View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14638_high_13 (Length: 371)
Name: NF14638_high_13
Description: NF14638
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14638_high_13 |
 |  |
|
| [»] scaffold0049 (1 HSPs) |
 |  |  |
|
| [»] scaffold0484 (1 HSPs) |
 |  |  |
|
| [»] scaffold0408 (1 HSPs) |
 |  |  |
|
| [»] scaffold0262 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr6 (Bit Score: 81; Significance: 5e-38; HSPs: 9)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 93 - 248
Target Start/End: Complemental strand, 21383873 - 21383714
Alignment:
| Q |
93 |
ggttaataggcttttaccccc-taccatttgggggtctttcggtataccccc-tgcnnnnnnnnn-cttggagattcccccttgtaaaatgtagattttt |
189 |
Q |
| |
|
||||||||||||||||||||| | |||||| ||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||| || |
|
|
| T |
21383873 |
ggttaataggcttttacccccctgccatttaggggtcttttggtatacccccctgcaaaaaaaaaacttggagattcccccttgtaaaatgtagattctt |
21383774 |
T |
 |
| Q |
190 |
tggtttacacccc-cagtccatttgattggataaattagcttatgtggcacgctgatgtg |
248 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
21383773 |
tggtttacaccccgcagtccatttgattggataaattagcttatgtggcgcgctgatgtg |
21383714 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 21383646 - 21383593
Alignment:
| Q |
315 |
taatactaaagatacgaaatatctaaaatacccctaagcattttcttcttctct |
368 |
Q |
| |
|
||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
21383646 |
taatactaaagatgcgaaatacctaaaatacccctaagcattttcttcttctct |
21383593 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 156 - 202
Target Start/End: Original strand, 21382549 - 21382595
Alignment:
| Q |
156 |
cttggagattcccccttgtaaaatgtagattttttggtttacacccc |
202 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||| |||| |
|
|
| T |
21382549 |
cttggagattcccccttgtaaaatgtagattctttggtttacccccc |
21382595 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 143
Target Start/End: Original strand, 12603938 - 12603988
Alignment:
| Q |
93 |
ggttaataggcttttaccccctaccatttgggggtctttcggtataccccc |
143 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| |||||| ||| ||||||| |
|
|
| T |
12603938 |
ggttaataggcttttaccccctgccatttgggagtcttttggtttaccccc |
12603988 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 157 - 202
Target Start/End: Complemental strand, 26545853 - 26545808
Alignment:
| Q |
157 |
ttggagattcccccttgtaaaatgtagattttttggtttacacccc |
202 |
Q |
| |
|
||||||||||||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
26545853 |
ttggagattcccccttgtaaaataaagattctttggtttacacccc |
26545808 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 26545920 - 26545871
Alignment:
| Q |
94 |
gttaataggcttttaccccctaccatttgggggtctttcggtataccccc |
143 |
Q |
| |
|
||||||||||||||||||||| ||||||| |||||||| ||| ||||||| |
|
|
| T |
26545920 |
gttaataggcttttaccccctgccatttgagggtcttttggtttaccccc |
26545871 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 93 - 143
Target Start/End: Complemental strand, 32146145 - 32146094
Alignment:
| Q |
93 |
ggttaataggctttta-ccccctaccatttgggggtctttcggtataccccc |
143 |
Q |
| |
|
|||||||||||||||| |||||| |||||||||||||||| ||| ||||||| |
|
|
| T |
32146145 |
ggttaataggcttttatccccctgccatttgggggtcttttggtttaccccc |
32146094 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 131
Target Start/End: Complemental strand, 25483452 - 25483414
Alignment:
| Q |
93 |
ggttaataggcttttaccccctaccatttgggggtcttt |
131 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
25483452 |
ggttaataggcttttaccccctgccatttgggagtcttt |
25483414 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 93 - 145
Target Start/End: Original strand, 6624254 - 6624305
Alignment:
| Q |
93 |
ggttaataggcttttaccccctaccatttgggggtctttcggtataccccctg |
145 |
Q |
| |
|
|||||||||| ||||||||| | |||||||||| ||||| ||||||||||||| |
|
|
| T |
6624254 |
ggttaataggtttttaccccttgccatttgggg-tcttttggtataccccctg |
6624305 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 79; Significance: 7e-37; HSPs: 9)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 93 - 248
Target Start/End: Original strand, 21261981 - 21262141
Alignment:
| Q |
93 |
ggttaataggcttttaccccc-taccatttgggggtctttcggtataccccc-tgcnnnnnnnnn--cttggagattcccccttgtaaaatgtagatttt |
188 |
Q |
| |
|
||||||||||||||||||||| | |||||| ||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||| | |
|
|
| T |
21261981 |
ggttaataggcttttacccccctgccatttaggggtcttttggtatacccccctgcaaaaaaaaaaacttggagattcccccttgtaaaatgtagattct |
21262080 |
T |
 |
| Q |
189 |
ttggtttacacccc-cagtccatttgattggataaattagcttatgtggcacgctgatgtg |
248 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
21262081 |
ttggtttacaccccgcagtccatttgattggataaattagcttatgtggcgcgctgatgtg |
21262141 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 21262209 - 21262262
Alignment:
| Q |
315 |
taatactaaagatacgaaatatctaaaatacccctaagcattttcttcttctct |
368 |
Q |
| |
|
||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
21262209 |
taatactaaagatgcgaaatacctaaaatacccctaagcattttcttcttctct |
21262262 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 156 - 202
Target Start/End: Complemental strand, 21263306 - 21263260
Alignment:
| Q |
156 |
cttggagattcccccttgtaaaatgtagattttttggtttacacccc |
202 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||| |||| |
|
|
| T |
21263306 |
cttggagattcccccttgtaaaatgtagattctttggtttacccccc |
21263260 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 143
Target Start/End: Complemental strand, 5769359 - 5769308
Alignment:
| Q |
93 |
ggttaataggcttttaccccc-taccatttgggggtctttcggtataccccc |
143 |
Q |
| |
|
||||||||||||||||||||| | |||||||||||||||| ||||||||||| |
|
|
| T |
5769359 |
ggttaataggcttttacccccctgccatttgggggtcttttggtataccccc |
5769308 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 145
Target Start/End: Original strand, 6591270 - 6591322
Alignment:
| Q |
93 |
ggttaataggcttttaccccctaccatttgggggtctttcggtataccccctg |
145 |
Q |
| |
|
|||||||||||||||||||||| |||||||| ||| ||| ||||||| ||||| |
|
|
| T |
6591270 |
ggttaataggcttttaccccctgccatttggtggtattttggtatactccctg |
6591322 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 143
Target Start/End: Complemental strand, 19628234 - 19628184
Alignment:
| Q |
93 |
ggttaataggcttttaccccctaccatttgggggtctttcggtataccccc |
143 |
Q |
| |
|
|||||||||| ||||||||||| ||||||||| |||||| ||| ||||||| |
|
|
| T |
19628234 |
ggttaataggtttttaccccctgccatttgggagtcttttggtttaccccc |
19628184 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 202
Target Start/End: Original strand, 47573157 - 47573203
Alignment:
| Q |
156 |
cttggagattcccccttgtaaaatgtagattttttggtttacacccc |
202 |
Q |
| |
|
||||||||||| |||||||||||| |||||||||||||| |||||| |
|
|
| T |
47573157 |
cttggagattcttccttgtaaaatgaagattttttggtttgcacccc |
47573203 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 19628167 - 19628126
Alignment:
| Q |
156 |
cttggagattcccccttgtaaaatgtagattttttggtttac |
197 |
Q |
| |
|
|||||||||||||||||||||||| ||||| |||||||||| |
|
|
| T |
19628167 |
cttggagattcccccttgtaaaataaagattatttggtttac |
19628126 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 201
Target Start/End: Complemental strand, 23526754 - 23526709
Alignment:
| Q |
156 |
cttggagattcccccttgtaaaatgtagattttttggtttacaccc |
201 |
Q |
| |
|
||||||||||||||| | ||||||| ||||| |||||||||||||| |
|
|
| T |
23526754 |
cttggagattcccccctataaaatgaagattctttggtttacaccc |
23526709 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 78; Significance: 3e-36; HSPs: 11)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 156 - 248
Target Start/End: Complemental strand, 1997044 - 1996951
Alignment:
| Q |
156 |
cttggagattcccccttgtaaaatgtagattttttggtttacaccccc-agtccatttgattggataaattagcttatgtggcacgctgatgtg |
248 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
1997044 |
cttggagattcccccttgtaaaatgtagattctttggtttacaccccccagtccatttgattggataaattagcttatgtggcgcgctgatgtg |
1996951 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 1996883 - 1996830
Alignment:
| Q |
315 |
taatactaaagatacgaaatatctaaaatacccctaagcattttcttcttctct |
368 |
Q |
| |
|
||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
1996883 |
taatactaaagatgcgaaatacctaaaatacccctaagcattttcttcttctct |
1996830 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 56083352 - 56083405
Alignment:
| Q |
90 |
aatggttaataggcttttaccccctaccatttgggggtctttcggtataccccc |
143 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |
|
|
| T |
56083352 |
aatggttaataggcttttaccccctgccatttgggggtcttttggtataccccc |
56083405 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 156 - 202
Target Start/End: Original strand, 1995935 - 1995981
Alignment:
| Q |
156 |
cttggagattcccccttgtaaaatgtagattttttggtttacacccc |
202 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||| |||| |
|
|
| T |
1995935 |
cttggagattcccccttgtaaaatgtagattctttggtttacccccc |
1995981 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 95 - 143
Target Start/End: Original strand, 47861936 - 47861984
Alignment:
| Q |
95 |
ttaataggcttttaccccctaccatttgggggtctttcggtataccccc |
143 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||| ||| ||||||| |
|
|
| T |
47861936 |
ttaataggcttttaccccctgccatttgggggtcttttggtttaccccc |
47861984 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 93 - 143
Target Start/End: Complemental strand, 1997111 - 1997060
Alignment:
| Q |
93 |
ggttaataggcttttaccccc-taccatttgggggtctttcggtataccccc |
143 |
Q |
| |
|
||||||||||||||||||||| | |||||| ||||||||| ||||||||||| |
|
|
| T |
1997111 |
ggttaataggcttttacccccctgccatttaggggtcttttggtataccccc |
1997060 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 93 - 144
Target Start/End: Original strand, 12861413 - 12861464
Alignment:
| Q |
93 |
ggttaataggcttttaccccctaccatttgggggtctttcggtataccccct |
144 |
Q |
| |
|
|||||||||||||||||||||| | |||||||||| ||| ||| |||||||| |
|
|
| T |
12861413 |
ggttaataggcttttaccccctgctatttgggggtgttttggtttaccccct |
12861464 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 93 - 143
Target Start/End: Complemental strand, 16314254 - 16314203
Alignment:
| Q |
93 |
ggttaataggcttttaccccc-taccatttgggggtctttcggtataccccc |
143 |
Q |
| |
|
||||||||||||||||||||| | |||||||||||||||| ||| ||||||| |
|
|
| T |
16314254 |
ggttaataggcttttacccccctgccatttgggggtcttttggtttaccccc |
16314203 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 93 - 143
Target Start/End: Complemental strand, 23506436 - 23506385
Alignment:
| Q |
93 |
ggttaataggcttttaccccc-taccatttgggggtctttcggtataccccc |
143 |
Q |
| |
|
||||||||||||||||||||| | |||||||||||||||| ||| ||||||| |
|
|
| T |
23506436 |
ggttaataggcttttacccccctgccatttgggggtcttttggtttaccccc |
23506385 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 139
Target Start/End: Complemental strand, 44355465 - 44355419
Alignment:
| Q |
93 |
ggttaataggcttttaccccctaccatttgggggtctttcggtatac |
139 |
Q |
| |
|
|||||||||| ||||||||||| |||||||| ||||||| ||||||| |
|
|
| T |
44355465 |
ggttaataggtttttaccccctgccatttggaggtcttttggtatac |
44355419 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 93 - 144
Target Start/End: Original strand, 20673566 - 20673618
Alignment:
| Q |
93 |
ggttaataggctttta-ccccctaccatttgggggtctttcggtataccccct |
144 |
Q |
| |
|
|||||||||||||||| |||||| ||||||||| |||||| ||| |||||||| |
|
|
| T |
20673566 |
ggttaataggcttttacccccctgccatttgggtgtcttttggtttaccccct |
20673618 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 71; Significance: 4e-32; HSPs: 6)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 9692327 - 9692401
Alignment:
| Q |
18 |
gattgtaccctaagagtttagctcctcatgttattctaaacataaacaaaagtatatgagagtaaatacatgaat |
92 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
9692327 |
gattgtaccctaagagtttagctcctcatgttattctaaacataaacaaaagtatatgagagtaaatatatgaat |
9692401 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 157 - 248
Target Start/End: Complemental strand, 7493018 - 7492926
Alignment:
| Q |
157 |
ttggagattcccccttgtaaaatgtagattttttggtttaca-cccccagtccatttgattggataaattagcttatgtggcacgctgatgtg |
248 |
Q |
| |
|
|||||||||||| ||||||||||||||||| ||||||| ||| |||||| |||| | |||||||||||||||||| ||||| |||||||||| |
|
|
| T |
7493018 |
ttggagattccctcttgtaaaatgtagattctttggttcacatcccccaaaccatctcattggataaattagcttaggtggcgcgctgatgtg |
7492926 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 156 - 202
Target Start/End: Original strand, 27490168 - 27490214
Alignment:
| Q |
156 |
cttggagattcccccttgtaaaatgtagattttttggtttacacccc |
202 |
Q |
| |
|
||||||||||||||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
27490168 |
cttggagattcccccttgtaaaatgaagattctttggtttacacccc |
27490214 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 87 - 242
Target Start/End: Complemental strand, 27491333 - 27491175
Alignment:
| Q |
87 |
atgaatggttaataggcttttaccccctaccatttgggggtctttcggtatacccc-ct-gcnnnnnnnnncttggagattcccccttgtaaaatgtaga |
184 |
Q |
| |
|
||||| |||||||||||||||||||||| | ||||||||| |||| |||| ||||| || | |||||||||||||| |||||||||| ||| |
|
|
| T |
27491333 |
atgaagggttaataggcttttaccccctgcaatttgggggacttttggtacacccctctatcaaaaaaaaacttggagattccccattgtaaaatgaaga |
27491234 |
T |
 |
| Q |
185 |
ttttttggtttacacccc-cagtccatttgattggataaattagcttatgtggcacgct |
242 |
Q |
| |
|
|| ||||||||||||||| | |||| ||| ||||| ||| |||| |||||||||||| |
|
|
| T |
27491233 |
ttctttggtttacacccctgatgccatctgactggatcaatgagctgatgtggcacgct |
27491175 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 143
Target Start/End: Original strand, 12316349 - 12316399
Alignment:
| Q |
93 |
ggttaataggcttttaccccctaccatttgggggtctttcggtataccccc |
143 |
Q |
| |
|
||||||||||||||||| |||| |||||||| ||||||| ||||||||||| |
|
|
| T |
12316349 |
ggttaataggcttttactccctgccatttggaggtcttttggtataccccc |
12316399 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 93 - 144
Target Start/End: Original strand, 27490100 - 27490152
Alignment:
| Q |
93 |
ggttaataggcttttacc-ccctaccatttgggggtctttcggtataccccct |
144 |
Q |
| |
|
|||||||||||||||||| |||| ||| ||||||||||| |||||||||||| |
|
|
| T |
27490100 |
ggttaataggcttttacctccctgtcatatgggggtcttttggtataccccct |
27490152 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 65; Significance: 2e-28; HSPs: 13)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 156 - 248
Target Start/End: Complemental strand, 48030223 - 48030131
Alignment:
| Q |
156 |
cttggagattcccccttgtaaaatgtagattttttggtttacacccccagtccatttgattggataaattagcttatgtggcacgctgatgtg |
248 |
Q |
| |
|
||||||||||| ||||| ||||||||||||| |||||||||||||||||| |||| ||||||||||||| |||||||||||| |||||||||| |
|
|
| T |
48030223 |
cttggagattctcccttataaaatgtagattctttggtttacacccccaggccatctgattggataaataagcttatgtggcgcgctgatgtg |
48030131 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 93 - 145
Target Start/End: Original strand, 9008762 - 9008814
Alignment:
| Q |
93 |
ggttaataggcttttaccccctaccatttgggggtctttcggtataccccctg |
145 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||| ||||||||||||| |
|
|
| T |
9008762 |
ggttaataggcttttaccccctgccatttgggggtcttttggtataccccctg |
9008814 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 95 - 204
Target Start/End: Original strand, 43402266 - 43402375
Alignment:
| Q |
95 |
ttaataggcttttaccccctaccatttgggggtctttcggtataccccctgcnnnnnnnnncttggagattcccccttgtaaaatgtagattttttggtt |
194 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||| ||| |||||||| |||||||||||||| |||||||| ||||| ||||||| |
|
|
| T |
43402266 |
ttaataggcttttaccccctgccatttgggggtcttttggtttaccccctatgaaaaaaaacttggagattcccctatgtaaaataaagattctttggtt |
43402365 |
T |
 |
| Q |
195 |
tacaccccca |
204 |
Q |
| |
|
|||||||||| |
|
|
| T |
43402366 |
tacaccccca |
43402375 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 156 - 202
Target Start/End: Original strand, 35712520 - 35712566
Alignment:
| Q |
156 |
cttggagattcccccttgtaaaatgtagattttttggtttacacccc |
202 |
Q |
| |
|
||||||||||||||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
35712520 |
cttggagattcccccttgtaaaatgaagattctttggtttacacccc |
35712566 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 156 - 202
Target Start/End: Complemental strand, 35713682 - 35713636
Alignment:
| Q |
156 |
cttggagattcccccttgtaaaatgtagattttttggtttacacccc |
202 |
Q |
| |
|
||||||||||||||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
35713682 |
cttggagattcccccttgtaaaatgaagattctttggtttacacccc |
35713636 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 157 - 245
Target Start/End: Original strand, 13970018 - 13970105
Alignment:
| Q |
157 |
ttggagattcccccttgtaaaatgtagattttttggtttacacccccagtccatttgattggataaattagcttatgtggcacgctgat |
245 |
Q |
| |
|
||||||||||||||| |||||||| ||||| ||||||||| ||||||| |||| ||| ||||| ||| || | ||||||||||||||| |
|
|
| T |
13970018 |
ttggagattccccct-gtaaaatgaagattctttggtttatacccccaaaccatatgactggattaatgagatgatgtggcacgctgat |
13970105 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 143
Target Start/End: Original strand, 17240718 - 17240769
Alignment:
| Q |
93 |
ggttaataggcttttaccccc-taccatttgggggtctttcggtataccccc |
143 |
Q |
| |
|
||||||||||||||||||||| | |||||||||||||||| ||||||||||| |
|
|
| T |
17240718 |
ggttaataggcttttacccccctgccatttgggggtcttttggtataccccc |
17240769 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 131
Target Start/End: Complemental strand, 48030289 - 48030251
Alignment:
| Q |
93 |
ggttaataggcttttaccccctaccatttgggggtcttt |
131 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
48030289 |
ggttaataggcttttaccccctgccatttgggggtcttt |
48030251 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 143
Target Start/End: Complemental strand, 51676388 - 51676338
Alignment:
| Q |
93 |
ggttaataggcttttaccccctaccatttgggggtctttcggtataccccc |
143 |
Q |
| |
|
||||||||| |||||||||||| | |||||||||||||| ||||||||||| |
|
|
| T |
51676388 |
ggttaatagacttttaccccctgctatttgggggtcttttggtataccccc |
51676338 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 93 - 143
Target Start/End: Original strand, 21747944 - 21747995
Alignment:
| Q |
93 |
ggttaataggcttttaccccc-taccatttgggggtctttcggtataccccc |
143 |
Q |
| |
|
||||||||||||||||||||| | |||||||||||||||| ||| ||||||| |
|
|
| T |
21747944 |
ggttaataggcttttacccccctgccatttgggggtcttttggtttaccccc |
21747995 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 143
Target Start/End: Complemental strand, 21749340 - 21749290
Alignment:
| Q |
93 |
ggttaataggcttttaccccctaccatttgggggtctttcggtataccccc |
143 |
Q |
| |
|
||||||||||||||||||||||||||| || | |||||| ||| ||||||| |
|
|
| T |
21749340 |
ggttaataggcttttaccccctaccatatgtgcgtcttttggtttaccccc |
21749290 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 2570867 - 2570815
Alignment:
| Q |
24 |
accctaagagtttagctcctcatgttattctaaacataaacaaaagtatatga |
76 |
Q |
| |
|
||||||| | |||| || |||||||| ||||||||| |||||||||||||||| |
|
|
| T |
2570867 |
accctaaaaatttaactactcatgttgttctaaacaaaaacaaaagtatatga |
2570815 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 93 - 145
Target Start/End: Original strand, 49383023 - 49383075
Alignment:
| Q |
93 |
ggttaataggcttttaccccctaccatttgggggtctttcggtataccccctg |
145 |
Q |
| |
|
||||||||| |||||||||||| |||||| |||| |||| ||| ||||||||| |
|
|
| T |
49383023 |
ggttaatagacttttaccccctgccatttaggggacttttggtttaccccctg |
49383075 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 53; Significance: 2e-21; HSPs: 8)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 168 - 248
Target Start/End: Complemental strand, 44038994 - 44038915
Alignment:
| Q |
168 |
cccttgtaaaatgtagattttttggtttacacccccagtccatttgattggataaattagcttatgtggcacgctgatgtg |
248 |
Q |
| |
|
||||| ||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||| |||||| ||||||||| |
|
|
| T |
44038994 |
cccttataaaatgtagattctttggtttacacccc-agaccatttgattggataaattagcttacgtggcatgctgatgtg |
44038915 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 93 - 144
Target Start/End: Original strand, 14099746 - 14099797
Alignment:
| Q |
93 |
ggttaataggcttttaccccctaccatttgggggtctttcggtataccccct |
144 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||| ||| |||||||| |
|
|
| T |
14099746 |
ggttaataggcttttaccccctgccatttgggggtcttttggtttaccccct |
14099797 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 143
Target Start/End: Original strand, 38973754 - 38973804
Alignment:
| Q |
93 |
ggttaataggcttttaccccctaccatttgggggtctttcggtataccccc |
143 |
Q |
| |
|
|||||||||| ||||||||||| |||||||||||| ||| ||||||||||| |
|
|
| T |
38973754 |
ggttaataggtttttaccccctgccatttgggggttttttggtataccccc |
38973804 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 143
Target Start/End: Original strand, 39004852 - 39004902
Alignment:
| Q |
93 |
ggttaataggcttttaccccctaccatttgggggtctttcggtataccccc |
143 |
Q |
| |
|
|||||||||| ||||||||||| |||||||||||| ||| ||||||||||| |
|
|
| T |
39004852 |
ggttaataggtttttaccccctgccatttgggggttttttggtataccccc |
39004902 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 93 - 143
Target Start/End: Original strand, 9755685 - 9755736
Alignment:
| Q |
93 |
ggttaataggcttttaccccc-taccatttgggggtctttcggtataccccc |
143 |
Q |
| |
|
||||||||| ||||||||||| | |||||||||||||||| ||||||||||| |
|
|
| T |
9755685 |
ggttaatagacttttacccccctgccatttgggggtcttttggtataccccc |
9755736 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 143
Target Start/End: Original strand, 42480899 - 42480949
Alignment:
| Q |
93 |
ggttaataggcttttaccccctaccatttgggggtctttcggtataccccc |
143 |
Q |
| |
|
|||||||||||||||||||||| |||||| ||||| ||| ||| ||||||| |
|
|
| T |
42480899 |
ggttaataggcttttaccccctgccatttaggggttttttggtttaccccc |
42480949 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 124
Target Start/End: Original strand, 3917791 - 3917828
Alignment:
| Q |
87 |
atgaatggttaataggcttttaccccctaccatttggg |
124 |
Q |
| |
|
||||| |||||||||||||||||||||| ||||||||| |
|
|
| T |
3917791 |
atgaagggttaataggcttttaccccctgccatttggg |
3917828 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 237
Target Start/End: Original strand, 44037681 - 44037750
Alignment:
| Q |
168 |
cccttgtaaaatgtagattttttggtttacacccccagtccatttgattggataaattagcttatgtggc |
237 |
Q |
| |
|
||||||||||||||||||||||||||| || ||| || || ||| |||||||||||||||| ||||| |
|
|
| T |
44037681 |
cccttgtaaaatgtagattttttggttcaccccctaaggtcacctgactggataaattagcttaagtggc |
44037750 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 10)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 90 - 203
Target Start/End: Original strand, 39605581 - 39605693
Alignment:
| Q |
90 |
aatggttaataggcttttaccccctaccatttgggggtctttcggtataccccctgcnnnnnnnnncttggagattcccccttgtaaaatgtagattttt |
189 |
Q |
| |
|
||||||||||||||||||||||| | |||||||||||| ||| ||| |||||| | ||||||||||||||| ||||||||| ||||| || |
|
|
| T |
39605581 |
aatggttaataggcttttacccc-tgccatttgggggttttttggtgtacccctgtcaaaaaaaaacttggagattcccccctgtaaaatgaagattctt |
39605679 |
T |
 |
| Q |
190 |
tggtttacaccccc |
203 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
39605680 |
tggtttacaccccc |
39605693 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 93 - 142
Target Start/End: Complemental strand, 13866006 - 13865958
Alignment:
| Q |
93 |
ggttaataggcttttaccccctaccatttgggggtctttcggtatacccc |
142 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||| |||||||||| |
|
|
| T |
13866006 |
ggttaataggcttttacccc-taccatttgggggtcttttggtatacccc |
13865958 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 143
Target Start/End: Complemental strand, 42278508 - 42278457
Alignment:
| Q |
93 |
ggttaataggcttttaccccc-taccatttgggggtctttcggtataccccc |
143 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||| ||| ||||||| |
|
|
| T |
42278508 |
ggttaataggcttttacccccctaccatttgggggtcttttggtttaccccc |
42278457 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 145
Target Start/End: Original strand, 42277230 - 42277284
Alignment:
| Q |
91 |
atggttaataggcttttaccccctaccatttgggggtctttcggtataccccctg |
145 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| | ||| ||||||||||||| |
|
|
| T |
42277230 |
atggttaataggcttttaccccctgccatttgggttttttttggtataccccctg |
42277284 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 3004274 - 3004206
Alignment:
| Q |
24 |
accctaagagtttagctcctcatgttattctaaacataaacaaaagtatatgagagtaaatacatgaat |
92 |
Q |
| |
|
|||||| ||||||| || ||||||||||| |||||| ||| |||||||||||| | |||||||||||| |
|
|
| T |
3004274 |
accctaggagtttaactactcatgttattttaaacaaaaataaaagtatatgaaaagaaatacatgaat |
3004206 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 93 - 143
Target Start/End: Complemental strand, 36438826 - 36438775
Alignment:
| Q |
93 |
ggttaataggcttttaccccc-taccatttgggggtctttcggtataccccc |
143 |
Q |
| |
|
||||||||||||||||||||| | |||||||||||||||| ||| ||||||| |
|
|
| T |
36438826 |
ggttaataggcttttacccccctgccatttgggggtcttttggtttaccccc |
36438775 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 93 - 144
Target Start/End: Original strand, 48537853 - 48537903
Alignment:
| Q |
93 |
ggttaataggcttttaccccctaccatttgggggtctttcggtataccccct |
144 |
Q |
| |
|
|||||||||||||||||||| | |||||||||||||||| ||| |||||||| |
|
|
| T |
48537853 |
ggttaataggcttttacccc-tgccatttgggggtcttttggtttaccccct |
48537903 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 142
Target Start/End: Complemental strand, 11151646 - 11151596
Alignment:
| Q |
93 |
ggttaataggcttttaccccc-taccatttgggggtctttcggtatacccc |
142 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||| |||| ||| |||||| |
|
|
| T |
11151646 |
ggttaataggcttttacccccctaccatttgggggacttttggtttacccc |
11151596 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 202
Target Start/End: Original strand, 34799932 - 34799978
Alignment:
| Q |
156 |
cttggagattcccccttgtaaaatgtagattttttggtttacacccc |
202 |
Q |
| |
|
|||||||||||||||||| |||||| ||||| |||||||||| |||| |
|
|
| T |
34799932 |
cttggagattcccccttgcaaaatgaagattctttggtttacccccc |
34799978 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 202
Target Start/End: Complemental strand, 34801378 - 34801332
Alignment:
| Q |
156 |
cttggagattcccccttgtaaaatgtagattttttggtttacacccc |
202 |
Q |
| |
|
|||||||||||||||||||||||| ||||| |||||||||| |||| |
|
|
| T |
34801378 |
cttggagattcccccttgtaaaataaagattctttggtttacccccc |
34801332 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 37; Significance: 0.000000000009; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 93 - 199
Target Start/End: Original strand, 29042337 - 29042444
Alignment:
| Q |
93 |
ggttaataggcttttaccccctaccatttgggggtctttcggtataccccct-gcnnnnnnnnncttggagattcccccttgtaaaatgtagattttttg |
191 |
Q |
| |
|
|||||||||||||||||||||| | |||||||||||||| |||||||| ||| |||||||||||||||||| |||||| ||||| |||| |
|
|
| T |
29042337 |
ggttaataggcttttaccccctgctatttgggggtcttttggtatacctcctataaaaaaaaaacttggagattcccccttgaaaaatgaagattctttg |
29042436 |
T |
 |
| Q |
192 |
gtttacac |
199 |
Q |
| |
|
|||||||| |
|
|
| T |
29042437 |
gtttacac |
29042444 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 73
Target Start/End: Original strand, 33712919 - 33712966
Alignment:
| Q |
26 |
cctaagagtttagctcctcatgttattctaaacataaacaaaagtata |
73 |
Q |
| |
|
|||||||| |||| | ||||||||||||||||||||||||||||||| |
|
|
| T |
33712919 |
cctaagaggttagattgtcatgttattctaaacataaacaaaagtata |
33712966 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 145
Target Start/End: Original strand, 30776467 - 30776520
Alignment:
| Q |
93 |
ggttaataggctttta-ccccctaccatttgggggtctttcggtataccccctg |
145 |
Q |
| |
|
|||||||||||||||| ||||||||||||||| || |||| |||| |||||||| |
|
|
| T |
30776467 |
ggttaataggcttttacccccctaccatttggaggacttttggtagaccccctg |
30776520 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0049 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0049
Description:
Target: scaffold0049; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 145
Target Start/End: Complemental strand, 3975 - 3923
Alignment:
| Q |
93 |
ggttaataggcttttaccccctaccatttgggggtctttcggtataccccctg |
145 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||| |||| ||| || |||||| |
|
|
| T |
3975 |
ggttaataggcttttaccccctgccatttgggggacttttggtttatcccctg |
3923 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0484 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0484
Description:
Target: scaffold0484; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 93 - 144
Target Start/End: Original strand, 11537 - 11588
Alignment:
| Q |
93 |
ggttaataggcttttaccccctaccatttgggggtctttcggtataccccct |
144 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| |||||| || |||||||| |
|
|
| T |
11537 |
ggttaataggcttttaccccctgccatttgggagtcttttggattaccccct |
11588 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0408 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0408
Description:
Target: scaffold0408; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 142
Target Start/End: Original strand, 10088 - 10136
Alignment:
| Q |
93 |
ggttaataggcttttaccccctaccatttgggggtctttcggtatacccc |
142 |
Q |
| |
|
|||||||||||||||||||| | |||||||||||||||| ||| |||||| |
|
|
| T |
10088 |
ggttaataggcttttacccc-tgccatttgggggtcttttggtttacccc |
10136 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0262 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0262
Description:
Target: scaffold0262; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 93 - 144
Target Start/End: Complemental strand, 4433 - 4381
Alignment:
| Q |
93 |
ggttaataggcttttacccccta-ccatttgggggtctttcggtataccccct |
144 |
Q |
| |
|
|||||||||||||||| ||||| |||||||||||||||| ||| |||||||| |
|
|
| T |
4433 |
ggttaataggcttttatccccttgccatttgggggtcttttggtttaccccct |
4381 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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