
        || || ||||| ||  ||||||| || ||||||| ||||||| |||||||| |||| |||||  | || ||||||||||| ||||||||||| ||     
T  28139507 ctgtggaatccacacttttattgatgatagggagcttcaaggaggtgacgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatc 28139606  T
Q  244 cctgtcttgtctatcaattatgcttcttcttc 275  Q
    ||||| || || ||||| ||||| ||||||||    
T  28139607 cctgtgttttccatcaactatgcctcttcttc 28139638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 61 - 275
Target Start/End: Original strand, 29825910 - 29826124
Alignment:
Q  61 ttcacctatgacgtgttccttagttttagaggtagtgacactcgctatggttttaccggaaatctctacaaagatctttgtaagaagggcattcacacct 160  Q
    ||||||||||| || ||||| ||||| | ||||   || ||||||| |||||||||||| ||||||||||||| |||   | | |||   |||| |||||    
T  29825910 ttcacctatgatgtcttcctcagtttcacaggtgcagatactcgctttggttttaccggcaatctctacaaagctctaactgacaagaaaattcgcacct 29826009  T
Q  161 tctttgatgacagagagcttccaggaggttacgaaataacaccatcactttttaaggccattgaagagtctaggatttttattcctgtcttgtctatcaa 260  Q
    || ||||||||| |||||||| | ||||  ||||||| ||||| |||||| | ||||| ||| |||| ||||||||    |||||| | || |||| |||    
T  29826010 tcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcaattcaagaatctaggatagccattcctattttctctaccaa 29826109  T
Q  261 ttatgcttcttcttc 275  Q
    |||||||||||||||    
T  29826110 ttatgcttcttcttc 29826124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 277
Target Start/End: Original strand, 26936959 - 26937193
Alignment:
Q  43 tcttccttctcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgctatggttttaccggaaatctctacaaagatctttgta 142  Q
    ||||||||||| |||||||||||||||||||||||||| ||||| ||||| |  ||||||||||    |||||  ||  |||| ||||||| |||||||     
T  26936959 tcttccttctcttatggattcacctatgacgtgttcctcagtttcagaggcaccgacactcgcttccattttattggtcatctttacaaagctctttgtg 26937058  T
Q  143 agaagggcattcacaccttctttgatgacagagagcttccaggaggttacgaaataacaccatcactttttaaggccattgaagagtctaggatttttat 242  Q
    |    || |||| ||||||| |||||||||  ||||| |  |||||  | ||||| |||||||||||| | ||||| |||||||| ||  |||||   ||    
T  26937059 attgtggaattcgcaccttcattgatgacaaggagctccatggaggagaagaaatcacaccatcacttgtcaaggcaattgaagattccgggattgccat 26937158  T
Q  243 tcctgtcttgtctatcaattatgcttcttcttcat 277  Q
     ||||| || |||||||| |||||  |||||||||    
T  26937159 acctgtattctctatcaactatgccacttcttcat 26937193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 43 - 162
Target Start/End: Original strand, 26861481 - 26861600
Alignment:
Q  43 tcttccttctcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgctatggttttaccggaaatctctacaaagatctttgta 142  Q
    |||||| | |||||||||||||  ||  | || ||||| ||||| ||||| ||||||||||| |||||||||||||| ||||||||||| | ||||  |     
T  26861481 tcttccatttcctatggattcaaataccaggtattcctcagtttcagaggaagtgacactcggtatggttttaccggtaatctctacaaggctcttactg 26861580  T
Q  143 agaagggcattcacaccttc 162  Q
    | ||||| ||||||||||||    
T  26861581 acaagggaattcacaccttc 26861600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 154 - 277
Target Start/End: Original strand, 28149914 - 28150036
Alignment:
Q  154 cacaccttctttgatgacagagagcttccaggaggttacgaaataacaccatcactttttaaggccattgaagagtctaggatttttattcctgtcttgt 253  Q
    ||||||||| ||||||| |  ||||||  | ||||  ||||||| ||||||||||| |  ||||||||||||||||| |||||||| |||||  |||| |    
T  28149914 cacaccttcattgatgatacggagctttaacgaggggacgaaatcacaccatcactctc-aaggccattgaagagtccaggattttcattccaatcttct 28150012  T
Q  254 ctatcaattatgcttcttcttcat 277  Q
    ||||||| ||| ||||||||||||    
T  28150013 ctatcaactatacttcttcttcat 28150036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 26142880 - 26142932
Alignment:
Q  193 gaaataacaccatcactttttaaggccattgaagagtctaggatttttattcc 245  Q
    ||||| |||||||||||| | |||||||||||||| |||||||||||||||||    
T  26142880 gaaatcacaccatcacttgtcaaggccattgaagaatctaggatttttattcc 26142932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 73 - 245
Target Start/End: Original strand, 26655884 - 26656056
Alignment:
Q  73 gtgttccttagttttagaggtagtgacactcgctatggttttaccggaaatctctacaaagatctttgtaagaagggcattcacaccttctttgatgaca 172  Q
    |||||||| |||||||| || | |||||| ||  | ||||||||||| ||||||||||| | ||||  | | ||||| || || || ||| |||||||||    
T  26655884 gtgttcctcagttttaggggcattgacacccggcacggttttaccggcaatctctacaaggctcttattgataagggaatccatactttcattgatgaca 26655983  T
Q  173 gagagcttccaggaggttacgaaataacaccatcactttttaaggccattgaagagtctaggatttttattcc 245  Q
      || ||||   ||||  | ||||| |||||||||||  |||||||||||||||| || ||||||||||||||    
T  26655984 atgatcttctcagaggagatgaaatcacaccatcactcgttaaggccattgaagaatccaggatttttattcc 26656056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 73 - 245
Target Start/End: Original strand, 26761855 - 26762027
Alignment:
Q  73 gtgttccttagttttagaggtagtgacactcgctatggttttaccggaaatctctacaaagatctttgtaagaagggcattcacaccttctttgatgaca 172  Q
    |||||||| |||||||| || | |||||| ||  | ||||||||||| ||||||||||| | ||||  | | ||||| || || || ||| |||||||||    
T  26761855 gtgttcctcagttttaggggcattgacacccggcacggttttaccggcaatctctacaaggctcttattgataagggaatccatactttcattgatgaca 26761954  T
Q  173 gagagcttccaggaggttacgaaataacaccatcactttttaaggccattgaagagtctaggatttttattcc 245  Q
      || ||||   ||||  | ||||| |||||||||||  |||||||||||||||| || ||||||||||||||    
T  26761955 atgatcttctcagaggagatgaaatcacaccatcactcgttaaggccattgaagaatccaggatttttattcc 26762027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 277
Target Start/End: Original strand, 26823879 - 26823939
Alignment:
Q  217 gccattgaagagtctaggatttttattcctgtcttgtctatcaattatgcttcttcttcat 277  Q
    |||||||||||||||||||||||||||||||| || |||  ||| ||||| ||||||||||    
T  26823879 gccattgaagagtctaggatttttattcctgtgttttctgccaactatgcctcttcttcat 26823939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 73 - 245
Target Start/End: Complemental strand, 27338357 - 27338185
Alignment:
Q  73 gtgttccttagttttagaggtagtgacactcgctatggttttaccggaaatctctacaaagatctttgtaagaagggcattcacaccttctttgatgaca 172  Q
    |||||||| |||||||| |  | ||||||||  || ||||||||||| ||||||||||| | ||||  | | ||||| ||  | |||||| |||||||||    
T  27338357 gtgttcctcagttttagggacattgacactctttacggttttaccggcaatctctacaaggctcttattgacaagggaatcaaaaccttcattgatgaca 27338258  T
Q  173 gagagcttccaggaggttacgaaataacaccatcactttttaaggccattgaagagtctaggatttttattcc 245  Q
      || |||  | ||||  | ||||  |||||||||||| | |||||||||||||||||||||||||| |||||    
T  27338257 acgatcttgaaagaggagatgaaagcacaccatcacttgtcaaggccattgaagagtctaggattttgattcc 27338185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 73 - 245
Target Start/End: Complemental strand, 27399097 - 27398925
Alignment:
Q  73 gtgttccttagttttagaggtagtgacactcgctatggttttaccggaaatctctacaaagatctttgtaagaagggcattcacaccttctttgatgaca 172  Q
    |||||||| |||||||| |  | ||||||||  || ||||||||||| ||||||||||| | ||||  | | ||||| ||  | |||||| |||||||||    
T  27399097 gtgttcctcagttttagggacattgacactctttacggttttaccggcaatctctacaaggctcttattgacaagggaatcaaaaccttcattgatgaca 27398998  T
Q  173 gagagcttccaggaggttacgaaataacaccatcactttttaaggccattgaagagtctaggatttttattcc 245  Q
      || |||  | ||||  | ||||  |||||||||||| | |||||||||||||||||||||||||| |||||    
T  27398997 acgatcttgaaagaggagatgaaagcacaccatcacttgtcaaggccattgaagagtctaggattttgattcc 27398925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 277
Target Start/End: Original strand, 2184170 - 2184387
Alignment:
Q  60 attcacctatgacgtgttccttagttttagaggtagtgacactcgctatggttttaccggaaatctctacaaagatctttgtaagaagggcattcacacc 159  Q
    |||||||||| |||||||||| ||||| |||||   |||||||||| ||||||||||||| ||||| ||| | | ||| ||||| |  ||  | |||||     
T  2184170 attcacctataacgtgttcctaagtttcagaggagctgacactcgccatggttttaccggcaatctttacgatgctctatgtaaaagtggagtccacact 2184269  T
Q  160 ttctttgatgacagagagcttccaggaggttacgaaataacaccatcactttttaaggccattgaagagtctaggatttttattcctgtcttgtctatca 259  Q
    |||   ||||||   ||||||| | ||||    ||||||||| |||||||| | || |||||||||||||| || ||||| || ||||| || || |  |    
T  2184270 ttcaaggatgacgaggagcttcaacgagggggtgaaataacagcatcacttatgaaagccattgaagagtccagaattttcatccctgttttctcaaaga 2184369  T
Q  260 attatgcttcttcttcat 277  Q
    | ||||||||||||||||    
T  2184370 actatgcttcttcttcat 2184387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 25481757 - 25481809
Alignment:
Q  193 gaaataacaccatcactttttaaggccattgaagagtctaggatttttattcc 245  Q
    ||||| |||||||||||| | |||||||||||||| |||||||||| ||||||    
T  25481757 gaaatcacaccatcacttgtcaaggccattgaagaatctaggatttgtattcc 25481809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 245
Target Start/End: Complemental strand, 27531465 - 27531317
Alignment:
Q  97 gacactcgctatggttttaccggaaatctctacaaagatctttgtaagaagggcattcacaccttctttgatgacagagagcttccaggaggttacgaaa 196  Q
    ||||||||| | ||||||||||||||||||||||| | ||||  | | ||||| ||  | |||||| |||||||||  || |||| | ||||  | ||||    
T  27531465 gacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatctataccttcattgatgacaatgatcttcaaagaggagatgaaa 27531366  T
Q  197 taacaccatcactttttaaggccattgaagagtctaggatttttattcc 245  Q
    | |||||||||||    || ||||||||| | |||||||||||||||||    
T  27531365 tcacaccatcactaaaaaatgccattgaaaaatctaggatttttattcc 27531317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 61 - 180
Target Start/End: Original strand, 25071542 - 25071661
Alignment:
Q  61 ttcacctatgacgtgttccttagttttagaggtagtgacactcgctatggttttaccggaaatctctacaaagatctttgtaagaagggcattcacacct 160  Q
    |||| ||||||||||||| ||||||| || ||||  |||||||| |  ||||||||||| ||||| || |||| ||||| | | || || || |||||||    
T  25071542 ttcatctatgacgtgttcattagtttcaggggtaccgacactcgattcggttttaccggtaatctttataaagctctttctgacaaaggaatccacacct 25071641  T
Q  161 tctttgatgacagagagctt 180  Q
    |  ||||||||| |||||||    
T  25071642 ttattgatgacaaagagctt 25071661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 139
Target Start/End: Original strand, 26974935 - 26975013
Alignment:
Q  61 ttcacctatgacgtgttccttagttttagaggtagtgacactcgctatggttttaccggaaatctctacaaagatcttt 139  Q
    |||||||||||||||||| ||||||| |||||||  |||||||| |  ||||| ||||| || ||||| |||| |||||    
T  26974935 ttcacctatgacgtgttcattagtttcagaggtaccgacactcgattcggtttcaccggtaacctctataaagctcttt 26975013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 25538555 - 25538607
Alignment:
Q  193 gaaataacaccatcactttttaaggccattgaagagtctaggatttttattcc 245  Q
    ||||| |||||||||||| | |||||||| ||||| ||||| |||||||||||    
T  25538555 gaaatcacaccatcacttgtcaaggccatcgaagaatctagaatttttattcc 25538607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 141
Target Start/End: Original strand, 27214300 - 27214380
Alignment:
Q  61 ttcacctatgacgtgttccttagttttagaggtagtgacactcgctatggttttaccggaaatctctacaaagatctttgt 141  Q
    |||| ||||||||||||| ||||||| || ||||  ||||||||  | ||||| ||||| |||||||| |||| |||||||    
T  27214300 ttcagctatgacgtgttcattagtttcaggggtaccgacactcgacacggtttcaccggtaatctctataaagctctttgt 27214380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 141
Target Start/End: Complemental strand, 27234928 - 27234848
Alignment:
Q  61 ttcacctatgacgtgttccttagttttagaggtagtgacactcgctatggttttaccggaaatctctacaaagatctttgt 141  Q
    |||| ||||||||||||| ||||||| || ||||  ||||||||  | ||||| ||||| |||||||| |||| |||||||    
T  27234928 ttcagctatgacgtgttcattagtttcaggggtaccgacactcgacacggtttcaccggtaatctctataaagctctttgt 27234848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 274
Target Start/End: Complemental strand, 28098520 - 28098460
Alignment:
Q  214 aaggccattgaagagtctaggatttttattcctgtcttgtctatcaattatgcttcttctt 274  Q
    |||||||| |||||||| |||||||| ||||| ||||| ||||  || |||||||||||||    
T  28098520 aaggccatcgaagagtccaggattttaattccggtcttctctaagaactatgcttcttctt 28098460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 159; Significance: 1e-84; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 19 - 277
Target Start/End: Complemental strand, 58628 - 58370
Alignment:
Q  19 cttcaatcatccgtctcctccccttcttccttctcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgctatggttttaccg 118  Q
    |||||||||||| |||| ||| | ||||||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||| |    
T  58628 cttcaatcatccatctcttcctcctcttccttctcctatggattcacctatcacgtgttccttagctttagaggttgtgacactcgctatggttttactg 58529  T
Q  119 gaaatctctacaaagatctttgtaagaagggcattcacaccttctttgatgacagagagcttccaggaggttacgaaataacaccatcactttttaaggc 218  Q
    |||||||||||| || ||||||| | ||||| || |  |||||| | |||||||||||||||| ||||||| |||||||||||||||||||||| |||||    
T  58528 gaaatctctacagagctctttgtgacaagggaatccgaaccttcatggatgacagagagcttcaaggaggtgacgaaataacaccatcacttttcaaggc 58429  T
Q  219 cattgaagagtctaggatttttattcctgtcttgtctatcaattatgcttcttcttcat 277  Q
    |||| |||||||||||||||| ||||| |||||||||||||| ||||||||||||||||    
T  58428 cattaaagagtctaggattttcattcccgtcttgtctatcaactatgcttcttcttcat 58370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 43 - 277
Target Start/End: Complemental strand, 3744 - 3509
Alignment:
Q  43 tcttccttctcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgctatggttttaccggaaatctctacaaagatctttgta 142  Q
    ||||| || |||||||||||||| ||  | ||||||||||||||||| || | |||||||||  | ||||||||||||||||||||||| | ||||  |     
T  3744 tcttcattttcctatggattcacttaccaagtgttccttagttttaggggcactgacactcggcacggttttaccggaaatctctacaaggctcttactg 3645  T
Q  143 agaagggcattcacaccttctttgatgacagagagcttccaggaggttacgaaataacaccatcactttttaaggccattgaagagtctaggatttttat 242  Q
    | ||||| || || |||||| |||||||||  || |||| | ||||  | ||||| |||||||||||  | ||||||||||| || ||||||||||||||    
T  3644 acaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttat 3545  T
Q  243 tcctgtcttgtctatcaa-ttatgcttcttcttcat 277  Q
    |||||| || ||||||||  ||||| ||||||||||    
T  3544 tcctgtgttttctatcaacctatgcctcttcttcat 3509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 52 - 266
Target Start/End: Complemental strand, 14668 - 14454
Alignment:
Q  52 tcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgctatggttttaccggaaatctctacaaagatctttgtaagaagggca 151  Q
    |||||||||||||| ||  | |||||| | |||||||| || | |||||||||  | ||||||||||||||||||||||| | ||||  | | ||||| |    
T  14668 tcctatggattcacttaccaagtgttcatcagttttaggggcactgacactcggcacggttttaccggaaatctctacaaggctcttactgacaagggaa 14569  T
Q  152 ttcacaccttctttgatgacagagagcttccaggaggttacgaaataacaccatcactttttaaggccattgaagagtctaggatttttattcctgtctt 251  Q
    | || |||||| |||||||||  || |||| | ||||  | ||||| |||||||||||  | ||||||||||| || |||||||||||||||||||| ||    
T  14568 tccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgtt 14469  T
Q  252 gtctatcaattatgc 266  Q
     |||||||| |||||    
T  14468 ttctatcaactatgc 14454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 45 - 273
Target Start/End: Original strand, 3279555 - 3279783
Alignment:
Q  45 ttccttctcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgctatggttttaccggaaatctctacaaagatctttgtaag 144  Q
    ||||||||| |||||||||||||||||||| ||| | |||||||| || | ||||||||||||||||||||| ||||||||||  | ||| ||||    |    
T  3279555 ttccttctcttatggattcacctatgacgtattcttgagttttaggggcactgacactcgctatggttttactggaaatctct--atagagctttaagtg 3279652  T
Q  145 aagg-gcattc-acaccttctttgatgacagagagcttccaggaggttacgaaataacaccatcactttttaaggccattgaagagtctaggatttttat 242  Q
    | || | ||||  ||||||| ||||||| || |||||||  |||||| | ||||| |||| ||||||| | |||||||| |||||||| | |||||||||    
T  3279653 acggtggattctgcaccttcattgatgatagggagcttcatggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttat 3279752  T
Q  243 tcctgtcttgtctatcaattatgcttcttct 273  Q
    ||| ||||| |||||||| ||||||||||||    
T  3279753 tccggtcttctctatcaactatgcttcttct 3279783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 5e-25; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 55 - 237
Target Start/End: Original strand, 31903728 - 31903910
Alignment:
Q  55 tatggattcacctatgacgtgttccttagttttagaggtagtgacactcgctatggttttaccggaaatctctacaaagatctttgtaagaagggcattc 154  Q
    |||||||||||||| || |||||||| || ||||||||    |||||||||||||||||||| |||||||||||||||| ||||| | | ||||| || |    
T  31903728 tatggattcacctacgatgtgttcctcagctttagaggcttagacactcgctatggttttactggaaatctctacaaagctctttatgataagggaatcc 31903827  T
Q  155 acaccttctttgatgacagagagcttccaggaggttacgaaataacaccatcactttttaaggccattgaagagtctaggatt 237  Q
    |||||||  |||| ||   ||| |||| | ||||  | ||||| ||||||||||||||  |||| ||||||||||||||||||    
T  31903828 acacctttattgacgatgaagaacttcaaagaggacatgaaatcacaccatcacttttagaggcaattgaagagtctaggatt 31903910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 219 - 277
Target Start/End: Complemental strand, 29273916 - 29273858
Alignment:
Q  219 cattgaagagtctaggatttttattcctgtcttgtctatcaattatgcttcttcttcat 277  Q
    ||||||||||||||| |||||||||||||| || |||||||| ||||| ||||||||||    
T  29273916 cattgaagagtctagaatttttattcctgtgttttctatcaactatgcctcttcttcat 29273858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 5e-25; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 43 - 237
Target Start/End: Complemental strand, 5091276 - 5091082
Alignment:
Q  43 tcttccttctcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgctatggttttaccggaaatctctacaaagatctttgta 142  Q
    ||||| |||||||| ||||| ||||| ||||| || |||||||||||||| |  |||||||| || |||||||| |||||||||||  ||| |||  ||     
T  5091276 tcttctttctcctacggatttacctacgacgtctttcttagttttagaggcaccgacactcgttacggttttactggaaatctctatgaagctctacgtg 5091177  T
Q  143 agaagggcattcacaccttctttgatgacagagagcttccaggaggttacgaaataacaccatcactttttaaggccattgaagagtctaggatt 237  Q
      ||||| |||||||||||| ||||||||||||||||||   ||||  || |||||||||| |||||| | ||||||||| |||| |||| ||||    
T  5091176 tcaagggaattcacaccttcattgatgacagagagcttcagcgaggagaccaaataacaccgtcacttctcaaggccattcaagaatctaagatt 5091082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 277
Target Start/End: Complemental strand, 18655786 - 18655552
Alignment:
Q  43 tcttccttctcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgctatggttttaccggaaatctctacaaagatctttgta 142  Q
    ||||| || |||||| ||||||| ||  | |||||||| || || || || |||||||||||  | |||||||| ||  |||||||||||| ||||  |     
T  18655786 tcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactgggcatctctacaaagctcttactg 18655687  T
Q  143 agaagggcattcacaccttctttgatgacagagagcttccaggaggttacgaaataacaccatcactttttaaggccattgaagagtctaggatttttat 242  Q
    | ||||| || ||||||||| |||||||| | ||||| | | | ||  | ||||| | |||||||||    || |||||| ||||||||||||| |||||    
T  18655686 acaagggaatccacaccttcattgatgaccgtgagctgcaaagtggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatctttat 18655587  T
Q  243 tcctgtcttgtctatcaattatgcttcttcttcat 277  Q
    |||||| || |||||||| ||||| ||||||||||    
T  18655586 tcctgtgttttctatcaactatgcctcttcttcat 18655552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 277
Target Start/End: Complemental strand, 18724394 - 18724160
Alignment:
Q  43 tcttccttctcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgctatggttttaccggaaatctctacaaagatctttgta 142  Q
    ||||| || |||||| ||||||| ||  | |||||||| || || || || |||||||||||  | |||||||| ||  |||||||||| | ||||  |     
T  18724394 tcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactggtcatctctacaaggctcttactg 18724295  T
Q  143 agaagggcattcacaccttctttgatgacagagagcttccaggaggttacgaaataacaccatcactttttaaggccattgaagagtctaggatttttat 242  Q
    | ||||| || ||||||||| |||||||| | || || | | ||||  | ||||| | |||||||||    || |||||||||||||||||||| || ||    
T  18724294 acaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattgaagagtctaggatcttcat 18724195  T
Q  243 tcctgtcttgtctatcaattatgcttcttcttcat 277  Q
    |||||| || |||||||| ||||| ||||||||||    
T  18724194 tcctgtgttttctatcaactatgcctcttcttcat 18724160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 277
Target Start/End: Complemental strand, 18731813 - 18731579
Alignment:
Q  43 tcttccttctcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgctatggttttaccggaaatctctacaaagatctttgta 142  Q
    ||||| || |||||| ||||||| ||  | |||||||| || || || || |||||||||||  | |||||||| ||  ||||||||| || ||||  |     
T  18731813 tcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtgacggttttactggccatctctacagagctcttactg 18731714  T
Q  143 agaagggcattcacaccttctttgatgacagagagcttccaggaggttacgaaataacaccatcactttttaaggccattgaagagtctaggatttttat 242  Q
    | ||||| || ||||||||| |||||||| | || || | | ||||  | ||||| | |||||||||    || |||||||||||||||||||| || ||    
T  18731713 acaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattgaagagtctaggatcttcat 18731614  T
Q  243 tcctgtcttgtctatcaattatgcttcttcttcat 277  Q
    |||||| || |||||||| ||||| ||||||||||    
T  18731613 tcctgtgttttctatcaactatgcctcttcttcat 18731579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 277
Target Start/End: Complemental strand, 18679702 - 18679642
Alignment:
Q  217 gccattgaagagtctaggatttttattcctgtcttgtctatcaattatgcttcttcttcat 277  Q
    |||||||||||||||||||| || |||||||| || |||||||| ||||| ||||||||||    
T  18679702 gccattgaagagtctaggatcttcattcctgtgttttctatcaactatgcctcttcttcat 18679642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 277
Target Start/End: Complemental strand, 18699535 - 18699475
Alignment:
Q  217 gccattgaagagtctaggatttttattcctgtcttgtctatcaattatgcttcttcttcat 277  Q
    |||||||||||||||||||| || |||||||| || |||||||| ||||| ||||||||||    
T  18699535 gccattgaagagtctaggatcttcattcctgtgttttctatcaactatgcctcttcttcat 18699475  T

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Target: scaffold1254 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold1254
Description:

Target: scaffold1254; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 73 - 260
Target Start/End: Complemental strand, 209 - 22
Alignment:
Q  73 gtgttccttagttttagaggtagtgacactcgctatggttttaccggaaatctctacaaagatctttgtaagaagggcattcacaccttctttgatgaca 172  Q
    ||||||||||||||||| || | |||||||||| | ||||||||||| ||||||||||| | ||||  | | ||||| ||  | |||||| |||||||||    
T  209 gtgttccttagttttaggggcactgacactcgccacggttttaccggcaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgaca 110  T
Q  173 gagagcttccaggaggttacgaaataacaccatcactttttaaggccattgaagagtctaggatttttattcctgtcttgtctatcaa 260  Q
      || |||| | ||||  | ||||| |||||||||||  | |||||||| ||||| |||||||||||||||||||| || ||||||||    
T  109 atgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaa 22  T

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Target: scaffold0419 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 73 - 260
Target Start/End: Original strand, 7420 - 7607
Alignment:
Q  73 gtgttccttagttttagaggtagtgacactcgctatggttttaccggaaatctctacaaagatctttgtaagaagggcattcacaccttctttgatgaca 172  Q
    ||||||||||||||||| || | |||||||||| | ||||||||||| ||||||||||| | ||||  | | ||||| ||  | |||||| |||||||||    
T  7420 gtgttccttagttttaggggcactgacactcgccacggttttaccggcaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgaca 7519  T
Q  173 gagagcttccaggaggttacgaaataacaccatcactttttaaggccattgaagagtctaggatttttattcctgtcttgtctatcaa 260  Q
      || |||| | ||||  | ||||| |||||||||||  | |||||||| ||||| |||||||||||||||||||| || ||||||||    
T  7520 atgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaa 7607  T

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Target: scaffold0277 (Bit Score: 52; Significance: 7e-21; HSPs: 2)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 43 - 258
Target Start/End: Complemental strand, 4993 - 4778
Alignment:
Q  43 tcttccttctcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgctatggttttaccggaaatctctacaaagatctttgta 142  Q
    ||||| || |||||||||||||| ||  | |||||||| |||||||| || | |||||||||| | ||||||||||||||||||||||| | ||||  |     
T  4993 tcttcattttcctatggattcacttaccaagtgttcctcagttttaggggcattgacactcgccacggttttaccggaaatctctacaaggctcttactg 4894  T
Q  143 agaagggcattcacaccttctttgatgacagagagcttccaggaggttacgaaataacaccatcactttttaaggccattgaagagtctaggatttttat 242  Q
    | ||||| ||  | |||||| |||||||||  || |||| | ||||  | ||||| |||||||| ||    ||||||||||| || ||||||||||||||    
T  4893 acaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatccctccgcaaggccattgatgaatctaggatttttat 4794  T
Q  243 tcctgtcttgtctatc 258  Q
    |||||| || ||||||    
T  4793 tcctgtgttttctatc 4778  T

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Target: scaffold0277; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 73 - 260
Target Start/End: Complemental strand, 13924 - 13737
Alignment:
Q  73 gtgttccttagttttagaggtagtgacactcgctatggttttaccggaaatctctacaaagatctttgtaagaagggcattcacaccttctttgatgaca 172  Q
    |||||||| |||||||| || | |||||||||| | ||||||||||| ||||||||||| | ||||  | | ||||| ||  | |||||| |||||||||    
T  13924 gtgttcctcagttttaggggcactgacactcgccacggttttaccggcaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgaca 13825  T
Q  173 gagagcttccaggaggttacgaaataacaccatcactttttaaggccattgaagagtctaggatttttattcctgtcttgtctatcaa 260  Q
      || |||| | ||||  | ||||| |||||||||||  | |||||||| ||||| |||||||||||||||||||| || ||||||||    
T  13824 atgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaa 13737  T

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Target: chr1 (Bit Score: 45; Significance: 1e-16; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 217 - 277
Target Start/End: Complemental strand, 268492 - 268432
Alignment:
Q  217 gccattgaagagtctaggatttttattcctgtcttgtctatcaattatgcttcttcttcat 277  Q
    |||||||||||||||||||||||||||||||| || |||||||| ||||| ||||||||||    
T  268492 gccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcat 268432  T

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Target: chr1; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 194 - 277
Target Start/End: Complemental strand, 28127837 - 28127754
Alignment:
Q  194 aaataacaccatcactttttaaggccattgaagagtctaggatttttattcctgtcttgtctatcaattatgcttcttcttcat 277  Q
    |||| ||||| |||||||| |||||||||||||| ||||| |||||||||||||| || |||| ||| ||||| ||||||||||    
T  28127837 aaatcacaccgtcacttttaaaggccattgaagaatctagaatttttattcctgtattttctaccaactatgcctcttcttcat 28127754  T

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Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 277
Target Start/End: Complemental strand, 28164500 - 28164437
Alignment:
Q  214 aaggccattgaagagtctaggatttttattcctgtcttgtctatcaattatgcttcttcttcat 277  Q
    |||||||||||| | ||| | |||||||||||||| || |||||||| ||||| ||||||||||    
T  28164500 aaggccattgaaaaatcttgaatttttattcctgtgttatctatcaactatgcctcttcttcat 28164437  T

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Target: scaffold0781 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0781
Description:

Target: scaffold0781; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 125
Target Start/End: Complemental strand, 156 - 91
Alignment:
Q  60 attcacctatgacgtgttccttagttttagaggtagtgacactcgctatggttttaccggaaatct 125  Q
    |||||||||| |||||||||| ||||| |||||   |||||||||| ||||||||||||| |||||    
T  156 attcacctataacgtgttcctaagtttcagaggagctgacactcgccatggttttaccggcaatct 91  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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