View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14638_low_17 (Length: 360)
Name: NF14638_low_17
Description: NF14638
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14638_low_17 |
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Alignment Details
Target: chr8 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 30 - 318
Target Start/End: Original strand, 42223534 - 42223822
Alignment:
| Q |
30 |
tgggaggttagacgagtctgccggccttccacattaatccatcatgatcaataattttacttggaccgttggttaccattagcaaccacaacctgcgaca |
129 |
Q |
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| T |
42223534 |
tgggaggttagacgagtctgtcggccttccacattaatccatcatgatcaataattttacttggactgtttgttaccattagcaaccacaacctgcgaca |
42223633 |
T |
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| Q |
130 |
ggtccacctctattttgttggcttttctggcagctatttgcatcttcgtggatttgtaataggttgcatatagaatcagctgcgccacagaaaacaatgt |
229 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42223634 |
ggtccacctctattttgttggcttttctggcagctatttgcatcttcgtggatttgtaataggttgcatatagaatcagctgcgccacagaaaacaatgt |
42223733 |
T |
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| Q |
230 |
tccaattccatttggtatctgagaattaacaaagaacaacagcaatggtcattcattagctttacgtctatttcatcaatatgtcgagg |
318 |
Q |
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|||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42223734 |
tccaattccatttggtatctgagagttaacaaagaacaacaacaatggtcattcattagctttacgtctatttcatcaatatgtcgagg |
42223822 |
T |
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