View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14638_low_3 (Length: 529)

Name: NF14638_low_3
Description: NF14638
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14638_low_3
NF14638_low_3
[»] chr4 (60 HSPs)
chr4 (30-521)||(40408487-40408977)
chr4 (242-519)||(6943055-6943332)
chr4 (20-239)||(13064866-13065072)
chr4 (240-521)||(13065345-13065627)
chr4 (20-234)||(51698764-51698969)
chr4 (32-234)||(55252482-55252672)
chr4 (20-229)||(16421889-16422086)
chr4 (32-234)||(13060304-13060494)
chr4 (33-227)||(32081234-32081416)
chr4 (32-234)||(33468070-33468255)
chr4 (20-189)||(2820670-2820832)
chr4 (20-229)||(32220620-32220815)
chr4 (20-185)||(8694595-8694753)
chr4 (32-153)||(6943687-6943812)
chr4 (40-234)||(19907086-19907268)
chr4 (32-185)||(37263631-37263777)
chr4 (22-185)||(31728423-31728579)
chr4 (32-185)||(31274396-31274542)
chr4 (32-185)||(37258931-37259077)
chr4 (32-234)||(29349273-29349465)
chr4 (277-519)||(16421316-16421554)
chr4 (44-234)||(33462434-33462607)
chr4 (242-519)||(32081672-32081940)
chr4 (22-178)||(5270480-5270630)
chr4 (277-521)||(12823471-12823711)
chr4 (20-153)||(12822966-12823093)
chr4 (20-171)||(31766768-31766912)
chr4 (348-462)||(13059739-13059854)
chr4 (19-112)||(5925852-5925943)
chr4 (19-112)||(27183183-27183274)
chr4 (20-178)||(12875291-12875444)
chr4 (242-462)||(19540725-19540945)
chr4 (32-189)||(23093986-23094137)
chr4 (277-462)||(5927798-5927984)
chr4 (20-108)||(47245082-47245170)
chr4 (257-521)||(23093387-23093649)
chr4 (277-426)||(31766238-31766386)
chr4 (240-462)||(5270966-5271188)
chr4 (32-109)||(19107529-19107606)
chr4 (240-462)||(31728934-31729156)
chr4 (114-189)||(39216242-39216317)
chr4 (277-462)||(51698246-51698434)
chr4 (277-496)||(55251962-55252178)
chr4 (308-461)||(19102308-19102463)
chr4 (32-109)||(19102917-19102994)
chr4 (242-426)||(37264110-37264292)
chr4 (277-462)||(19106938-19107124)
chr4 (457-521)||(4551257-4551321)
chr4 (32-108)||(8028216-8028292)
chr4 (35-171)||(16948895-16949026)
chr4 (275-369)||(1150946-1151039)
chr4 (242-420)||(37259410-37259586)
chr4 (116-185)||(5927363-5927431)
chr4 (429-521)||(15134438-15134531)
chr4 (32-80)||(19907269-19907317)
chr4 (58-109)||(48275930-48275981)
chr4 (32-106)||(12878856-12878929)
chr4 (264-334)||(15805208-15805278)
chr4 (61-103)||(16958263-16958305)
chr4 (190-234)||(12823099-12823143)
[»] chr7 (42 HSPs)
chr7 (20-239)||(12181808-12182023)
chr7 (22-239)||(12256855-12257060)
chr7 (32-240)||(21672032-21672233)
chr7 (257-521)||(10387915-10388178)
chr7 (32-239)||(10392157-10392353)
chr7 (22-239)||(3046407-3046612)
chr7 (20-224)||(42625634-42625831)
chr7 (58-234)||(8269138-8269302)
chr7 (20-185)||(26342089-26342247)
chr7 (32-234)||(3880806-3880999)
chr7 (32-239)||(10387417-10387614)
chr7 (45-229)||(12800233-12800405)
chr7 (32-185)||(4931105-4931251)
chr7 (32-237)||(9814943-9815139)
chr7 (32-237)||(10716868-10717064)
chr7 (403-521)||(27238527-27238645)
chr7 (114-234)||(27238993-27239107)
chr7 (240-521)||(3045840-3046123)
chr7 (277-432)||(8268653-8268808)
chr7 (44-166)||(16373248-16373364)
chr7 (348-521)||(21671480-21671642)
chr7 (32-189)||(27246616-27246765)
chr7 (32-109)||(13313382-13313459)
chr7 (114-229)||(2595669-2595778)
chr7 (33-107)||(23247627-23247701)
chr7 (114-234)||(23247884-23247998)
chr7 (20-109)||(26286214-26286303)
chr7 (48-165)||(6590097-6590208)
chr7 (277-426)||(26341574-26341722)
chr7 (243-462)||(42626135-42626356)
chr7 (381-496)||(3356767-3356881)
chr7 (348-462)||(13313883-13314000)
chr7 (22-105)||(4580420-4580503)
chr7 (387-462)||(12799748-12799825)
chr7 (73-189)||(23152177-23152287)
chr7 (112-239)||(23319750-23319872)
chr7 (62-107)||(44508427-44508472)
chr7 (114-185)||(44509594-44509664)
chr7 (384-432)||(30258460-30258508)
chr7 (32-112)||(15973669-15973751)
chr7 (451-519)||(30258387-30258455)
chr7 (32-68)||(44508364-44508400)
[»] chr6 (46 HSPs)
chr6 (20-239)||(19994440-19994653)
chr6 (30-239)||(12405426-12405623)
chr6 (242-519)||(22694854-22695131)
chr6 (22-234)||(11559269-11559469)
chr6 (22-234)||(11533759-11533959)
chr6 (22-234)||(5856823-5857023)
chr6 (32-234)||(25313541-25313733)
chr6 (32-234)||(26201035-26201227)
chr6 (20-234)||(20747353-20747555)
chr6 (22-234)||(11569749-11569949)
chr6 (24-239)||(17914425-17914628)
chr6 (32-239)||(11612971-11613166)
chr6 (20-185)||(16835218-16835377)
chr6 (125-239)||(22694518-22694632)
chr6 (242-521)||(2699640-2699917)
chr6 (20-225)||(2699171-2699364)
chr6 (348-519)||(12405990-12406161)
chr6 (20-185)||(6406916-6407074)
chr6 (20-185)||(17963614-17963772)
chr6 (259-521)||(19994959-19995213)
chr6 (277-462)||(11534289-11534476)
chr6 (277-462)||(11559799-11559986)
chr6 (23-171)||(17600273-17600414)
chr6 (118-228)||(11428810-11428914)
chr6 (58-229)||(14509820-14509979)
chr6 (115-234)||(4156480-4156593)
chr6 (32-229)||(33686711-33686896)
chr6 (277-518)||(4156936-4157176)
chr6 (32-108)||(22610463-22610539)
chr6 (274-456)||(17599704-17599886)
chr6 (355-496)||(11613411-11613551)
chr6 (242-463)||(16835704-16835926)
chr6 (400-462)||(11428339-11428401)
chr6 (277-426)||(17964139-17964287)
chr6 (303-462)||(25314061-25314222)
chr6 (303-462)||(26201555-26201716)
chr6 (32-109)||(12689920-12689997)
chr6 (240-319)||(12405900-12405980)
chr6 (384-519)||(5856294-5856424)
chr6 (277-371)||(11570327-11570420)
chr6 (275-369)||(20747881-20747974)
chr6 (20-109)||(19674724-19674813)
chr6 (58-107)||(12797880-12797929)
chr6 (308-371)||(33687260-33687322)
chr6 (32-98)||(22694451-22694517)
chr6 (76-108)||(29891988-29892020)
[»] chr2 (45 HSPs)
chr2 (20-228)||(24537079-24537281)
chr2 (32-234)||(12797767-12797957)
chr2 (32-234)||(25477357-25477547)
chr2 (32-234)||(25496452-25496642)
chr2 (32-227)||(29678523-29678706)
chr2 (32-239)||(40846650-40846845)
chr2 (32-185)||(30651796-30651942)
chr2 (32-234)||(12361090-12361275)
chr2 (240-519)||(40847133-40847407)
chr2 (381-496)||(17544969-17545084)
chr2 (32-185)||(19891575-19891719)
chr2 (20-185)||(9179784-9179941)
chr2 (20-185)||(18345289-18345456)
chr2 (20-185)||(9184475-9184632)
chr2 (32-185)||(17974418-17974565)
chr2 (22-185)||(17968021-17968176)
chr2 (41-111)||(34495183-34495253)
chr2 (32-189)||(12001967-12002124)
chr2 (70-185)||(1934097-1934205)
chr2 (20-107)||(19896903-19896988)
chr2 (240-462)||(9184962-9185184)
chr2 (242-462)||(25496869-25497091)
chr2 (23-160)||(25637824-25637955)
chr2 (242-462)||(9180273-9180493)
chr2 (23-166)||(15446341-15446480)
chr2 (277-462)||(25477877-25478063)
chr2 (348-462)||(28603633-28603747)
chr2 (277-462)||(18344752-18344938)
chr2 (32-108)||(44630516-44630592)
chr2 (302-426)||(7734954-7735079)
chr2 (32-166)||(28603985-28604114)
chr2 (242-426)||(1934539-1934721)
chr2 (33-166)||(42925745-42925871)
chr2 (120-189)||(20103259-20103329)
chr2 (242-462)||(12797254-12797476)
chr2 (182-239)||(19896855-19896912)
chr2 (32-112)||(32080324-32080405)
chr2 (277-462)||(19892053-19892233)
chr2 (278-462)||(31327079-31327264)
chr2 (33-105)||(31329017-31329089)
chr2 (33-105)||(31335738-31335810)
chr2 (36-112)||(7712114-7712192)
chr2 (277-426)||(17968543-17968691)
chr2 (303-376)||(38591629-38591701)
chr2 (182-226)||(34495308-34495352)
[»] chr3 (45 HSPs)
chr3 (20-228)||(20520805-20521001)
chr3 (32-234)||(14437758-14437953)
chr3 (32-229)||(46964856-46965040)
chr3 (32-234)||(12970876-12971068)
chr3 (32-185)||(7570283-7570429)
chr3 (20-185)||(18472888-18473046)
chr3 (32-185)||(39774893-39775039)
chr3 (20-185)||(55326659-55326817)
chr3 (274-481)||(11399671-11399880)
chr3 (55-236)||(12111676-12111861)
chr3 (32-185)||(18468094-18468240)
chr3 (32-185)||(23665189-23665335)
chr3 (32-185)||(23660557-23660703)
chr3 (20-183)||(55432110-55432265)
chr3 (58-229)||(12964977-12965136)
chr3 (22-185)||(27709813-27709967)
chr3 (32-185)||(757432-757576)
chr3 (348-521)||(3419276-3419449)
chr3 (114-229)||(3419836-3419945)
chr3 (348-521)||(3656878-3657050)
chr3 (240-462)||(18467553-18467777)
chr3 (240-462)||(18472335-18472559)
chr3 (277-426)||(757947-758096)
chr3 (240-462)||(14438242-14438464)
chr3 (424-519)||(10708390-10708485)
chr3 (398-520)||(12112367-12112490)
chr3 (276-521)||(25726355-25726600)
chr3 (277-463)||(46964338-46964524)
chr3 (32-109)||(29351178-29351255)
chr3 (242-426)||(23661010-23661192)
chr3 (22-109)||(3656315-3656402)
chr3 (386-519)||(20520339-20520469)
chr3 (240-376)||(10708245-10708381)
chr3 (242-426)||(24037917-24038099)
chr3 (348-462)||(2207397-2207514)
chr3 (277-426)||(39775308-39775456)
chr3 (348-462)||(55326104-55326221)
chr3 (277-426)||(23665705-23665851)
chr3 (277-462)||(27709260-27709444)
chr3 (131-185)||(32473183-32473237)
chr3 (32-104)||(7860663-7860736)
chr3 (242-493)||(17025648-17025902)
chr3 (387-463)||(55431642-55431720)
chr3 (32-86)||(3426047-3426101)
chr3 (242-329)||(3673024-3673112)
[»] chr1 (37 HSPs)
chr1 (21-229)||(19798052-19798248)
chr1 (32-239)||(11807047-11807247)
chr1 (21-234)||(16648687-16648888)
chr1 (20-185)||(10136207-10136365)
chr1 (240-519)||(16035894-16036173)
chr1 (277-521)||(38620977-38621220)
chr1 (32-185)||(25844638-25844784)
chr1 (35-185)||(51040592-51040735)
chr1 (277-519)||(19798582-19798821)
chr1 (58-185)||(10140975-10141095)
chr1 (114-221)||(8138474-8138585)
chr1 (22-178)||(12260863-12261014)
chr1 (32-185)||(26926786-26926934)
chr1 (284-519)||(40166267-40166495)
chr1 (82-229)||(33300379-33300514)
chr1 (242-519)||(39200307-39200574)
chr1 (277-462)||(51041091-51041277)
chr1 (277-462)||(33300827-33301012)
chr1 (117-189)||(38621589-38621661)
chr1 (32-112)||(38622137-38622217)
chr1 (32-109)||(23191905-23191982)
chr1 (40-152)||(47450269-47450375)
chr1 (277-432)||(47450807-47450962)
chr1 (32-224)||(16036453-16036634)
chr1 (22-109)||(40166891-40166978)
chr1 (240-462)||(10135656-10135878)
chr1 (380-521)||(11806622-11806763)
chr1 (240-426)||(10140462-10140646)
chr1 (242-462)||(16649180-16649402)
chr1 (32-110)||(39199835-39199917)
chr1 (302-462)||(39587973-39588132)
chr1 (57-151)||(39586171-39586260)
chr1 (242-462)||(26927265-26927487)
chr1 (277-426)||(25844120-25844266)
chr1 (131-229)||(39199918-39200010)
chr1 (80-152)||(46697248-46697315)
chr1 (192-229)||(20108201-20108238)
[»] chr5 (47 HSPs)
chr5 (20-234)||(12103892-12104094)
chr5 (20-185)||(6154488-6154647)
chr5 (32-234)||(20180221-20180408)
chr5 (20-185)||(26668160-26668318)
chr5 (20-185)||(26939757-26939915)
chr5 (20-185)||(37646111-37646271)
chr5 (32-185)||(37247867-37248014)
chr5 (23-185)||(29167032-29167187)
chr5 (22-185)||(37536994-37537152)
chr5 (20-185)||(7452636-7452795)
chr5 (277-519)||(6513496-6513734)
chr5 (386-521)||(20180738-20180873)
chr5 (32-185)||(36424520-36424666)
chr5 (22-140)||(10759419-10759531)
chr5 (20-190)||(36430395-36430558)
chr5 (242-462)||(26667602-26667824)
chr5 (242-462)||(26939199-26939421)
chr5 (61-185)||(39519277-39519394)
chr5 (61-185)||(39523916-39524033)
chr5 (242-462)||(9726299-9726520)
chr5 (23-106)||(40148797-40148880)
chr5 (75-234)||(6511740-6511890)
chr5 (400-519)||(16115937-16116056)
chr5 (240-462)||(37549694-37549918)
chr5 (240-389)||(23757356-23757505)
chr5 (240-389)||(23822812-23822961)
chr5 (32-112)||(17162804-17162885)
chr5 (277-462)||(37248383-37248569)
chr5 (242-462)||(40148225-40148447)
chr5 (32-178)||(16115297-16115436)
chr5 (277-462)||(7452084-7452268)
chr5 (242-426)||(29167517-29167701)
chr5 (32-112)||(17159324-17159405)
chr5 (32-112)||(23689019-23689099)
chr5 (240-462)||(37652492-37652716)
chr5 (32-109)||(35678966-35679043)
chr5 (32-112)||(40567670-40567750)
chr5 (348-429)||(15414518-15414600)
chr5 (384-462)||(35679561-35679641)
chr5 (277-462)||(36429039-36429225)
chr5 (32-87)||(6511671-6511726)
chr5 (23-112)||(15149613-15149701)
chr5 (182-237)||(15413898-15413953)
chr5 (400-462)||(12103355-12103419)
chr5 (242-328)||(557135-557222)
chr5 (242-328)||(561907-561994)
chr5 (32-88)||(4872854-4872910)
[»] chr8 (43 HSPs)
chr8 (240-480)||(26779429-26779669)
chr8 (32-234)||(38181350-38181540)
chr8 (32-234)||(15950640-15950833)
chr8 (60-228)||(23547700-23547861)
chr8 (32-219)||(26779957-26780132)
chr8 (240-521)||(23548159-23548440)
chr8 (32-189)||(44924989-44925140)
chr8 (22-226)||(18875443-18875635)
chr8 (22-229)||(1808294-1808489)
chr8 (23-239)||(2966417-2966622)
chr8 (32-185)||(33417412-33417558)
chr8 (277-463)||(18875970-18876155)
chr8 (32-185)||(40124962-40125108)
chr8 (35-234)||(1910018-1910206)
chr8 (384-521)||(28559340-28559476)
chr8 (32-112)||(28559184-28559264)
chr8 (242-519)||(1910501-1910777)
chr8 (381-496)||(2965940-2966059)
chr8 (352-521)||(28564461-28564631)
chr8 (65-189)||(17027018-17027136)
chr8 (65-189)||(17557510-17557628)
chr8 (260-520)||(22714556-22714816)
chr8 (242-519)||(38181789-38182064)
chr8 (32-112)||(28564363-28564443)
chr8 (384-521)||(28572117-28572254)
chr8 (242-461)||(15951097-15951319)
chr8 (109-239)||(22714137-22714261)
chr8 (119-229)||(19168606-19168712)
chr8 (20-189)||(24672375-24672538)
chr8 (400-519)||(17020625-17020741)
chr8 (400-519)||(17551062-17551178)
chr8 (242-496)||(19166944-19167196)
chr8 (242-462)||(1807776-1807996)
chr8 (263-462)||(36683909-36684109)
chr8 (32-107)||(33100541-33100615)
chr8 (240-321)||(2966101-2966183)
chr8 (183-229)||(17021198-17021244)
chr8 (183-229)||(17551635-17551681)
chr8 (258-494)||(24672886-24673117)
chr8 (32-109)||(7002594-7002673)
chr8 (22-73)||(17021243-17021294)
chr8 (22-73)||(17551680-17551731)
chr8 (348-452)||(33416886-33416994)
[»] scaffold0054 (4 HSPs)
scaffold0054 (32-234)||(30015-30205)
scaffold0054 (277-519)||(25730-25969)
scaffold0054 (267-521)||(29448-29698)
scaffold0054 (32-108)||(26393-26469)
[»] scaffold0690 (2 HSPs)
scaffold0690 (32-239)||(6065-6260)
scaffold0690 (348-496)||(5595-5742)
[»] scaffold0009 (1 HSPs)
scaffold0009 (240-519)||(147934-148213)
[»] scaffold0057 (1 HSPs)
scaffold0057 (32-229)||(35966-36150)
[»] scaffold0352 (2 HSPs)
scaffold0352 (20-185)||(7990-8149)
scaffold0352 (277-462)||(7434-7620)
[»] scaffold0002 (3 HSPs)
scaffold0002 (32-185)||(4946-5092)
scaffold0002 (22-234)||(442997-443197)
scaffold0002 (277-462)||(443525-443711)
[»] scaffold0240 (2 HSPs)
scaffold0240 (44-165)||(4872-4988)
scaffold0240 (274-376)||(4390-4490)
[»] scaffold0595 (1 HSPs)
scaffold0595 (65-109)||(3904-3948)


Alignment Details
Target: chr4 (Bit Score: 388; Significance: 0; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 388; E-Value: 0
Query Start/End: Original strand, 30 - 521
Target Start/End: Complemental strand, 40408977 - 40408487
Alignment:
Q  30 aaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattatttt 129  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| || |||||||||||||||||||||||||||||||    
T  40408977 aaataaaatagaacacacatattattagtgtttaaattgcggtatttaattttaaatatttgata-tggtaaaaataatagtagtagtaattattatttt 40408879  T
Q  130 tattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttccttcattcaaat 229  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  40408878 tattagtgaatatcacttcccatacatttagcttatggtggtagtgatagaaataagaataagaattcaattgaattttttatttttctttcattcaaat 40408779  T
Q  230 acaatgagttaataagagtgttcttataccttagtctctcttctgtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataat 329  Q
    ||||||||||||||||||||||||||| | ||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||    
T  40408778 acaatgagttaataagagtgttcttattcattagtctctgttctgtataatgtcccttctaaaccaagaaaagtcttaaaaacatagtctctgtgataat 40408679  T
Q  330 gtatgttcattaggaataaaagagtacttttaagatcatagttccttcgagaacaataatgtctcatcgaaattaagaatgatcttaacggtatataaat 429  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||| ||||||||||    
T  40408678 gtatgttcatttggaataaaagagtacttttaagatcatagttcctttgagaacaataatgtctcatcggaattaagaatgattttaacagtatataaat 40408579  T
Q  430 attctttcaatgtttttctatttgagaagaaattaaaaagtcaaaatggtggcatcatcatatttgaatgattgtagtgtcatattgatatt 521  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||  ||| ||||||||||||||    
T  40408578 attctttcaatgtttttctatttgagaagaaattaaaaagtcaaaatggtggtatcatcgtatttgaattatcatagggtcatattgatatt 40408487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 242 - 519
Target Start/End: Complemental strand, 6943332 - 6943055
Alignment:
Q  242 taagagtgttcttat-accttagtctctcttctgtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcatt 340  Q
    ||||||||||||||  |||||||||  | ||| ||||||||||||||| |||| |||||| |||||||||| |||||| ||  |||||| ||||| ||||    
T  6943332 taagagtgttcttaagaccttagtccatattcggtataatgtcccttcagaattaagaaaggtcttaaaaaaatagtctcttcgataatatatgtccatt 6943233  T
Q  341 aggaataaaagagtacttttaagatcatagttccttcgagaacaataatgtctcatcgaaattaagaatgatcttaacggtatataaatattctttcaat 440  Q
     ||||||||  |||| ||||||||||||||| ||||   ||| ||||||||| | ||| |||||||||||||||||| ||||||||||||||||||||||    
T  6943232 cggaataaat-agtatttttaagatcatagtcccttttggaataataatgtcgcgtcggaattaagaatgatcttaatggtatataaatattctttcaat 6943134  T
Q  441 gtttttctatttgagaagaaattaaaaagtcaaaatggtggcatcatcatatttgaatgattgtagtgtcatattgata 519  Q
     |||||||| || |||||||||||||||||||||||||||  |||| ||||||||| || |||||||  ||||||||||    
T  6943133 atttttctaattaagaagaaattaaaaagtcaaaatggtgatatcaccatatttgagtggttgtagtaccatattgata 6943055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 20 - 239
Target Start/End: Original strand, 13064866 - 13065072
Alignment:
Q  20 tgggggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaa 119  Q
    ||||||||| | ||||||||||||||||| || | || ||||||||||||||||||||||||||||||||||||||||||||||||||      ||||||    
T  13064866 tgggggtcccacataaaatagaacacacacatcaatagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaataa------tagtaa 13064959  T
Q  120 ttattatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattg-aatttcttatttttcc 218  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||      ||||||||||||||||||||| |||||||||| ||| |    
T  13064960 ttattatttttattcgtgaatatcacttcccata-atttagcttatggtggttgtg------ataagaataagaattcaattgaaatttcttatattttc 13065052  T
Q  219 ttcattcaaatacaatgagtt 239  Q
    ||||||||||| |||||||||    
T  13065053 ttcattcaaat-caatgagtt 13065072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 240 - 521
Target Start/End: Original strand, 13065345 - 13065627
Alignment:
Q  240 aataagagtgttcttat-accttagtctctcttctgtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttca 338  Q
    ||||||||||||||||  ||||||||| || ||| | ||||||||||||| |||| |||||| ||||||||||||||| ||||  |||||||||||| |     
T  13065345 aataagagtgttcttaagaccttagtccctattcggcataatgtcccttcggaattaagaaaggtcttaaaaacatagccccttcgataatgtatgtccc 13065444  T
Q  339 ttaggaataaaagagtacttttaagatcatagttccttcgagaacaataatgtctcatcgaaattaagaatgatcttaacggtatataaatattctttca 438  Q
    || | ||||||   | ||||||||||||||||| ||||   ||||||||| ||| | ||||||| ||||||||| ||||| |||||||||||||||||||    
T  13065445 ttcgaaataaatatg-acttttaagatcatagtgccttttggaacaataacgtcccgtcgaaatcaagaatgattttaacagtatataaatattctttca 13065543  T
Q  439 atgtttttctatttgagaagaaatt-aaaaagtcaaaatggtggcatcatcatatttgaatgattgtagtgtcatattgatatt 521  Q
    || |||||||| ||||||||||||| |||||||| |||| |||  |||| ||||||||| || | ||||||| |||||||||||    
T  13065544 atatttttctacttgagaagaaattaaaaaagtcgaaattgtgttatcaccatatttgagtggtcgtagtgttatattgatatt 13065627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 20 - 234
Target Start/End: Complemental strand, 51698969 - 51698764
Alignment:
Q  20 tgggggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaa 119  Q
    ||||||||| | ||||||||||||||||| |||| || ||||||||||||||||||||||||||||| ||||||||||||||||| ||    | ||||||    
T  51698969 tgggggtcccacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatgcttgataatgataaaaaaaa----aatagtaa 51698874  T
Q  120 ttatta-tttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttcc 218  Q
    |||||| |||||||||| ||||||||||| ||||| ||||||||||||||||| |||      ||||||||||||||| |||| |||||||||| |||||    
T  51698873 ttattattttttattcgagaatatcactttccataaatttagcttatggtggttgtg------ataagaataagaatttaattaaatttcttatatttcc 51698780  T
Q  219 ttcattcaaatacaat 234  Q
    ||||||||||| ||||    
T  51698779 ttcattcaaatccaat 51698764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 32 - 234
Target Start/End: Complemental strand, 55252672 - 55252482
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattattttta 131  Q
    ||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||      ||| ||||||||||||||    
T  55252672 ataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaataa------tagcaattattattttta 55252579  T
Q  132 ttcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttccttcattcaaatac 231  Q
    || | |||||| |||| ||||| ||||||||||||||||| |||      ||||||||||||||| |||| |||||||||| |||||||||||||||| |    
T  55252578 ttggagaatattactttccataaatttagcttatggtggttgtg------ataagaataagaatttaattaaatttcttatatttccttcattcaaatcc 55252485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 20 - 229
Target Start/End: Complemental strand, 16422086 - 16421889
Alignment:
Q  20 tgggggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaa 119  Q
    ||||||||| | ||||||||||||||||  |||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||      |||||    
T  16422086 tgggggtcccacataaaatagaacacacgcattagtagtgtttaaattgcggtatttaattttcaatacttgataatgataaaaataat------agtaa 16421993  T
Q  120 ttattatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttcct 219  Q
    |||||||||||||||| ||||||||||| ||||| ||||| ||||||||||| |||      ||||||||||||||| |||| ||||| |||| ||||||    
T  16421992 ttattatttttattcgagaatatcactttccataaatttaacttatggtggttgtg------ataagaataagaatttaattaaatttattatatttcct 16421899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 32 - 234
Target Start/End: Complemental strand, 13060494 - 13060304
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattattttta 131  Q
    |||||| ||||| |||| |||  || |||||||||||||||||||||||||||||||||||||||||||| |||||      |||||||| |||||||||    
T  13060494 ataaaaaagaactcacacattggtagtgtttaaattgcggtatttaattttaaatacttgataatgataacaataa------tagtaattcttattttta 13060401  T
Q  132 ttcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttccttcattcaaatac 231  Q
    || | ||||||||||||||||| ||||||||||||||||| |||      |||| |||||||||| ||||||||||||||| |||||||||||||||| |    
T  13060400 tttgagaatatcacttcccataaatttagcttatggtggttgtg------ataaaaataagaatttaattgaatttcttatatttccttcattcaaatcc 13060307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 33 - 227
Target Start/End: Original strand, 32081234 - 32081416
Alignment:
Q  33 taaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattatttttat 132  Q
    ||||||||||| |||| |||| || ||||||||||| | ||||||||||||||||||||||||| ||||||||||||||      |||||||||||||||    
T  32081234 taaaatagaactcacacattagtagtgtttaaattgtgatatttaattttaaatacttgataattataaaaataatagt------aattattatttttat 32081327  T
Q  133 tcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttccttcattcaa 227  Q
    ||| ||||||||||||||||| ||||||||||||||||| |||      ||||||||||||||| |||||||||| |||| ||| ||||||||||    
T  32081328 tcgagaatatcacttcccataaatttagcttatggtggttgtg------ataagaataagaatttaattgaattttttatattttcttcattcaa 32081416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 32 - 234
Target Start/End: Original strand, 33468070 - 33468255
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattattttta 131  Q
    ||||||||||||||||| |||| || |||||||||||  |||||||||||||||||||||||||||||||||||||      ||||||||||||||||||    
T  33468070 ataaaatagaacacacacattagtagtgtttaaattgtagtatttaattttaaatacttgataatgataaaaataa------tagtaattattattttta 33468163  T
Q  132 ttcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttccttcattcaaatac 231  Q
         ||||||||||||||||| |||||||||||||||||  ||      ||||||||||||||| ||||||||||||||| |||||||||||||||| |    
T  33468164 -----gaatatcacttcccataaatttagcttatggtggttatg------ataagaataagaatttaattgaatttcttatatttccttcattcaaattc 33468252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 20 - 189
Target Start/End: Complemental strand, 2820832 - 2820670
Alignment:
Q  20 tgggggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaa 119  Q
    ||||||||| | ||||||||||||||||| |||| || ||||||||||||||||||||||||||| || ||||||||||||||||||||      |||||    
T  2820832 tgggggtcccacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaattatttgataatgataaaaataat------agtaa 2820739  T
Q  120 ttattatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaat 189  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||| |||| |||||| || |||||||    
T  2820738 ttattatttttatt-gtgaatatcacttcccataaatttagcttatgttggttgtgataagattaagaat 2820670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 20 - 229
Target Start/End: Original strand, 32220620 - 32220815
Alignment:
Q  20 tgggggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaa 119  Q
    ||||||||| | ||||||||||||| ||| ||||||| |||||||||| || |||||||||||||||| |||||||||||||||||||      ||||||    
T  32220620 tgggggtcccacataaaatagaacatacacattattagtgtttaaattccgatatttaattttaaatatttgataatgataaaaataa------tagtaa 32220713  T
Q  120 ttattatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttcct 219  Q
    |||||||||||||||  |||||||||||  |||| ||||| ||||||||||| |||      ||||||||||||||| |||| |||||||||| ||||||    
T  32220714 ttattatttttattc--gaatatcacttttcataaatttaacttatggtggttgtg------ataagaataagaatttaattaaatttcttatatttcct 32220805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 8694753 - 8694595
Alignment:
Q  20 tgggggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaa 119  Q
    ||||||||| | ||||||||||||||||| |||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||      |||||    
T  8694753 tgggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataat------agtaa 8694660  T
Q  120 ttattatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataa 185  Q
    |||||| ||||||||| ||||||||||| ||||| |||||| |||||||||| |||||| ||||||    
T  8694659 ttatta-ttttattcgagaatatcactttccataaatttaggttatggtggttgtgataagaataa 8694595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 32 - 153
Target Start/End: Complemental strand, 6943812 - 6943687
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgata----aaaataatagtagtagtaattattatt 127  Q
    ||||||||||||||| | |||| ||||||||||||||| ||||||||||| ||||||||||||||||||    |||||||||||||||||||||||||||    
T  6943812 ataaaatagaacacatacattagtaatgtttaaattgctgtatttaatttcaaatacttgataatgataaaaaaaaataatagtagtagtaattattatt 6943713  T
Q  128 tttattcgtgaatatcacttcccata 153  Q
    |||||| |||||||||||||||||||    
T  6943712 tttattggtgaatatcacttcccata 6943687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 40 - 234
Target Start/End: Complemental strand, 19907268 - 19907086
Alignment:
Q  40 gaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattatttttattcgtgaa 139  Q
    ||||||||| ||||  | |||||||||||||||||||||||||||||||||||| |||||||||||||      ||| ||||||||||||||||||||||    
T  19907268 gaacacacacattagcagtgtttaaattgcggtatttaattttaaatacttgatgatgataaaaataa------tagaaattattatttttattcgtgaa 19907175  T
Q  140 tatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttccttcattcaaatacaat 234  Q
    |||||||||||||| |||||||||||| | || | |      ||||||||||||||| |||| |||||||||| |||||||| ||||||| ||||    
T  19907174 tatcacttcccataaatttagcttatgattgttgcg------ataagaataagaatttaattaaatttcttatatttccttcgttcaaatccaat 19907086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 32 - 185
Target Start/End: Original strand, 37263631 - 37263777
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattattttta 131  Q
    ||||||||||||||||| |||| || ||||||||||| ||||||||||||||||||||||||| ||||||||||||      |||||||||||| |||||    
T  37263631 ataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgatagtgataaaaataa------tagtaattatta-tttta 37263723  T
Q  132 ttcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataa 185  Q
    |||| ||||||||||| ||||| ||||||||||||||||| |||||| ||||||    
T  37263724 ttcgagaatatcactttccataaatttagcttatggtggttgtgataagaataa 37263777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 22 - 185
Target Start/End: Original strand, 31728423 - 31728579
Alignment:
Q  22 ggggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaatt 121  Q
    ||||||| | ||||||||||||||||| |||| || ||||||||||| ||||||||||||||||||||| ||||||||||||||||      ||||||||    
T  31728423 ggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttcataatgataaaaataa------tagtaatt 31728516  T
Q  122 attatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataa 185  Q
    |||| ||||||||| |||||||||||  |||| ||||||||||||||||| |||||| ||||||    
T  31728517 atta-ttttattcgagaatatcacttttcataaatttagcttatggtggttgtgataagaataa 31728579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 32 - 185
Target Start/End: Complemental strand, 31274542 - 31274396
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattattttta 131  Q
    ||||||||||||||||| |||| || ||||||||||| ||||||||||||||||||||||| | |||||||||||||      ||||||||||| |||||    
T  31274542 ataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgacagtgataaaaataat------agtaattatta-tttta 31274450  T
Q  132 ttcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataa 185  Q
    |||| ||||||||||| ||||| ||||||||||||||||| |||||| ||||||    
T  31274449 ttcgagaatatcactttccataaatttagcttatggtggttgtgataagaataa 31274396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 32 - 185
Target Start/End: Original strand, 37258931 - 37259077
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattattttta 131  Q
    ||||||||||||||||| |||| || ||||||||||| ||||||||||||||||||||||||| ||||||||||||      |||||||||||| |||||    
T  37258931 ataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgatagtgataaaaataa------tagtaattatta-tttta 37259023  T
Q  132 ttcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataa 185  Q
    || | ||||||||||| ||||| ||||||||||||||||| |||||| ||||||    
T  37259024 ttagagaatatcactttccataaatttagcttatggtggttgtgataagaataa 37259077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 32 - 234
Target Start/End: Original strand, 29349273 - 29349465
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattattttta 131  Q
    |||||||||||| |||| ||||  | |||||||||||||||||||||||||||||||| |||||||||||||  |||| || || | |||||  ||||||    
T  29349273 ataaaatagaactcacacattagcagtgtttaaattgcggtatttaattttaaatactggataatgataaaa--aataatattaattattat--ttttta 29349368  T
Q  132 ttcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttccttcattcaaatac 231  Q
    ||||||||||||| |||||||| |||||||||||||| ||  ||      |||||||||| |||| |||| |||||||||| |||||||||||||||| |    
T  29349369 ttcgtgaatatcatttcccataaatttagcttatggttgttatg------ataagaataaaaatttaattaaatttcttatatttccttcattcaaatcc 29349462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 277 - 519
Target Start/End: Complemental strand, 16421554 - 16421316
Alignment:
Q  277 taatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcattaggaataaaagagtacttttaagatcatagttcctt 376  Q
    |||||||||||| |||| |||||  ||||||||||||||||||||  |||||| || || | || |||||||| ||||||| ||||||||||||| ||||    
T  16421554 taatgtcccttcggaattaagaatggtcttaaaaacatagtcccttcgataatataagtccctttggaataaa-gagtactattaagatcatagtccctt 16421456  T
Q  377 cgag-aacaataatgtctcatcgaaattaagaatgatcttaacggtatataaatattctttcaatgtttttctatttgagaagaaattaaaaagtcaaaa 475  Q
       | || ||||||||| | ||| |||||||||||||||||||||||||||||||||||||| || |||   || ||||| ||||||| ||||||  |||    
T  16421455 tttggaataataatgtcccgtcggaattaagaatgatcttaacggtatataaatattctttcgatattt---taattgaggagaaatt-aaaagtggaaa 16421360  T
Q  476 tggtggcatcatcatatttgaatgattgtagtgtcatattgata 519  Q
    |||| | |||| ||||||||| || | |||||| ||||||||||    
T  16421359 tggtcgtatcaccatatttgagtggtcgtagtgccatattgata 16421316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 44 - 234
Target Start/End: Original strand, 33462434 - 33462607
Alignment:
Q  44 acacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattatttttattcgtgaatatc 143  Q
    ||||| |||| || |||||||||||| || ||||||||||||||||||||||||||||||||||      ||||||||||||||||||     |||||||    
T  33462434 acacacattagtagtgtttaaattgcagtgtttaattttaaatacttgataatgataaaaataa------tagtaattattattttta-----gaatatc 33462522  T
Q  144 acttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttccttcattcaaatacaat 234  Q
    |||||||||| |||||||||| |||||| |||      |||||||||| |||| |||||||||| |||| |||||||||||||||| ||||    
T  33462523 acttcccataaatttagcttacggtggttgtg------ataagaataataatttaattgaattttttatatttccttcattcaaatccaat 33462607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 242 - 519
Target Start/End: Original strand, 32081672 - 32081940
Alignment:
Q  242 taagagtgttcttataccttagtctctcttctgtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcatta 341  Q
    |||||||||||||| ||| ||||| || ||| || |||||||||||  |||| |||||  ||||||||||||||||||||  |||||| || || | ||     
T  32081672 taagagtgttcttaaaccatagtcccttttcggtttaatgtccctttggaattaagaatggtcttaaaaacatagtcccttcgataatataagtcccttc 32081771  T
Q  342 ggaataaaagagtacttttaagatcatagttccttcgagaacaataatgtctcatcgaaattaagaatgatcttaacggtatataaatattctttcaatg 441  Q
    ||||| |||||||||| ||||||||||||| ||||   ||| ||||||||| | ||| ||||||     |||||||| |||||||||||||||| ||||     
T  32081772 ggaat-aaagagtactattaagatcatagtcccttttggaataataatgtcccgtcggaattaa-----atcttaacagtatataaatattcttccaata 32081865  T
Q  442 tttttctatttgagaagaaattaaaaagtcaaaatggtggcatcatcatatttgaatgattgtagtgtcatattgata 519  Q
    |||   || ||||| |||||||||||| |  ||||||||| |||| ||||||||| || | |||||| ||||||||||    
T  32081866 ttt---taattgaggagaaattaaaaaatggaaatggtggtatcaccatatttgagtggtcgtagtgccatattgata 32081940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 22 - 178
Target Start/End: Original strand, 5270480 - 5270630
Alignment:
Q  22 ggggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatac-ttgataatgataaaaataatagtagtagtaat 120  Q
    ||||||| | ||||||||||||||||| |||| || | ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||      |    
T  5270480 ggggtcccacataaaatagaacacacacattagtagtatttaaattgtggtatttaattttaaatactttgataatgataaaaataatagtag------t 5270573  T
Q  121 tattatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgata 178  Q
    ||||| ||||||||  ||||||||||| ||||| ||||||||||||||||| ||||||    
T  5270574 tatta-ttttattctcgaatatcactttccataaatttagcttatggtggttgtgata 5270630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 277 - 521
Target Start/End: Original strand, 12823471 - 12823711
Alignment:
Q  277 taatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcattaggaataaaagagtacttttaagatcatagttcctt 376  Q
    |||||||||||| |||| || ||  |||||||||||||||||| |  |||||| || || | || |||||||| ||||| | ||||||||||||  ||||    
T  12823471 taatgtcccttcagaattaaaaatggtcttaaaaacatagtccattcgataatataagtcctttcggaataaa-gagtattattaagatcatagaccctt 12823569  T
Q  377 cgagaacaataatgtctcatcgaaattaagaatgatcttaacggtatataaatattctttcaatgtttttctatttgagaagaaattaaaaagtcaaaat 476  Q
       ||| ||||||||  | ||| ||||||||||||||||||| ||||||||||||||||||||| |||   || ||||  ||||||| ||||||  ||||    
T  12823570 ttggaataataatgttccgtcggaattaagaatgatcttaacagtatataaatattctttcaatattt---taattgatgagaaatttaaaagttgaaat 12823666  T
Q  477 ggtggcatcatcatatttgaatgattgtagtgtcatattgatatt 521  Q
    ||||| |||| ||||||||| || | |||||||||||||||||||    
T  12823667 ggtggtatcaccatatttgagtggtcgtagtgtcatattgatatt 12823711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 20 - 153
Target Start/End: Original strand, 12822966 - 12823093
Alignment:
Q  20 tgggggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaa 119  Q
    ||||||||| | |||||||||||| |||| |||| || |||||||| || ||||||||||||||||||||| ||||||||||||||||      ||||||    
T  12822966 tgggggtcccacataaaatagaactcacacattagtagtgtttaaactgtggtatttaattttaaatactttataatgataaaaataa------tagtaa 12823059  T
Q  120 ttattatttttattcgtgaatatcacttcccata 153  Q
    |||||||||||||||  |||||||||||||||||    
T  12823060 ttattatttttattccagaatatcacttcccata 12823093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 20 - 171
Target Start/End: Complemental strand, 31766912 - 31766768
Alignment:
Q  20 tgggggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaatttt-aaatacttgataatgataaaaataatagtagtagta 118  Q
    ||||||||| | ||||||||||||||||| |||| || |||| |||||| ||||||||||||| ||||||||||||||||||||||||||      ||||    
T  31766912 tgggggtcccacataaaatagaacacacacattaatagtgtt-aaattgtggtatttaatttttaaatacttgataatgataaaaataat------agta 31766820  T
Q  119 attattatttttattcgtgaatatcacttcccatacatttagcttatggtggt 171  Q
    ||||||| ||||||||| ||||||||||| ||||| |||||| ||||||||||    
T  31766819 attatta-ttttattcgagaatatcactttccataaatttagtttatggtggt 31766768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 348 - 462
Target Start/End: Complemental strand, 13059854 - 13059739
Alignment:
Q  348 aaagagtacttttaagatcatagttcct-tcgagaacaataatgtctcatcgaaattaagaatgatcttaacggtatataaatattctttcaatgttttt 446  Q
    |||||||||||||||||||||||| ||| |  |||| || |||||| | ||| ||||||||||||||||||||||||||||| ||| ||||||| |||||    
T  13059854 aaagagtacttttaagatcatagtccctatttagaataacaatgtcccgtcggaattaagaatgatcttaacggtatataaaaattatttcaatattttt 13059755  T
Q  447 ctatttgagaagaaat 462  Q
    ||||||||| ||||||    
T  13059754 ctatttgaggagaaat 13059739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 5925852 - 5925943
Alignment:
Q  19 atgggggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagta 112  Q
    |||||||||| | ||||||||||||||||||  || || ||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  5925852 atgggggtcccacataaaatagaacacacat--tagtagtgtttaaattatggtatttaattttaaatacttgataatgataaaaataatagta 5925943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 27183274 - 27183183
Alignment:
Q  19 atgggggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagta 112  Q
    |||||||||| | ||||||||||||||||||  || || ||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  27183274 atgggggtcccacataaaatagaacacacat--tagtagtgtttaaattatggtatttaattttaaatacttgataatgataaaaataatagta 27183183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 20 - 178
Target Start/End: Complemental strand, 12875444 - 12875291
Alignment:
Q  20 tgggggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaa 119  Q
    ||||||||||  |||||||||||| |||| |||| |||| ||||||| | ||||||| |||||||||| |||||||||||||| ||||      ||||||    
T  12875444 tgggggtcctgcataaaatagaacccacacattagtaatatttaaatagtggtatttgattttaaatatttgataatgataaacataa------tagtaa 12875351  T
Q  120 ttatta-tttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgata 178  Q
    |||||| |||||| || ||||||||||||||||||  ||||| ||||| |||| ||||||    
T  12875350 ttattattttttactcatgaatatcacttcccataattttaggttatgttggttgtgata 12875291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 242 - 462
Target Start/End: Original strand, 19540725 - 19540945
Alignment:
Q  242 taagagtgttcttat-accttagtctctcttctgtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcatt 340  Q
    ||||||||||||||  ||| ||||| || ||| || |||||||||||| |||| |||||  ||||||||||||||||||||  |||||| ||||| | ||    
T  19540725 taagagtgttcttaagaccatagtcccttttcggtttaatgtcccttcggaattaagaatggtcttaaaaacatagtcccttcgataatatatgtccctt 19540824  T
Q  341 aggaataaaagagtacttttaagatcatagttcct-tcgagaacaataatgtctcatcgaaattaagaatgatcttaacggtatataaatattctttcaa 439  Q
     ||||| |||||||||||||||||||||||| ||| |   ||| || ||||   | | | | ||||||||| ||||||||||||||||||||| ||| ||    
T  19540825 cggaat-aaagagtacttttaagatcatagtccctatttggaataacaatgctccgttggatttaagaatggtcttaacggtatataaatattattt-aa 19540922  T
Q  440 tgtttttctatttgagaagaaat 462  Q
    | |||||||| ||||| ||||||    
T  19540923 tatttttctaattgaggagaaat 19540945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 32 - 189
Target Start/End: Complemental strand, 23094137 - 23093986
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattattttta 131  Q
    |||||||| |||||||| |||| || || ||||||| ||  ||||||||||||||||||||||||||||||||||||      |||||||||||||||||    
T  23094137 ataaaataaaacacacacattagtagtgattaaattacgagatttaattttaaatacttgataatgataaaaataat------agtaattattattttta 23094044  T
Q  132 ttcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaat 189  Q
    ||  |  |||||||||| | || |||||||||||   ||| |||||| ||||||||||    
T  23094043 tttatagatatcacttctcgtaaatttagcttatataggttgtgataagaataagaat 23093986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 277 - 462
Target Start/End: Original strand, 5927798 - 5927984
Alignment:
Q  277 taatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcattaggaataaaagagtacttttaagatcatagttcct- 375  Q
    |||||||||||| |||| |||||  ||||||||| ||||||||||  |||||| ||||| | ||   |||||| ||||||||||||||||||||| |||     
T  5927798 taatgtcccttcggaattaagaatggtcttaaaa-catagtcccttcgataatatatgtcccttcaaaataaa-gagtacttttaagatcatagtcccta 5927895  T
Q  376 tcgagaacaataatgtctcatcgaaattaagaatgatcttaacgg--tatataaatattctttcaatgtttttctatttgagaagaaat 462  Q
    |   ||| || |||||| | |||||||||||||||||||||||||  |||||||| | | ||||||| |||||||||||||| ||||||    
T  5927896 tttggaataacaatgtcccgtcgaaattaagaatgatcttaacggtatatataaaaagtatttcaatatttttctatttgaggagaaat 5927984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 47245170 - 47245082
Alignment:
Q  20 tgggggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataat 108  Q
    ||||| ||||||||||||||||||||||| ||||||| ||||||||| ||| ||||||||||||||||  ||||| |||| ||||||||    
T  47245170 tggggatcctaaataaaatagaacacacacattattagtgtttaaatagcgatatttaattttaaataactgatattgatgaaaataat 47245082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 257 - 521
Target Start/End: Complemental strand, 23093649 - 23093387
Alignment:
Q  257 accttagtctctcttctgtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcattaggaataaaagagtac 356  Q
    ||||||||| || ||| ||||||||||| |||  ||| |||||| ||||||| |||||||||| | |||||||  || | | ||   |||||| |||||     
T  23093649 accttagtccctattccgtataatgtccattcgaaattaagaaaggtcttaagaacatagtccatttgataattcatttcccttcaaaataaa-gagta- 23093552  T
Q  357 ttttaagatcatagttccttcgagaac-aataatgtctcatcgaaattaagaatgatcttaacggtatataaatattctttcaatgtttttctatttgag 455  Q
     |||||||| ||||||||||   | |  ||||||||||| | ||||||||||||||| ||| | ||||||||||||||||||||| |||||||| ||       
T  23093551 -tttaagattatagttcctttttggagtaataatgtctcgttgaaattaagaatgattttaccagtatataaatattctttcaatatttttctactttta 23093453  T
Q  456 aagaaattaaaaagtcaaaatggtggcatcatcatatttgaatgattgtagtgtcatattgatatt 521  Q
    ||||| ||| ||||||| |||||||| |||| ||| ||| |  | | | |||||||||||||||||    
T  23093452 aagaagttataaagtcagaatggtggtatcaccattttttagcggtcgcagtgtcatattgatatt 23093387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 277 - 426
Target Start/End: Complemental strand, 31766386 - 31766238
Alignment:
Q  277 taatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcattaggaataaaagagtacttttaagatcatagttcct- 375  Q
    |||||||||||| |||| |||||  ||||||||| ||||||||||| |||||| ||||| | ||  |||||||| |||||||||||||||||||| |||     
T  31766386 taatgtcccttcggaattaagaatggtcttaaaa-catagtccctgcgataatatatgtcccttcagaataaaa-agtacttttaagatcatagtcccta 31766289  T
Q  376 tcgagaacaataatgtctcatcgaaattaagaatgatcttaacggtatata 426  Q
    |   ||| || |||||| | ||| |||||||||||||||||||||||||||    
T  31766288 tttggaataacaatgtcccgtcggaattaagaatgatcttaacggtatata 31766238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 240 - 462
Target Start/End: Original strand, 5270966 - 5271188
Alignment:
Q  240 aataagagtgttcttat-accttagtctctcttctgtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttca 338  Q
    ||||||||||||||||  ||| ||||| || ||| || |||||||||||| |||| |||||  ||||||||||||||||||||  |||||   |||| |     
T  5270966 aataagagtgttcttaagaccatagtcccttttcggtttaatgtcccttcggaattaagaatggtcttaaaaacatagtcccttcgataa---atgtccc 5271062  T
Q  339 ttaggaataaaagagtacttttaagatcatagttcct-tcgagaacaataatgtctcatcgaaattaagaatgatcttaacgg--tatataaatattctt 435  Q
    ||  |||| |||||||||||||||||||||||| ||| |   ||| || |||||| | ||| ||||||||||||||||||| |  |||||||| | | ||    
T  5271063 ttcagaat-aaagagtacttttaagatcatagtccctatttggaataacaatgtcccgtcggaattaagaatgatcttaacagtatatataaaaagtatt 5271161  T
Q  436 tcaatgtttttctatttgagaagaaat 462  Q
    ||||| |||||||||||| | ||||||    
T  5271162 tcaatatttttctatttgtggagaaat 5271188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 32 - 109
Target Start/End: Complemental strand, 19107606 - 19107529
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataata 109  Q
    ||||||||||||||||| |||| || ||||||||| | ||||||||||||||||||| |||||||||| |||||||||    
T  19107606 ataaaatagaacacacacattagtagtgtttaaatagtggtatttaattttaaatacctgataatgatgaaaataata 19107529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 240 - 462
Target Start/End: Original strand, 31728934 - 31729156
Alignment:
Q  240 aataagagtgttcttat-accttagtctctcttctgtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttca 338  Q
    ||||||||||||||||  ||| ||||| || ||| || ||||||||||||||||| |||||  ||||||||||||||||||||  |||||   |||| |     
T  31728934 aataagagtgttcttaagaccatagtcccttttcggtttaatgtcccttctgaattaagaatggtcttaaaaacatagtcccttcgataa---atgtccc 31729030  T
Q  339 ttaggaataaaagagtacttttaagatcatagttcct-tcgagaacaataatgtctcatcgaaattaagaatgatcttaacgg--tatataaatattctt 435  Q
    ||  |||||||| |||||||||||||||||||| ||| |   ||| || |||||| | ||| ||||||||||||||||| | |  |||||||| | | |     
T  31729031 ttcagaataaaa-agtacttttaagatcatagtccctatttggaataacaatgtcccgtcggaattaagaatgatcttatcagtatatataaaaagtata 31729129  T
Q  436 tcaatgtttttctatttgagaagaaat 462  Q
    ||||| |||||||||||||| ||||||    
T  31729130 tcaatatttttctatttgaggagaaat 31729156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 114 - 189
Target Start/End: Original strand, 39216242 - 39216317
Alignment:
Q  114 tagtaattattatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaat 189  Q
    |||||||||||||||||||||||| |||||||||| |||| ||||| |||||| |||| |||||| ||||||||||    
T  39216242 tagtaattattatttttattcgtgtatatcacttcgcataaatttatcttatgttggttgtgataagaataagaat 39216317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 277 - 462
Target Start/End: Complemental strand, 51698434 - 51698246
Alignment:
Q  277 taatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttc-attaggaataaaagagtacttttaagatcatagttcct 375  Q
    |||||||||||| |||| |||||  ||||||||||||||||||||  |||||| ||||| | |||  ||||||  |||||||||||||||| |||| |||    
T  51698434 taatgtcccttcggaattaagaatggtcttaaaaacatagtcccttcgataatatatgtcccattcagaataat-gagtacttttaagatcgtagtccct 51698336  T
Q  376 -tcgagaacaataatgtctcatcgaaattaagaatgatcttaacggta--tataaatattctttcaatgtttttctatttgagaagaaat 462  Q
     |   ||| || |||||| |  || |||||||||||||||||||||||  |||||| | | ||||||| |||||||||||||| ||||||    
T  51698335 atttggaataacaatgtcccgccggaattaagaatgatcttaacggtatatataaaaagtatttcaatatttttctatttgaggagaaat 51698246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 277 - 496
Target Start/End: Complemental strand, 55252178 - 55251962
Alignment:
Q  277 taatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcattaggaataaaagagtacttttaagatcatagttcctt 376  Q
    ||||||||||||  ||| | |||  ||||||||||||||| || |  |||||| || || | || |||||||| || |||| ||||||||||||| ||||    
T  55252178 taatgtcccttcgaaattaggaatggtcttaaaaacatagcccattcgataatataagtcccttcggaataaa-gaatactattaagatcatagtccctt 55252080  T
Q  377 cgag-aacaataatgtctcatcgaaattaagaatgatcttaacggtatataaatattctttcaatgtttttctatttgagaagaaattaaaaagtcaaaa 475  Q
       | || ||||||||| | ||  ||||||||||||| |||||||||||||||||||||||| || |||   || ||||| ||||||||||||||  |||    
T  55252079 tttggaataataatgtcccgtcagaattaagaatgattttaacggtatataaatattctttcgatattt---taattgaggagaaattaaaaagtggaaa 55251983  T
Q  476 tggtggcatcatcatatttga 496  Q
    |||||| | || |||||||||    
T  55251982 tggtggtaacaccatatttga 55251962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 308 - 461
Target Start/End: Complemental strand, 19102463 - 19102308
Alignment:
Q  308 aaaacatagtccctgtgataatgtatgttcattaggaataaaagagtacttttaagatcatagttcct-tcgagaacaataatgtctcatcgaaattaag 406  Q
    ||||||||||||||  |||||| ||||| |||| | |||||| |||||||||||||||||| || ||| |   ||| || ||||||   |||||||||||    
T  19102463 aaaacatagtcccttcgataatatatgtccattcgaaataaa-gagtacttttaagatcattgtccctatttggaataacaatgtcctgtcgaaattaag 19102365  T
Q  407 aatgatcttaacggta--tataaatattctttcaatgtttttctatttgagaagaaa 461  Q
    ||||||||||||||||  |||||| | | ||||||| |||||||||||||| |||||    
T  19102364 aatgatcttaacggtatatataaaaagtatttcaatatttttctatttgaggagaaa 19102308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 32 - 109
Target Start/End: Complemental strand, 19102994 - 19102917
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataata 109  Q
    ||||||||||||||||| |||| || ||||||||| | | ||||||||||||||||| |||||||||| |||||||||    
T  19102994 ataaaatagaacacacacattaatagtgtttaaatagtgatatttaattttaaatacctgataatgatgaaaataata 19102917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 242 - 426
Target Start/End: Original strand, 37264110 - 37264292
Alignment:
Q  242 taagagtgttcttat-accttagtctctcttctgtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcatt 340  Q
    ||||||||||||||  ||| ||||| || ||| || |||||||||||| |||| |||||  ||||||||||||||||||||  |||||   |||| | ||    
T  37264110 taagagtgttcttaagaccatagtcgcttttcagtttaatgtcccttcggaattaagaatggtcttaaaaacatagtcccttcgataa---atgtccctt 37264206  T
Q  341 aggaataaaagagtacttttaagatcatagttcct-tcgagaacaataatgtctcatcgaaattaagaatgatcttaacggtatata 426  Q
      |||| ||||| |||||||||||||||||| ||| |   ||| || |||||| | ||| |||||||||||||||||||||||||||    
T  37264207 cagaat-aaagaatacttttaagatcatagtccctatttggaagaacaatgtcccgtcggaattaagaatgatcttaacggtatata 37264292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 277 - 462
Target Start/End: Complemental strand, 19107124 - 19106938
Alignment:
Q  277 taatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcattaggaataaaagagtacttttaagatcatagttcct- 375  Q
    ||||||||||||  ||| |||||  ||||||||| ||||||||||  |||||| |||||   || |||||||| ||||||||||||||||||||  |||     
T  19107124 taatgtcccttcgaaattaagaatggtcttaaaa-catagtcccttcgataatatatgtctcttcggaataaa-gagtacttttaagatcatagccccta 19107027  T
Q  376 tcgagaacaataatgtctcatcgaaattaagaatgatcttaacggta--tataaatattctttcaatgtttttctatttgagaagaaat 462  Q
    |   ||| || |||||| | ||| |||||| ||||||||||||||||  |||||| | | ||||||| |||||||||||||| ||||||    
T  19107026 tttggaataacaatgtcccgtcggaattaaaaatgatcttaacggtatatataaaaaatatttcaatatttttctatttgaggagaaat 19106938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 457 - 521
Target Start/End: Complemental strand, 4551321 - 4551257
Alignment:
Q  457 agaaattaaaaagtcaaaatggtggcatcatcatatttgaatgattgtagtgtcatattgatatt 521  Q
    ||||||||||||||||||||||||| |||||||||||||| || | |||||| || |||||||||    
T  4551321 agaaattaaaaagtcaaaatggtggtatcatcatatttgagtggtcgtagtgccacattgatatt 4551257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 8028216 - 8028292
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataat 108  Q
    ||||||||||||||||| |||| || ||||||||| |  |||||||||||||||||  | |||||||||||||||||    
T  8028216 ataaaatagaacacacacattagtagtgtttaaatagttgtatttaattttaaataactaataatgataaaaataat 8028292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 35 - 171
Target Start/End: Complemental strand, 16949026 - 16948895
Alignment:
Q  35 aaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattatttttattc 134  Q
    ||||||||||||||||||| || |||| |||||   ||||||| |||| |||||||||||||||||||||    || | |||||||||||| ||||| ||    
T  16949026 aaatagaacacacatattagtagtgttcaaattcttgtatttagttttgaatacttgataatgataaaaa----ag-aatagtaattattagttttactc 16948932  T
Q  135 gtgaatatcacttcccatacatttagcttatggtggt 171  Q
     |  |||||| ||||||||  ||||||||||| ||||    
T  16948931 attgatatcatttcccataattttagcttatgttggt 16948895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 275 - 369
Target Start/End: Original strand, 1150946 - 1151039
Alignment:
Q  275 tataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcattaggaataaaagagtacttttaagatcata 369  Q
    |||||||||||||| |||| |||||   |||||| | |||||||||| ||||||| ||||| | || | ||| ||||||||||||||||||||||    
T  1150946 tataatgtcccttcggaattaagaatgatcttaagagcatagtccctttgataatttatgtaccttcgtaat-aaagagtacttttaagatcata 1151039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 242 - 420
Target Start/End: Original strand, 37259410 - 37259586
Alignment:
Q  242 taagagtgttcttat-accttagtctctcttctgtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcatt 340  Q
    ||||||||||||||  ||| ||||| || ||| || |||||||||||| |||| |||||  ||||||||||||||||||||  |||||   |||| | ||    
T  37259410 taagagtgttcttaagaccatagtcgcttttcggtttaatgtcccttcggaattaagaatggtcttaaaaacatagtcccttcgataa---atgtccctt 37259506  T
Q  341 aggaataaaagagtacttttaagatcatagttcct-tcgagaacaataatgtctcatcgaaattaagaatgatcttaacgg 420  Q
      |||| ||||| || ||||||||||||||| ||| |   ||| || |||||| | ||| |||||||||||||||||||||    
T  37259507 cagaat-aaagaatatttttaagatcatagtccctatttggaagaacaatgtcccgtcggaattaagaatgatcttaacgg 37259586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 5927363 - 5927431
Alignment:
Q  116 gtaattattatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataa 185  Q
    |||||||||||||| ||||| ||||||||||| ||||| |||||||||||| || | |||||| ||||||    
T  5927363 gtaattattatttt-attcgagaatatcactttccataaatttagcttatgatgattgtgataagaataa 5927431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 429 - 521
Target Start/End: Complemental strand, 15134531 - 15134438
Alignment:
Q  429 tattctttcaatgttttt-ctatttgagaagaaattaaaaagtcaaaatggtggcatcatcatatttgaatgattgtagtgtcatattgatatt 521  Q
    |||||||||||| ||||| |||  ||||||||||||| ||||  |||||||||| |||| ||||||||| || |  ||||| ||||||||||||    
T  15134531 tattctttcaatattttttctacctgagaagaaattataaagataaaatggtggtatcaccatatttgagtggtcctagtggcatattgatatt 15134438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 19907317 - 19907269
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaatt 80  Q
    ||||||||||||||||| ||||  | |||||||||||||||||||||||    
T  19907317 ataaaatagaacacacacattagcagtgtttaaattgcggtatttaatt 19907269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 109
Target Start/End: Original strand, 48275930 - 48275981
Alignment:
Q  58 tgtttaaattgcggtatttaattttaaatacttgataatgataaaaataata 109  Q
    ||||||||| | |||||||| |||||||||||| |||||||| |||||||||    
T  48275930 tgtttaaatagtggtatttatttttaaatacttaataatgatgaaaataata 48275981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 32 - 106
Target Start/End: Complemental strand, 12878929 - 12878856
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaata 106  Q
    ||||||||||||| ||| |||| || |||||||||   | |||||| || |||||||||||||||||||||||||    
T  12878929 ataaaatagaacatacacattaatagtgtttaaataatgatattta-ttataaatacttgataatgataaaaata 12878856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 264 - 334
Target Start/End: Original strand, 15805208 - 15805278
Alignment:
Q  264 tctctcttctgtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatg 334  Q
    ||||| ||| ||||||||||||||| |||| ||||| | |||||| | |||||||||| ||||||| ||||    
T  15805208 tctctattcggtataatgtcccttcggaattaagaataatcttaatagcatagtccctttgataatttatg 15805278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 61 - 103
Target Start/End: Complemental strand, 16958305 - 16958263
Alignment:
Q  61 ttaaattgcggtatttaattttaaatacttgataatgataaaa 103  Q
    ||||||||  |||||||||||||||||||| ||||||||||||    
T  16958305 ttaaattgttgtatttaattttaaatacttcataatgataaaa 16958263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 12823099 - 12823143
Alignment:
Q  190 aagaattcaattgaatttcttatttttccttcattcaaatacaat 234  Q
    |||||||  |||||||||||||| |||||||||||||||| ||||    
T  12823099 aagaatttgattgaatttcttatatttccttcattcaaatccaat 12823143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 138; Significance: 7e-72; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 20 - 239
Target Start/End: Original strand, 12181808 - 12182023
Alignment:
Q  20 tgggggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaa 119  Q
    ||||||||| | ||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||   ||||| |||    
T  12181808 tgggggtcccacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaataa---tagtaataa 12181904  T
Q  120 ttattatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttcct 219  Q
    | ||| |||||||||||||||||||||||| ||| ||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||| ||||||    
T  12181905 tcattttttttattcgtgaatatcacttccaataaatttagcttatggtggttgtgataagaataagaataagaattcaattgaa-ttcttatatttcct 12182003  T
Q  220 tcattcaaatacaatgagtt 239  Q
    || ||||||| |||||||||    
T  12182004 tcgttcaaatccaatgagtt 12182023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 22 - 239
Target Start/End: Complemental strand, 12257060 - 12256855
Alignment:
Q  22 ggggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaatt 121  Q
    ||||||| | ||||||||||||||||  |||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||      |||||||    
T  12257060 ggggtcccacataaaatagaacacacgcattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataat------agtaatt 12256967  T
Q  122 attatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttccttc 221  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| |||      ||||||||| ||||||||||||||||||||||||||||||    
T  12256966 attatttttattcgtgaatatcacttcccataaatttagcttatggtggttgtg------ataagaataggaattcaattgaatttcttatttttccttc 12256873  T
Q  222 attcaaatacaatgagtt 239  Q
    |||||||| |||||||||    
T  12256872 attcaaatccaatgagtt 12256855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 32 - 240
Target Start/End: Complemental strand, 21672233 - 21672032
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattattttta 131  Q
    |||||||||| |||||| |||| || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||      |||||||||||||    
T  21672233 ataaaatagagcacacacattagtactgtttaaattgcggtatttaattttatatacttgataatgataaaaataatagta------attattattttta 21672140  T
Q  132 ttcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttccttcattcaaatac 231  Q
    |||||||||||||||||||||| ||||| ||||||||||| |||||| ||||||||||||||||| ||||||||||||||| |||| ||| ||||||| |    
T  21672139 ttcgtgaatatcacttcccata-atttaccttatggtggttgtgataagaataagaataagaatttaattgaatttcttatatttcattccttcaaatcc 21672041  T
Q  232 aatgagtta 240  Q
    |||||||||    
T  21672040 aatgagtta 21672032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 257 - 521
Target Start/End: Original strand, 10387915 - 10388178
Alignment:
Q  257 accttagtctctcttctgtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcattaggaataaaagagtac 356  Q
    |||||||||  | ||| ||||||||||||||| |||| |||||||||||||||||||||||  |   |||||||||||  | ||  |||||||| |||||    
T  10387915 accttagtccttattcggtataatgtcccttcggaattaagaaaagtcttaaaaacatagtttcgtcgataatgtatgccccttcagaataaaa-agtac 10388013  T
Q  357 ttttaagatcatagttccttcgagaacaataatgtctcatcgaaattaagaatgatcttaacggtatataaatattctttcaatgtttttctatttgaga 456  Q
    ||||||||  ||||| ||||   ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||| |||||     
T  10388014 ttttaagaatatagtcccttttggaacaataatgtctcatcggaattgagaatgatcttaacggtatataaatattctttcaatatttttctaattgagg 10388113  T
Q  457 agaaattaaaaagtcaaaatggtggcatcatcatatttgaatgattgtagtgtcatattgatatt 521  Q
    ||||||||||||||| ||||||||| |||| ||||||||| |||| |||||| ||||||||||||    
T  10388114 agaaattaaaaagtcgaaatggtggtatcaccatatttgagtgatcgtagtgccatattgatatt 10388178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 32 - 239
Target Start/End: Original strand, 10392157 - 10392353
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattattttta 131  Q
    |||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||| ||||||| || |      ||||||||||||||||    
T  10392157 ataaaatagaacacacatgttatcagtgtttaaattgcggtatttaattttaaatacttgataataataaaaaaaaaa-----tgtaattattattttta 10392251  T
Q  132 ttcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttccttcattcaaatac 231  Q
    ||| |||||||||||||||||| |||||| |||||||| | |||      ||||||||||||||||||||||||||||||| |||||||||||||||| |    
T  10392252 ttcatgaatatcacttcccataaatttaggttatggtgattgtg------ataagaataagaattcaattgaatttcttatctttccttcattcaaatcc 10392345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 22 - 239
Target Start/End: Complemental strand, 3046612 - 3046407
Alignment:
Q  22 ggggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaatt 121  Q
    ||||||| | ||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||      || | | |    
T  3046612 ggggtcccacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaataa------taattact 3046519  T
Q  122 attatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttccttc 221  Q
    || ||||||||||||||||||||||||| ||| ||||| ||||||||||| |||      |||||||||||||||||||||||| |||||| ||||||||    
T  3046518 ataatttttattcgtgaatatcacttcctataaatttaacttatggtggttgtg------ataagaataagaattcaattgaatgtcttatctttccttc 3046425  T
Q  222 attcaaatacaatgagtt 239  Q
    ||||||||  ||||||||    
T  3046424 attcaaatctaatgagtt 3046407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 20 - 224
Target Start/End: Original strand, 42625634 - 42625831
Alignment:
Q  20 tgggggtcctaaataaaatagaacacacatattattaatgtttaaattgcggt-----atttaattttaaatacttgataatgataaaaataatagtagt 114  Q
    ||||||||| | |||||||||||| |||| |||| || |||||||||||||||     |||||||||||||||||||||||||||||||||||      |    
T  42625634 tgggggtcccacataaaatagaactcacacattagtagtgtttaaattgcggtgcagtatttaattttaaatacttgataatgataaaaataa------t 42625727  T
Q  115 agtaattattatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttattt 214  Q
    ||||||||||||||||||||| ||||||||||| ||||| ||||| ||||||||||| |||      ||||||||||||||| |||| |||||||||| |    
T  42625728 agtaattattatttttattcgagaatatcactttccataaatttaacttatggtggttgtg------ataagaataagaatttaattaaatttcttatat 42625821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 58 - 234
Target Start/End: Complemental strand, 8269302 - 8269138
Alignment:
Q  58 tgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattatttttattcgtgaatatcacttcccatacatt 157  Q
    |||||||| |||| |||||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||| ||||| |||    
T  8269302 tgtttaaactgcgatatttaattttaaatacttgataatgataaaaataatagta------attattatttttattcgtgaatatcactttccataaatt 8269209  T
Q  158 tagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttccttcattcaaatacaat 234  Q
    || ||||||||||| |||      ||||| ||||||||| |||| |||||||||| |||||||||||||||| ||||    
T  8269208 taacttatggtggttgtg------ataaggataagaatttaattaaatttcttatatttccttcattcaaatccaat 8269138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 26342247 - 26342089
Alignment:
Q  20 tgggggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaa 119  Q
    ||||||||| | ||||||||||||||||| |||| || ||||||||||| | |||||||||||||||||||||||||||||||||||||      |||||    
T  26342247 tgggggtcccacataaaatagaacacacacattagtagtgtttaaattgtgatatttaattttaaatacttgataatgataaaaataat------agtaa 26342154  T
Q  120 ttattatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataa 185  Q
    |||||| ||||||||| ||||||||||| ||||| ||||||||||||||||| |||||| ||||||    
T  26342153 ttatta-ttttattcgagaatatcactttccataaatttagcttatggtggttgtgataagaataa 26342089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 32 - 234
Target Start/End: Complemental strand, 3880999 - 3880806
Alignment:
Q  32 ataaaatagaacacacatattattaat---gtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattattt 128  Q
    ||||||||||||||||| || |||| |   | |||||||| | |||||||||||||||||||||||||||||||||||||||||      ||||||||||    
T  3880999 ataaaatagaacacacacatcattagtagtgcttaaattgtgatatttaattttaaatacttgataatgataaaaataatagta------attattattt 3880906  T
Q  129 ttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttccttcattcaaa 228  Q
    ||||| ||||||||||||||||||| |||||||||||| | || |||      |||||||||| |||| ||||||||||||||| |||| ||||||||||    
T  3880905 ttatttgtgaatatcacttcccataaatttagcttatgattgttgtg------ataagaataataatttaattgaatttcttatatttcattcattcaaa 3880812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 32 - 239
Target Start/End: Original strand, 10387417 - 10387614
Alignment:
Q  32 ataaaatagaacacacatattattaa-tgtttaaattgcggtatttaattttaaatacttgataatgataaa-aataatagtagtagtaattattatttt 129  Q
    ||||||||||||||||||||||  |  ||||||||||| |||||||||||||||||| |||||||||||||| || ||||||     | |||||  ||||    
T  10387417 ataaaatagaacacacatattagcaggtgtttaaattgtggtatttaattttaaatatttgataatgataaagaaaaatagt----tttattat--tttt 10387510  T
Q  130 tattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttccttcattcaaat 229  Q
    | |||||||||||||||||||||| |||||||||||||| || |||      ||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  10387511 ttttcgtgaatatcacttcccataaatttagcttatggttgttgtg------ataagaataagaattcaattgaatttcttatcttttcttcattcaaat 10387604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 45 - 229
Target Start/End: Complemental strand, 12800405 - 12800233
Alignment:
Q  45 cacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattatttttattcgtgaatatca 144  Q
    |||| |||| || |||||||||||| ||||||||||||||||||||||||||||||||||||||      |||||||||||||||||||||  ||||| |    
T  12800405 cacacattagtagtgtttaaattgcagtatttaattttaaatacttgataatgataaaaataat------agtaattattatttttattcgaaaatataa 12800312  T
Q  145 cttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttccttcattcaaat 229  Q
    ||| ||||| |||||| |||| ||||| ||      ||||||||||||||||  |||||||||||||  ||||||||||||||||    
T  12800311 ctttccataaatttaggttatagtggttgt------aataagaataagaattttattgaatttcttaaatttccttcattcaaat 12800233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 32 - 185
Target Start/End: Complemental strand, 4931251 - 4931105
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattattttta 131  Q
    ||||||||||||||||| |||| || ||||||||||| ||||||||||||||||||||||||| |||||||||||||      ||||||||||| |||||    
T  4931251 ataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgatagtgataaaaataat------agtaattatta-tttta 4931159  T
Q  132 ttcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataa 185  Q
    |  | ||||||||||| ||||| |||||| |||||||||| |||||| ||||||    
T  4931158 tctgagaatatcactttccataaatttagtttatggtggttgtgataagaataa 4931105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 32 - 237
Target Start/End: Original strand, 9814943 - 9815139
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaa-ttttaaatacttgataatgataaaaataatagtagtagtaattattattttt 130  Q
    ||||||||||||||| | |||| || | ||||||||||||||||||| |||||||||||||||||| || |||||||      |||||||||||||||||    
T  9814943 ataaaatagaacacatacattagtagtttttaaattgcggtatttaatttttaaatacttgataataatgaaaataa------tagtaattattattttt 9815036  T
Q  131 attcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttccttcattcaaata 230  Q
    |||| | ||||||||||| |||| |||||||||| | |||| |||||| ||||||    ||||||||||   | |||| ||||||| ||||||||| ||     
T  9815037 attcatcaatatcacttctcataaatttagcttacgttggttgtgataagaataa----aagaattcaaccaagtttcctatttttacttcattcatatc 9815132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 32 - 237
Target Start/End: Original strand, 10716868 - 10717064
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaa-ttttaaatacttgataatgataaaaataatagtagtagtaattattattttt 130  Q
    ||||||||||||||| | |||| || | ||||||||||||||||||| |||||||||||||||||| || |||||||      |||||||||||||||||    
T  10716868 ataaaatagaacacatacattagtagtttttaaattgcggtatttaatttttaaatacttgataataatgaaaataa------tagtaattattattttt 10716961  T
Q  131 attcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttccttcattcaaata 230  Q
    |||| | ||||||||||| |||| |||||||||| | |||| |||||| ||||||    ||||||||||   | |||| ||||||| ||||||||| ||     
T  10716962 attcatcaatatcacttctcataaatttagcttacgttggttgtgataagaataa----aagaattcaaccaagtttcctatttttacttcattcatatc 10717057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 403 - 521
Target Start/End: Complemental strand, 27238645 - 27238527
Alignment:
Q  403 taagaatgatcttaacggtatataaatattctttcaatgtttttctatttgagaagaaattaaaaagtcaaaatggtggcatcatcatatttgaatgatt 502  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||| ||||| ||||||||||| ||  ||||||||| |||| ||||||||| || |     
T  27238645 taagaatgatcttaaaggtatataaatattctttcaatatttttctaattgaggagaaattaaaaggtggaaatggtggtatcaccatatttgagtggtc 27238546  T
Q  503 gtagtgtcatattgatatt 521  Q
    |||||| ||||||||||||    
T  27238545 gtagtgccatattgatatt 27238527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 114 - 234
Target Start/End: Complemental strand, 27239107 - 27238993
Alignment:
Q  114 tagtaattattatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatt 213  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |||      |||| |||||||||| |||||||||||||||     
T  27239107 tagtaattattatttttattcgtgaatatcacttcccataaatttagcttatggttgttgtg------ataacaataagaatttaattgaatttcttata 27239014  T
Q  214 tttccttcattcaaatacaat 234  Q
    |||| ||||||||||| ||||    
T  27239013 tttcattcattcaaattcaat 27238993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 240 - 521
Target Start/End: Complemental strand, 3046123 - 3045840
Alignment:
Q  240 aataagagtgttcttat-accttagtctctcttctgta-taatgtcccttctgaatcaagaaaa-gtcttaaaaacatagtccctgtgataatgtatgtt 336  Q
    ||||||||||||| ||  |||||||||  | ||||||| |||||||||||   ||| ||||||| ||||||||||||||||| ||  | ||||||||||     
T  3046123 aataagagtgttcctaagaccttagtccttgttctgtaataatgtccctttgaaattaagaaaatgtcttaaaaacatagtctcttcggtaatgtatgtc 3046024  T
Q  337 cattaggaataaaagagtacttttaagatcatagttccttcgagaacaataatgtctcatcgaaattaagaatgatcttaacggtatataaatattcttt 436  Q
    | || ||||||||| || || || ||||| | ||| ||||   |||||||||| ||    || |||||| |||||||||||  ||||||||||||| |||    
T  3046023 ccttcggaataaaa-agaacattcaagattacagtcccttttggaacaataatatcctgacggaattaataatgatcttaatagtatataaatatttttt 3045925  T
Q  437 caatgtttttctatttgagaagaaattaaaaagtcaaaatggtggcatcatcatatttgaatgattgtagtgtcatattgatatt 521  Q
    |||| ||||| || ||||  |||||||||||||| |||||||| | |||| ||||||||| || | |||||||||||||||||||    
T  3045924 caatatttttttacttgatgagaaattaaaaagttaaaatggtagtatcaccatatttgagtggtcgtagtgtcatattgatatt 3045840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 277 - 432
Target Start/End: Complemental strand, 8268808 - 8268653
Alignment:
Q  277 taatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcattaggaataaaagagtacttttaagatcatagttcct- 375  Q
    |||||||||||| |||| |||||  |||||||||||||||||| |  |||||| ||||| | || ||||| |||||||||||||||||||||||| |||     
T  8268808 taatgtcccttcggaattaagaatggtcttaaaaacatagtccattcgataatatatgtcccttcggaat-aaagagtacttttaagatcatagtcccta 8268710  T
Q  376 tcgagaacaataatgtctcatcgaaattaagaatgatcttaacggtatataaatatt 432  Q
    |   ||| || |||||||| ||| |||||||||||||||||||||||||||||||||    
T  8268709 tttggaataacaatgtctcgtcggaattaagaatgatcttaacggtatataaatatt 8268653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 44 - 166
Target Start/End: Complemental strand, 16373364 - 16373248
Alignment:
Q  44 acacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattatttttattcgtgaatatc 143  Q
    ||||| |||| || |||||||||||| ||| |||||||||||||| |||||| |||||||||||      |||| ||||||||||||||||||| |||||    
T  16373364 acacacattagtagtgtttaaattgcagtagttaattttaaatacctgataacgataaaaataa------tagtcattattatttttattcgtgtatatc 16373271  T
Q  144 acttcccatacatttagcttatg 166  Q
    |||| ||||| ||||||||||||    
T  16373270 actttccataaatttagcttatg 16373248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 348 - 521
Target Start/End: Complemental strand, 21671642 - 21671480
Alignment:
Q  348 aaagagtacttttaagatcatagttccttcgagaacaataatgtctcatcgaaattaagaatgatcttaacggtatataaatattctttcaatgtttttc 447  Q
    ||||||||||||||||||||| || ||||    || ||||||||  | ||| ||||||||||||||||||   ||||||||||           ||||||    
T  21671642 aaagagtacttttaagatcatggtcccttttgaaataataatgttccgtcggaattaagaatgatcttaatactatataaata-----------tttttc 21671554  T
Q  448 tatttgagaagaaattaaaaagtcaaaatggtggcatcatcatatttgaatgattgtagtgtcatattgatatt 521  Q
    |||||||| ||||||||||||||||||||||||| |||| ||||||||| || | |||||||||||||||||||    
T  21671553 tatttgagtagaaattaaaaagtcaaaatggtggtatcaccatatttgagtggtcgtagtgtcatattgatatt 21671480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 32 - 189
Target Start/End: Original strand, 27246616 - 27246765
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattattttta 131  Q
    ||||||||||||||||||  || || ||||||||||||| |||||| |  |||||||||||||||||||||| |||      || | |||||||||||||    
T  27246616 ataaaatagaacacacat--taatagtgtttaaattgcgctatttattcataaatacttgataatgataaaactaa------taatcattattattttta 27246707  T
Q  132 ttcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaat 189  Q
    |||||| |||||||||| |||| |||||||||||| |||| | ||||  |||||||||    
T  27246708 ttcgtggatatcacttctcataaatttagcttatgttggttgcgataaaaataagaat 27246765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 32 - 109
Target Start/End: Original strand, 13313382 - 13313459
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataata 109  Q
    ||||||||||||||||| |||| || ||||||||| | |||||||||||||||||||||||||||||| |||||||||    
T  13313382 ataaaatagaacacacacattagtagtgtttaaatagtggtatttaattttaaatacttgataatgatgaaaataata 13313459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 114 - 229
Target Start/End: Complemental strand, 2595778 - 2595669
Alignment:
Q  114 tagtaattattatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatt 213  Q
    ||||||||||| |||||||||| ||||||||||||||||| | ||||||||||||||  |||      ||||||| ||||||| |||||||||||||||     
T  2595778 tagtaattattctttttattcgagaatatcacttcccataaacttagcttatggtggctgtg------ataagaaaaagaatttaattgaatttcttata 2595685  T
Q  214 tttccttcattcaaat 229  Q
    ||| ||||||||||||    
T  2595684 ttttcttcattcaaat 2595669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 33 - 107
Target Start/End: Original strand, 23247627 - 23247701
Alignment:
Q  33 taaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataa 107  Q
    |||||||||| ||| | |||| || |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  23247627 taaaatagaaaacaaacattagtagtgtttaaattacggtatttaattttaaatacttgataatgataaaaataa 23247701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 114 - 234
Target Start/End: Original strand, 23247884 - 23247998
Alignment:
Q  114 tagtaattattatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatt 213  Q
    ||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||| | |||      |||||||||| |||| |||||||||| ||||     
T  23247884 tagtaattattatttttattcgtaaatatcacttcccataaattgagcttatggtgattgtg------ataagaataaaaatttaattgaattttttata 23247977  T
Q  214 tttccttcattcaaatacaat 234  Q
    |||| ||| ||||||| ||||    
T  23247978 tttcattcgttcaaattcaat 23247998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 26286214 - 26286303
Alignment:
Q  20 tgggggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataata 109  Q
    ||||||||| | ||||||||||||||||| |||| || ||||||||| | ||||||||||||||||||  |||||||||| |||||||||    
T  26286214 tgggggtcccacataaaatagaacacacacattagtagtgtttaaatagtggtatttaattttaaataactgataatgatgaaaataata 26286303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 48 - 165
Target Start/End: Original strand, 6590097 - 6590208
Alignment:
Q  48 atattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattatttttattcgtgaatatcactt 147  Q
    |||||| || |||||||||||   |||||||||||||||||||||||| | |||||||||      |||| ||||||||||||||||||| |||||| ||    
T  6590097 atattagtagtgtttaaattgtattatttaattttaaatacttgataaagctaaaaataa------tagtcattattatttttattcgtggatatcattt 6590190  T
Q  148 cccatacatttagcttat 165  Q
    |||||| |||||| ||||    
T  6590191 cccataaatttagtttat 6590208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 277 - 426
Target Start/End: Complemental strand, 26341722 - 26341574
Alignment:
Q  277 taatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcattaggaataaaagagtacttttaagatcatagttcct- 375  Q
    |||||||||||| |||| |||||  |||||||||  ||||||||||||||||| ||||| | ||  ||||||| || |||||||||||||||||| |||     
T  26341722 taatgtcccttcggaattaagaatggtcttaaaat-atagtccctgtgataatatatgtcccttcagaataaa-gaatacttttaagatcatagtcccta 26341625  T
Q  376 tcgagaacaataatgtctcatcgaaattaagaatgatcttaacggtatata 426  Q
    |   ||| || |||||| | ||| |||||||||||||||||||||||||||    
T  26341624 tttggaataacaatgtcccgtcggaattaagaatgatcttaacggtatata 26341574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 243 - 462
Target Start/End: Original strand, 42626135 - 42626356
Alignment:
Q  243 aagagtgttcttat-accttagtctctcttctgtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcatta 341  Q
    |||||||||||||  ||| ||||| || ||| || |||||||||| | |||| |||||  ||||||||| ||||||||||   ||||| ||||| | ||     
T  42626135 aagagtgttcttaagaccatagtcccttttcggtttaatgtccctccggaattaagaatggtcttaaaa-catagtcccttcaataatatatgtcccttc 42626233  T
Q  342 ggaataaaagagtacttttaagatcatagttcct-tcgagaacaataatgtctcatcgaaattaagaatgatcttaacgg--tatataaatattctttca 438  Q
     ||||||| ||||||||||||||||||| | ||| |   ||| || |||||| | ||| |||||||||||||||||||||  |||||||| | | |||||    
T  42626234 agaataaa-gagtacttttaagatcatattccctatttggaataacaatgtcccgtcggaattaagaatgatcttaacggtatatataaaaagtatttca 42626332  T
Q  439 atgtttttctatttgagaagaaat 462  Q
    || |||||||||||||| ||||||    
T  42626333 atatttttctatttgaggagaaat 42626356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 381 - 496
Target Start/End: Original strand, 3356767 - 3356881
Alignment:
Q  381 aacaataatgtctcatcgaaattaagaatgatcttaacggtatataaatattctttcaatgtttttctatttgagaagaaattaaaaagtcaaaatggtg 480  Q
    ||||| ||| |||| ||| ||||||||||||||||||| ||||||||||||| |||  || ||||| || ||||| | ||||||||||||  ||||||||    
T  3356767 aacaacaatatctcgtcggaattaagaatgatcttaaccgtatataaatatt-tttttatatttttttaattgaggataaattaaaaagttgaaatggtg 3356865  T
Q  481 gcatcatcatatttga 496  Q
    | |||| |||||||||    
T  3356866 gtatcaccatatttga 3356881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 348 - 462
Target Start/End: Original strand, 13313883 - 13314000
Alignment:
Q  348 aaagagtacttttaagatcatagttcct-tcgagaacaataatgtctcatcgaaattaagaatgatcttaacggtatat--aaatattctttcaatgttt 444  Q
    |||||||||||||||||||||||  ||| |   ||| || |||||| | ||||||||||||||||||||||||||||||  ||| ||| ||| ||| |||    
T  13313883 aaagagtacttttaagatcatagaccctatttggaataacaatgtcccgtcgaaattaagaatgatcttaacggtatataaaaaaattattttaatattt 13313982  T
Q  445 ttctatttgagaagaaat 462  Q
    ||||||||||| ||||||    
T  13313983 ttctatttgaggagaaat 13314000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 22 - 105
Target Start/End: Complemental strand, 4580503 - 4580420
Alignment:
Q  22 ggggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaat 105  Q
    ||||||| | ||||||||||||||||| |||| || |||||| || | ||||||||||| ||||||| |||||||||| |||||    
T  4580503 ggggtcccatataaaatagaacacacacattagtagtgtttatatagtggtatttaattctaaatacctgataatgatgaaaat 4580420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 387 - 462
Target Start/End: Complemental strand, 12799825 - 12799748
Alignment:
Q  387 aatgtctcatcgaaattaagaatgatcttaacgg--tatataaatattctttcaatgtttttctatttgagaagaaat 462  Q
    |||||| | |||||||||||||||||||||| ||  |||||||| | | |||||||||||||||||||||| ||||||    
T  12799825 aatgtcccgtcgaaattaagaatgatcttaatggtatatataaaaagtatttcaatgtttttctatttgaggagaaat 12799748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 73 - 189
Target Start/End: Original strand, 23152177 - 23152287
Alignment:
Q  73 atttaattttaaatacttgataatgataaaaataatagtagtagtaattattatttttattcgtgaatatcacttcccatacatttagcttatggtggta 172  Q
    ||||||||||||| |||||||||||||||||||||      || | |||||||||||||| | ||||||||| || ||||| |||||| ||||| || |     
T  23152177 atttaattttaaaaacttgataatgataaaaataa------taattattattatttttatccatgaatatcattttccataaatttagtttatgatgatt 23152270  T
Q  173 gtgataggaataagaat 189  Q
     ||||| ||||||||||    
T  23152271 atgataagaataagaat 23152287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 112 - 239
Target Start/End: Complemental strand, 23319872 - 23319750
Alignment:
Q  112 agtagtaattattatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttctta 211  Q
    |||||||||||||| ||||||||||| ||||||||| ||||| |||| | ||||| |||| |||      | |||||||||| ||||| ||| |||| ||    
T  23319872 agtagtaattattacttttattcgtggatatcacttgccataaatttggtttatgttggttgtg------acaagaataagagttcaactgagtttccta 23319779  T
Q  212 t-ttttccttcattcaaatacaatgagtt 239  Q
    | |||||||||||||| || |||||||||    
T  23319778 tcttttccttcattcatatccaatgagtt 23319750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 62 - 107
Target Start/End: Original strand, 44508427 - 44508472
Alignment:
Q  62 taaattgcggtatttaattttaaatacttgataatgataaaaataa 107  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||    
T  44508427 taaattgtggtatttaattttaaatatttgataatgataaaaataa 44508472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 114 - 185
Target Start/End: Original strand, 44509594 - 44509664
Alignment:
Q  114 tagtaattattatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataa 185  Q
    |||||||||||||||| ||| | ||||||||||| ||||| |||||||||| |||||| |||||| ||||||    
T  44509594 tagtaattattatttt-atttgagaatatcactttccataaatttagcttacggtggttgtgataagaataa 44509664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 432
Target Start/End: Complemental strand, 30258508 - 30258460
Alignment:
Q  384 aataatgtctcatcgaaattaagaatgatcttaacggtatataaatatt 432  Q
    ||||||||| | |||||||||| |||||||||||| |||||||||||||    
T  30258508 aataatgtcccgtcgaaattaataatgatcttaactgtatataaatatt 30258460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 112
Target Start/End: Complemental strand, 15973751 - 15973669
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaa--ttttaaatacttgataatgataaaaataatagta 112  Q
    ||||||||||||||||| |||| || | |||| |||  ||||||| |  ||||||||||  ||||||||||||||||||||||    
T  15973751 ataaaatagaacacacacattagtagtatttatattatggtattttaatttttaaataccggataatgataaaaataatagta 15973669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 451 - 519
Target Start/End: Complemental strand, 30258455 - 30258387
Alignment:
Q  451 ttgagaagaaattaaaaagtcaaaatggtggcatcatcatatttgaatgattgtagtgtcatattgata 519  Q
    ||||| |||||||||||| |  ||||||||| || ||||||||||| || | |||||| ||||||||||    
T  30258455 ttgaggagaaattaaaaattggaaatggtggtattatcatatttgagtggtcgtagtgccatattgata 30258387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 32 - 68
Target Start/End: Original strand, 44508364 - 44508400
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattg 68  Q
    |||||||||||||||||||||| || |||||||||||    
T  44508364 ataaaatagaacacacatattagtagtgtttaaattg 44508400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 137; Significance: 3e-71; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 20 - 239
Target Start/End: Original strand, 19994440 - 19994653
Alignment:
Q  20 tgggggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaa 119  Q
    ||||||||| |  |||||||||||||||| |||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||      ||    
T  19994440 tgggggtcccacgtaaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgattatgataaaaataatagt------aa 19994533  T
Q  120 ttattatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttcct 219  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||| ||||| |||||| |||||||||||||||||||||| |||||||||| ||||||    
T  19994534 ttattatttttattcgtgaatatcacttgccaaacatttagcttatagtggttgtgataagaataagaataagaattcaattaaatttcttatatttcct 19994633  T
Q  220 tcattcaaatacaatgagtt 239  Q
    |||||||||| |||||||||    
T  19994634 tcattcaaatccaatgagtt 19994653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 30 - 239
Target Start/End: Original strand, 12405426 - 12405623
Alignment:
Q  30 aaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattatttt 129  Q
    ||||||||||||||||||| |||| || || |||||||| |||| |||||||||||||||||||||||||||||||||||||      ||||||||||||    
T  12405426 aaataaaatagaacacacacattagtagtgattaaattgaggtacttaattttaaatacttgataatgataaaaataatagt------aattattatttt 12405519  T
Q  130 tattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttccttcattcaaat 229  Q
    |||||||||||||||||||||||| ||||||||||||||| | |||      ||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  12405520 tattcgtgaatatcacttcccataaatttagcttatggtgattgtg------ataagaataagaattcaattgaatttcttatctttccatcattcaaat 12405613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 242 - 519
Target Start/End: Original strand, 22694854 - 22695131
Alignment:
Q  242 taagagtgttcttat-accttagtctctcttctgtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcatt 340  Q
    ||||||||||||||  ||||||||| || ||| ||||||||||||||  |||| |||||| |||||||||||||||| | |   ||||||||||  | ||    
T  22694854 taagagtgttcttaagaccttagtccctattcggtataatgtcccttaagaattaagaaaggtcttaaaaacatagttcattcaataatgtatgcccctt 22694953  T
Q  341 aggaataaaagagtacttttaagatcatagttccttcgagaacaataatgtctcatcgaaattaagaatgatcttaacggtatataaatattctttcaat 440  Q
     |||||||| ||||||||||||||||||||| ||||    |||||||||||| | ||||||||||||||||||||||| ||||| |||||||||||||||    
T  22694954 cggaataaa-gagtacttttaagatcatagtcccttttgaaacaataatgtcccgtcgaaattaagaatgatcttaacagtatagaaatattctttcaat 22695052  T
Q  441 gtttttctatttgagaagaaattaaaaagtcaaaatggtggcatcatcatatttgaatgattgtagtgtcatattgata 519  Q
     |||||||| || || ||||||||||||||| || |||||| |||| ||||||||| || ||||||| |||| ||||||    
T  22695053 atttttctaattaaggagaaattaaaaagtcgaattggtggtatcaccatatttgagtggttgtagtatcatgttgata 22695131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 22 - 234
Target Start/End: Original strand, 11559269 - 11559469
Alignment:
Q  22 ggggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaatt 121  Q
    ||||||| | ||||||||||||||||| |||  || ||||||||||||||||||||||||||||||||||||||||||||||||||      | ||||||    
T  11559269 ggggtcccacataaaatagaacacacacattggtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaataa------ttgtaatt 11559362  T
Q  122 attatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttccttc 221  Q
    |||||||||||||| ||||||||||| ||||| ||||||||||||||||| |||      ||||||||||||||| |||| |||||||||| ||||||||    
T  11559363 attatttttattcgagaatatcactttccataaatttagcttatggtggttgtg------ataagaataagaatttaattaaatttcttatatttccttc 11559456  T
Q  222 attcaaatacaat 234  Q
    |||||||| ||||    
T  11559457 attcaaatccaat 11559469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 22 - 234
Target Start/End: Original strand, 11533759 - 11533959
Alignment:
Q  22 ggggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaatt 121  Q
    ||||||| | ||||||||||||||||| |||  || ||||||||||||||||||||||||||||||||||||||||||||||||||      | ||||||    
T  11533759 ggggtcccacataaaatagaacacacacattggtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaataa------ttgtaatt 11533852  T
Q  122 attatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttccttc 221  Q
    |||||||||||||| ||||||||||| ||||| ||||||||||||||||| |||      ||||||||||||||| |||| |||||||||| ||| ||||    
T  11533853 attatttttattcgagaatatcactttccataaatttagcttatggtggttgtg------ataagaataagaatttaattaaatttcttatatttacttc 11533946  T
Q  222 attcaaatacaat 234  Q
    |||||||| ||||    
T  11533947 attcaaatccaat 11533959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 22 - 234
Target Start/End: Complemental strand, 5857023 - 5856823
Alignment:
Q  22 ggggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaatt 121  Q
    ||||||| | ||||| ||||||| ||| |||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||      |||||||    
T  5857023 ggggtcccacataaactagaacatacacattagtagtgtttaaattgcggtatttaattttaaataattgataatgataaaaataat------agtaatt 5856930  T
Q  122 attatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttccttc 221  Q
     ||||||||||||| ||||||||||||||| | ||||||||||||||||| |||      ||||||||||||||| |||| |||||||||| ||||||||    
T  5856929 gttatttttattcgagaatatcacttcccaaaaatttagcttatggtggttgtg------ataagaataagaatttaattaaatttcttatatttccttc 5856836  T
Q  222 attcaaatacaat 234  Q
    |||||||| ||||    
T  5856835 attcaaatccaat 5856823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 32 - 234
Target Start/End: Original strand, 25313541 - 25313733
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattattttta 131  Q
    ||||||||||||||| |||||| || |||||||||||||||||||||||||||||||||||||||||||||||    | || ||||||||||||||||||    
T  25313541 ataaaatagaacacatatattagtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaa----aataatagtaattattattttta 25313636  T
Q  132 ttcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttccttcattcaaatac 231  Q
    |||| ||||||||||||| ||| |||||||||||| | || |||      ||||||||||||||| ||||||||||||||| ||| |||||||| ||| |    
T  25313637 ttcgagaatatcacttcctataaatttagcttatgatagttgtg------ataagaataagaatttaattgaatttcttatattttcttcattctaatcc 25313730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 32 - 234
Target Start/End: Original strand, 26201035 - 26201227
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattattttta 131  Q
    ||||||||||||||| |||||| || |||||||||||||||||||||||||||||||||||||||||||||||    | || ||||||||||||||||||    
T  26201035 ataaaatagaacacatatattagtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaa----aataatagtaattattattttta 26201130  T
Q  132 ttcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttccttcattcaaatac 231  Q
    |||| ||||||||||||| ||| |||||||||||| | || |||      ||||||||||||||| ||||||||||||||| ||| |||||||| ||| |    
T  26201131 ttcgagaatatcacttcctataaatttagcttatgatagttgtg------ataagaataagaatttaattgaatttcttatattttcttcattctaatcc 26201224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 20 - 234
Target Start/End: Original strand, 20747353 - 20747555
Alignment:
Q  20 tgggggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaa 119  Q
    ||||||||||| ||||||||||||  ||| |||| || |||||||||||||||||||||||||||||||||||||| |||||||| ||      ||||||    
T  20747353 tgggggtcctacataaaatagaacttacacattagtagtgtttaaattgcggtatttaattttaaatacttgataacgataaaaacaa------tagtaa 20747446  T
Q  120 ttattatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttcct 219  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||| || |||       |||||| ||| ||| ||||||||||||||| ||||||    
T  20747447 ttattatttttattcgtgaatatcacttcccataaatttagcatatggttgttgtg------gtaagaacaaggatttaattgaatttcttatatttcct 20747540  T
Q  220 tcattcaaatacaat 234  Q
    |||||||||| ||||    
T  20747541 tcattcaaattcaat 20747555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 22 - 234
Target Start/End: Original strand, 11569749 - 11569949
Alignment:
Q  22 ggggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaatt 121  Q
    ||||||| | ||||||||||||||||| |||   | ||||||||||||||||||||||||||||||||||||||||||||||||||      ||||||||    
T  11569749 ggggtcccacataaaatagaacacacacattggaagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaataa------tagtaatt 11569842  T
Q  122 attatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttccttc 221  Q
    |||||||||||||| ||||||||||  ||||| |||||||||||||| || |||      | ||||||||||||| |||| |||||||||| ||||||||    
T  11569843 attatttttattcgagaatatcactgtccataaatttagcttatggtcgttgtg------aaaagaataagaatttaattaaatttcttatatttccttc 11569936  T
Q  222 attcaaatacaat 234  Q
    |||||||| ||||    
T  11569937 attcaaatccaat 11569949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 24 - 239
Target Start/End: Complemental strand, 17914628 - 17914425
Alignment:
Q  24 ggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattat 123  Q
    ||||||| ||||||| ||||||||| |||| || ||||| |||| |||||||||||||||||||| |||| |||||||||||||||| |      |||||    
T  17914628 ggtcctacataaaatggaacacacacattaatagtgttttaattacggtatttaattttaaatacctgatgatgataaaaataatagca------attat 17914535  T
Q  124 tatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttccttcat 223  Q
    |||||||||| ||||||||||||||||||| |||||| |||||||||| |||      |||||||||||||||||||| |||||| ||| ||||||||||    
T  17914534 tatttttatttgtgaatatcacttcccataaatttaggttatggtggttgtg------ataagaataagaattcaattcaatttcatatctttccttcat 17914441  T
Q  224 tcaaatacaatgagtt 239  Q
    ||||||  ||||||||    
T  17914440 tcaaatctaatgagtt 17914425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 32 - 239
Target Start/End: Original strand, 11612971 - 11613166
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattattttta 131  Q
    |||||||| |||||||| |||| || |||||||||| |||||||||||||||||||||||||||||||||||||||||||      | | |||| |||||    
T  11612971 ataaaataaaacacacacattagtagtgtttaaatttcggtatttaattttaaatacttgataatgataaaaataatagt-----gattaattaatttta 11613065  T
Q  132 ttcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttccttcattcaaatac 231  Q
    ||||||||||||| || ||||| |||||||||||||| || |||      ||||||||||||||||||||||||||||||| |||| ||||||||||| |    
T  11613066 ttcgtgaatatcattttccataaatttagcttatggt-gttgtg------ataagaataagaattcaattgaatttcttatctttcattcattcaaattc 11613158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 20 - 185
Target Start/End: Original strand, 16835218 - 16835377
Alignment:
Q  20 tgggggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaa 119  Q
    ||||||||| | ||||||||||||||||| |||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||      ||||||    
T  16835218 tgggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataa------tagtaa 16835311  T
Q  120 ttattatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataa 185  Q
    |||||||||||||| | ||||||||||| ||||| |||||| |||||||||| |||||| ||||||    
T  16835312 ttattatttttatttgagaatatcactttccataaatttagtttatggtggttgtgataagaataa 16835377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 125 - 239
Target Start/End: Original strand, 22694518 - 22694632
Alignment:
Q  125 atttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttccttcatt 224  Q
    ||||||||||||||||||||||| ||||| |||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  22694518 atttttattcgtgaatatcacttaccatatatttagcttatgatggttgtgataagaataagaataagaattcaattgaatttcttatttttccttcatt 22694617  T
Q  225 caaatacaatgagtt 239  Q
    ||||| |||||||||    
T  22694618 caaatccaatgagtt 22694632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 242 - 521
Target Start/End: Original strand, 2699640 - 2699917
Alignment:
Q  242 taagagtgttcttata-ccttagtctctcttctgtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcatt 340  Q
    |||||||||||||| | || ||||| || ||| || |||||||||||| |||| ||||| | |||||||||||||||||||  |||||| || |||| ||    
T  2699640 taagagtgttcttaaaaccatagtcccttttcggtttaatgtcccttcagaattaagaataatcttaaaaacatagtcccttcgataatataagttcctt 2699739  T
Q  341 aggaataaaagagtacttttaagatcatagttcctt--cgagaacaataatgtctcatcgaaattaagaatgatcttaacggtatataaatattctttca 438  Q
     |||||||| ||||||| ||||||||||||| ||||  ||| || ||||||||| | ||  |||||||||||||||||||| ||||||||||||||||||    
T  2699740 cggaataaa-gagtactattaagatcatagtcccttttcga-aataataatgtcccgtcagaattaagaatgatcttaacgatatataaatattctttca 2699837  T
Q  439 atgtttttctatttgagaagaaattaaaaagtcaaaatggtggcatcatcatatttgaatgattgtagtgtcatattgatatt 521  Q
    || |||   || ||||| ||| ||||||||||  |||||| |  |||| |||||||||||| | |||||||||||||||||||    
T  2699838 atattt---taattgaggagatattaaaaagtggaaatggcgatatcaccatatttgaatggtcgtagtgtcatattgatatt 2699917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 20 - 225
Target Start/End: Original strand, 2699171 - 2699364
Alignment:
Q  20 tgggggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaa 119  Q
    ||||||||| | |||||||||||  |||| |||| || |||||||||||||||||||||||||||||||| |||||| ||||||||||      ||||||    
T  2699171 tgggggtcccacataaaatagaattcacacattagtagtgtttaaattgcggtatttaattttaaatactagataataataaaaataa------tagtaa 2699264  T
Q  120 ttattatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttcct 219  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||  | || ||      |||||||||||||||| ||||||||||||||| ||| ||    
T  2699265 ttattatttttattcgagaatatcacttcccataaatttagcttataatagttgt------aataagaataagaatttaattgaatttcttatattttct 2699358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 348 - 519
Target Start/End: Original strand, 12405990 - 12406161
Alignment:
Q  348 aaagagtacttttaagatcatagttccttcgagaacaataatgtctcatcgaaattaagaatgatcttaacggtatataaatattctttcaatgtttttc 447  Q
    |||||||| ||||||||||||||| ||||   ||||||||||||| | |||||||||||||||| |||||| ||||||||||||||||||||| ||||||    
T  12405990 aaagagtatttttaagatcatagtcccttttggaacaataatgtcccgtcgaaattaagaatgagcttaacagtatataaatattctttcaatatttttc 12406089  T
Q  448 tatttgagaagaaattaaaaagtcaaaatggtggcatcatcatatttgaatgattgtagtgtcatattgata 519  Q
    || ||||| ||||||||||| ||||||||||| | |||| ||||||||| || | |||||  ||||||||||    
T  12406090 taattgaggagaaattaaaatgtcaaaatggtagtatcaccatatttgagtggtcgtagtaccatattgata 12406161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 20 - 185
Target Start/End: Original strand, 6406916 - 6407074
Alignment:
Q  20 tgggggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaa 119  Q
    ||||||||||  ||||||||||||||||| |||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||      ||||||    
T  6406916 tgggggtcctgcataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataa------tagtaa 6407009  T
Q  120 ttattatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataa 185  Q
    |||||| ||||||||| |||||||| || ||||| ||||||||||||||||| |||||| ||||||    
T  6407010 ttatta-ttttattcgagaatatcattttccataaatttagcttatggtggttgtgataagaataa 6407074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 20 - 185
Target Start/End: Original strand, 17963614 - 17963772
Alignment:
Q  20 tgggggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaa 119  Q
    ||||||||| | ||||||||||||||||| |||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||      ||||||    
T  17963614 tgggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataa------tagtaa 17963707  T
Q  120 ttattatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataa 185  Q
    || ||| ||||||||| |||||||||||  |||| ||||||||||||| ||| |||||| ||||||    
T  17963708 ttgtta-ttttattcgagaatatcacttttcataaatttagcttatggcggttgtgataagaataa 17963772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 259 - 521
Target Start/End: Original strand, 19994959 - 19995213
Alignment:
Q  259 cttagtctctcttctgtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcattaggaataaaagagtactt 358  Q
    ||||||| || ||| ||||||||||||||| |||| |||||| || |||||||||||||||||   ||||||||||| | ||  |||| ||||||||| |    
T  19994959 cttagtccctattcagtataatgtcccttcagaattaagaaaggttttaaaaacatagtcccttctataatgtatgtcccttcagaat-aaagagtac-t 19995056  T
Q  359 ttaagatcatagttccttcgagaacaataatgtctcatcgaaattaagaatgatcttaacggtatataaatattctttcaatgtttttctatttgagaag 458  Q
    ||| ||||||||| ||||   |||||||||||| |  |   ||||||||||||||||||  ||||| |||||||||| |||| ||      |||||| ||    
T  19995057 ttaggatcatagtcccttttggaacaataatgttttgtacgaattaagaatgatcttaaatgtatacaaatattcttccaatatt------tttgaggag 19995150  T
Q  459 aaattaaaaagtcaaaatggtggcatcatcatatttgaatgattgtagtgtcatattgatatt 521  Q
    ||||||||||||| ||||||||| |||| ||||||||| || | |||||  ||||||||||||    
T  19995151 aaattaaaaagtcgaaatggtggtatcaccatatttgagtggtcgtagtaccatattgatatt 19995213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 277 - 462
Target Start/End: Original strand, 11534289 - 11534476
Alignment:
Q  277 taatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcattaggaataaaagagtacttttaagatcatagttcct- 375  Q
    |||||||||||| |||| || ||  |||||||||||||||||| | ||||||| ||||| | |||||||| ||||| |||||||||||||||||| |||     
T  11534289 taatgtcccttcggaattaaaaatggtcttaaaaacatagtccatttgataatatatgtcccttaggaat-aaagaatacttttaagatcatagtcccta 11534387  T
Q  376 tcgagaacaataatgtctcatcgaaattaagaatgatcttaacggta--tataaatattctttcaatgtttttctatttgagaagaaat 462  Q
    |   ||| || |||||| ||||||||||||||||||||||||| |||  |||||| | | ||||||| |||||||||||||| ||||||    
T  11534388 tttggaataacaatgtcccatcgaaattaagaatgatcttaacagtatttataaaaagtatttcaatatttttctatttgaggagaaat 11534476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 277 - 462
Target Start/End: Original strand, 11559799 - 11559986
Alignment:
Q  277 taatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcattaggaataaaagagtacttttaagatcatagttcct- 375  Q
    |||||||||||| |||| |||||  |||||||||||||||||| | ||||||| ||||| | || ||||| |||||||||||||||||||||||| |||     
T  11559799 taatgtcccttcggaattaagaatggtcttaaaaacatagtccatttgataatatatgtcccttcggaat-aaagagtacttttaagatcatagtcccta 11559897  T
Q  376 tcgagaacaataatgtctcatcgaaattaagaatgatcttaacggta--tataaatattctttcaatgtttttctatttgagaagaaat 462  Q
    |   ||| || |||||| ||||| ||||||||||||||||||| |||  |||||| | | ||||||| |||||||||||||| ||||||    
T  11559898 tttggaataacaatgtcccatcggaattaagaatgatcttaacagtatttataaaaagtatttcaatatttttctatttgaggagaaat 11559986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 23 - 171
Target Start/End: Complemental strand, 17600414 - 17600273
Alignment:
Q  23 gggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaatta 122  Q
    |||||| | |||||||||||||||   |  |||| ||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||   |||    
T  17600414 gggtcccacataaaatagaacaca---aacattagtgtttaaattgtggtatttaattttaaataattgataatgataaaaataacagtagtag---tta 17600321  T
Q  123 ttatttttattcgtgaatatcacttcccatacatttagcttatggtggt 171  Q
    || ||||||  | |||||||||||||||||| |||||||||||||||||    
T  17600320 tttttttta-gcatgaatatcacttcccataaatttagcttatggtggt 17600273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 118 - 228
Target Start/End: Complemental strand, 11428914 - 11428810
Alignment:
Q  118 aattattatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttc 217  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||      |||| |||| ||||||||||||||||||||| ||||    
T  11428914 aattattatttttattcgtgaatatcacttcccataaatttagcttatgttggttgtg------ataaaaatatgaattcaattgaatttcttatatttc 11428821  T
Q  218 cttcattcaaa 228  Q
    |||||||||||    
T  11428820 cttcattcaaa 11428810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 58 - 229
Target Start/End: Complemental strand, 14509979 - 14509820
Alignment:
Q  58 tgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattatttttattcgtgaatatcacttcccatacatt 157  Q
    ||||||||||| ||||||||||||||||||||| ||||| |||||||||||      |||||||||| |||||||| | |||||||||||| |||| |||    
T  14509979 tgtttaaattgtggtatttaattttaaatacttaataataataaaaataat------agtaattattttttttatttgagaatatcacttctcataaatt 14509886  T
Q  158 tagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttccttcattcaaat 229  Q
    ||| |||||||||| | |      ||||||||| ||||| |||| |||||||||| ||||| ||||||||||    
T  14509885 tagtttatggtggttgcg------ataagaataggaatttaattaaatttcttatatttccatcattcaaat 14509820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 115 - 234
Target Start/End: Original strand, 4156480 - 4156593
Alignment:
Q  115 agtaattattatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttattt 214  Q
    ||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||| ||      |||||||||||||||| |||| |||||||||| |    
T  4156480 agtaattattatttttattcgagaatatcacttccgataaatttagcttatggtggttgt------aataagaataagaatttaattaaatttcttatat 4156573  T
Q  215 ttccttcattcaaatacaat 234  Q
    |||||| |||||||| ||||    
T  4156574 ttcctttattcaaatccaat 4156593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 32 - 229
Target Start/End: Original strand, 33686711 - 33686896
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattattttta 131  Q
    |||||||| |||  ||| |||| || |||||||| || |||||||| ||||||||||||| |||||||||||||||      ||||||||||||||||||    
T  33686711 ataaaataaaacttacaaattagtagtgtttaaactgtggtatttagttttaaatacttggtaatgataaaaataa------tagtaattattattttta 33686804  T
Q  132 ttcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttccttcattcaaat 229  Q
    |||   |||||||||| ||||| |||||| ||| |||| | |||      |||||||||| |||| ||||||||||||||| |||| |||||||||||    
T  33686805 ttcaataatatcactttccataaatttagtttagggtgattgtg------ataagaataataattaaattgaatttcttatatttcattcattcaaat 33686896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 277 - 518
Target Start/End: Original strand, 4156936 - 4157176
Alignment:
Q  277 taatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcattaggaataaaagagtacttttaagatcatagttcc-t 375  Q
    |||||||||||| |||| |||||  ||||||||||||||||| ||   ||||| || || | || ||||| |||||||| | ||||||||||| | || |    
T  4156936 taatgtcccttcggaattaagaatggtcttaaaaacatagtcacttcaataatataagtcccttcggaat-aaagagtattattaagatcataatccctt 4157034  T
Q  376 tcgagaacaataatgtctcatcgaaattaagaatgatcttaacgg--tatataaatattctttcaatgtttttctatttgagaagaaattaaaaagtcaa 473  Q
    |  |||| ||||||||| | ||| |||||||||||||||||| ||  |||||||||||||||||||| |||   || ||||  ||||||||||||||  |    
T  4157035 tttagaataataatgtcccgtcggaattaagaatgatcttaatgggatatataaatattctttcaatattt---taattgaagagaaattaaaaagtgga 4157131  T
Q  474 aatggtggcatcatcatatttgaatgattgtagtgtcatattgat 518  Q
    |||||||  |||| ||||||||| || | ||||| ||||||||||    
T  4157132 aatggtgatatcaccatatttgagtggtggtagtatcatattgat 4157176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 22610539 - 22610463
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataat 108  Q
    |||||||| |||||||| |||| || ||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  22610539 ataaaataaaacacacacattagtagtgtttaaattttggtatttaattttaaatacttgataatgataaaaataat 22610463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 274 - 456
Target Start/End: Complemental strand, 17599886 - 17599704
Alignment:
Q  274 gtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcattaggaataaaagagtacttttaagatcatagttc 373  Q
    ||||||||||||||| |||| |||||| || ||||||||||||||     |||||||||||| ||||   ||| || ||||||||||||||| ||| | |    
T  17599886 gtataatgtcccttcggaattaagaaaggttttaaaaacatagtcaaatcgataatgtatgtccattcaaaatgaa-gagtacttttaagattataatcc 17599788  T
Q  374 cttcg-agaacaataatgtctcatcgaaattaagaatgatcttaacggtatataaatattctttcaatgtttttctatttgaga 456  Q
    |||   | |||||||||||| | ||  |||||||||||||||||||  | |||||||||||||||||| |||||||| ||||||    
T  17599787 ctttttaaaacaataatgtcacttcataattaagaatgatcttaacaatgtataaatattctttcaatatttttctagttgaga 17599704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 355 - 496
Target Start/End: Original strand, 11613411 - 11613551
Alignment:
Q  355 acttttaagatcatagttccttcgagaacaataatgtctcatcgaaattaagaatgatcttaacggtatataaatattctttcaatgtttttctatttga 454  Q
    |||||||||||||||||  |||   ||||||||||||  | ||  |||||||||||||||||||  |||||||||||||||| |||  ||||||| |||     
T  11613411 acttttaagatcatagtcacttttggaacaataatgttccgtcagaattaagaatgatcttaacaatatataaatattcttttaat-attttctacttgc 11613509  T
Q  455 gaagaaattaaaaagtcaaaatggtggcatcatcatatttga 496  Q
    | ||||||||||||||| ||||||||| |||| |||| ||||    
T  11613510 ggagaaattaaaaagtcgaaatggtggtatcaccataattga 11613551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 242 - 463
Target Start/End: Original strand, 16835704 - 16835926
Alignment:
Q  242 taagagtgttcttat-accttagtctctcttctgtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcatt 340  Q
    ||||||||||||||  ||| ||||| || ||| || |||||||||||| |||| |||||  ||||||||||||||||||||  |||||   |||| | ||    
T  16835704 taagagtgttcttaagaccatagtcccttttcggtttaatgtcccttcggaattaagaatggtcttaaaaacatagtcccttcgataa---atgtccctt 16835800  T
Q  341 aggaataaa-agagtacttttaagatcatagttcct-tcgagaacaataatgtctcatcgaaattaagaatgatcttaacggtatata-aatattctttc 437  Q
      ||||||| |||||||||||||| ||||||| ||| |   ||| || |||||| | ||| ||||||||||||||||||| ||||||| || | | ||||    
T  16835801 cagaataaagagagtacttttaaggtcatagtccctatttggaataacaatgtcccgtcggaattaagaatgatcttaacagtatatataaaaatatttc 16835900  T
Q  438 aatgtttttctatttgagaagaaatt 463  Q
    ||| ||||||||||| || |||||||    
T  16835901 aatatttttctatttaaggagaaatt 16835926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 400 - 462
Target Start/End: Complemental strand, 11428401 - 11428339
Alignment:
Q  400 aattaagaatgatcttaacggtatataaatattctttcaatgtttttctatttgagaagaaat 462  Q
    ||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||| ||||||    
T  11428401 aattaagaatgatcttaacggtatataaaaattatttcaatatttttctatttgaggagaaat 11428339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 277 - 426
Target Start/End: Original strand, 17964139 - 17964287
Alignment:
Q  277 taatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcattaggaataaaagagtacttttaagatcatagttcct- 375  Q
    |||||||||||| |||| |||||  ||||||||| ||||||||||  |||||| ||||| ||||   |||||| ||||||||||||||||||||| |||     
T  17964139 taatgtcccttcggaattaagaatggtcttaaaa-catagtcccttcgataatatatgtccattcaaaataaa-gagtacttttaagatcatagtcccta 17964236  T
Q  376 tcgagaacaataatgtctcatcgaaattaagaatgatcttaacggtatata 426  Q
    |   ||| || |||||| | ||| |||||||||||||||||||||||||||    
T  17964237 tttggaagaacaatgtcgcgtcggaattaagaatgatcttaacggtatata 17964287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 303 - 462
Target Start/End: Original strand, 25314061 - 25314222
Alignment:
Q  303 tcttaaaaacatagtccctgtgataatgtatgttcattaggaataaaagagtacttttaagatcatagttcc----ttcgagaacaataatgtctcatcg 398  Q
    ||||||||||||||||| |  |||||| ||||| | ||  ||||||| ||||||||||||||||||||| ||    || | ||| || |||||| | |||    
T  25314061 tcttaaaaacatagtcctttcgataatatatgtcccttcagaataaa-gagtacttttaagatcatagtccccctatttg-gaataacaatgtcccgtcg 25314158  T
Q  399 aaattaagaatgatcttaacggtatataaatattctttcaatgtttttctatttgagaagaaat 462  Q
     ||||||||||||||||||||||||||||| | | ||||||  |||||||||||||| ||||||    
T  25314159 gaattaagaatgatcttaacggtatataaaaagtatttcaacatttttctatttgaggagaaat 25314222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 303 - 462
Target Start/End: Original strand, 26201555 - 26201716
Alignment:
Q  303 tcttaaaaacatagtccctgtgataatgtatgttcattaggaataaaagagtacttttaagatcatagttcc----ttcgagaacaataatgtctcatcg 398  Q
    ||||||||||||||||| |  |||||| ||||| | ||  ||||||| ||||||||||||||||||||| ||    || | ||| || |||||| | |||    
T  26201555 tcttaaaaacatagtcctttcgataatatatgtcccttcagaataaa-gagtacttttaagatcatagtccccctatttg-gaataacaatgtcccgtcg 26201652  T
Q  399 aaattaagaatgatcttaacggtatataaatattctttcaatgtttttctatttgagaagaaat 462  Q
     ||||||||||||||||||||||||||||| | | ||||||  |||||||||||||| ||||||    
T  26201653 gaattaagaatgatcttaacggtatataaaaagtatttcaacatttttctatttgaggagaaat 26201716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 32 - 109
Target Start/End: Complemental strand, 12689997 - 12689920
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataata 109  Q
    ||||||||||||||||| |||| || ||||||||| ||||||||||||||||||||  ||||| |||| |||||||||    
T  12689997 ataaaatagaacacacacattagtagtgtttaaatagcggtatttaattttaaataactgatattgatgaaaataata 12689920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 240 - 319
Target Start/End: Original strand, 12405900 - 12405980
Alignment:
Q  240 aataagagtgttcttat-accttagtctctcttctgtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtcc 319  Q
    ||||||||||||||||  ||||||||| || ||| ||||||||||||||| |||| |||||||||||||||||| ||||||    
T  12405900 aataagagtgttcttaagaccttagtccctattcggtataatgtcccttcagaattaagaaaagtcttaaaaacgtagtcc 12405980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 384 - 519
Target Start/End: Complemental strand, 5856424 - 5856294
Alignment:
Q  384 aataatgtctcatcgaaattaagaatgatcttaacggtatataaatattctttcaatgtttttctatttgagaagaaattaaaaagtcaaaatggtggca 483  Q
    |||||||||||||||||||||| ||| ||||||| |||||||||||||||||  |||  |    || ||||| ||||||||||||||  ||||||||| |    
T  5856424 aataatgtctcatcgaaattaa-aataatcttaatggtatataaatattcttaaaatact----taattgaggagaaattaaaaagtggaaatggtggta 5856330  T
Q  484 tcatcatatttgaatgattgtagtgtcatattgata 519  Q
    ||| ||||||||| || | ||| || ||||||||||    
T  5856329 tcaccatatttgagtggtcgtaatgccatattgata 5856294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 277 - 371
Target Start/End: Original strand, 11570327 - 11570420
Alignment:
Q  277 taatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcattaggaataaaagagtacttttaagatcatagt 371  Q
    |||||||||||| |||| |||||  |||||||||||||||||| |  |||||| ||||| | || || || ||||||||||||||||||||||||    
T  11570327 taatgtcccttcggaattaagaatggtcttaaaaacatagtccattcgataatatatgtcccttcgg-attaaagagtacttttaagatcatagt 11570420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 275 - 369
Target Start/End: Original strand, 20747881 - 20747974
Alignment:
Q  275 tataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcattaggaataaaagagtacttttaagatcata 369  Q
    |||||||||||||| |||| |||||   ||||||||||||||||||| ||||||| ||||| | || ||||| ||||| || |||||||||||||    
T  20747881 tataatgtcccttcggaattaagaatgatcttaaaaacatagtccctttgataatatatgtcccttcggaat-aaagaatatttttaagatcata 20747974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 19674813 - 19674724
Alignment:
Q  20 tgggggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataata 109  Q
    ||||||||| | ||||||||||||||||| || | || |||||||||   | ||||||||||||||||| | |||||||| |||||||||    
T  19674813 tgggggtccgacataaaatagaacacacacatcagtagtgtttaaataatgatatttaattttaaatacctaataatgatgaaaataata 19674724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 58 - 107
Target Start/End: Original strand, 12797880 - 12797929
Alignment:
Q  58 tgtttaaattgcggtatttaattttaaatacttgataatgataaaaataa 107  Q
    ||||||||| | ||||||||||||||||||||||| || |||||||||||    
T  12797880 tgtttaaatagtggtatttaattttaaatacttgacaacgataaaaataa 12797929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 308 - 371
Target Start/End: Original strand, 33687260 - 33687322
Alignment:
Q  308 aaaacatagtccctgtgataatgtatgttcattaggaataaaagagtacttttaagatcatagt 371  Q
    ||||||||||| ||  |||||| ||||||| || |||||||| |||||||||||||||||||||    
T  33687260 aaaacatagtctcttcgataatatatgttccttcggaataaa-gagtacttttaagatcatagt 33687322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 32 - 98
Target Start/End: Original strand, 22694451 - 22694517
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatga 98  Q
    ||||||||||||||||| ||    | |||||||||||| |||||||||| |||| ||||||||||||    
T  22694451 ataaaatagaacacacacatctagagtgtttaaattgccgtatttaattataaaaacttgataatga 22694517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 29891988 - 29892020
Alignment:
Q  76 taattttaaatacttgataatgataaaaataat 108  Q
    ||||||||||||||| |||||||||||||||||    
T  29891988 taattttaaatacttaataatgataaaaataat 29892020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 114; Significance: 1e-57; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 20 - 228
Target Start/End: Original strand, 24537079 - 24537281
Alignment:
Q  20 tgggggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaa 119  Q
    ||||||||| | |||||||| |||||| | |||| || |||||||| | |||||||||||||||||||||||||||||||||||||||||||      ||    
T  24537079 tgggggtcccacataaaatataacacatacattagtagtgtttaaactacggtatttaattttaaatacttgataatgataaaaataatagt------aa 24537172  T
Q  120 ttattatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttcct 219  Q
    ||||||||||||||||||||||||| |||||||||||||| ||| | ||||| |||||| ||||| |||||||| |||||||||||||||||| ||||||    
T  24537173 ttattatttttattcgtgaatatcatttcccatacatttaacttctagtggttgtgataagaatatgaataagatttcaattgaatttcttatctttcct 24537272  T
Q  220 tcattcaaa 228  Q
    |||||||||    
T  24537273 tcattcaaa 24537281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 32 - 234
Target Start/End: Complemental strand, 12797957 - 12797767
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattattttta 131  Q
    ||||||||||||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||      |||||||||||||||||    
T  12797957 ataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaataat------agtaattattattttta 12797864  T
Q  132 ttcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttccttcattcaaatac 231  Q
    |||| ||||||||||||| ||| ||||| ||||||||||| |||      ||||||||||||||| |||| |||||||||| |||||||||||||||| |    
T  12797863 ttcgagaatatcacttcctataaatttaccttatggtggttgtg------ataagaataagaatttaattaaatttcttatatttccttcattcaaatcc 12797770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 32 - 234
Target Start/End: Original strand, 25477357 - 25477547
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattattttta 131  Q
    ||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||    
T  25477357 ataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaataa------tagtaattattattttta 25477450  T
Q  132 ttcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttccttcattcaaatac 231  Q
    |||| ||||||||||| | ||| ||||||||||||||||| | |      ||||||||||||||| |||| |||||||||| |||||||||||||||| |    
T  25477451 ttcgagaatatcactttctataaatttagcttatggtggttgcg------ataagaataagaatttaattaaatttcttatatttccttcattcaaatcc 25477544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 32 - 234
Target Start/End: Original strand, 25496452 - 25496642
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattattttta 131  Q
    ||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||    
T  25496452 ataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaataa------tagtaattattattttta 25496545  T
Q  132 ttcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttccttcattcaaatac 231  Q
    |||| ||||||||||| | ||| ||||| ||||||||||| |||      ||||||||||||||| |||| |||||||||| |||||||||||||||| |    
T  25496546 ttcgagaatatcactttctataaatttaacttatggtggttgtg------ataagaataagaatttaattaaatttcttatatttccttcattcaaatcc 25496639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 32 - 227
Target Start/End: Complemental strand, 29678706 - 29678523
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattattttta 131  Q
    ||||||||||||||||| |||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||      |||||||||||||||||    
T  29678706 ataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatatttgataatgataaaaataat------agtaattattattttta 29678613  T
Q  132 ttcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttccttcattcaa 227  Q
    ||||  |||||||||||||||| |||||||||| |||||| |||      ||||||||||||||| |||| |||||||||| ||||||||||||||    
T  29678612 ttcgaaaatatcacttcccataaatttagcttacggtggttgtg------ataagaataagaatttaattaaatttcttatatttccttcattcaa 29678523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 32 - 239
Target Start/End: Original strand, 40846650 - 40846845
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattattttta 131  Q
    ||||||||||||||||| |||| || ||||||||||| ||||||||||||||||||||||||||| ||||||||||      |||||||| |||||||||    
T  40846650 ataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataataataaaaataa------tagtaatttttattttta 40846743  T
Q  132 ttcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttccttcattcaaatac 231  Q
    || ||||||||||||||| ||| |||||| ||||| |||| |||      ||||||||||||||||||||||||||||||| ||||||||||||||||      
T  40846744 tttgtgaatatcacttcctataaatttagtttatgatggttgtg------ataagaataagaattcaattgaatttcttatctttccttcattcaaattt 40846837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 32 - 185
Target Start/End: Complemental strand, 30651942 - 30651796
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattattttta 131  Q
    ||||||||||||||||| |||| || ||||||||||| ||||||||||||||||||||||||| |||||||||||||      ||||||||||| |||||    
T  30651942 ataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgatagtgataaaaataat------agtaattatta-tttta 30651850  T
Q  132 ttcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataa 185  Q
    |||| ||||||||||| ||||| ||||||||||||||||| |||||| ||||||    
T  30651849 ttcgagaatatcactttccataaatttagcttatggtggttgtgataagaataa 30651796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 32 - 234
Target Start/End: Complemental strand, 12361275 - 12361090
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattattttta 131  Q
    ||||||||||| ||||||  || || ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||         ||||||||||    
T  12361275 ataaaatagaagacacat--tagtagtgtttaaattgtggtatttaattttaaataattgataatgataaaaataatagta---------attattttta 12361187  T
Q  132 ttcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttccttcattcaaatac 231  Q
    |||| || |||||||| ||||| ||||||||||||||||| |||      ||||||||||||||| |||| |||||||||| |||||||||||||||| |    
T  12361186 ttcgagagtatcactttccataaatttagcttatggtggttgtg------ataagaataagaatttaattaaatttcttatatttccttcattcaaatcc 12361093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 240 - 519
Target Start/End: Original strand, 40847133 - 40847407
Alignment:
Q  240 aataagagtgttcttat-accttagtctctcttctgtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttca 338  Q
    ||||||||||||||||  ||||||||| || ||| ||||||||||| |||  ||| |||||| ||||||||||||||| || | ||||||  ||| | |     
T  40847133 aataagagtgttcttaagaccttagtccctattcagtataatgtccattcgaaattaagaaaggtcttaaaaacatagcccttttgataacatatctccc 40847232  T
Q  339 ttaggaataaaagagtacttttaagatcatagttccttcgagaacaataatgtctcatcgaaattaagaatgatcttaacggtatataaatattctttca 438  Q
    ||| ||||||| |||| ||||||| |||||||| ||||   ||||||||||||| | ||| ||||||||||||||||||  |||||||||||||||||||    
T  40847233 ttaagaataaa-gagtgcttttaatatcatagtcccttttggaacaataatgtcccgtcgtaattaagaatgatcttaaaagtatataaatattctttca 40847331  T
Q  439 atgtttttctatttgagaagaaattaaaaagtcaaaatggtggcatcatcatatttgaatgattgtagtgtcatattgata 519  Q
    ||  ||     ||||||  |||||||||||||| ||||||||| |||| ||||||||| || | ||||| |||| ||||||    
T  40847332 ataatt-----tttgaggtgaaattaaaaagtcgaaatggtggtatcaccatatttgagtggtcgtagtatcatcttgata 40847407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 381 - 496
Target Start/End: Original strand, 17544969 - 17545084
Alignment:
Q  381 aacaataatgtctcatcgaaattaagaatgatcttaacggtatataaatattctttcaatgtttttctatttgagaagaaattaaaaagtcaaaatggtg 480  Q
    |||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||| |||     
T  17544969 aacaataatgtctcgtcggaattaagaatgatcttaacagtatataaatattctttcaatatttttctatttgaggagaaattaaaaagtcgaaaaggta 17545068  T
Q  481 gcatcatcatatttga 496  Q
    | ||||||||||||||    
T  17545069 gtatcatcatatttga 17545084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 32 - 185
Target Start/End: Original strand, 19891575 - 19891719
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattattttta 131  Q
    ||||||||||||||||||  ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||      |||||||||||| |||||    
T  19891575 ataaaatagaacacacat--tattagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataa------tagtaattatta-tttta 19891665  T
Q  132 ttcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataa 185  Q
    |||| ||||||||||| ||||| |||||||||||||||||  ||||| ||||||    
T  19891666 ttcgagaatatcactttccataaatttagcttatggtggttctgataagaataa 19891719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 20 - 185
Target Start/End: Original strand, 9179784 - 9179941
Alignment:
Q  20 tgggggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaa 119  Q
    ||||||||| | ||||||||||||||||| |||| || ||||||||||| ||||||||| ||||||||||||||||||||||||||||      ||||||    
T  9179784 tgggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaa-tttaaatacttgataatgataaaaataa------tagtaa 9179876  T
Q  120 ttattatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataa 185  Q
    |||||| ||||||||| ||||||||||| | ||| ||||||||||||||||| |||||| ||||||    
T  9179877 ttatta-ttttattcgagaatatcactttcgataaatttagcttatggtggttgtgataagaataa 9179941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 18345456 - 18345289
Alignment:
Q  20 tgggggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatag---tagtag 116  Q
    ||||||||| | ||||||||||||||||| |||| || ||||||||||| ||||||||||||||||||||| ||||||||||||| || |    || |||    
T  18345456 tgggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttaataatgataaaaaaaaaaaaaataatag 18345357  T
Q  117 taattattatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataa 185  Q
    ||||||||||||| ||| | ||||||||||| ||||| ||||||||||||||||| |||||| ||||||    
T  18345356 taattattatttt-atttgagaatatcactttccataaatttagcttatggtggttgtgataagaataa 18345289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 20 - 185
Target Start/End: Original strand, 9184475 - 9184632
Alignment:
Q  20 tgggggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaa 119  Q
    ||||||||| | ||||||||||||||||| |||| || ||||||||||| ||||||||| ||||||||||||||||||||||||||||      ||||||    
T  9184475 tgggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaa-tttaaatacttgataatgataaaaataa------tagtaa 9184567  T
Q  120 ttattatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataa 185  Q
    |||||| ||||||||| ||||| ||||| | ||| ||||||||||||||||| |||||| ||||||    
T  9184568 ttatta-ttttattcgagaataccactttcgataaatttagcttatggtggttgtgataagaataa 9184632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 32 - 185
Target Start/End: Original strand, 17974418 - 17974565
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatac-ttgataatgataaaaataatagtagtagtaattattattttt 130  Q
    ||||||||||||||||| |||| || ||||||||||| ||||||||||||||||||| |||||||||||||||||||      | |||||||||| ||||    
T  17974418 ataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatactttgataatgataaaaataa------ttgtaattatta-tttt 17974510  T
Q  131 attcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataa 185  Q
    ||||| ||||||||||| ||||| |||||||||||||| || |||||| ||||||    
T  17974511 attcgagaatatcactttccataaatttagcttatggtagttgtgataagaataa 17974565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 22 - 185
Target Start/End: Original strand, 17968021 - 17968176
Alignment:
Q  22 ggggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatac-ttgataatgataaaaataatagtagtagtaat 120  Q
    ||||||| | |||||||||||||||||||||| || ||||||||||| ||||||||||||||||||| |||||||||||||||||||      |||||||    
T  17968021 ggggtcccacataaaatagaacacacatattagtagtgtttaaattgtggtatttaattttaaatactttgataatgataaaaataa------tagtaat 17968114  T
Q  121 tattatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataa 185  Q
    ||||| ||||||| | |||||||| |  ||||| ||||||||||||||||| |||||| ||||||    
T  17968115 tatta-ttttatttgagaatatcaat--ccataaatttagcttatggtggttgtgataagaataa 17968176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 41 - 111
Target Start/End: Original strand, 34495183 - 34495253
Alignment:
Q  41 aacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagt 111  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  34495183 aacacacatattattagtgtttaaattgcagtatttaattttaaatacttgataatgataaaaataatagt 34495253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 32 - 189
Target Start/End: Original strand, 12001967 - 12002124
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattattttta 131  Q
    |||||||| || ||||| |||| || ||||| ||||||| ||||||||||| |||| |||  | ||||||  |||| | || ||||||||||||||||||    
T  12001967 ataaaataaaatacacacattagtagtgtttgaattgcgatatttaatttttaatatttgtaattgataatgataaaaataatagtaattattattttta 12002066  T
Q  132 ttcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaat 189  Q
    |||||| ||||||||||||||| ||||| |||||| || | |||||| ||||||||||    
T  12002067 ttcgtggatatcacttcccataaatttaacttatgttgattgtgataagaataagaat 12002124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 70 - 185
Target Start/End: Original strand, 1934097 - 1934205
Alignment:
Q  70 ggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattatttttattcgtgaatatcacttcccatacatttagcttatggtg 169  Q
    ||||||||||||||||||||||||| |||||||||||||||||      ||||||||||| ||| | ||||||||||| ||||| |||||||||||||||    
T  1934097 ggtatttaattttaaatacttgatagtgataaaaataatagta------attattatttt-attagagaatatcactttccataaatttagcttatggtg 1934189  T
Q  170 gtagtgataggaataa 185  Q
    || |||||| ||||||    
T  1934190 gttgtgataagaataa 1934205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 19896988 - 19896903
Alignment:
Q  20 tgggggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataa 107  Q
    ||||||||| | ||||||||||||||||||  || || |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  19896988 tgggggtcccacataaaatagaacacacat--tagtagtgtttaaattgcggtatttaattttaaatatttgataatgataaaaataa 19896903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 240 - 462
Target Start/End: Original strand, 9184962 - 9185184
Alignment:
Q  240 aataagagtgttcttat-accttagtctctcttctgtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttca 338  Q
    ||||||||||||||||  ||| ||||| || ||| || |||||||||||| |||| |||||  ||||||||||||||||||||  |||||   |||| |     
T  9184962 aataagagtgttcttaagaccatagtcgcttttcggtttaatgtcccttcggaattaagaatggtcttaaaaacatagtcccttcgataa---atgtccc 9185058  T
Q  339 ttaggaataaaagagtacttttaagatcatagttcct-tcgagaacaataatgtctcatcgaaattaagaatgatcttaacgg--tatataaatattctt 435  Q
    ||  | || |||||||||||||||||||||||| ||| |   ||| || |||||| | ||| |||||||||||||||||||||  |||||||| | | ||    
T  9185059 ttcaggat-aaagagtacttttaagatcatagtccctatttggaataacaatgtcccgtcggaattaagaatgatcttaacggtatatataaaaagtatt 9185157  T
Q  436 tcaatgtttttctatttgagaagaaat 462  Q
    ||||| |||||||||||||| ||||||    
T  9185158 tcaatatttttctatttgaggagaaat 9185184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 242 - 462
Target Start/End: Original strand, 25496869 - 25497091
Alignment:
Q  242 taagagtgttcttat-accttagtctctcttctgtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcatt 340  Q
    ||||||||||||||  ||||||||| || ||| || |||||||||||| |||| |||||  ||||||||| ||||||||||  |||||| ||||| | ||    
T  25496869 taagagtgttcttaagaccttagtcccttttcggtttaatgtcccttcggaattaagaatggtcttaaaa-catagtcccttcgataatatatgtccctt 25496967  T
Q  341 aggaataaaagagtacttttaagatcatagttcct-tcgagaacaataatgtctcatcgaaattaagaatgatcttaacgg--tatataaatattctttc 437  Q
      ||||||| ||||||||||||||||||||| | | |   ||| || |||||| | ||| ||||||||||||| |||||||  |||||||| | | ||||    
T  25496968 cagaataaa-gagtacttttaagatcatagtacttatttggaataacaatgtcacgtcggaattaagaatgattttaacggtatatataaaaagtatttc 25497066  T
Q  438 aatgtttttctatttgagaagaaat 462  Q
    ||| |||||||||||||| ||||||    
T  25497067 aatatttttctatttgaggagaaat 25497091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 23 - 160
Target Start/End: Original strand, 25637824 - 25637955
Alignment:
Q  23 gggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaatttt-aaatacttgataatgataaaaataatagtagtagtaatt 121  Q
    |||||| | ||||||||||||||||||  || || |||||||| |||||||||||||||| |||||||||||||||||||||||||      ||||||||    
T  25637824 gggtcccacataaaatagaacacacat--tagtagtgtttaaactgcggtatttaatttttaaatacttgataatgataaaaataa------tagtaatt 25637915  T
Q  122 attatttttattcgt-gaatatcacttcccatacatttag 160  Q
    ||||||||||||| | | |||||||||| |||| ||||||    
T  25637916 attatttttattcttaggatatcacttctcataaatttag 25637955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 242 - 462
Target Start/End: Original strand, 9180273 - 9180493
Alignment:
Q  242 taagagtgttcttat-accttagtctctcttctgtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcatt 340  Q
    ||||||||||||||  ||| ||||| || ||| || |||||||||||| |||| |||||  |||||||||| |||||||||  |||||   |||| | ||    
T  9180273 taagagtgttcttaagaccatagtcgcttttcggtttaatgtcccttcggaattaagaatggtcttaaaaaaatagtcccttcgataa---atgtccctt 9180369  T
Q  341 aggaataaaagagtacttttaagatcatagttcct-tcgagaacaataatgtctcatcgaaattaagaatgatcttaacgg--tatataaatattctttc 437  Q
      | ||||| ||||||||||||||||||||||||| |   ||| || |||||| | ||| |||||||||||||||||||||  |||||||| | | ||||    
T  9180370 caggataaa-gagtacttttaagatcatagttcctatttggaataacaatgtcccgtcggaattaagaatgatcttaacggtatatataaaaagtatttc 9180468  T
Q  438 aatgtttttctatttgagaagaaat 462  Q
    ||| |||||||||||||| ||||||    
T  9180469 aatatttttctatttgaggagaaat 9180493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 23 - 166
Target Start/End: Original strand, 15446341 - 15446480
Alignment:
Q  23 gggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaa-ttttaaatacttgataatgataaaaataatagtagtagtaatt 121  Q
    |||||| | ||||||||||||||| | |||| || ||||||||||| ||||||||| ||||||||||||||||||| ||||      ||||||| |||||    
T  15446341 gggtcccacataaaatagaacacatacattagtagtgtttaaattgtggtatttaatttttaaatacttgataatggtaaa------agtagtaataatt 15446434  T
Q  122 atta-tttttattcgtgaatatcacttcccatacatttagcttatg 166  Q
    |||| ||||||||| || |||||||||| ||||  |||||||||||    
T  15446435 attattttttattcatggatatcacttcacataattttagcttatg 15446480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 277 - 462
Target Start/End: Original strand, 25477877 - 25478063
Alignment:
Q  277 taatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcattaggaataaaagagtacttttaagatcatagt--tcc 374  Q
    |||||||||||| |||| |||||  ||||||||| ||||||||||  |||||| ||||| | ||  ||||||| |||||||||||||||||||||  |      
T  25477877 taatgtcccttcggaattaagaatggtcttaaaa-catagtcccttcgataatatatgtcccttcagaataaa-gagtacttttaagatcatagtactta 25477974  T
Q  375 ttcgagaacaataatgtctcatcgaaattaagaatgatcttaacgg--tatataaatattctttcaatgtttttctatttgagaagaaat 462  Q
    || || || || |||||| | ||| |||||||||||||||||||||  |||||||| | | ||||||| |||||||||||||| ||||||    
T  25477975 tttga-aataacaatgtcccgtcggaattaagaatgatcttaacggtatatataaaaagtatttcaatatttttctatttgaggagaaat 25478063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 348 - 462
Target Start/End: Complemental strand, 28603747 - 28603633
Alignment:
Q  348 aaagagtacttttaagatcatagttcct-tcgagaacaataatgtctcatcgaaattaagaatgatcttaacggtatataaatattctttcaatgttttt 446  Q
    |||||||||||||||||||||||| ||| |   ||| || |||||| | ||||||||||||||||||||||||||||||||||||| ||||  | |||||    
T  28603747 aaagagtacttttaagatcatagtccctatttggaataacaatgtcccgtcgaaattaagaatgatcttaacggtatataaatattatttc-ttattttt 28603649  T
Q  447 ctatttgagaagaaat 462  Q
    ||| ||||| ||||||    
T  28603648 ctaattgaggagaaat 28603633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 277 - 462
Target Start/End: Complemental strand, 18344938 - 18344752
Alignment:
Q  277 taatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcattaggaataaaagagtacttttaagatcatagttcct- 375  Q
    |||||||| ||| |||| |||||  ||||||||| ||||||||||  |||||| ||||| | ||  |||||||  |||||||||||||||||||| |||     
T  18344938 taatgtcctttcggaatgaagaatggtcttaaaa-catagtcccttcgataatatatgtcccttcagaataaat-agtacttttaagatcatagtcccta 18344841  T
Q  376 tcgagaacaataatgtctcatcgaaattaagaatgatcttaacggta--tataaatattctttcaatgtttttctatttgagaagaaat 462  Q
    |   ||| || |||||| | ||| |||||||||||||||||||||||  |||||| | | ||||||| |||||||||||||| ||||||    
T  18344840 tttggaataacaatgtcccgtcggaattaagaatgatcttaacggtatatataaaaagtatttcaatatttttctatttgaggagaaat 18344752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 44630516 - 44630592
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataat 108  Q
    ||||||||||||||||| |||| || ||||||||| | ||| ||||||||||||||| |||||||||||| ||||||    
T  44630516 ataaaatagaacacacacattagtattgtttaaatagtggtgtttaattttaaatacctgataatgataataataat 44630592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 302 - 426
Target Start/End: Complemental strand, 7735079 - 7734954
Alignment:
Q  302 gtcttaaaaacatagtccctgtgataatgtatgttcattaggaataaaagagtacttttaagatcatagt-tccttcgagaac-aataatgtctcatcga 399  Q
    ||||||| | |||||||| | ||||||  |||||||||| |||||||| |||||||| |||||||||||| || ||||||||  |||||||||   ||||    
T  7735079 gtcttaagagcatagtccatttgataaaatatgttcattcggaataaa-gagtacttgtaagatcatagtctctttcgagaaataataatgtccattcga 7734981  T
Q  400 aattaagaatgatcttaacggtatata 426  Q
    ||||||||||||||||||  |||||||    
T  7734980 aattaagaatgatcttaagagtatata 7734954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 32 - 166
Target Start/End: Complemental strand, 28604114 - 28603985
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattattttta 131  Q
    ||||||||||  ||||| ||||| | ||||||||| | | ||||||||||||||||| |||||||||| ||||||||| || ||   ||||||  |||||    
T  28604114 ataaaatagattacacagattatcagtgtttaaatagtgatatttaattttaaatacatgataatgatgaaaataataataata---attatt--tttta 28604020  T
Q  132 ttcgtgaatatcacttcccatacatttagcttatg 166  Q
    ||| || |||||||||||||||  ||||| |||||    
T  28604019 ttcatggatatcacttcccataattttaggttatg 28603985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 242 - 426
Target Start/End: Original strand, 1934539 - 1934721
Alignment:
Q  242 taagagtgttcttat-accttagtctctcttctgtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcatt 340  Q
    ||||||||||||||  ||| ||||| || ||| || | |||||||||| |||| |||||  ||||||||||||||||||||  |||||   |||| | ||    
T  1934539 taagagtgttcttaagaccatagtcgcttttcggtttcatgtcccttcggaattaagaatggtcttaaaaacatagtcccttcgataa---atgtccctt 1934635  T
Q  341 aggaataaaagagtacttttaagatcatagttcct-tcgagaacaataatgtctcatcgaaattaagaatgatcttaacggtatata 426  Q
      |||| ||||| |||||||||||||||||| ||| |   ||| || |||||| | ||| |||||||||||||||||||||||||||    
T  1934636 cagaat-aaagaatacttttaagatcatagtccctatttggaagaacaatgtcccgtcggaattaagaatgatcttaacggtatata 1934721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 33 - 166
Target Start/End: Original strand, 42925745 - 42925871
Alignment:
Q  33 taaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattatt-ttta 131  Q
    |||||||||||||||||  || || ||||||||| | | ||||||||||||||||| |||||||||| |||||||      || ||||||||||| ||||    
T  42925745 taaaatagaacacacat--tagtagtgtttaaatagtgatatttaattttaaatacctgataatgatgaaaataa------taataattattattattta 42925836  T
Q  132 ttcgtgaatatcacttcccatacatttagcttatg 166  Q
    ||| || |||||||||||||||  ||||| |||||    
T  42925837 ttcatggatatcacttcccataattttaggttatg 42925871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 120 - 189
Target Start/End: Original strand, 20103259 - 20103329
Alignment:
Q  120 ttattatttttattcgtgaatatcacttcccatacatttagcttatggtgg-tagtgataggaataagaat 189  Q
    |||||||||||| | ||||||||||||| ||||| |||||||||||||||| | |||||| ||||||||||    
T  20103259 ttattatttttagtggtgaatatcactttccataaatttagcttatggtggtttgtgataagaataagaat 20103329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 242 - 462
Target Start/End: Complemental strand, 12797476 - 12797254
Alignment:
Q  242 taagagtgttctta-taccttagtctctcttctgtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcatt 340  Q
    |||||||||||||| |||| ||||| || ||| || |||||||||||| |||| |||||   |||||||| ||||||||||  |||||| ||||| | ||    
T  12797476 taagagtgttcttaataccatagtcccttttcggtttaatgtcccttcagaattaagaatgctcttaaaa-catagtcccttcgataatatatgtccctt 12797378  T
Q  341 aggaataaaagagtacttttaagatcatagttcct-tcgagaacaataatgtctcatcgaaattaagaatgatcttaacg--gtatataaatattctttc 437  Q
      ||||||| ||||||||||||||||||| | ||| |   ||| || |||||| | ||  |||||| |||||||||||||   |||||||| | | ||||    
T  12797377 cagaataaa-gagtacttttaagatcataatccctgtttggaataacaatgtcccgtcagaattaaaaatgatcttaacgatatatataaaaagtgtttc 12797279  T
Q  438 aatgtttttctatttgagaagaaat 462  Q
    ||| |||||||||| ||| ||||||    
T  12797278 aatatttttctattcgaggagaaat 12797254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 19896912 - 19896855
Alignment:
Q  182 ataagaataagaattcaattgaatttcttatttttccttcattcaaatacaatgagtt 239  Q
    |||| ||||| |||||||||||||||||||| |||| ||||||||||| |||||||||    
T  19896912 ataaaaataaaaattcaattgaatttcttatatttcattcattcaaattcaatgagtt 19896855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 32 - 112
Target Start/End: Complemental strand, 32080405 - 32080324
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaa-tacttgataatgataaaaataatagta 112  Q
    |||||||||||||||||||||| || | |||| |||  | ||||||||||| || ||| |||||||||||||||||||||||    
T  32080405 ataaaatagaacacacatattaatagtatttatattatgatatttaatttttaagtacctgataatgataaaaataatagta 32080324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 277 - 462
Target Start/End: Original strand, 19892053 - 19892233
Alignment:
Q  277 taatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcattaggaataaaagagtacttttaagatcatagttcctt 376  Q
    |||||||||||| |||| |||||  ||||||||| |||||||| |  |||||| ||||| | ||  ||||||| ||||||||||||||||||||| |||     
T  19892053 taatgtcccttcagaattaagaatggtcttaaaa-catagtccattcgataatatatgtcccttcagaataaa-gagtacttttaagatcatagtcccta 19892150  T
Q  377 cgagaacaataatgtctcatcgaaattaagaatgatcttaacgg--tatataaatattctttcaatgtttttctatttgagaagaaat 462  Q
       | |     ||||||  ||| |||||||||||||||||||||  |||||||| | | ||||||| |||||||||||||| ||||||    
T  19892151 tttgga-----atgtctagtcggaattaagaatgatcttaacggtatatataaaaagtatttcaatatttttctatttgaggagaaat 19892233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 278 - 462
Target Start/End: Complemental strand, 31327264 - 31327079
Alignment:
Q  278 aatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcattaggaataaaagagtacttttaagatcatagttcct-t 376  Q
    ||||||||||| |||| |||||  ||||||||| |||||| |||  |||||| ||||| | || | ||||||| |||||||||||||||||||| ||| |    
T  31327264 aatgtcccttcggaattaagaatggtcttaaaa-catagttccttcgataatatatgtcccttcgaaataaaa-agtacttttaagatcatagtccctat 31327167  T
Q  377 cgagaacaataatgtctcatcgaaattaagaatgatcttaacgg--tatataaatattctttcaatgtttttctatttgagaagaaat 462  Q
       ||| || |||||| | ||  |||||||||||||||||| ||  |||||||| | | ||||||| | |||||||||||| ||||||    
T  31327166 ttggaataacaatgtcccgtcagaattaagaatgatcttaatggtatatataaaaagtatttcaatatgtttctatttgaggagaaat 31327079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 33 - 105
Target Start/End: Complemental strand, 31329089 - 31329017
Alignment:
Q  33 taaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaat 105  Q
    |||||||||||| |||  ||| || ||||||||| | ||||||||||||||||||| |||||||||| |||||    
T  31329089 taaaatagaacaaacacgttagtagtgtttaaatagtggtatttaattttaaatacatgataatgatgaaaat 31329017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 33 - 105
Target Start/End: Complemental strand, 31335810 - 31335738
Alignment:
Q  33 taaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaat 105  Q
    |||||||||||| |||  ||| || ||||||||| | ||||||||||||||||||| |||||||||| |||||    
T  31335810 taaaatagaacaaacacgttagtagtgtttaaatagtggtatttaattttaaatacatgataatgatgaaaat 31335738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 7712114 - 7712192
Alignment:
Q  36 aatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgat--aaaaataatagta 112  Q
    |||||||||||||||||| |||||| || |||| | |||||| |||||||||  ||||||||||  |||||||||||||    
T  7712114 aatagaacacacatattaataatgtctatattgtgatatttatttttaaatatctgataatgatgaaaaaataatagta 7712192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 277 - 426
Target Start/End: Original strand, 17968543 - 17968691
Alignment:
Q  277 taatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcattaggaataaaagagtacttttaagatcatagttcct- 375  Q
    |||||||||||| |||| |||||  ||||| ||||||||||||||  |||||| ||||| | ||   ||| |||||||||||||||||||||||| |||     
T  17968543 taatgtcccttcggaattaagaatggtctt-aaaacatagtcccttcgataatatatgtcccttcaaaat-aaagagtacttttaagatcatagtcccta 17968640  T
Q  376 tcgagaacaataatgtctcatcgaaattaagaatgatcttaacggtatata 426  Q
    |   ||| || |||||| | | | |||||||||||||||| ||||||||||    
T  17968641 tttggaagaacaatgtcccgttggaattaagaatgatcttcacggtatata 17968691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 303 - 376
Target Start/End: Complemental strand, 38591701 - 38591629
Alignment:
Q  303 tcttaaaaacatagtccctgtgataatgtatgttcattaggaataaaagagtacttttaagatcatagttcctt 376  Q
    ||||||||||||||||| | ||||||| ||||| | || | |||||| ||||| ||||||||||||||||||||    
T  38591701 tcttaaaaacatagtccatttgataatttatgtccctttgtaataaa-gagtatttttaagatcatagttcctt 38591629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 182 - 226
Target Start/End: Original strand, 34495308 - 34495352
Alignment:
Q  182 ataagaataagaattcaattgaatttcttatttttccttcattca 226  Q
    ||||||||||||||| || ||||||||| || |||||||||||||    
T  34495308 ataagaataagaatttaactgaatttctcatctttccttcattca 34495352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 107; Significance: 2e-53; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 20 - 228
Target Start/End: Complemental strand, 20521001 - 20520805
Alignment:
Q  20 tgggggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaa 119  Q
    ||||||||| | ||||||||||| ||||| |||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||      |||||    
T  20521001 tgggggtcccacataaaatagaatacacacattagtagtgtttaaattgcggtatttaactttaaatacttgataatgataaaaataat------agtaa 20520908  T
Q  120 ttattatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttcct 219  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||      ||||||||||||||| |||| |||||||||| ||||||    
T  20520907 ttattatttttattcgagaatatcacttcccataaatttagcttatggtggttgtg------ataagaataagaatttaattaaatttcttatatttcct 20520814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 32 - 234
Target Start/End: Original strand, 14437758 - 14437953
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattattttta 131  Q
    ||||||||||||||||| |||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||      || |||||||||||||||    
T  14437758 ataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataa------taataattattattttta 14437851  T
Q  132 ttcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttccttcattcaaatac 231  Q
    |||| ||||||||||| ||||| |||||||||| ||| || |||||| ||||||||||   |||| ||||||||||||||| |||||||||||||||| |    
T  14437852 ttcgagaatatcactttccataaatttagcttacggttgttgtgataagaataagaat-ttaatttaattgaatttcttatatttccttcattcaaatcc 14437950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 32 - 229
Target Start/End: Complemental strand, 46965040 - 46964856
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattattttta 131  Q
    |||||||||||| |||| ||||| | |||||||| |||||||||||||||||||||||||||||||||||||||||      || |||| ||||||||||    
T  46965040 ataaaatagaactcacacattat-agtgtttaaactgcggtatttaattttaaatacttgataatgataaaaataa------taataataattattttta 46964948  T
Q  132 ttcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttccttcattcaaat 229  Q
    |||| |||||||||||| |||| ||||||||||||||||| |||      ||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  46964947 ttcgagaatatcacttcacataaatttagcttatggtggttgtg------ataagaataagaatttaattgaatttcttatatttccttcattcaaat 46964856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 32 - 234
Target Start/End: Original strand, 12970876 - 12971068
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaatttt-aaatacttgataatgataaaaataatagtagtagtaattattattttt 130  Q
    |||||||||||||||||  ||| || ||||||||||||||||||||||||| ||||||| |||||||||||||     | || |||||||||||||||||    
T  12970876 ataaaatagaacacacactttagtagtgtttaaattgcggtatttaattttaaaatactggataatgataaaa-----aataatagtaattattattttt 12970970  T
Q  131 attcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttccttcattcaaata 230  Q
    ||||||||||||||||||||||| |||||||||||| |||| |||      |||| |||||||||| |||| |||||||||| ||||||||||||||||     
T  12970971 attcgtgaatatcacttcccataaatttagcttatgatggttgtg------ataataataagaatttaattaaatttcttatatttccttcattcaaatc 12971064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 32 - 185
Target Start/End: Original strand, 7570283 - 7570429
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattattttta 131  Q
    |||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||      |||||||||||| |||||    
T  7570283 ataaaatagaacacacatattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataa------tagtaattatta-tttta 7570375  T
Q  132 ttcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataa 185  Q
    |||| ||||||||||| ||||| |||||| |||||||||| |||||| ||||||    
T  7570376 ttcgagaatatcactttccataaatttagtttatggtggttgtgataagaataa 7570429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 18473046 - 18472888
Alignment:
Q  20 tgggggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaa 119  Q
    ||||||||| | ||||||||||||||||| |||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||      |||||    
T  18473046 tgggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataat------agtaa 18472953  T
Q  120 ttattatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataa 185  Q
    |||||| ||||||||| ||||||||||| ||||| |||||||||||| |||| |||||| ||||||    
T  18472952 ttatta-ttttattcgagaatatcactttccataaatttagcttatgatggttgtgataagaataa 18472888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 32 - 185
Target Start/End: Original strand, 39774893 - 39775039
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattattttta 131  Q
    |||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||      |||||||||||| |||||    
T  39774893 ataaaatagaacacacatattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataa------tagtaattatta-tttta 39774985  T
Q  132 ttcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataa 185  Q
    |||| ||||||||||| ||||| |||||||||||| |||| |||||| ||||||    
T  39774986 ttcgagaatatcactttccataaatttagcttatgatggttgtgataagaataa 39775039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 55326817 - 55326659
Alignment:
Q  20 tgggggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaa 119  Q
    ||||||||| | ||||||||||||||||| |||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||          
T  55326817 tgggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagtag------ 55326724  T
Q  120 ttattatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataa 185  Q
    |||||| ||||||||| ||||||||||| | ||| ||||||||||||||||| |||||| ||||||    
T  55326723 ttatta-ttttattcgagaatatcactttcgataaatttagcttatggtggttgtgataagaataa 55326659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 274 - 481
Target Start/End: Complemental strand, 11399880 - 11399671
Alignment:
Q  274 gtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcattaggaataaaagagtacttttaagatcatagttc 373  Q
    |||||||||||||||  ||| |||||| || |||||| |||| || ||  |||||||||||| |||| | |||||||  ||| ||||||||||||||| |    
T  11399880 gtataatgtcccttcgaaattaagaaaggtattaaaagcataatctcttcgataatgtatgtccattcgtaataaaac-gtagttttaagatcatagtcc 11399782  T
Q  374 cttcgagaacaataatgtctcatcgaaattaagaatgatcttaacggtatataaatattctttcaa---tgtttttctatttgagaagaaattaaaaagt 470  Q
    |||   |||||||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||   | ||||||| |||||| ||| ||||||||||    
T  11399781 cttttggaacaataatgtctgatcgaaattaagaatgatcttaacagtatataaatattgtttcaatattttttttctttttgaggagagattaaaaagt 11399682  T
Q  471 caaaatggtgg 481  Q
    | |||||||||    
T  11399681 cgaaatggtgg 11399671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 55 - 236
Target Start/End: Original strand, 12111676 - 12111861
Alignment:
Q  55 taatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattatttttattcgtgaatatcacttccca--- 151  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||||||      ||||||||||||||||||||||||||||||||||||||       
T  12111676 taatgtttaaatttcggtatttaattttaaatgcttgataatgataaaaataa------tagtaattattatttttattcgtgaatatcacttcccataa 12111769  T
Q  152 -tacatttagcttatggtggtagtg------ataggaataagaataagaattcaattgaatttcttatttttccttcattcaaatacaatga 236  Q
     || ||||||||||||||| | |||      ||| ||||| ||||||||||| ||||||||||||||| ||| |||| ||||||| ||||||    
T  12111770 ttaaatttagcttatggtgattgtgctaagaatatgaatatgaataagaatttaattgaatttcttatatttacttcgttcaaatccaatga 12111861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 32 - 185
Target Start/End: Complemental strand, 18468240 - 18468094
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattattttta 131  Q
    |||| |||||||||||| |||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||      ||||||||||| |||||    
T  18468240 ataatatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataat------agtaattatta-tttta 18468148  T
Q  132 ttcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataa 185  Q
     ||| ||||||||||| ||||| ||||||||||||||||| |||||| ||||||    
T  18468147 atcgagaatatcactttccataaatttagcttatggtggttgtgataagaataa 18468094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 32 - 185
Target Start/End: Original strand, 23665189 - 23665335
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattattttta 131  Q
    ||||||||||||||||| |||| || ||||||||||| ||||||||||||||||||||||||| ||||||||||||      |||||||||||| |||||    
T  23665189 ataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgatagtgataaaaataa------tagtaattatta-tttta 23665281  T
Q  132 ttcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataa 185  Q
    || | ||||||||||| ||||| ||||||||||||||||| |||||| ||||||    
T  23665282 ttagagaatatcactttccataaatttagcttatggtggttgtgataagaataa 23665335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 32 - 185
Target Start/End: Original strand, 23660557 - 23660703
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattattttta 131  Q
    |||||||| |||||||| |||| || ||||||||||| ||||||||||||||||||||||||| ||||||||||||      |||||||||||| |||||    
T  23660557 ataaaataaaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgatagtgataaaaataa------tagtaattatta-tttta 23660649  T
Q  132 ttcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataa 185  Q
    || | ||||||||||| ||||| ||||||||||||||||| |||||| ||||||    
T  23660650 ttagagaatatcactttccataaatttagcttatggtggttgtgataagaataa 23660703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 20 - 183
Target Start/End: Complemental strand, 55432265 - 55432110
Alignment:
Q  20 tgggggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaa 119  Q
    ||||||||| | | ||||||||||||||||  || || |||||||||||| ||||||||||||||||| ||||||||||||||||| |      || |||    
T  55432265 tgggggtcccacacaaaatagaacacacat--tagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaatta------tattaa 55432174  T
Q  120 ttattatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaat 183  Q
    |||||||||||||||| |||||||| |||||||| ||||| ||||||||||| |||||| ||||    
T  55432173 ttattatttttattcgagaatatcatttcccataaatttaacttatggtggttgtgataagaat 55432110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 58 - 229
Target Start/End: Original strand, 12964977 - 12965136
Alignment:
Q  58 tgtttaaattgcggtatttaatttt-aaatacttgataatgataaaaataatagtagtagtaattattatttttattcgtgaatatcacttcccatacat 156  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||||      |||||||||||| |||||| | | |||||||||||||||| ||    
T  12964977 tgtttaaattgcggtatttaattttaaaatatttgataatgataaaaataa------tagtaattatta-ttttatacataaatatcacttcccataaat 12965069  T
Q  157 ttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttccttcattcaaat 229  Q
    |||||||||| |||  |||      ||||||||||||||| |||| |||||||||| ||||||||||||||||    
T  12965070 ttagcttatgatggatgtg------ataagaataagaatttaattcaatttcttatatttccttcattcaaat 12965136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 22 - 185
Target Start/End: Complemental strand, 27709967 - 27709813
Alignment:
Q  22 ggggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaatt 121  Q
    ||||||| | ||||||||||||| || |  || || ||||||||||| |||||||||||||||||||||||||||||||||||||||      |||||||    
T  27709967 ggggtcccacataaaatagaacatacgt--tagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataat------agtaatt 27709876  T
Q  122 attatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataa 185  Q
    |||| ||||||||| |||||||||||  |||| |||||| |||||||||| |||||| ||||||    
T  27709875 atta-ttttattcgagaatatcacttttcataaatttagtttatggtggttgtgataagaataa 27709813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 32 - 185
Target Start/End: Original strand, 757432 - 757576
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattattttta 131  Q
    ||||||||||||||||| |||| || ||||||||||| ||||||||| ||||||||||||||||||||||||||||      ||||||||||||||||      
T  757432 ataaaatagaacacacacattagtagtgtttaaattgtggtatttaa-tttaaatacttgataatgataaaaataa------tagtaattattatttt-- 757522  T
Q  132 ttcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataa 185  Q
     | | ||||||||||| ||||| |||||| |||||||||| |||||| ||||||    
T  757523 atagagaatatcactttccataaatttagtttatggtggttgtgataagaataa 757576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 348 - 521
Target Start/End: Complemental strand, 3419449 - 3419276
Alignment:
Q  348 aaagagtacttttaagatcatagttccttcg-agaacaataatgtctcatcgaaattaagaatgatcttaacggtatataaatattctttcaatgttttt 446  Q
    |||||||| | ||||||||||||| ||||   |||| ||||||||| | ||| ||||||||||||||||||| ||||||||||||||||||||| |||      
T  3419449 aaagagtattattaagatcatagtccctttttagaataataatgtcccgtcggaattaagaatgatcttaacagtatataaatattctttcaatattt-- 3419352  T
Q  447 ctatttgagaagaaattaaaaagtcaaaatggtggcatcatcatatttgaatgattgtagtgt--catattgatatt 521  Q
     || ||||| |||||||||||||| |||||||||| |||| ||||||| | || | |||||||  ||||||||||||    
T  3419351 -taattgaggagaaattaaaaagtgaaaatggtggtatcaccatatttaagtggtcgtagtgtgccatattgatatt 3419276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 114 - 229
Target Start/End: Complemental strand, 3419945 - 3419836
Alignment:
Q  114 tagtaattattatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatt 213  Q
    |||||||||||||||||||||| |||||||||||| |||| ||||||| |||||| || |||      ||||||||||||||| |||||||||||||||     
T  3419945 tagtaattattatttttattcgagaatatcacttcgcataaatttagcatatggtagttgtg------ataagaataagaatttaattgaatttcttata 3419852  T
Q  214 tttccttcattcaaat 229  Q
    ||||||||||||||||    
T  3419851 tttccttcattcaaat 3419836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 348 - 521
Target Start/End: Original strand, 3656878 - 3657050
Alignment:
Q  348 aaagagtacttttaagatcatagttccttcgag-aacaataatgtctcatcgaaattaagaatgatcttaacggtatataaatattctttcaatgttttt 446  Q
    |||||||||| ||||||||||| | ||||   | || ||||||||| | ||| ||||||||| |||||||| |||||||||||||| ||| ||| |||||    
T  3656878 aaagagtactgttaagatcataatccctttttggaataataatgtcccgtcggaattaagaacgatcttaaaggtatataaatattatttgaatattttt 3656977  T
Q  447 ctatttgagaagaaattaaaaagtcaaaatggtggcatcatcatatttgaatgattgtagtgtcatattgatatt 521  Q
    ||| ||||| ||||||||||||||  ||||||||| |||  ||||||||| || | |||||| ||||||||||||    
T  3656978 ctaattgaggagaaattaaaaagtggaaatggtggtatc--catatttgagtggtcgtagtgccatattgatatt 3657050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 240 - 462
Target Start/End: Complemental strand, 18467777 - 18467553
Alignment:
Q  240 aataagagtgttcttat-accttagtctctcttctgtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttca 338  Q
    ||||||||||||||||  | | ||||| || ||| || |||||||||||| |||| |||||  ||||||||| ||||||||||  |||||| ||||| |     
T  18467777 aataagagtgttcttaagatcatagtcccttttcggtttaatgtcccttcggaattaagaatggtcttaaaa-catagtcccttcgataatatatgtccc 18467679  T
Q  339 ttaggaataaaagagtacttttaagatcatagttcct-tcgagaacaataatgtctcatcgaaattaagaatgatcttaacgg--tatataaatattctt 435  Q
    ||  ||||||| ||||||||||||||||||||| ||| |   ||| || |||||| | ||| |||||||||||||||||||||  |||||||| | | ||    
T  18467678 ttcagaataaa-gagtacttttaagatcatagtccctatttggaataacaatgtcccgtcggaattaagaatgatcttaacggtatatataaaaagtatt 18467580  T
Q  436 tcaatgtttttctatttgagaagaaat 462  Q
    ||||| |||||||||||||| ||||||    
T  18467579 tcaatatttttctatttgaggagaaat 18467553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 240 - 462
Target Start/End: Complemental strand, 18472559 - 18472335
Alignment:
Q  240 aataagagtgttcttat-accttagtctctcttctgtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttca 338  Q
    ||||||||||||||||  ||| ||||| || ||| || |||||||||||| |||| |||||  ||||||||| ||||||||||  |||||| ||||| |     
T  18472559 aataagagtgttcttaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatggtcttaaaa-catagtcccttcgataatatatgtccc 18472461  T
Q  339 ttaggaataaaagagtacttttaagatcatagttcct-tcgagaacaataatgtctcatcgaaattaagaatgatcttaacgg--tatataaatattctt 435  Q
    ||  ||||||| ||||||||||||||| ||||| ||| |   ||| || |||||| | |||||||||||||||||||||||||  |||||||| | | ||    
T  18472460 tttagaataaa-gagtacttttaagatgatagtccctatttggaataacaatgtcccgtcgaaattaagaatgatcttaacggtatatataaaaagtatt 18472362  T
Q  436 tcaatgtttttctatttgagaagaaat 462  Q
    | ||| |||||||||||||| ||||||    
T  18472361 ttaatatttttctatttgaggagaaat 18472335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 277 - 426
Target Start/End: Original strand, 757947 - 758096
Alignment:
Q  277 taatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcattaggaataaaagagtacttttaagatcatagttcct- 375  Q
    |||||||||||| |||| |||||  ||||||||||||||||||||  |||||| ||||| | ||  | || |||||||||||||||||||||||| |||     
T  757947 taatgtcccttcggaattaagaatggtcttaaaaacatagtcccttcgataatatatgtcccttcag-attaaagagtacttttaagatcatagtcccta 758045  T
Q  376 tcgagaacaataatgtctcatcgaaattaagaatgatcttaacggtatata 426  Q
    |   ||| || |||||| | |||||||||||||||||||||||||||||||    
T  758046 tttggaagaacaatgtcccgtcgaaattaagaatgatcttaacggtatata 758096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 240 - 462
Target Start/End: Original strand, 14438242 - 14438464
Alignment:
Q  240 aataagagtgttcttat-accttagtctctcttctgtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttca 338  Q
    ||||||||| ||||||  ||| ||||| || ||| || |||||||||||| |||| |||||  ||||||||||||||||||||  |||||   ||||||     
T  14438242 aataagagtattcttaagaccatagtcccttttcggtttaatgtcccttcggaattaagaatggtcttaaaaacatagtcccttcgataa---atgttcc 14438338  T
Q  339 ttaggaataaaagagtacttttaagatcatagttcct-tcgagaacaataatgtctcatcgaaattaagaatgatcttaacgg--tatataaatattctt 435  Q
    ||  |||| |||||||||||||||||||||||| ||| |   ||| || |||||| | ||| ||||||||||||||||||| |  |||||||| | | ||    
T  14438339 ttcagaat-aaagagtacttttaagatcatagtccctatttggaataacaatgtcccgtcggaattaagaatgatcttaacagtatatataaaaagtatt 14438437  T
Q  436 tcaatgtttttctatttgagaagaaat 462  Q
    ||||| |||||||||||||| ||||||    
T  14438438 tcaatatttttctatttgaggagaaat 14438464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 424 - 519
Target Start/End: Original strand, 10708390 - 10708485
Alignment:
Q  424 ataaatattctttcaatgtttttctatttgagaagaaattaaaaagtcaaaatggtggcatcatcatatttgaatgattgtagtgtcatattgata 519  Q
    ||||||||||||||||| |||||||||||||| ||||||||| ||||| ||||||||| |||| ||||||||| || | |||||  ||||||||||    
T  10708390 ataaatattctttcaatatttttctatttgaggagaaattaataagtcgaaatggtggtatcaccatatttgagtgctcgtagtaccatattgata 10708485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 398 - 520
Target Start/End: Original strand, 12112367 - 12112490
Alignment:
Q  398 gaaattaagaatgatcttaacggtatataaatattctttcaatgtttttctatttgagaag-aaattaaaaagtcaaaatggtggcatcatcatatttga 496  Q
    ||||||||||||||||||||||||||||||||||| ||| ||| |||||||| |||||| | ||| |||||| || ||||||| | |||| |||||||||    
T  12112367 gaaattaagaatgatcttaacggtatataaatattattttaatatttttctacttgagaggaaaaataaaaaatcgaaatggtagaatcaccatatttga 12112466  T
Q  497 atgattgtagtgtcatattgatat 520  Q
      | | |||||| |||||||||||    
T  12112467 ggggtcgtagtgccatattgatat 12112490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 276 - 521
Target Start/End: Original strand, 25726355 - 25726600
Alignment:
Q  276 ataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcattaggaataaaagagtacttttaagatcatagttcc- 374  Q
    |||||||||||||  | | |||||| ||||||| ||||||||||||  |||||| ||||| | || | |||||| |||||||| | |||||||||| |      
T  25726355 ataatgtcccttcgaagttaagaaatgtcttaagaacatagtcccttcgataatatatgtccctttgaaataaa-gagtacttatcagatcatagtccaa 25726453  T
Q  375 -ttcgagaacaataatgtctcatcgaaattaagaatgatcttaacggtatataaatattctttcaatgtttttctatttgagaagaaattaaaaagtcaa 473  Q
     || || || ||||| ||  | ||| ||||||||||||||||||   |||||||||||||||||||| |||||||| |   | | || ||||||||| |     
T  25726454 ttttga-aataataacgttccgtcggaattaagaatgatcttaatattatataaatattctttcaatatttttctactcttggaaaagttaaaaagttag 25726552  T
Q  474 aatggtggcatcatcatatttgaatgattgtagtgtcatattgatatt 521  Q
    |||||||| |||| |||||||||||| | |||||  ||||||||||||    
T  25726553 aatggtggtatcaccatatttgaatggtcgtagtaccatattgatatt 25726600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 277 - 463
Target Start/End: Complemental strand, 46964524 - 46964338
Alignment:
Q  277 taatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcattaggaataaaagagtacttttaagatcatagttcct- 375  Q
    |||||||||||  |||| |||||  ||||||||||||||||| ||  |||||| ||||| | ||  ||||||| ||||||||||||||||||| ||  |     
T  46964524 taatgtccctttagaattaagaatggtcttaaaaacatagtctcttcgataatatatgtcccttcagaataaa-gagtacttttaagatcataatttata 46964426  T
Q  376 tcgagaacaataatgtctcatcgaaattaagaatgatcttaacggtatataaatattctttcaatgtttttctatttgagaagaaatt 463  Q
    |   ||| |  |||||| | ||| ||||||||||||||||||| ||||||||| ||| ||||||| |||||||||||||  |||||||    
T  46964425 tttggaatagcaatgtcccgtcggaattaagaatgatcttaacagtatataaaaattatttcaatatttttctatttgaagagaaatt 46964338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 32 - 109
Target Start/End: Complemental strand, 29351255 - 29351178
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataata 109  Q
    |||||||| |||||||| ||||||| ||||||||| | ||||||||||||||||||  |||||||||| |||||||||    
T  29351255 ataaaataaaacacacacattattagtgtttaaatagtggtatttaattttaaatatctgataatgatgaaaataata 29351178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 242 - 426
Target Start/End: Original strand, 23661010 - 23661192
Alignment:
Q  242 taagagtgttcttat-accttagtctctcttctgtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcatt 340  Q
    ||||||||||||||  ||| ||||| || ||| || |||||||||||| |||| |||||  ||||||||||||||||||||  |||||   |||| | ||    
T  23661010 taagagtgttcttaagaccatagtcgcttttcggtttaatgtcccttcggaattaagaatggtcttaaaaacatagtcccttcgataa---atgtccctt 23661106  T
Q  341 aggaataaaagagtacttttaagatcatagttcct-tcgagaacaataatgtctcatcgaaattaagaatgatcttaacggtatata 426  Q
      |||| ||||| |||||||||||||||||| ||| |   ||| || |||||| | ||| |||||||||||||||||||||||||||    
T  23661107 cagaat-aaagaatacttttaagatcatagtccctatttggaagaacaatgtcccgtcggaattaagaatgatcttaacggtatata 23661192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 22 - 109
Target Start/End: Original strand, 3656315 - 3656402
Alignment:
Q  22 ggggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataata 109  Q
    ||||||| | ||||||||||||||  | |||| || ||||||||| | ||||||||||||||||||| |||||||||| |||||||||    
T  3656315 ggggtcccacataaaatagaacacggacattagtagtgtttaaatagtggtatttaattttaaatacctgataatgatgaaaataata 3656402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 386 - 519
Target Start/End: Complemental strand, 20520469 - 20520339
Alignment:
Q  386 taatgtctcatcgaaattaagaatgatcttaacggtatataaatattctttcaatgtttttctatttgagaagaaattaaaaagtcaaaatggtggcatc 485  Q
    ||||||| | ||| ||||||||||||||||||||| ||||||||||||||||||| |||    | ||||| ||||||||||||||  |||||| |  |||    
T  20520469 taatgtcccttcggaattaagaatgatcttaacggaatataaatattctttcaatattt---aaattgaggagaaattaaaaagttgaaatggcgatatc 20520373  T
Q  486 atcatatttgaatgattgtagtgtcatattgata 519  Q
    | ||||||||| || | ||||||  |||||||||    
T  20520372 accatatttgagtggtcgtagtgcaatattgata 20520339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 240 - 376
Target Start/End: Original strand, 10708245 - 10708381
Alignment:
Q  240 aataagagtgttcttat-accttagtctctcttctgtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttca 338  Q
    |||||||||||| |||  |||||||| ||| ||| ||||||||||||||  |||| || ||| || |||||||||||| ||||  |||||| ||||| ||    
T  10708245 aataagagtgtttttaagaccttagtttctgttcggtataatgtccctttggaattaaaaaaggttttaaaaacatagccccttcgataatatatgtcca 10708344  T
Q  339 ttaggaataaaagagtacttttaagatcatagttcctt 376  Q
    || ||||||||| |||| | ||||||||||||| ||||    
T  10708345 ttcggaataaaa-agtattattaagatcatagtccctt 10708381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 242 - 426
Target Start/End: Original strand, 24037917 - 24038099
Alignment:
Q  242 taagagtgttcttat-accttagtctctcttctgtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcatt 340  Q
    ||||||||||||||  ||| ||||| || ||| || |||||||||||| |||| |||||  ||||||||||||||||||||  |||||   |||| | ||    
T  24037917 taagagtgttcttaagaccatagtcgcttttcggtttaatgtcccttcggaattaagaatggtcttaaaaacatagtcccttcgataa---atgtccctt 24038013  T
Q  341 aggaataaaagagtacttttaagatcatagttcct-tcgagaacaataatgtctcatcgaaattaagaatgatcttaacggtatata 426  Q
      |||| ||||| |||||||||||||||||| ||| |   ||| || |||||| | ||| ||||||||||||||| |||||||||||    
T  24038014 cagaat-aaagaatacttttaagatcatagtccctatttggaagaacaatgtcccgtcggaattaagaatgatctaaacggtatata 24038099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 348 - 462
Target Start/End: Original strand, 2207397 - 2207514
Alignment:
Q  348 aaagagtacttttaagatcatagttcct-tcgagaacaataatgtctcatcgaaattaagaatgatcttaacgg--tatataaatattctttcaatgttt 444  Q
    ||||||||||||||||||||| || ||| |   ||| || |||||| | |||||||||||||||||||||||||  |||||||| | | ||||||  |||    
T  2207397 aaagagtacttttaagatcatggtccctgtttggaataacaatgtcccgtcgaaattaagaatgatcttaacggtatatataaaaagtatttcaacattt 2207496  T
Q  445 ttctatttgagaagaaat 462  Q
    ||||||||||| ||||||    
T  2207497 ttctatttgaggagaaat 2207514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 277 - 426
Target Start/End: Original strand, 39775308 - 39775456
Alignment:
Q  277 taatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcattaggaataaaagagtacttttaagatcatagt-tcct 375  Q
    |||||||||||| |||| |||||  ||||||||| |||||||| || |||||| ||||| | ||  |||||||  |||||||||||||||||||| ||      
T  39775308 taatgtcccttcggaattaagaatggtcttaaaa-catagtccttgcgataatatatgtcccttcagaataaat-agtacttttaagatcatagtctcta 39775405  T
Q  376 tcgagaacaataatgtctcatcgaaattaagaatgatcttaacggtatata 426  Q
    |   ||| || |||||| | ||| |||||||||||||||||||||||||||    
T  39775406 tttggaataacaatgtcccgtcggaattaagaatgatcttaacggtatata 39775456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 348 - 462
Target Start/End: Complemental strand, 55326221 - 55326104
Alignment:
Q  348 aaagagtacttttaagatcatagttcct-tcgagaacaataatgtctcatcgaaattaagaatgatcttaacgg--tatataaatattctttcaatgttt 444  Q
    |||||||||||||||||||||||| ||| |   ||| || |||||| | ||| ||||||||||||||||||| |  |||||||| | | ||||||| |||    
T  55326221 aaagagtacttttaagatcatagtccctatttggaataacaatgtcccgtcggaattaagaatgatcttaacagtatatataaaaagtatttcaatattt 55326122  T
Q  445 ttctatttgagaagaaat 462  Q
    ||||||||||| ||||||    
T  55326121 ttctatttgaggagaaat 55326104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 277 - 426
Target Start/End: Original strand, 23665705 - 23665851
Alignment:
Q  277 taatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcattaggaataaaagagtacttttaagatcatagttcct- 375  Q
    |||||||||||| |||| |||||  ||||||||||||||||||||  |||||   |||| | ||  |||| ||||| |||||||||||||||||| |||     
T  23665705 taatgtcccttcggaattaagaatggtcttaaaaacatagtcccttcgataa---atgtcccttcagaat-aaagaatacttttaagatcatagtcccta 23665800  T
Q  376 tcgagaacaataatgtctcatcgaaattaagaatgatcttaacggtatata 426  Q
    |   ||| || |||||| | ||| ||||||||||||||| |||||||||||    
T  23665801 tttggaagaacaatgtcccgtcggaattaagaatgatctaaacggtatata 23665851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 277 - 462
Target Start/End: Complemental strand, 27709444 - 27709260
Alignment:
Q  277 taatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcattaggaataaaagagtacttttaagatcatagttcct- 375  Q
    ||||||| |||| |||| |||||  ||||||||||||||||||||  |||||   |||| | ||  ||||||| ||||| |||||||||||||||  ||     
T  27709444 taatgtctcttcggaattaagaatggtcttaaaaacatagtcccttcgataa---atgtcccttcagaataaa-gagtatttttaagatcatagtctcta 27709349  T
Q  376 tcgagaacaataatgtctcatcgaaattaagaatgatcttaacggta--tataaatattctttcaatgtttttctatttgagaagaaat 462  Q
    |   ||| || |||||| | ||| |||||||||||||||||||||||  |||||| | | ||| ||| |||||||||||||| ||||||    
T  27709348 tttggaataacaatgtcccgtcggaattaagaatgatcttaacggtatatataaaaagtattttaatatttttctatttgaggagaaat 27709260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 131 - 185
Target Start/End: Original strand, 32473183 - 32473237
Alignment:
Q  131 attcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataa 185  Q
    ||||| ||||||||||| ||||| ||||||||||||||||| |||||| ||||||    
T  32473183 attcgagaatatcactttccataaatttagcttatggtggttgtgataagaataa 32473237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 32 - 104
Target Start/End: Complemental strand, 7860736 - 7860663
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaa-ttttaaatacttgataatgataaaaa 104  Q
    ||||||||||||||||| |||| || ||||||||||  ||||||||| |||||||||  | |||||||||||||    
T  7860736 ataaaatagaacacacacattaatagtgtttaaattatggtatttaatttttaaatatcttataatgataaaaa 7860663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 242 - 493
Target Start/End: Original strand, 17025648 - 17025902
Alignment:
Q  242 taagagtgttcttat-accttagtctctcttctgtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcatt 340  Q
    ||||||||||||||  ||||| |||  | ||| ||||| | |||||||  ||| ||||||  |||||| |||||||| |||  |||||| ||||| | ||    
T  17025648 taagagtgttcttaagaccttcgtccatgttcggtatattatcccttcgaaattaagaaagttcttaagaacatagttccttcgataatatatgtccctt 17025747  T
Q  341 aggaataaaagagtacttttaagatcatagttccttcgag-aacaataatgtctcatcgaaattaagaatgatcttaacggtatataaa--tattctttc 437  Q
      |||||||| |||| |||||||| |||||| ||||   | ||  |||||||| | |||  ||||||||||||||| || |||||||||  |||||||||    
T  17025748 cagaataaaa-agtatttttaagaccatagtccctttttgtaatgataatgtcccgtcgggattaagaatgatctttacagtatataaaaatattctttc 17025846  T
Q  438 aatgtttttctatttgagaagaaattaaaaagtcaaaatggtggcatcatcatatt 493  Q
     || | |||||| ||  |||||| ||||||| ||| |||||||| ||||| |||||    
T  17025847 gatatctttctacttttgaagaagttaaaaaatcagaatggtggtatcattatatt 17025902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 463
Target Start/End: Complemental strand, 55431720 - 55431642
Alignment:
Q  387 aatgtctcatcgaaattaagaatgatcttaacgg--tatataaatattctttcaatgtttttctatttgagaagaaatt 463  Q
    |||||| | ||| ||||||||||||||||||| |  |||||||| | | ||||||| |||||||||||||| |||||||    
T  55431720 aatgtcccgtcggaattaagaatgatcttaacagtatatataaaaagtatttcaatatttttctatttgaggagaaatt 55431642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 32 - 86
Target Start/End: Complemental strand, 3426101 - 3426047
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaat 86  Q
    |||||||||||| |||| |||| || |||||||| ||||||||| ||||||||||    
T  3426101 ataaaatagaactcacacattagtagtgtttaaactgcggtattcaattttaaat 3426047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 242 - 329
Target Start/End: Complemental strand, 3673112 - 3673024
Alignment:
Q  242 taagagtgttcttat-accttagtctctcttctgtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataat 329  Q
    ||||||||||||||  ||| ||||| || ||| || |||||||||||| |||| |||||  ||||||| | |||||||||| |||||||    
T  3673112 taagagtgttcttaagaccatagtcccttttcggtttaatgtcccttcggaattaagaatggtcttaacagcatagtccctttgataat 3673024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 107; Significance: 2e-53; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 21 - 229
Target Start/End: Original strand, 19798052 - 19798248
Alignment:
Q  21 gggggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaat 120  Q
    |||||||| | |||||||||||| | ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||      |||||||    
T  19798052 gggggtcccacataaaatagaactcgcatattagtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaataa------tagtaat 19798145  T
Q  121 tattatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttcctt 220  Q
     |||||||||||| | ||||||||||||||||| ||||||||||||||||| |||      ||||||||||||||| |||| |||||||||| |||||||    
T  19798146 aattatttttatttgagaatatcacttcccataaatttagcttatggtggttgtg------ataagaataagaatttaatttaatttcttatatttcctt 19798239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 32 - 239
Target Start/End: Complemental strand, 11807247 - 11807047
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattattttta 131  Q
    ||||||||||||||||| ||||  | ||||||||||| ||||||||| ||||||||||||||||||||||||| |||| ||      |||||||||||||    
T  11807247 ataaaatagaacacacacattagcagtgtttaaattgtggtatttaaatttaaatacttgataatgataaaaacaatatta------attattattttta 11807154  T
Q  132 ttcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttccttcattcaaatac 231  Q
    |||  |||||||| |||||||| ||||||||||||||||| |||||| |||||| |||||||||||||||||| ||||||| |||| ||||||||||| |    
T  11807153 ttccggaatatcatttcccataaatttagcttatggtggttgtgataagaataaaaataagaattcaattgaa-ttcttatctttctttcattcaaatcc 11807055  T
Q  232 aatgagtt 239  Q
    ||||||||    
T  11807054 aatgagtt 11807047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 21 - 234
Target Start/End: Original strand, 16648687 - 16648888
Alignment:
Q  21 gggggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaat 120  Q
    |||||||| | ||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||      |||||||    
T  16648687 gggggtcccacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaataa------tagtaat 16648780  T
Q  121 tattatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttcctt 220  Q
    |||||||||||||||  |||||||||| ||||| ||||| |||| |||||| |||      |||||||||| |||| || | |||||||||| |||||||    
T  16648781 tattatttttattcgataatatcactttccataaatttaacttacggtggttgtg------ataagaataaaaatttaactaaatttcttatatttcctt 16648874  T
Q  221 cattcaaatacaat 234  Q
    ||||||||| ||||    
T  16648875 cattcaaatccaat 16648888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 10136365 - 10136207
Alignment:
Q  20 tgggggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaa 119  Q
    ||||||||| | ||||||||||||||||| |||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||      |||||    
T  10136365 tgggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataat------agtaa 10136272  T
Q  120 ttattatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataa 185  Q
    |||||| ||||||||| ||||||||||| ||||| ||||||||||||||||| |||||| ||||||    
T  10136271 ttatta-ttttattcgagaatatcactttccataaatttagcttatggtggttgtgataagaataa 10136207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 240 - 519
Target Start/End: Complemental strand, 16036173 - 16035894
Alignment:
Q  240 aataagagtgttcttat-accttagtctctcttctgtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttca 338  Q
    ||||||||||||||||  ||||||||| || ||| ||||||||| | |||  ||| || ||| ||||| |||||||||||| |  || ||||||||| |     
T  16036173 aataagagtgttcttaagaccttagtccctattcagtataatgttc-ttcgcaattaataaaggtcttgaaaacatagtccattcgagaatgtatgtccc 16036075  T
Q  339 ttaggaataaaagagtacttttaagatcatagt-tccttcgagaacaataatgtctcatcgaaattaagaatgatcttaacggtatataaatattctttc 437  Q
    || | |||||| ||||||||||||||||||||| || ||   ||||||||||||| | ||  ||||||||||||||||||  ||||||||||||||||||    
T  16036074 ttcgaaataaa-gagtacttttaagatcatagtctcttttcggaacaataatgtcccttccgaattaagaatgatcttaatagtatataaatattctttc 16035976  T
Q  438 aatgtttttctatttgagaagaaattaaaaagtcaaaatggtggcatcatcatatttgaatgattgtagtgtcatattgata 519  Q
    ||| |||||||||||||| |||||| ||||| |  ||||||||| |||| ||||||||| || | |||||  ||||||||||    
T  16035975 aatatttttctatttgaggagaaataaaaaatttgaaatggtggtatcaccatatttgagtggtcgtagtaccatattgata 16035894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 277 - 521
Target Start/End: Complemental strand, 38621220 - 38620977
Alignment:
Q  277 taatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcattaggaataaaagagtacttttaagatcatagttcctt 376  Q
    |||||||||||| |||| || ||   ||||||||||||||||||| ||||||| || || | || |||||||| || |||| ||||||||||||| ||||    
T  38621220 taatgtcccttcagaattaataatgctcttaaaaacatagtccctttgataatataagtcccttcggaataaa-gattactattaagatcatagtccctt 38621122  T
Q  377 cgagaacaataatgtctcatcgaaattaagaatgatcttaacggtatataaatattctttcaatgttttt-ctatttgagaagaaattaaaaagtcaaaa 475  Q
        || ||||||||| | ||| |||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||| | ||||||||||||| |||    
T  38621121 ttgaaataataatgtcccgtcggaattaagaatgatcttaacggtatataaat-ttctttcaatattttttctatttgaggataaattaaaaagtcgaaa 38621023  T
Q  476 tggtggcatcatcatatttgaatgattgtagtgtcatattgatatt 521  Q
    || ||  || | ||||||||| |||| |||||| ||||||||||||    
T  38621022 tgttgttattaccatatttgagtgatcgtagtgccatattgatatt 38620977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 32 - 185
Target Start/End: Complemental strand, 25844784 - 25844638
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattattttta 131  Q
    ||||||||||||||||| |||| || ||||||||||| ||||||||||||||||||||||||| |||||||||||||      ||||||||||| |||||    
T  25844784 ataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgatagtgataaaaataat------agtaattatta-tttta 25844692  T
Q  132 ttcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataa 185  Q
    || | ||||||||||| ||||| ||||||||||||||||| |||||| ||||||    
T  25844691 ttagagaatatcactttccataaatttagcttatggtggttgtgataagaataa 25844638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 35 - 185
Target Start/End: Original strand, 51040592 - 51040735
Alignment:
Q  35 aaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattatttttattc 134  Q
    |||||||||||||| |||| || ||||||||||| | ||||||||||||||||||||||||||||||||||||      |||||||||||| ||||||||    
T  51040592 aaatagaacacacacattagtagtgtttaaattgtgttatttaattttaaatacttgataatgataaaaataa------tagtaattatta-ttttattc 51040684  T
Q  135 gtgaatatcacttcccatacatttagcttatggtggtagtgataggaataa 185  Q
    | |||||||| || ||||| ||||||||||||||||| |||||| ||||||    
T  51040685 gagaatatcattttccataaatttagcttatggtggttgtgataagaataa 51040735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 277 - 519
Target Start/End: Original strand, 19798582 - 19798821
Alignment:
Q  277 taatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcattaggaataaaagagtacttttaagatcatagttcctt 376  Q
    ||||||||||||  ||| |||||  ||||| |||||||| |||||  |||||| || || | || |||||||| ||||||| | ||||||||||| ||||    
T  19798582 taatgtcccttcgaaattaagaatggtcttcaaaacataatcccttcgataatataagtcccttcggaataaa-gagtactatgaagatcatagtccctt 19798680  T
Q  377 cgag-aacaataatgtctcatcgaaattaagaatgatcttaacggtatataaatattctttcaatgtttttctatttgagaagaaattaaaaagtcaaaa 475  Q
       | || ||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||  ||   || ||||| ||||||||||||||  |||    
T  19798681 tttggaataataatgtcccgtcggaattaagaatgatcttaacggtatataaatattctttcaatactt---taattgaggagaaattaaaaagtggaaa 19798777  T
Q  476 tggtggcatcatcatatttgaatgattgtagtgtcatattgata 519  Q
    |||||| |||| ||||||||| || | |||||| ||||||||||    
T  19798778 tggtggtatcaccatatttgagtggtcgtagtgccatattgata 19798821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 58 - 185
Target Start/End: Complemental strand, 10141095 - 10140975
Alignment:
Q  58 tgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattatttttattcgtgaatatcacttcccatacatt 157  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||      ||||||||||| ||||||||| ||||||||||||||||| |||    
T  10141095 tgtttaaattgtggtatttaattttaaatacttgataatgataaaaataat------agtaattatta-ttttattcgagaatatcacttcccataaatt 10141003  T
Q  158 tagcttatggtggtagtgataggaataa 185  Q
    ||| ||||||| || |||||| ||||||    
T  10141002 tagtttatggtagttgtgataagaataa 10140975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 114 - 221
Target Start/End: Complemental strand, 8138585 - 8138474
Alignment:
Q  114 tagtaattattatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataa----gaattcaattgaatttct 209  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||| ||||||||||||    |||||||| ||||||||     
T  8138585 tagtaattattatttttattcgtgaatatcacttcccataaatttagcttatggtggtcgtaataagaataagaataagaatgaattcaactgaatttcc 8138486  T
Q  210 tatttttccttc 221  Q
    ||| ||||||||    
T  8138485 tatctttccttc 8138474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 22 - 178
Target Start/End: Complemental strand, 12261014 - 12260863
Alignment:
Q  22 ggggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaatt 121  Q
    ||||||| | ||||||||||||||||  |||| || ||||||||| | |||||||||||||||||||||||||||||||||||||||      |||||||    
T  12261014 ggggtcccacataaaatagaacacactcattagtagtgtttaaatagtggtatttaattttaaatacttgataatgataaaaataat------agtaatt 12260921  T
Q  122 atta-tttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgata 178  Q
    |||| ||||||||| || |||||||||| ||||  ||||||||||| |||| ||||||    
T  12260920 attattttttattcatggatatcacttctcataattttagcttatgttggttgtgata 12260863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 32 - 185
Target Start/End: Original strand, 26926786 - 26926934
Alignment:
Q  32 ataaaatagaacacacatattattaatgttt-aaattgcggtatttaatttt-aaatacttgataatgataaaaataatagtagtagtaattattatttt 129  Q
    ||||||||||||||||| |||| || ||||| |||||| ||||||||||||| |||||||||||||||||||||||||      |||||||||||| |||    
T  26926786 ataaaatagaacacacacattagtagtgttttaaattgtggtatttaatttttaaatacttgataatgataaaaataa------tagtaattatta-ttt 26926878  T
Q  130 tattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataa 185  Q
    |||||| | |||||||||  |||| ||||||||||||||||| |||||| ||||||    
T  26926879 tattcgagcatatcacttttcataaatttagcttatggtggttgtgataagaataa 26926934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 284 - 519
Target Start/End: Complemental strand, 40166495 - 40166267
Alignment:
Q  284 ccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcattaggaataaaagagtacttttaagatcatagttccttcgagaac 383  Q
    ||||| |||| |||||  |||||||||||||||||||| ||||||| || || | || ||||||||||  |||| ||||||||||||| ||||    ||     
T  40166495 ccttcggaattaagaatggtcttaaaaacatagtccctttgataatataagtcccttcggaataaaag--tactattaagatcatagtcccttttgaaat 40166398  T
Q  384 aataatgtctcatcgaaattaagaatgatcttaacggtatataaatattctttcaatgtttttctatttgagaagaaattaaaaagtcaaaatggtggca 483  Q
    ||||||||  | ||  ||||||||||||||||||| ||||||||||||||||||||| |||   || ||||| ||||||||||||||  |||  |||| |    
T  40166397 aataatgttccgtctgaattaagaatgatcttaacagtatataaatattctttcaatattt---taattgaggagaaattaaaaagtggaaa--gtggta 40166303  T
Q  484 tcatcatatttgaatgattgtagtgtcatattgata 519  Q
    ||| ||||||||| || | |||||| ||||||||||    
T  40166302 tcaccatatttgagtggtcgtagtgccatattgata 40166267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 82 - 229
Target Start/End: Original strand, 33300379 - 33300514
Alignment:
Q  82 taaatacttgataatgataaaaataatagtagtagtaattattatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgatagga 181  Q
    ||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||| ||| |||| ||||||||||| ||| | |||          
T  33300379 taaatacttgataatgataaaaataatagt------aattattatttttattcgtgaatatcaattctcataaatttagcttatcgtgtttgtg------ 33300466  T
Q  182 ataagaataagaattcaattgaatttcttatttttccttcattcaaat 229  Q
    ||||||||||||||| |||||||||| |||| ||| ||||||||||||    
T  33300467 ataagaataagaatttaattgaattttttatatttacttcattcaaat 33300514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 242 - 519
Target Start/End: Original strand, 39200307 - 39200574
Alignment:
Q  242 taagagtgttctta-taccttagtctctcttctgtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcatt 340  Q
    |||||||||||||| |||| ||||| || ||  || |||||||||||| |||| |||||  ||||||||||||||||||||  |||||| || || | ||    
T  39200307 taagagtgttcttaataccatagtccctttttggtttaatgtcccttcggaattaagaatggtcttaaaaacatagtcccttcgataatataagtccctt 39200406  T
Q  341 aggaataaaagagtacttttaagatcatagttccttcgagaacaataatgtctcatcgaaattaagaatgatcttaacggtatataaatattctttcaat 440  Q
     | ||| |||||||||| |||||||||| || ||||   ||| ||||||||| | |||       |||||||||||| ||||||||||||||||||||||    
T  39200407 cgaaat-aaagagtactattaagatcattgtcccttttggaataataatgtcccgtcg-------gaatgatcttaaaggtatataaatattctttcaat 39200498  T
Q  441 gtttttctatttgagaagaaattaaaaagtcaaaatggtggcatcatcatatttgaatgattgtagtgtcatattgata 519  Q
      ||   || ||||| ||||||||||||||  ||| ||||| |||| ||||||||| |||| ||| || ||||||||||    
T  39200499 actt---taattgaggagaaattaaaaagtggaaacggtggtatcaccatatttgagtgatcgtaatgccatattgata 39200574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 277 - 462
Target Start/End: Original strand, 51041091 - 51041277
Alignment:
Q  277 taatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcattaggaataaaagagtacttttaagatcatagttcct- 375  Q
    |||||||||||| |||| |||||  ||||||||| ||||||||||  |||||| ||||||| ||  ||||||| ||||||||||||||||||||| |||     
T  51041091 taatgtcccttcagaattaagaatggtcttaaaa-catagtcccttcgataatatatgttcctttagaataaa-gagtacttttaagatcatagtcccta 51041188  T
Q  376 tcgagaacaataatgtctcatcgaaattaagaatgatcttaacg--gtatataaatattctttcaatgtttttctatttgagaagaaat 462  Q
    |   ||| || |||||| ||||| ||||||||||||||||||||   |||||||| | | ||||||| |||||||||||||| ||||||    
T  51041189 tttggaataacaatgtcccatcggaattaagaatgatcttaacgatatatataaaaagtatttcaatatttttctatttgaggagaaat 51041277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 277 - 462
Target Start/End: Original strand, 33300827 - 33301012
Alignment:
Q  277 taatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcattaggaataaaagagtacttttaagatcatagttcc-- 374  Q
    |||||||||||| |||  |||||  ||||||||||||||||||||  |||||| ||||| | || ||||| |||||||||||||||||||||||| ||      
T  33300827 taatgtcccttcggaactaagaacggtcttaaaaacatagtcccttcgataatatatgtcccttcggaat-aaagagtacttttaagatcatagtcccta 33300925  T
Q  375 ttcgagaacaataatgtctcatcgaaattaagaatgatcttaacggtatataaatattctttcaatgtttttctatttgagaagaaat 462  Q
    || || || || |||||| | |||||||||| ||| ||||||| | |||||||| ||| ||||||| | |||||||||||| ||||||    
T  33300926 tttga-aataacaatgtcccgtcgaaattaaaaataatcttaaggttatataaaaattatttcaatatatttctatttgaggagaaat 33301012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 117 - 189
Target Start/End: Complemental strand, 38621661 - 38621589
Alignment:
Q  117 taattattatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaat 189  Q
    ||||||||||||||||| | ||||||||||||||||| ||||||||||||||||| |||||| ||||||||||    
T  38621661 taattattatttttatttgagaatatcacttcccataaatttagcttatggtggttgtgataagaataagaat 38621589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 32 - 112
Target Start/End: Complemental strand, 38622217 - 38622137
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagta 112  Q
    |||||||||||| ||||||||| || |||||||| ||| |||||| ||||| |||||||||||||||||||||||||||||    
T  38622217 ataaaatagaactcacatattagtagtgtttaaaatgcagtatttgattttgaatacttgataatgataaaaataatagta 38622137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 32 - 109
Target Start/End: Original strand, 23191905 - 23191982
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataata 109  Q
    ||||||||||||||||| |||| || ||||||| | | ||||||||||||||||||| ||||||||||||||||||||    
T  23191905 ataaaatagaacacacacattagtagtgtttaagtagtggtatttaattttaaatacctgataatgataaaaataata 23191982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 152
Target Start/End: Original strand, 47450269 - 47450375
Alignment:
Q  40 gaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattatttttattcgtgaa 139  Q
    |||||||  ||||| || |||||||| |||| ||||||||||||||||||||||||||||||||||||      || | ||||||||||||||||| |||    
T  47450269 gaacacaactattagtagtgtttaaactgcgttatttaattttaaatacttgataatgataaaaataa------taattattattatttttattcgagaa 47450362  T
Q  140 tatcacttcccat 152  Q
    |||||||| ||||    
T  47450363 tatcactttccat 47450375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 277 - 432
Target Start/End: Original strand, 47450807 - 47450962
Alignment:
Q  277 taatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcattaggaataaaagagtacttttaagatcatagttcct- 375  Q
    ||||| ||||||  ||| |||||  ||||||||||||||||| ||  |||||| ||||| | || |||||||| ||||||||||||||||||||| |||     
T  47450807 taatgccccttcaaaattaagaatggtcttaaaaacatagtctcttcgataatatatgtcccttcggaataaa-gagtacttttaagatcatagtcccta 47450905  T
Q  376 tcgagaacaataatgtctcatcgaaattaagaatgatcttaacggtatataaatatt 432  Q
    |   ||| || |||||| | ||| |||||||||||||||||| ||||||||||||||    
T  47450906 tttggaataacaatgtcccgtcggaattaagaatgatcttaatggtatataaatatt 47450962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 32 - 224
Target Start/End: Complemental strand, 16036634 - 16036453
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattatt-ttt 130  Q
    ||||||||||||||||| |||| || ||||||||| | ||||||||| ||||||||| |||||||||| |||||||      || | ||||||||| |||    
T  16036634 ataaaatagaacacacacattagtagtgtttaaatagtggtatttaaatttaaatacctgataatgatgaaaataa------taattattattattcttt 16036541  T
Q  131 attcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttccttcatt 224  Q
    |||| |||||||||||| |||||  ||||| ||||| | || |||      |||||| | ||||| ||| |||||||||||| |||||||||||    
T  16036540 attcatgaatatcactttccataattttaggttatgtttgttgtg------ataagattgagaatccaactgaatttcttatctttccttcatt 16036453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 22 - 109
Target Start/End: Complemental strand, 40166978 - 40166891
Alignment:
Q  22 ggggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataata 109  Q
    ||||||| ||||||||||||| ||||| || | || ||||||||  | ||||||||||||||||||| ||||||||||||||||||||    
T  40166978 ggggtcccaaataaaatagaagacacacatcagtagtgtttaaacagtggtatttaattttaaatacctgataatgataaaaataata 40166891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 240 - 462
Target Start/End: Complemental strand, 10135878 - 10135656
Alignment:
Q  240 aataagagtgttcttat-accttagtctctcttctgtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttca 338  Q
    ||||||||| ||||||  ||| ||||| || ||| || |||||||||||| |||| |||||  ||||||||||||||||||||  |||||   |||| |     
T  10135878 aataagagtattcttaagaccatagtcccttttcggtttaatgtcccttcggaattaagaatggtcttaaaaacatagtcccttcgataa---atgtccc 10135782  T
Q  339 ttaggaataaaagagtacttttaagatcatagttcct-tcgagaacaataatgtctcatcgaaattaagaatgatcttaacgg--tatataaatattctt 435  Q
    ||   |||||| ||||||||||||||||||||| ||| |   ||| || |||||| | ||| ||||||||||||||||||| |  |||||||| | | ||    
T  10135781 ttcataataaa-gagtacttttaagatcatagtccctatttggaataacaatgtcccgtcggaattaagaatgatcttaacagtatatataaaaagtatt 10135683  T
Q  436 tcaatgtttttctatttgagaagaaat 462  Q
    ||||| |||||||||||||| ||||||    
T  10135682 tcaatatttttctatttgaggagaaat 10135656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 380 - 521
Target Start/End: Complemental strand, 11806763 - 11806622
Alignment:
Q  380 gaacaataatgtctcatcgaaattaagaatgatcttaacggtatataaatattctttcaatgtttttctatttgagaagaaattaaaaagtcaaaatggt 479  Q
    ||||||||||||| | ||  || ||||||| || ||| | ||||||||||||||||||||| |||||||| ||||  | ||||||||||||| || ||||    
T  11806763 gaacaataatgtcccgtcagaaataagaattattttagcagtatataaatattctttcaatatttttctacttgaagaaaaattaaaaagtcgaattggt 11806664  T
Q  480 ggcatcatcatatttgaatgattgtagtgtcatattgatatt 521  Q
    || ||||   ||||||| || | |||||| ||||||||||||    
T  11806663 ggtatcactgtatttgagtggtcgtagtgccatattgatatt 11806622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 240 - 426
Target Start/End: Complemental strand, 10140646 - 10140462
Alignment:
Q  240 aataagagtgttcttat-accttagtctctcttctgtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttca 338  Q
    ||||||||||||||||  ||| ||||| || ||| || |||||||||||| |||| |||||  ||||||||||||||||||||  |||||   |||| |     
T  10140646 aataagagtgttcttaagaccatagtcccttttcggtttaatgtcccttcggaattaagaatggtcttaaaaacatagtcccttcgataa---atgtccc 10140550  T
Q  339 ttaggaataaaagagtacttttaagatcatagttcct-tcgagaacaataatgtctcatcgaaattaagaatgatcttaacggtatata 426  Q
    ||   ||| |||||||||||||||||||||||| ||| |   ||| || |||||| | ||| ||||||||||||||||||| |||||||    
T  10140549 ttcataat-aaagagtacttttaagatcatagtccctatttggaataacaatgtcccgtcggaattaagaatgatcttaacagtatata 10140462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 242 - 462
Target Start/End: Original strand, 16649180 - 16649402
Alignment:
Q  242 taagagtgttcttat-accttagtctctcttctgtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcatt 340  Q
    ||||||||||||||  ||| ||||| || ||| || ||||||||||||  ||| |||||  ||||||||| ||||||||||  |||||| ||||| | ||    
T  16649180 taagagtgttcttaagaccatagtcccttttcggtttaatgtcccttcgaaattaagaatggtcttaaaa-catagtcccttcgataatatatgtccctt 16649278  T
Q  341 aggaataaaagagtacttttaagatcatagttcct-tcgagaacaataatgtctcatcgaaattaagaatgatcttaacgg--tatataaatattctttc 437  Q
      ||||||| ||||| ||||||||||||||| | | |   ||| || |||||| | ||||||||||||||||| |||||||  |||||||| | | ||||    
T  16649279 cagaataaa-gagtatttttaagatcatagtccttatttggaataacaatgtcccgtcgaaattaagaatgattttaacggtatatataaaaagtatttc 16649377  T
Q  438 aatgtttttctatttgagaagaaat 462  Q
    ||| |||||| ||||||| ||||||    
T  16649378 aatatttttccatttgaggagaaat 16649402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 32 - 110
Target Start/End: Original strand, 39199835 - 39199917
Alignment:
Q  32 ataaaatagaacacacatattatta----atgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatag 110  Q
    ||||||||||||||||| |||| ||     |||||||||||| ||||||| |||||||||||| |||||||||||||||||||    
T  39199835 ataaaatagaacacacacattaatagtgtgtgtttaaattgcagtatttacttttaaatacttaataatgataaaaataatag 39199917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 302 - 462
Target Start/End: Original strand, 39587973 - 39588132
Alignment:
Q  302 gtcttaaaaacatagtccctgtgataatgtatgttcattaggaataaaagagtacttttaagatcatagttcct-tcgagaacaataatgtctcatcgaa 400  Q
    |||||||||||| |||||||  |||||| ||||| |  | |||||||| || |||||||||||||||||| ||| |   |||  | |||||| | |||||    
T  39587973 gtcttaaaaacacagtcccttcgataatatatgtcccatcggaataaa-gaatacttttaagatcatagtccctatttggaatgacaatgtcccgtcgaa 39588071  T
Q  401 attaagaatgatcttaacggtatataaatattctttcaatgtttttctatttgagaagaaat 462  Q
    |||||||||| ||||||||||||||||||||| |||  || |||||||| ||||| ||||||    
T  39588072 attaagaatggtcttaacggtatataaatattattt-tatatttttctaattgaggagaaat 39588132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 57 - 151
Target Start/End: Original strand, 39586171 - 39586260
Alignment:
Q  57 atgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattatt-tttattcgtgaatatcacttccca 151  Q
    |||||||||| | | ||||||||||||||||| ||||||||||||||||||      || ||||||||||| ||||||| ||||||||||||||||    
T  39586171 atgtttaaatagtgatatttaattttaaatacctgataatgataaaaataa------taataattattattctttattcatgaatatcacttccca 39586260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 242 - 462
Target Start/End: Original strand, 26927265 - 26927487
Alignment:
Q  242 taagagtgttcttat-accttagtctctcttctgtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcatt 340  Q
    ||||||||||||||  ||| ||||| || ||| || |||| ||||||  |||| |||||  |||||| || ||||||||||  |||||| ||||| | ||    
T  26927265 taagagtgttcttaagaccatagtcccttttcggtttaatatccctttggaattaagaatggtcttacaa-catagtcccttcgataatatatgtccctt 26927363  T
Q  341 aggaataaaagagtacttttaagatcatagttcct-tcgagaacaataatgtctcatcgaaattaagaatgatcttaacgg--tatataaatattctttc 437  Q
      ||||||| ||||| ||||||||||||||| ||| |   ||| || |||||  | ||| |||||||||||||||||||||  |||||||| | | ||||    
T  26927364 cagaataaa-gagtatttttaagatcatagtccctatttggaataacaatgttccgtcggaattaagaatgatcttaacggtatatataaaaagtatttc 26927462  T
Q  438 aatgtttttctatttgagaagaaat 462  Q
    ||| |||||||||||||| ||||||    
T  26927463 aatatttttctatttgaggagaaat 26927487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 277 - 426
Target Start/End: Complemental strand, 25844266 - 25844120
Alignment:
Q  277 taatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcattaggaataaaagagtacttttaagatcatagttcct- 375  Q
    |||||||||||| |||| |||||  ||||||||||||||||||||  |||||   |||| | ||  | || |||||||||||||||||||||||| |||     
T  25844266 taatgtcccttcggaattaagaatggtcttaaaaacatagtcccttcgataa---atgtcccttcaggat-aaagagtacttttaagatcatagtcccta 25844171  T
Q  376 tcgagaacaataatgtctcatcgaaattaagaatgatcttaacggtatata 426  Q
    |   ||| |  |||||| | ||| |||||||||||||||||||||||||||    
T  25844170 tttggaatagcaatgtcccgtcggaattaagaatgatcttaacggtatata 25844120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 131 - 229
Target Start/End: Original strand, 39199918 - 39200010
Alignment:
Q  131 attcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttccttcattcaaat 229  Q
    |||| |||||||||||||||||| |||| ||||||||| |  |||||       |||||||||||| |||| |||||||||| ||||||||||||||||    
T  39199918 attcatgaatatcacttcccataaatttggcttatggtagctgtgatt------agaataagaatttaattaaatttcttatatttccttcattcaaat 39200010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 80 - 152
Target Start/End: Complemental strand, 46697315 - 46697248
Alignment:
Q  80 tttaaatacttgataatgataaaaataatagtagtagtaattatta-tttttattcgtgaatatcacttcccat 152  Q
    ||||||||||||| |||||||||||||||      ||||||||||| |||||| || |||||||||||||||||    
T  46697315 tttaaatacttgaaaatgataaaaataat------agtaattattattttttactcatgaatatcacttcccat 46697248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 229
Target Start/End: Complemental strand, 20108238 - 20108201
Alignment:
Q  192 gaattcaattgaatttcttatttttccttcattcaaat 229  Q
    ||||||||||||||||||||| |||||| |||||||||    
T  20108238 gaattcaattgaatttcttatctttcctccattcaaat 20108201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 105; Significance: 3e-52; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 20 - 234
Target Start/End: Complemental strand, 12104094 - 12103892
Alignment:
Q  20 tgggggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaa 119  Q
    ||||||||| | ||||||| ||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||          
T  12104094 tgggggtcccacataaaatggaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtag------ 12104001  T
Q  120 ttattatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttcct 219  Q
    |||||||||||||||| |||||||||||| |||| ||||||||||||||||  |||      ||||| ||||||||| |||| |||||||||| ||||||    
T  12104000 ttattatttttattcgagaatatcacttctcataaatttagcttatggtgggtgtg------ataagtataagaatttaattaaatttcttatatttcct 12103907  T
Q  220 tcattcaaatacaat 234  Q
    |||||||||| ||||    
T  12103906 tcattcaaatccaat 12103892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 20 - 185
Target Start/End: Original strand, 6154488 - 6154647
Alignment:
Q  20 tgggggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaa 119  Q
    ||||||||| | ||||||||||||||||| |||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||      ||||||    
T  6154488 tgggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataa------tagtaa 6154581  T
Q  120 ttattatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataa 185  Q
    |||||||||||||||| |||||||||||  |||| ||||||||||||||||| |||||| ||||||    
T  6154582 ttattatttttattcgagaatatcactttacataaatttagcttatggtggttgtgataagaataa 6154647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 32 - 234
Target Start/End: Original strand, 20180221 - 20180408
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattattttta 131  Q
    ||||||||||||||||| |||| || |||||||||| ||||||||||||||||||   ||||||||||||||||||||||      ||||||||||||||    
T  20180221 ataaaatagaacacacacattagtagtgtttaaattacggtatttaattttaaat---tgataatgataaaaataatagt------aattattattttta 20180311  T
Q  132 ttcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttccttcattcaaatac 231  Q
    |||| ||||||||||||| ||| ||||||||||||||||| |||      ||||||||||||||| ||||||||||||||| |||||||| ||||||| |    
T  20180312 ttcgagaatatcacttcctataaatttagcttatggtggttgtg------ataagaataagaatttaattgaatttcttatatttccttcgttcaaattc 20180405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 26668318 - 26668160
Alignment:
Q  20 tgggggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaa 119  Q
    ||||||||| | ||||||||||||||||| |||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||      |||||    
T  26668318 tgggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataat------agtaa 26668225  T
Q  120 ttattatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataa 185  Q
    |||||| ||||||||| ||||||||||| ||||| ||||||||||||||||| |||||| ||||||    
T  26668224 ttatta-ttttattcgagaatatcactttccataaatttagcttatggtggttgtgataagaataa 26668160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 26939915 - 26939757
Alignment:
Q  20 tgggggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaa 119  Q
    ||||||||| | ||||||||||||||||| |||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||      |||||    
T  26939915 tgggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataat------agtaa 26939822  T
Q  120 ttattatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataa 185  Q
    |||||| ||||||||| ||||||||||| ||||| ||||||||||||||||| |||||| ||||||    
T  26939821 ttatta-ttttattcgagaatatcactttccataaatttagcttatggtggttgtgataagaataa 26939757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 20 - 185
Target Start/End: Original strand, 37646111 - 37646271
Alignment:
Q  20 tgggggtcctaaataaaatagaacac--acatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagt 117  Q
    ||||||||| | ||||||||||||||  ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||      ||||    
T  37646111 tgggggtcccacataaaatagaacacacacatattattagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataa------tagt 37646204  T
Q  118 aattattatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataa 185  Q
    |||||||| ||||||||| ||||||||||| ||||| ||||||||||||||||| |||||| ||||||    
T  37646205 aattatta-ttttattcgagaatatcactttccataaatttagcttatggtggttgtgataagaataa 37646271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 32 - 185
Target Start/End: Original strand, 37247867 - 37248014
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattattttta 131  Q
    ||||||||||||||||| |||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||    
T  37247867 ataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataa------tagtaattattattttta 37247960  T
Q  132 ttcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataa 185  Q
    || | ||||||||||| ||||| |||||| |||||||||| |||||| ||||||    
T  37247961 tttgagaatatcactttccataaatttagtttatggtggttgtgataagaataa 37248014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 23 - 185
Target Start/End: Original strand, 29167032 - 29167187
Alignment:
Q  23 gggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaatta 122  Q
    |||||||| ||||||||||||||||| |||| || ||||||||||| ||||||||||||||||||||||||||||||||||| ||      |||||||||    
T  29167032 gggtcctacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaacaa------tagtaatta 29167125  T
Q  123 ttatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataa 185  Q
    ||| ||||||||| ||||||||||| ||||| ||||||||||||||||| | |||| ||||||    
T  29167126 tta-ttttattcgagaatatcactttccataaatttagcttatggtggttgagataagaataa 29167187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 22 - 185
Target Start/End: Original strand, 37536994 - 37537152
Alignment:
Q  22 ggggtcctaaataaaatagaacac--acatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaa 119  Q
    ||||||| | ||||||||||||||  |||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||      ||||||    
T  37536994 ggggtcccacataaaatagaacacacacatattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataa------tagtaa 37537087  T
Q  120 ttattatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataa 185  Q
    |||||| ||||||||| ||||||||||| ||||| ||||||||||||||||| |||||| ||||||    
T  37537088 ttatta-ttttattcgagaatatcactttccataaatttagcttatggtggttgtgataagaataa 37537152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 7452795 - 7452636
Alignment:
Q  20 tgggggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaa 119  Q
    ||||||||| | ||||||||||||||||| |||| || ||||||||||| ||||||||||||||||||||||||||||||||||||     || ||||||    
T  7452795 tgggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaat-----taatagtaa 7452701  T
Q  120 ttattatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataa 185  Q
    |||||| ||||||||| |||||| | || ||||| ||||||||||||||||| |||||| ||||||    
T  7452700 ttatta-ttttattcgagaatattattttccataaatttagcttatggtggttgtgataagaataa 7452636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 277 - 519
Target Start/End: Original strand, 6513496 - 6513734
Alignment:
Q  277 taatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcattaggaataaaagagtacttttaagatcatagttcctt 376  Q
    ||||||||||||  ||| |||||   |||||||||||||||||||  |||||| || || | || |||||||| |||| || ||||||||||||| ||||    
T  6513496 taatgtcccttcgaaattaagaatgatcttaaaaacatagtccctccgataatataagtcccttcggaataaa-gagtgctattaagatcatagtccctt 6513594  T
Q  377 cgagaacaataatgtctcatcgaaattaagaatgatcttaacggtatataaatattctttcaatgtttttctatttgagaagaaattaaaaagtcaaaat 476  Q
       ||| | ||||||| | ||  |||||||||||||||||| |||||||||||||||||||||| |||||||| ||||| ||||||||||||||  ||||    
T  6513595 ttggaata-taatgtcccgtcataattaagaatgatcttaaaggtatataaatattctttcaatatttttctaattgaggagaaattaaaaagtggaaat 6513693  T
Q  477 ggtggcatcatcatatttgaatgattgtagtgtcatattgata 519  Q
    ||||| |||  ||||||||| || | |||||| ||||||||||    
T  6513694 ggtggtatc--catatttgagtggtcgtagtgccatattgata 6513734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 386 - 521
Target Start/End: Original strand, 20180738 - 20180873
Alignment:
Q  386 taatgtctcatcgaaattaagaatgatcttaacggtatataaatattctttcaatgtttttctatttgagaagaaattaaaaagtcaaaatggtggcatc 485  Q
    ||||||| | || ||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||| |||||||||||||| |||||||||| |||    
T  20180738 taatgtcccttcaaaattaagaatgatcttaacggtatataaatattcattcaatatttttctaattgaggagaaattaaaaagtgaaaatggtggtatc 20180837  T
Q  486 atcatatttgaatgattgtagtgtcatattgatatt 521  Q
    | ||||||||| || | |||||  ||||||||||||    
T  20180838 accatatttgagtggtcgtagtaccatattgatatt 20180873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 32 - 185
Target Start/End: Complemental strand, 36424666 - 36424520
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattattttta 131  Q
    ||||||||||||||||| |||| || || |||||||| |||||||||||||||||||||| |||||||||||||||      || |||||||||  ||||    
T  36424666 ataaaatagaacacacacattagtagtgcttaaattgtggtatttaattttaaatacttggtaatgataaaaataa------tattaattatta-attta 36424574  T
Q  132 ttcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataa 185  Q
    |||| |||||||||||  |||| ||||||||||||||||| |||||| ||||||    
T  36424573 ttcgagaatatcactttacataaatttagcttatggtggttgtgataagaataa 36424520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 22 - 140
Target Start/End: Original strand, 10759419 - 10759531
Alignment:
Q  22 ggggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaatt 121  Q
    ||||||| | ||||||||||||| ||| |||| || |||||||||||| |||||||||||||||||||||||||||||||||||||      ||||||||    
T  10759419 ggggtcccacataaaatagaacagacacattagtagtgtttaaattgcagtatttaattttaaatacttgataatgataaaaataa------tagtaatt 10759512  T
Q  122 attatttttattcgtgaat 140  Q
    |||||||||||||| ||||    
T  10759513 attatttttattcgagaat 10759531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 20 - 190
Target Start/End: Complemental strand, 36430558 - 36430395
Alignment:
Q  20 tgggggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaa 119  Q
    ||||||||| | ||||||||||||||||| |||| || ||||||||||  |||||||||||||||||| ||| ||||||||||||||||      |||||    
T  36430558 tgggggtcccacataaaatagaacacacacattagtagtgtttaaattatggtatttaattttaaatatttggtaatgataaaaataat------agtaa 36430465  T
Q  120 ttattatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaata 190  Q
    ||||||  |||||||| |||||||||||  |||| |||||| ||||| |||| |||||| |||||| ||||    
T  36430464 ttatta-atttattcgagaatatcacttttcataaatttagtttatgttggttgtgataagaataataata 36430395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 242 - 462
Target Start/End: Complemental strand, 26667824 - 26667602
Alignment:
Q  242 taagagtgttcttat-accttagtctctcttctgtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcatt 340  Q
    ||||||||||||||  ||| ||||| || ||| || |||||||||||| |||| |||||  ||||||||| |||||||||| ||||||| ||||| | ||    
T  26667824 taagagtgttcttaagaccatagtcccttttcggtttaatgtcccttcggaattaagaatggtcttaaaa-catagtccctttgataatatatgtccctt 26667726  T
Q  341 aggaataaaagagtacttttaagatcatagttcct-tcgagaacaataatgtctcatcgaaattaagaatgatcttaacgg--tatataaatattctttc 437  Q
      ||||||| ||||||||||||||||||||| ||| |   ||| || |||||| | ||| |||||||||||||||||||||  |||||||| | | ||||    
T  26667725 cagaataaa-gagtacttttaagatcatagtccctatttggaataacaatgtcccgtcggaattaagaatgatcttaacggtatatataaaaagtatttc 26667627  T
Q  438 aatgtttttctatttgagaagaaat 462  Q
    ||| |||||||||||||| ||||||    
T  26667626 aatatttttctatttgaggagaaat 26667602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 242 - 462
Target Start/End: Complemental strand, 26939421 - 26939199
Alignment:
Q  242 taagagtgttcttat-accttagtctctcttctgtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcatt 340  Q
    ||||||||||||||  ||| ||||| || ||| || |||||||||||| |||| |||||  ||||||||| |||||||||| ||||||| ||||| | ||    
T  26939421 taagagtgttcttaagaccatagtcccttttcggtttaatgtcccttcggaattaagaatggtcttaaaa-catagtccctttgataatatatgtccctt 26939323  T
Q  341 aggaataaaagagtacttttaagatcatagttcct-tcgagaacaataatgtctcatcgaaattaagaatgatcttaacgg--tatataaatattctttc 437  Q
      ||||||| ||||||||||||||||||||| ||| |   ||| || |||||| | ||| |||||||||||||||||||||  |||||||| | | ||||    
T  26939322 cagaataaa-gagtacttttaagatcatagtccctatttggaataacaatgtcccgtcggaattaagaatgatcttaacggtatatataaaaagtatttc 26939224  T
Q  438 aatgtttttctatttgagaagaaat 462  Q
    ||| |||||||||||||| ||||||    
T  26939223 aatatttttctatttgaggagaaat 26939199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 61 - 185
Target Start/End: Complemental strand, 39519394 - 39519277
Alignment:
Q  61 ttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattatttttattcgtgaatatcacttcccatacatttag 160  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||      ||||||||||| ||||||||| ||||||||||| ||||| ||||||    
T  39519394 ttaaattgtggtatttaattttaaatacttgatagtgataaaaataat------agtaattatta-ttttattcgagaatatcactttccataaatttag 39519302  T
Q  161 cttatggtggtagtgataggaataa 185  Q
    |||||||| || |||||| ||||||    
T  39519301 cttatggtagttgtgataagaataa 39519277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 61 - 185
Target Start/End: Complemental strand, 39524033 - 39523916
Alignment:
Q  61 ttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattatttttattcgtgaatatcacttcccatacatttag 160  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||      ||||||||||| ||||||||| ||||||||||| ||||| ||||||    
T  39524033 ttaaattgtggtatttaattttaaatacttgatagtgataaaaataat------agtaattatta-ttttattcgagaatatcactttccataaatttag 39523941  T
Q  161 cttatggtggtagtgataggaataa 185  Q
    |||||||| || |||||| ||||||    
T  39523940 cttatggtagttgtgataagaataa 39523916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 242 - 462
Target Start/End: Original strand, 9726299 - 9726520
Alignment:
Q  242 taagagtgttcttat-accttagtctctcttctgtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcatt 340  Q
    ||||||||||||||  ||| ||||| || ||| || |||||||||||| |||| |||||  ||||||||| ||||||||||  |||||| ||||| | ||    
T  9726299 taagagtgttcttaagaccgtagtcccttttcggtttaatgtcccttcagaattaagaatggtcttaaaa-catagtcccttcgataatatatgtccctt 9726397  T
Q  341 aggaataaaagagtacttttaagatcatagttcct-tcgagaacaataatgtctcatcgaaattaagaatgatcttaacggtatat-aaatattctttca 438  Q
     |||||||| ||||||||||||||||||||| ||| |   ||| || |||||| | ||| |||||||||||||||||| ||||||| ||| ||| |||||    
T  9726398 cggaataaa-gagtacttttaagatcatagtccctatttggaataacaatgtcccgtcggaattaagaatgatcttaaaggtatataaaaaattatttca 9726496  T
Q  439 atgtttttctatttgagaagaaat 462  Q
    || ||||| |||||||| ||||||    
T  9726497 atatttttttatttgaggagaaat 9726520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 23 - 106
Target Start/End: Complemental strand, 40148880 - 40148797
Alignment:
Q  23 gggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaata 106  Q
    |||||| | ||||||||||||| ||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  40148880 gggtcccacataaaatagaacaaacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaata 40148797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 75 - 234
Target Start/End: Original strand, 6511740 - 6511890
Alignment:
Q  75 ttaattttaaatacttgataatgataaaaataatagtagtagtaattattatttttattcgtgaatatcacttcccatacattta---gcttatggtggt 171  Q
    |||||||||||||||||||||||||||||||||||||      |||||||||||||||| | ||||||||||||| ||| |||||   ||||||||||||    
T  6511740 ttaattttaaatacttgataatgataaaaataatagt------aattattatttttatttgagaatatcacttcctataaatttagctgcttatggtggt 6511833  T
Q  172 agtgataggaataagaataagaattcaattgaatttcttatttttccttcattcaaatacaat 234  Q
     |||      ||||||||||||||| |||| ||||| |||| |||| ||||||||||| ||||    
T  6511834 tgtg------ataagaataagaatttaattaaattttttatatttcattcattcaaatccaat 6511890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 400 - 519
Target Start/End: Original strand, 16115937 - 16116056
Alignment:
Q  400 aattaagaatgatcttaacggtatataaatattctttcaatgtttttctatttgagaagaaattaaaaagtcaaaatggtggcatcatcatatttgaatg 499  Q
    ||||||||||||||||||| |||||| ||||||||||  || |||||||||||    |||| ||||||||| | |||||||| |||||||||||||| ||    
T  16115937 aattaagaatgatcttaacagtatattaatattcttttgatatttttctatttttttagaagttaaaaagttagaatggtggtatcatcatatttgagtg 16116036  T
Q  500 attgtagtgtcatattgata 519  Q
     |||||||  ||||||||||    
T  16116037 gttgtagtaccatattgata 16116056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 240 - 462
Target Start/End: Original strand, 37549694 - 37549918
Alignment:
Q  240 aataagagtgttcttat-accttagtctctcttctgtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttca 338  Q
    ||||||||||||||||  ||| ||||| || ||| || |||||||||||| |||| |||||  ||||| ||| |||||||| |  |||||| ||||| |     
T  37549694 aataagagtgttcttaagaccatagtcccttttcggtttaatgtcccttcggaattaagaatggtcttgaaa-catagtccattcgataatatatgtccc 37549792  T
Q  339 ttaggaataaaagagtacttttaagatcatagttcct-tcgagaacaataatgtctcatcgaaattaagaatgatcttaacgg--tatataaatattctt 435  Q
    ||  ||||||| ||||||||||||||||||||| ||| |   ||| || |||||| | ||| |||||||||||||||||||||  |||||||| | | ||    
T  37549793 ttcagaataaa-gagtacttttaagatcatagtccctatttggaataacaatgtcccgtcggaattaagaatgatcttaacggtatatataaaaagtatt 37549891  T
Q  436 tcaatgtttttctatttgagaagaaat 462  Q
    ||||| |||||||||||||| ||||||    
T  37549892 tcaatatttttctatttgaggagaaat 37549918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 240 - 389
Target Start/End: Original strand, 23757356 - 23757505
Alignment:
Q  240 aataagagtgttcttat-accttagtctctcttctgtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttca 338  Q
    ||||||||| ||||||  ||||||||| |  ||| |||||||||| |||| |||| | |||| ||||||||||||||||||||  |||||||||||| |     
T  23757356 aataagagttttcttaagaccttagtcccaattcggtataatgtcacttcggaattatgaaaggtcttaaaaacatagtcccttcgataatgtatgtccc 23757455  T
Q  339 ttaggaataaaagagtacttttaagatcatagttccttcgagaacaataat 389  Q
    || ||||| ||| |||||||||||||||||||| ||||   ||||||||||    
T  23757456 ttgggaat-aaatagtacttttaagatcatagtcccttttggaacaataat 23757505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 240 - 389
Target Start/End: Original strand, 23822812 - 23822961
Alignment:
Q  240 aataagagtgttcttat-accttagtctctcttctgtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttca 338  Q
    ||||||||| ||||||  ||||||||| |  ||| |||||||||| |||| |||| | |||| ||||||||||||||||||||  |||||||||||| |     
T  23822812 aataagagttttcttaagaccttagtcccaattcggtataatgtcacttcggaattatgaaaggtcttaaaaacatagtcccttcgataatgtatgtccc 23822911  T
Q  339 ttaggaataaaagagtacttttaagatcatagttccttcgagaacaataat 389  Q
    || ||||| ||| |||||||||||||||||||| ||||   ||||||||||    
T  23822912 ttgggaat-aaatagtacttttaagatcatagtcccttttggaacaataat 23822961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 32 - 112
Target Start/End: Complemental strand, 17162885 - 17162804
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaa-ttttaaatacttgataatgataaaaataatagta 112  Q
    ||||||||||||||||| |||| |  ||||||||||| ||||||||| |||||||||| |||||||||||||||||||||||    
T  17162885 ataaaatagaacacacacattagtggtgtttaaattgaggtatttaatttttaaatacctgataatgataaaaataatagta 17162804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 277 - 462
Target Start/End: Original strand, 37248383 - 37248569
Alignment:
Q  277 taatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcattaggaataaaagagtacttttaagatcatagttcct- 375  Q
    |||||||||||| |||| |||||   |||||||||||||||||||  |||||| ||||| | ||  |||| |||||||||||||||||||||||| |||     
T  37248383 taatgtcccttcagaattaagaatgatcttaaaaacatagtcccttcgataatatatgtcccttcagaat-aaagagtacttttaagatcatagtcccta 37248481  T
Q  376 tcgagaacaataatgtctcatcgaaattaagaatgatcttaacgg--tatataaatattctttcaatgtttttctatttgagaagaaat 462  Q
    |   ||| || |||||| | ||| ||||||||||||||||||| |  |||||||| | | ||||||| ||||| |||||||||||||||    
T  37248482 tttggaagaacaatgtcccgtcggaattaagaatgatcttaacagtatatataaaaagtatttcaatattttt-tatttgagaagaaat 37248569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 242 - 462
Target Start/End: Complemental strand, 40148447 - 40148225
Alignment:
Q  242 taagagtgttcttat-accttagtctctcttctgtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcatt 340  Q
    ||||||||||||||  ||| ||||| || ||| || |||||||||||| |||| |||||  ||||| ||||||||||||||  |||||| ||||| | ||    
T  40148447 taagagtgttcttaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatggtctt-aaaacatagtcccttcgataatatatgtccctt 40148349  T
Q  341 aggaataaaagagtacttttaagatcatagttcct-tcgagaacaataatgtctcatcgaaattaagaatgatcttaacggtata--taaatattctttc 437  Q
      |||||||| ||||||||||||||||| || ||| |   ||| || |||||||| ||| |||| |||||||| |||||||||||  |||| | | ||||    
T  40148348 cagaataaaa-agtacttttaagatcattgtccctatttggaataacaatgtctcgtcggaattgagaatgatgttaacggtatatgtaaaaaatatttc 40148250  T
Q  438 aatgtttttctatttgagaagaaat 462  Q
    ||| |||||||||||||| ||||||    
T  40148249 aatatttttctatttgaggagaaat 40148225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 32 - 178
Target Start/End: Original strand, 16115297 - 16115436
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattattttta 131  Q
    |||||||  |||||||| |||| ||||||||||||| |||| |||||||||||||||||| ||||||| |||       ||  ||| ||| |||||| ||    
T  16115297 ataaaatgaaacacacacattagtaatgtttaaattacggtgtttaattttaaatacttgctaatgatgaaa-------taaaagtcattgttatttata 16115389  T
Q  132 ttcgtgaatatcacttcccatacatttagcttatggtggtagtgata 178  Q
    |||||| ||||||||||||||| |||||||||| | |||| ||||||    
T  16115390 ttcgtggatatcacttcccataaatttagcttacgttggttgtgata 16115436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 277 - 462
Target Start/End: Complemental strand, 7452268 - 7452084
Alignment:
Q  277 taatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcattaggaataaaagagtacttttaagatcatagttcct- 375  Q
    |||||||||||| |||| |||||  ||||||||||||||||||||  |||||   |||| | ||  ||||||| ||||||||||||||||||||| |||     
T  7452268 taatgtcccttcggaattaagaatggtcttaaaaacatagtcccttcgataa---atgtcccttcagaataaa-gagtacttttaagatcatagtcccta 7452173  T
Q  376 tcgagaacaataatgtctcatcgaaattaagaatgatcttaacgg--tatataaatattctttcaatgtttttctatttgagaagaaat 462  Q
    |   ||| || |||||| | || |||||||||||||||||||| |  |||||||| | | ||||||| |||||||||||||| ||||||    
T  7452172 tttggaataacaatgtcccgtcaaaattaagaatgatcttaacagtatatataaaaagtatttcaatatttttctatttgaggagaaat 7452084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 242 - 426
Target Start/End: Original strand, 29167517 - 29167701
Alignment:
Q  242 taagagtgttcttat-accttagtctctcttctgtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcatt 340  Q
    ||||||||||||||  ||| ||||| || ||| || |||||||||||| |||| |||||  ||||||||| ||| ||||||  |||||| ||||| | ||    
T  29167517 taagagtgttcttaagaccatagtcccttttcggtttaatgtcccttcggaattaagaatggtcttaaaa-cattgtcccttcgataatatatgtccctt 29167615  T
Q  341 aggaataaaagagtacttttaagatcatagttcct-tcgagaacaataatgtctcatcgaaattaagaatgatcttaacggtatata 426  Q
      ||||||| ||||||||||||||||||||| ||| |   ||| || |||||| | ||| |||||||||||||||||||||||||||    
T  29167616 cagaataaa-gagtacttttaagatcatagtccctatttggaagaacaatgtcccgtcggaattaagaatgatcttaacggtatata 29167701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 32 - 112
Target Start/End: Complemental strand, 17159405 - 17159324
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaatttt-aaatacttgataatgataaaaataatagta 112  Q
    ||||||||||| ||||| |||| || ||||| ||||| ||||||||||||| |||||| |||||||||||||||||||||||    
T  17159405 ataaaatagaagacacacattagtagtgttttaattgaggtatttaatttttaaatacctgataatgataaaaataatagta 17159324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 32 - 112
Target Start/End: Complemental strand, 23689099 - 23689019
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagta 112  Q
    ||||||||||||||||| |||  || |||| |||||| ||||||||||||||||||| | |||||| ||||||||||||||    
T  23689099 ataaaatagaacacacacattcgtagtgttaaaattgtggtatttaattttaaataccttataatggtaaaaataatagta 23689019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 240 - 462
Target Start/End: Original strand, 37652492 - 37652716
Alignment:
Q  240 aataagagtgttcttat-accttagtctctcttctgtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttca 338  Q
    ||||||||||||||||  ||| ||||| || ||| || |||||||||||| |||| |||||  ||||| ||| |||||||| |  |||||| ||||| |     
T  37652492 aataagagtgttcttaagaccatagtcccttttcggtttaatgtcccttcggaattaagaatggtcttgaaa-catagtccattcgataatatatgtccc 37652590  T
Q  339 ttaggaataaaagagtacttttaagatcatagttcct-tcgagaacaataatgtctcatcgaaattaagaatgatcttaacgg--tatataaatattctt 435  Q
    ||  ||||||| ||| ||||||||||||||||| ||| |   ||| || |||||| | ||| |||||| ||||||||||||||  |||||||| | | ||    
T  37652591 ttcagaataaa-gagcacttttaagatcatagtccctatttggaataacaatgtcccgtcggaattaataatgatcttaacggtatatataaaaagtatt 37652689  T
Q  436 tcaatgtttttctatttgagaagaaat 462  Q
    ||||| |||||||||||||| ||||||    
T  37652690 tcaatatttttctatttgaggagaaat 37652716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 32 - 109
Target Start/End: Original strand, 35678966 - 35679043
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataata 109  Q
    ||||||||||||||||| |||| || ||||||||| | ||||||| ||||||||||| ||||||||||  ||||||||    
T  35678966 ataaaatagaacacacacattagtagtgtttaaatagtggtattttattttaaatacctgataatgatgcaaataata 35679043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 32 - 112
Target Start/End: Original strand, 40567670 - 40567750
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagta 112  Q
    |||||||| ||||||||  ||| || || |||||||| ||||||||||||||||||  | |||||||||||||||||||||    
T  40567670 ataaaataaaacacacacgttagtagtgattaaattgtggtatttaattttaaatatcttataatgataaaaataatagta 40567750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 348 - 429
Target Start/End: Original strand, 15414518 - 15414600
Alignment:
Q  348 aaagagtacttttaagatcatagttccttcgag-aacaataatgtctcatcgaaattaagaatgatcttaacggtatataaat 429  Q
    ||||||||||| |||||||||||||||||   | || ||||||||||| ||| ||| ||||||||||||||| ||||||||||    
T  15414518 aaagagtacttgtaagatcatagttcctttttggaataataatgtctcgtcggaatcaagaatgatcttaacagtatataaat 15414600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 384 - 462
Target Start/End: Original strand, 35679561 - 35679641
Alignment:
Q  384 aataatgtctcatcgaaattaagaatgatcttaacgg--tatataaatattctttcaatgtttttctatttgagaagaaat 462  Q
    ||||||||| | ||| |||||||||||||||||||||  |||||||| | | ||||||| |||||||||||||| ||||||    
T  35679561 aataatgtcgcgtcggaattaagaatgatcttaacggtatatataaaaagtatttcaatatttttctatttgaggagaaat 35679641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 462
Target Start/End: Complemental strand, 36429225 - 36429039
Alignment:
Q  277 taatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcattaggaataaaagagtacttttaagatcatagttcct- 375  Q
    |||||||||||| |||| |||||  ||||||||| ||||||| |   |||||| ||||| | ||  ||||||| ||||| ||||||||||||||| |||     
T  36429225 taatgtcccttcggaattaagaatggtcttaaaa-catagtctcgtcgataatatatgtcccttcagaataaa-gagtatttttaagatcatagtaccta 36429128  T
Q  376 tcgagaacaataatgtctcatcgaaattaagaatgatcttaacggta--tataaatattctttcaatgtttttctatttgagaagaaat 462  Q
    |   ||| || |||||| | ||| |||||||||||||||||||||||  |||||| | | ||| ||| |||||||||||||| ||||||    
T  36429127 tttggaataacaatgtcccgtcggaattaagaatgatcttaacggtatatataaaaagtattttaatatttttctatttgaggagaaat 36429039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 32 - 87
Target Start/End: Original strand, 6511671 - 6511726
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaata 87  Q
    |||||||||||| |||| |||| || |||||||||||| |||||||||||||||||    
T  6511671 ataaaatagaactcacacattagtagtgtttaaattgcagtatttaattttaaata 6511726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 15149701 - 15149613
Alignment:
Q  23 gggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaa-atacttgataatgataaaaataatagta 112  Q
    |||||||| ||||||||||||||||||  || || ||||||||||  | ||||||||||| | |||  |||||||||||||||||||||||    
T  15149701 gggtcctatataaaatagaacacacat--taatagtgtttaaattaagatatttaatttttagatatctgataatgataaaaataatagta 15149613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 182 - 237
Target Start/End: Original strand, 15413898 - 15413953
Alignment:
Q  182 ataagaataagaattcaattgaatttcttatttttccttcattcaaatacaatgag 237  Q
    |||||||||||||||||| |||||||| ||| ||||||||||| | ||||||||||    
T  15413898 ataagaataagaattcaagtgaatttcctatctttccttcatttatatacaatgag 15413953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 400 - 462
Target Start/End: Complemental strand, 12103419 - 12103355
Alignment:
Q  400 aattaagaatgatcttaacggta--tataaatattctttcaatgtttttctatttgagaagaaat 462  Q
    |||||||||||||||||||||||  |||||| | | ||||||| |||||||||||||| ||||||    
T  12103419 aattaagaatgatcttaacggtatatataaaaagtatttcaatatttttctatttgaggagaaat 12103355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 242 - 328
Target Start/End: Complemental strand, 557222 - 557135
Alignment:
Q  242 taagagtgttcttat-accttagtctctcttctgtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataa 328  Q
    ||||||||||||||  ||| ||||| || ||| || |||||||||||| |||| |||||  ||||||| |||||||||||| ||||||    
T  557222 taagagtgttcttaagaccatagtcccttttcggtttaatgtcccttcggaattaagaatggtcttaagaacatagtccctttgataa 557135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 242 - 328
Target Start/End: Complemental strand, 561994 - 561907
Alignment:
Q  242 taagagtgttcttat-accttagtctctcttctgtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataa 328  Q
    ||||||||||||||  ||| ||||| || ||| || |||||||||||| |||| |||||  ||||||| |||||||||||| ||||||    
T  561994 taagagtgttcttaagaccatagtcccttttcggtttaatgtcccttcggaattaagaatggtcttaagaacatagtccctttgataa 561907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 4872910 - 4872854
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatac 88  Q
    ||||||||||||||||| | || || ||||||||| | | |||||||||||||||||    
T  4872910 ataaaatagaacacacacaatagtagtgtttaaatagtgatatttaattttaaatac 4872854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 102; Significance: 2e-50; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 240 - 480
Target Start/End: Complemental strand, 26779669 - 26779429
Alignment:
Q  240 aataagagtgttcttat-accttagtctctcttctgtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttca 338  Q
    ||||||||||||||||  ||||||||| || |||  |||||||||||||| |||| |||||| || |||||||||||||| ||  || ||||||||| |     
T  26779669 aataagagtgttcttaagaccttagtccctattcactataatgtcccttcggaattaagaaatgttttaaaaacatagtctcttcgacaatgtatgtccc 26779570  T
Q  339 ttaggaataaaagagtacttttaagatcatagttccttcgagaacaataatgtctcatcgaaattaagaatgatcttaacggtatataaatattctttca 438  Q
    || | ||||||| |||||||||||||||||||| ||||   ||| ||||||||||| ||| ||||||||||||||||||  || ||||||||||||||||    
T  26779569 ttcgaaataaaa-agtacttttaagatcatagtcccttttggaaaaataatgtctcgtcggaattaagaatgatcttaaaagtttataaatattctttca 26779471  T
Q  439 atgtttttctatttgagaagaaattaaaaagtcaaaatggtg 480  Q
    || |||||||||||||| | |||||||||| |||||||||||    
T  26779470 atatttttctatttgaggaaaaattaaaaaatcaaaatggtg 26779429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 32 - 234
Target Start/End: Original strand, 38181350 - 38181540
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattattttta 131  Q
    ||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||    
T  38181350 ataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaataa------tagtaattattattttta 38181443  T
Q  132 ttcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttccttcattcaaatac 231  Q
    |||| ||||| ||||||||||| ||||| |||| |||||| |||      ||||||||||||||| |||| |||||||||| ||||||| |||||||| |    
T  38181444 ttcgagaataccacttcccataaatttaacttagggtggttgtg------ataagaataagaatttaattaaatttcttatatttcctttattcaaattc 38181537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 32 - 234
Target Start/End: Original strand, 15950640 - 15950833
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattattttta 131  Q
    ||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||    |||| | || ||||||||||||||||||    
T  15950640 ataaaatagaacacacacattaatagtgtttaaattgcggtatttaattttaaatacttgataatgat---gataaaaataatagtaattattattttta 15950736  T
Q  132 ttcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttccttcattcaaatac 231  Q
    |||| ||||||||||||||||| ||||||||||| || || |||      ||||||||||||||| ||||||||||||||| ||||||| |||| ||| |    
T  15950737 ttcgagaatatcacttcccatatatttagcttatagtagttgtg------ataagaataagaatttaattgaatttcttatatttccttgattccaatcc 15950830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 60 - 228
Target Start/End: Original strand, 23547700 - 23547861
Alignment:
Q  60 tttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattatttttattcgtgaatatcacttcccatacattta 159  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||      |||||| ||||||||| ||||||||| |||  ||| |||||    
T  23547700 tttaaattgcggtatttaattttaaatacttgataatgataaaaataatagta------attattgtttttattcatgaatatcatttct-ataaattta 23547792  T
Q  160 gcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttccttcattcaaa 228  Q
    | |||||||||| |||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  23547793 gtttatggtggttgtgataagaataagaataagaattcaatggaatttcttatctttccttcattcaaa 23547861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 32 - 219
Target Start/End: Complemental strand, 26780132 - 26779957
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattattttta 131  Q
    ||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||      ||||||||||||||||||    
T  26780132 ataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaacaa------tagtaattattattttta 26780039  T
Q  132 ttcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttcct 219  Q
    |||||||||||| |||| |||| ||||| |||||| |||| |||      ||||||||||||||||||||||||||||||| ||||||    
T  26780038 ttcgtgaatatctcttctcataaatttaacttatgatggttgtg------ataagaataagaattcaattgaatttcttatctttcct 26779957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 240 - 521
Target Start/End: Original strand, 23548159 - 23548440
Alignment:
Q  240 aataagagtgttcttat-accttagtctctcttctgtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttca 338  Q
    ||||||||||||||||  ||||| |||  | ||| |||||||||| |||  || | ||||||  ||||||||||||||| | |  ||||||||||||       
T  23548159 aataagagtgttcttaagacctttgtcgttattcggtataatgtctctttggagttaagaaagatcttaaaaacatagtacattcgataatgtatgtcgc 23548258  T
Q  339 ttaggaataaaagagtacttttaagatcatagttccttcgagaacaataatgtctcatcgaaattaagaatgatcttaacggtatataaatattctttca 438  Q
    || | ||| ||||| |||||||||||| ||||| ||||   ||||||||||||||  ||| ||||||||||||||||||| || ||||||||||||||||    
T  23548259 ttcgtaat-aaagaatacttttaagattatagtcccttttggaacaataatgtcttgtcggaattaagaatgatcttaacagtttataaatattctttca 23548357  T
Q  439 atgtttttctatttgagaagaaattaaaaagtcaaaatggtggcatcatcatatttgaatgattgtagtgtcatattgatatt 521  Q
    ||  ||||||||||||| ||||||||||||||| ||||||||| |||||||||||||| || |  |||||  |||||||||||    
T  23548358 atagttttctatttgaggagaaattaaaaagtcgaaatggtggtatcatcatatttgagtggtcatagtgcgatattgatatt 23548440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 32 - 189
Target Start/End: Original strand, 44924989 - 44925140
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattattttta 131  Q
    ||||||||||| ||||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||    
T  44924989 ataaaatagaaaacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaataa------cagtaattattattttta 44925082  T
Q  132 ttcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaat 189  Q
    |||| |||||||| |||||||| ||||| ||||||||||| |||||| ||||||||||    
T  44925083 ttcgagaatatcatttcccataaatttatcttatggtggttgtgataagaataagaat 44925140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 22 - 226
Target Start/End: Original strand, 18875443 - 18875635
Alignment:
Q  22 ggggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaatt 121  Q
    ||||||| | ||| |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||      ||||||||    
T  18875443 ggggtcccacatacaatagaacacacatattagtagtgtttaaattgcggtatttaattttaaatacttgataatgatacaaataa------tagtaatt 18875536  T
Q  122 attatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttccttc 221  Q
    ||| |||||||||| |||||||| || ||||| ||||| |||||| |||| |||      ||| ||||||||||| |||| |||||||||| ||||||||    
T  18875537 attgtttttattcgagaatatcattttccataaatttaacttatgatggttgtg------atatgaataagaattaaattaaatttcttatatttccttc 18875630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 22 - 229
Target Start/End: Complemental strand, 1808489 - 1808294
Alignment:
Q  22 ggggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaatt 121  Q
    ||||||| | ||||||||||||||||| ||||  | |||||||||||||||||||||||||||||| ||||||||||||||||||||      |||||||    
T  1808489 ggggtcccatataaaatagaacacacacattagaagtgtttaaattgcggtatttaattttaaatatttgataatgataaaaataat------agtaatt 1808396  T
Q  122 attatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttccttc 221  Q
    |||||||||||| |  ||||||| || | ||| ||||||||||||||||| |||      ||||||||||||||| |||| ||||| |||| ||||||||    
T  1808395 attatttttatttgaaaatatcattttctataaatttagcttatggtggttgtg------ataagaataagaatttaattaaattttttatatttccttc 1808302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 23 - 239
Target Start/End: Complemental strand, 2966622 - 2966417
Alignment:
Q  23 gggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaatta 122  Q
    |||||| | ||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||| |||||||||||||| |      |||||||||    
T  2966622 gggtcccatataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttaataatgataaaaatta------tagtaatta 2966529  T
Q  123 ttatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaa-tttcttatttttccttc 221  Q
    ||||||||||||||||||||||||||| ||| ||||| ||||  |||||  |      ||||||||||||||||||| | || ||| |||| ||||||||    
T  2966528 ttatttttattcgtgaatatcacttcctataaatttaccttacagtggttct------aataagaataagaattcaactaaatttttttatctttccttc 2966435  T
Q  222 attcaaatacaatgagtt 239  Q
    ||||| || |||||||||    
T  2966434 attcatatccaatgagtt 2966417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 32 - 185
Target Start/End: Complemental strand, 33417558 - 33417412
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattattttta 131  Q
    ||||||||||||||||| |||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||      ||||||||||| |||||    
T  33417558 ataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataat------agtaattatta-tttta 33417466  T
Q  132 ttcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataa 185  Q
    |||| ||||||||||| | ||| ||||||||||||| ||| |||||| ||||||    
T  33417465 ttcgagaatatcactttctataaatttagcttatggcggttgtgataagaataa 33417412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 277 - 463
Target Start/End: Original strand, 18875970 - 18876155
Alignment:
Q  277 taatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcattaggaataaaagagtacttttaagatcatagttcctt 376  Q
    ||||||||||||  ||| |||||  ||||||||||||||||| ||  |||||| || || | || |||||||| ||||| | ||||||||||||| ||||    
T  18875970 taatgtcccttcgaaattaagaatggtcttaaaaacatagtcactccgataatataagtcccttcggaataaa-gagtaatattaagatcatagtccctt 18876068  T
Q  377 cgagaacaataatgtctcatcgaaattaagaatgatcttaacggtatataaatattctttcaatgtttttctatttgagaagaaatt 463  Q
       ||| ||||||||| | ||| |||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||    
T  18876069 ttggaataataatgtcccgtcggaattaagaatgatcttaacgctatataaatattctttcaatttttttctatttgagcagaaatt 18876155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 32 - 185
Target Start/End: Original strand, 40124962 - 40125108
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattattttta 131  Q
    ||||||||||||||||| |||| || ||||||||||| ||||||||||||||||||||||||| ||||||||||||      |||||||||||| |||||    
T  40124962 ataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgatagtgataaaaataa------tagtaattatta-tttta 40125054  T
Q  132 ttcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataa 185  Q
    || | ||||||||||| ||||| |||||||||||||| || |||||| ||||||    
T  40125055 tttgagaatatcactttccataaatttagcttatggttgttgtgataagaataa 40125108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 35 - 234
Target Start/End: Original strand, 1910018 - 1910206
Alignment:
Q  35 aaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattatttttattc 134  Q
    ||||||| | |||| |||| || ||||||||  | |||||||||||||||||||||||||||||||||||      || ||||||||  |||||||||||    
T  1910018 aaatagagctcacacattagtagtgtttaaacagtggtatttaattttaaatacttgataatgataaaaaa-----taatagtaattgctatttttattc 1910112  T
Q  135 gtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttccttcattcaaatacaat 234  Q
    | |||||||||||| |||| |||||  |||||||||| ||||||      |||||||||||| ||||||||||||||| |||||||||||||||| ||||    
T  1910113 gagaatatcacttctcataaatttaatttatggtggttgtgata------agaataagaatttaattgaatttcttatatttccttcattcaaatccaat 1910206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 384 - 521
Target Start/End: Original strand, 28559340 - 28559476
Alignment:
Q  384 aataatgtctcatcgaaattaagaatgatcttaacggtatataaatattctttcaatgtttttctatttgagaagaaattaaaaagtcaaaatggtggca 483  Q
    ||||||||| | ||||||||||||||||||||||  ||||||||| ||||||||||| |||||||| ||||| ||||||| ||||||  ||||||||| |    
T  28559340 aataatgtcccgtcgaaattaagaatgatcttaaatgtatataaacattctttcaatatttttctaattgaggagaaatt-aaaagtggaaatggtggta 28559438  T
Q  484 tcatcatatttgaatgattgtagtgtcatattgatatt 521  Q
    ||| ||||||||| || | |||||||||||||||||||    
T  28559439 tcaccatatttgagtggtcgtagtgtcatattgatatt 28559476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 32 - 112
Target Start/End: Original strand, 28559184 - 28559264
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagta 112  Q
    ||||||||||||||||| |||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  28559184 ataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatatttgataatgataaaaataatagta 28559264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 242 - 519
Target Start/End: Original strand, 1910501 - 1910777
Alignment:
Q  242 taagagtgttcttat-accttagtctctcttctgtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcatt 340  Q
    ||||||||||||||  ||| ||||| || ||| || ||||||||||||  ||| |||||  |||||||||||||||||| |  |||||| || || | ||    
T  1910501 taagagtgttcttaagaccatagtcccttttcggtttaatgtcccttcataattaagaatggtcttaaaaacatagtccattcgataatataagtccctt 1910600  T
Q  341 aggaataaaagagtacttttaagatcatagttccttcga-gaacaataatgtctcatcgaaattaagaatgatcttaacggtatataaatattctttcaa 439  Q
     | |||||| ||||||| ||||||||||||| ||||    ||| ||||||||| | ||| |||||||||||| |||||||||||||||||||||||||||    
T  1910601 cgaaataaa-gagtactattaagatcatagtcccttttttgaataataatgtcccgtcggaattaagaatgaccttaacggtatataaatattctttcaa 1910699  T
Q  440 tgtttttctatttgagaagaaattaaaaagtcaaaatggtgg-catcatcatatttgaatgattgtagtgtcatattgata 519  Q
    | |||   || | ||| ||||||| ||||||  |||||||||  || | ||||||||| || | |||||||||||||||||    
T  1910700 tattt---taatcgaggagaaatttaaaagtggaaatggtggtaataaccatatttgagtggtcgtagtgtcatattgata 1910777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 381 - 496
Target Start/End: Complemental strand, 2966059 - 2965940
Alignment:
Q  381 aacaataatgtctcatcgaaattaagaatgatcttaacggtatataaatattctttcaa----tgtttttctatttgagaagaaattaaaaagtcaaaat 476  Q
    |||||||||||| | ||||||||||||||||| ||||| ||||||||||||||||||||    | |||||||| ||||| ||||||||||||||| ||||    
T  2966059 aacaataatgtcccgtcgaaattaagaatgattttaacagtatataaatattctttcaatatttatttttctacttgaggagaaattaaaaagtcgaaat 2965960  T
Q  477 ggtggcatcatcatatttga 496  Q
    ||||| |||| |||||||||    
T  2965959 ggtggtatcaccatatttga 2965940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 352 - 521
Target Start/End: Original strand, 28564461 - 28564631
Alignment:
Q  352 agtacttttaagatcatagttccttcgag-aacaataatgtctcatcgaaattaagaatgatcttaacggtatataaatattctttcaatgtttttctat 450  Q
    |||||| ||||||||||||||||||   | || ||||||||| | ||||||||||||||||||||||  ||||||||| ||||||||||    ||||||     
T  28564461 agtactattaagatcatagttcctttttggaataataatgtcccgtcgaaattaagaatgatcttaaatgtatataaacattctttcaaaaaatttctaa 28564560  T
Q  451 ttgagaagaaattaaaaagtcaaaatggtggcatcatcatatttgaatgattgtagtgtcatattgatatt 521  Q
    ||||| ||||||||||||||  |||| |||| |||| ||||||||| || | |||||| ||||||||||||    
T  28564561 ttgaggagaaattaaaaagtggaaatagtggtatcagcatatttgagtggtcgtagtgccatattgatatt 28564631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 65 - 189
Target Start/End: Complemental strand, 17027136 - 17027018
Alignment:
Q  65 attgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattatttttattcgtgaatatcacttcccatacatttagctta 164  Q
    |||| ||||||||||||||||||||||||||| |||||||||||| ||      ||||||||||||||||| |||||||||||  |||| ||||||||||    
T  17027136 attgtggtatttaattttaaatacttgataatcataaaaataatacta------attattatttttattcgagaatatcacttttcataaatttagctta 17027043  T
Q  165 tggtggtagtgataggaataagaat 189  Q
     |||||| |||||| ||||||||||    
T  17027042 aggtggttgtgataagaataagaat 17027018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 65 - 189
Target Start/End: Complemental strand, 17557628 - 17557510
Alignment:
Q  65 attgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattatttttattcgtgaatatcacttcccatacatttagctta 164  Q
    |||| ||||||||||||||||||||||||||| |||||||||||| ||      ||||||||||||||||| |||||||||||  |||| ||||||||||    
T  17557628 attgtggtatttaattttaaatacttgataatcataaaaataatacta------attattatttttattcgagaatatcacttttcataaatttagctta 17557535  T
Q  165 tggtggtagtgataggaataagaat 189  Q
     |||||| |||||| ||||||||||    
T  17557534 aggtggttgtgataagaataagaat 17557510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 260 - 520
Target Start/End: Original strand, 22714556 - 22714816
Alignment:
Q  260 ttagtctctcttctgtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcattaggaataaaagagtacttt 359  Q
    |||||| || ||| ||||||||||||||  |||  |  ||| ||||||| |||||||||| |  |||||||||||||| || || ||||| |||||||||    
T  22714556 ttagtccctattcggtataatgtccctttggaagtagtaaaggtcttaagaacatagtccattcgataatgtatgttccttcgggataaa-gagtacttt 22714654  T
Q  360 taagatcatagttccttcgag-aacaataatgtctcatcgaaattaagaatgatcttaacggtatataaatattctttcaatgtttttctatttgagaag 458  Q
    |||||||||| | ||||   | || |||||| || |||||||||||||||||||||||     |||||||||||||||| || |||||||| ||  | ||    
T  22714655 taagatcatactccctttttggaataataatatcccatcgaaattaagaatgatcttattaacatataaatattctttcgatatttttctacttttggag 22714754  T
Q  459 aaattaaaaagtcaaaatggtggcatcatcatatttgaatgattgtagtgtcatattgatat 520  Q
    || ||||||||||| |||| | | |||||||||||||| |||| ||| |  |||||||||||    
T  22714755 aagttaaaaagtcataatgatagtatcatcatatttgagtgatcgtaataccatattgatat 22714816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 242 - 519
Target Start/End: Original strand, 38181789 - 38182064
Alignment:
Q  242 taagagtgttcttat-accttagtctctcttctgtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcatt 340  Q
    ||||||||||||||  ||| ||||| || ||| || |||||||||||| |||| || ||  ||||||||||||||||| ||  |||||| || || | ||    
T  38181789 taagagtgttcttaagaccatagtcccttttcggtttaatgtcccttcggaattaaaaatggtcttaaaaacatagtctcttcgataatataagtccctt 38181888  T
Q  341 aggaataaaagagtacttttaagatcatagttccttcgag-aacaataatgtctcatcgaaattaagaatgatcttaacggtatataaatattctttcaa 439  Q
     |||||||| ||||||  ||||||||||||| | ||   | || ||||||||| | ||| |||||| ||||||||||||||||||||||||||||||||     
T  38181889 cggaataaa-gagtaccattaagatcatagtccttttttggaataataatgtcccgtcggaattaaaaatgatcttaacggtatataaatattctttca- 38181986  T
Q  440 tgtttttctatttgagaagaaattaaaaagtcaaaatggtggcatcatcatatttgaatgattgtagtgtcatattgata 519  Q
      || ||  | ||||| ||||||||||||||  ||||||||  |||| ||||||||| || | |||||| ||||||||||    
T  38181987 --ttatttaaattgaggagaaattaaaaagttgaaatggtgagatcaccatatttgagtggtcgtagtgccatattgata 38182064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 32 - 112
Target Start/End: Original strand, 28564363 - 28564443
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagta 112  Q
    ||||||||||||||||| |||| || |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  28564363 ataaaatagaacacacacattagtagtgtttaaattacggtatttaattttaaatatttgataatgataaaaataatagta 28564443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 384 - 521
Target Start/End: Original strand, 28572117 - 28572254
Alignment:
Q  384 aataatgtctcatcgaaattaagaatgatcttaacggtatataaatattctttcaatgtttttctatttgagaagaaattaaaaagtcaaaatggtggca 483  Q
    ||||||||| | ||||||||||||||||||||||  ||||||||| ||||||||||    |||||| ||||| ||||||||||||||  |||| |||| |    
T  28572117 aataatgtcccgtcgaaattaagaatgatcttaaatgtatataaacattctttcaaaaaatttctaattgaggagaaattaaaaagtggaaatagtggta 28572216  T
Q  484 tcatcatatttgaatgattgtagtgtcatattgatatt 521  Q
    ||| ||||||||| || | |||||| ||||||||||||    
T  28572217 tcagcatatttgagtggtcgtagtgccatattgatatt 28572254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 242 - 461
Target Start/End: Original strand, 15951097 - 15951319
Alignment:
Q  242 taagagtgttcttat-accttagtctctcttctgtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcatt 340  Q
    ||||||||||||||  ||| ||||| || ||| || |||||||||||| |||| |||||  ||||| |||||||||||||| ||||||| ||||| | ||    
T  15951097 taagagtgttcttaagaccatagtcccttttcggtttaatgtcccttcggaattaagaatggtctttaaaacatagtccctttgataatatatgtccctt 15951196  T
Q  341 aggaataaaagagtacttttaagatcatagttcct-tcgagaacaataatgtctcatcgaaattaagaatgatcttaacgg--tatataaatattctttc 437  Q
      |||| |||||||||||||||||||||||| ||| |   ||| || |||||  | ||| |||||||||||||||||||||  |||||||| | | ||||    
T  15951197 cagaat-aaagagtacttttaagatcatagtccctatttggaataacaatgttccgtcggaattaagaatgatcttaacggtatatataaaaagtatttc 15951295  T
Q  438 aatgtttttctatttgagaagaaa 461  Q
    ||| ||||||||||| || |||||    
T  15951296 aatatttttctatttaaggagaaa 15951319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 109 - 239
Target Start/End: Original strand, 22714137 - 22714261
Alignment:
Q  109 agtagtagtaattattatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttc 208  Q
    |||| ||||||||||||||||||||| || ||||||||||||||| |||||||||||| |||  |||      |||||||||||||||||||||| ||||    
T  22714137 agtaatagtaattattatttttattcatggatatcacttcccataaatttagcttatgttggctgtg------ataagaataagaattcaattgagtttc 22714230  T
Q  209 ttatttttccttcattcaaatacaatgagtt 239  Q
    || |  ||| |||||||| || |||||||||    
T  22714231 ttgtcattctttcattcatattcaatgagtt 22714261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 119 - 229
Target Start/End: Complemental strand, 19168712 - 19168606
Alignment:
Q  119 attattatttttattcgtgaatatcacttcccatacatttagcttatgg--tggtagtgataggaataagaataagaattcaattgaatttcttattttt 216  Q
    ||||||||||||||||  ||||||||||||||||| |||||||||||||  |||| |||      ||||||||||||||| ||||||||||||||| |||    
T  19168712 attattatttttattctagaatatcacttcccataaatttagcttatggcatggttgtg------ataagaataagaatttaattgaatttcttatattt 19168619  T
Q  217 ccttcattcaaat 229  Q
    |||| ||||||||    
T  19168618 cctttattcaaat 19168606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 20 - 189
Target Start/End: Original strand, 24672375 - 24672538
Alignment:
Q  20 tgggggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaa 119  Q
    ||||||||| |||||||||||| ||| || || | || ||||||||||| | ||||||||| ||||||||| ||||||||| ||||||      || | |    
T  24672375 tgggggtcccaaataaaatagagcacgcagatcaatagtgtttaaattgtgatatttaattgtaaatacttaataatgatagaaataa------taatta 24672468  T
Q  120 ttattatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaat 189  Q
    | |||||||||||||||| ||||||||||| ||| || ||| ||||| |||| || ||| ||||||||||    
T  24672469 tgattatttttattcgtggatatcacttcctataaatgtagtttatgttggttgtcataagaataagaat 24672538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 400 - 519
Target Start/End: Complemental strand, 17020741 - 17020625
Alignment:
Q  400 aattaagaatgatcttaacggtatataaatattctttcaatgtttttctatttgagaagaaattaaaaagtcaaaatggtggcatcatcatatttgaatg 499  Q
    |||||||||||||||||||||||||||||||||||||| || |||   || ||||| ||||||||||||||  ||||||||| |||| ||||||| | ||    
T  17020741 aattaagaatgatcttaacggtatataaatattctttcgatattt---taattgaggagaaattaaaaagtggaaatggtggtatcaccatatttaagtg 17020645  T
Q  500 attgtagtgtcatattgata 519  Q
     |  ||||| ||||||||||    
T  17020644 gtcatagtgccatattgata 17020625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 400 - 519
Target Start/End: Complemental strand, 17551178 - 17551062
Alignment:
Q  400 aattaagaatgatcttaacggtatataaatattctttcaatgtttttctatttgagaagaaattaaaaagtcaaaatggtggcatcatcatatttgaatg 499  Q
    |||||||||||||||||||||||||||||||||||||| || |||   || ||||| ||||||||||||||  ||||||||| |||| ||||||| | ||    
T  17551178 aattaagaatgatcttaacggtatataaatattctttcgatattt---taattgaggagaaattaaaaagtggaaatggtggtatcaccatatttaagtg 17551082  T
Q  500 attgtagtgtcatattgata 519  Q
     |  ||||| ||||||||||    
T  17551081 gtcatagtgccatattgata 17551062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 242 - 496
Target Start/End: Complemental strand, 19167196 - 19166944
Alignment:
Q  242 taagagtgttcttat-accttagtctctcttctgtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcatt 340  Q
    ||||||||||||||  ||| ||||| || ||| || ||||| |||||| |||| |||||  ||||| |||||||||| | |  |||||| || || | ||    
T  19167196 taagagtgttcttaagaccatagtcccttttcggtttaatgacccttcggaattaagaatggtctttaaaacatagttcattcgataatataagtccctt 19167097  T
Q  341 aggaataaaagagtacttttaagatcatagttccttcgagaac-aataatgtctcatcgaaattaagaatgatcttaacggtatataaatattctttcaa 439  Q
     |||||||| ||||||| ||||||||||||| ||||   |||  ||||||||     || || |||||||||||||||||||||||||||||||||||||    
T  19167096 cggaataaa-gagtactattaagatcatagtccctttttgaaataataatgttctgccggaaataagaatgatcttaacggtatataaatattctttcaa 19166998  T
Q  440 tgtttttctatttgagaagaaattaaaaagtcaaaatggtggcatcatcatatttga 496  Q
    |  ||   || ||||| |||||||||||||   ||||||||| |||| |||||||||    
T  19166997 tactt---taattgaggagaaattaaaaagaagaaatggtggtatcaccatatttga 19166944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 242 - 462
Target Start/End: Complemental strand, 1807996 - 1807776
Alignment:
Q  242 taagagtgttcttat-accttagtctctcttctgtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcatt 340  Q
    ||||||||||||||  ||| ||||| || ||| || |||||||| ||| |||| |||||  ||||||||||||| ||||||  |||||   |||| | ||    
T  1807996 taagagtgttcttaagaccatagtcacttttcggtttaatgtccattcggaattaagaatggtcttaaaaacattgtcccttcgataa---atgtccctt 1807900  T
Q  341 aggaataaaagagtacttttaagatcatagttcct-tcgagaacaataatgtctcatcgaaattaagaatgatcttaacggta--tataaatattctttc 437  Q
      ||||||| || |||||||||||||||||| ||| |   ||| || |||||| | |  ||||||||||||||||||||||||  |||||| | | ||||    
T  1807899 cagaataaa-gattacttttaagatcatagtccctatttggaataacaatgtcccgtaaaaattaagaatgatcttaacggtatatataaaaagtatttc 1807801  T
Q  438 aatgtttttctatttgagaagaaat 462  Q
    ||| |||||||||||||| ||||||    
T  1807800 aatatttttctatttgaggagaaat 1807776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 263 - 462
Target Start/End: Complemental strand, 36684109 - 36683909
Alignment:
Q  263 gtctctcttctgtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcattaggaataaaagagtacttttaa 362  Q
    |||||| ||| || |||||||||||| |||| ||||   ||||||||| |||||||| |  |||| | ||||| | ||  ||||||| ||||||||||||    
T  36684109 gtctcttttcggtttaatgtcccttcggaattaagagtggtcttaaaa-catagtccattcgatattatatgtcccttcagaataaa-gagtacttttaa 36684012  T
Q  363 gatcatagttcct-tcgagaacaataatgtctcatcgaaattaagaatgatcttaacggta--tataaatattctttcaatgtttttctatttgagaaga 459  Q
    ||||||||| ||| |   ||| || |||||| | ||  |||||||||||||||||||||||  |||||| | | ||||||| |||||||||||||| |||    
T  36684011 gatcatagtccctatttggaataacaatgtcccgtcataattaagaatgatcttaacggtatatataaaaagtatttcaatatttttctatttgaggaga 36683912  T
Q  460 aat 462  Q
    |||    
T  36683911 aat 36683909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 32 - 107
Target Start/End: Complemental strand, 33100615 - 33100541
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaatttt-aaatacttgataatgataaaaataa 107  Q
    ||||||||||| ||||||  || |||| |||||||||| |||||||||||| ||||||||||||||||||| |||||    
T  33100615 ataaaatagaatacacat--taataatctttaaattgcagtatttaatttttaaatacttgataatgataacaataa 33100541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 321
Target Start/End: Complemental strand, 2966183 - 2966101
Alignment:
Q  240 aataagagtgttcttat-accttagtctctcttctgtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccct 321  Q
    ||||||||||||||||  ||||||||| || ||| |||||| ||| |||| |||| |||||  ||||||||||||||||||||    
T  2966183 aataagagtgttcttaagaccttagtccctgttcggtataacgtctcttcagaattaagaacggtcttaaaaacatagtccct 2966101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 183 - 229
Target Start/End: Complemental strand, 17021244 - 17021198
Alignment:
Q  183 taagaataagaattcaattgaatttcttatttttccttcattcaaat 229  Q
    |||||||||||||| |||| |||||||||| ||||||||||||||||    
T  17021244 taagaataagaatttaattaaatttcttatatttccttcattcaaat 17021198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 183 - 229
Target Start/End: Complemental strand, 17551681 - 17551635
Alignment:
Q  183 taagaataagaattcaattgaatttcttatttttccttcattcaaat 229  Q
    |||||||||||||| |||| |||||||||| ||||||||||||||||    
T  17551681 taagaataagaatttaattaaatttcttatatttccttcattcaaat 17551635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 494
Target Start/End: Original strand, 24672886 - 24673117
Alignment:
Q  258 ccttagtctctcttctgtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcattaggaataaaagagtact 357  Q
    ||||| ||||| ||| ||||||||||||||| |||| |||||| |||| || |||||||| | |  |||||| ||||| | ||  ||||||| ||||| |    
T  24672886 ccttactctctattcggtataatgtcccttcagaattaagaaaggtctaaagaacatagttcattcgataatatatgtcccttcagaataaa-gagtatt 24672984  T
Q  358 tttaagatcatagttccttcgagaacaataatgtctcatcgaaattaagaatgatcttaacggtatataaatattctttcaatgtttttctatttgagaa 457  Q
    ||||||| ||  || | ||   ||| | |||||||   ||| ||||||||||||| ||||   |||||||||||||||||||  | |||||| ||  | |    
T  24672985 tttaagacca--gtcctttttggaatagtaatgtccagtcggaattaagaatgatgttaaatttatataaatattctttcaa--tatttctacttttgga 24673080  T
Q  458 gaaattaaaaagtcaaaatggtggcatcatcatattt 494  Q
    ||| ||||||||||| |||||||| |||| |||||||    
T  24673081 gaagttaaaaagtcacaatggtggtatcaccatattt 24673117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 109
Target Start/End: Complemental strand, 7002673 - 7002594
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattt--taaatacttgataatgataaaaataata 109  Q
    ||||||||||| ||| | |||| || ||||||||||| ||||||||||||  |||||||  ||||| |||||||||||||    
T  7002673 ataaaatagaatacatacattagtagtgtttaaattgtggtatttaattttctaaatacccgataaagataaaaataata 7002594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 73
Target Start/End: Complemental strand, 17021294 - 17021243
Alignment:
Q  22 ggggtcctaaataaaatagaacacacatattattaatgtttaaattgcggta 73  Q
    ||||||| | ||||||||||||||||| |||| || ||||||||||||||||    
T  17021294 ggggtcccacataaaatagaacacacacattagtagtgtttaaattgcggta 17021243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 73
Target Start/End: Complemental strand, 17551731 - 17551680
Alignment:
Q  22 ggggtcctaaataaaatagaacacacatattattaatgtttaaattgcggta 73  Q
    ||||||| | ||||||||||||||||| |||| || ||||||||||||||||    
T  17551731 ggggtcccacataaaatagaacacacacattagtagtgtttaaattgcggta 17551680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 452
Target Start/End: Complemental strand, 33416994 - 33416886
Alignment:
Q  348 aaagagtacttttaagatcatagttcct-tcgagaacaataa-tgtctcatcgaaattaagaatgatcttaacggta--tataaatattctttcaatgtt 443  Q
    |||||||||||||||||||||||| ||| |   ||| || || |||| | ||||||||||||||||| |||||||||  |||||| | | ||||||| ||    
T  33416994 aaagagtacttttaagatcatagtccctatttggaataacaaatgtcccgtcgaaattaagaatgattttaacggtatatataaaaagtatttcaatatt 33416895  T
Q  444 tttctattt 452  Q
    |||||||||    
T  33416894 tttctattt 33416886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 101; Significance: 8e-50; HSPs: 4)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 32 - 234
Target Start/End: Complemental strand, 30205 - 30015
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattattttta 131  Q
    ||||||||||||||||| |||| || ||||||||||||||||||||||||||| ||| |||||||||||||||||||      |||||||||||||||||    
T  30205 ataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaactacatgataatgataaaaataat------agtaattattattttta 30112  T
Q  132 ttcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttccttcattcaaatac 231  Q
    |||| ||||||||||||||||| |||||| |||||||||| |||      ||||||||||||||| ||||||||||||||| |||||||| || |||| |    
T  30111 ttcgagaatatcacttcccataaatttagtttatggtggttgtg------ataagaataagaatttaattgaatttcttatatttccttcgttgaaatcc 30018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 277 - 519
Target Start/End: Complemental strand, 25969 - 25730
Alignment:
Q  277 taatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcattaggaataaaagagtacttttaagatcatagttcctt 376  Q
    ||||||||||||  ||| |||||  ||||||||||||||||||||  |||||| || || | || |||||||| |||| || ||||||||||||| ||||    
T  25969 taatgtcccttcgaaattaagaatggtcttaaaaacatagtcccttcgataatataagtcccttcggaataaa-gagtgctattaagatcatagtccctt 25871  T
Q  377 cgag-aacaataatgtctcatcgaaattaagaatgatcttaacggtatataaatattctttcaatgtttttctatttgagaagaaattaaaaagtcaaaa 475  Q
       | || ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||   || ||||| ||||||||||||||  |||    
T  25870 tttggaataataatgtctcgtcggaattaagaatgatcttaacggtatataaatattctttcaatattt---taattgaggagaaattaaaaagtggaaa 25774  T
Q  476 tggtggcatcatcatatttgaatgattgtagtgtcatattgata 519  Q
    |||||| |||| ||||||||| || | |||||||||||||||||    
T  25773 tggtggtatcaccatatttgagtggtcgtagtgtcatattgata 25730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 267 - 521
Target Start/End: Complemental strand, 29698 - 29448
Alignment:
Q  267 ctcttctgtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcattaggaataaaagagtacttttaagatc 366  Q
    |||||| || |||||||||||| |||| |||||  |||||||||||||||||||| ||||||| || || | || ||||| || |||| || ||||||||    
T  29698 ctcttcggtttaatgtcccttcagaattaagaatggtcttaaaaacatagtccctttgataatataagtcccttcggaatgaa-gagt-ctattaagatc 29601  T
Q  367 atagttccttcgag-aacaataatgtctcatcgaaattaagaatgatcttaacggtatataaatattctttcaatgtttttctatttgagaagaaattaa 465  Q
    ||||| ||||   | || ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||   || ||||  |||||||||    
T  29600 atagtccctttttggaataataatgtctcgtcgaaattaagaatgatcttaacagtatataaatattctttcaatattt---taattgaagagaaattaa 29504  T
Q  466 aaagtcaaaatggtggcatcatcatatttgaatgattgtagtgtcatattgatatt 521  Q
    |||||  |||||||||  ||| ||||||||| || | ||||||  |||||||||||    
T  29503 aaagtggaaatggtggtgtcaccatatttgagtggtcgtagtgcaatattgatatt 29448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 26469 - 26393
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataat 108  Q
    ||||||||||||||||| |||| || ||||||||| | ||||||||||||||||||| ||||||| || ||||||||    
T  26469 ataaaatagaacacacacattagtagtgtttaaatagaggtatttaattttaaatacctgataataatgaaaataat 26393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0690 (Bit Score: 98; Significance: 5e-48; HSPs: 2)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 32 - 239
Target Start/End: Complemental strand, 6260 - 6065
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattattttta 131  Q
    |||| |||||| ||||| |||| |  ||||||||||| |||||||||||||||||||||||||||||||||||||||||||      |||||||||||||    
T  6260 ataagatagaatacacacattagtggtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagta------attattattttta 6167  T
Q  132 ttcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttccttcattcaaatac 231  Q
    |||||||||||||||||||||| ||||||||||||| ||| |||      |||||||||||||||||  | |||||||||| ||||||||||||||||      
T  6166 ttcgtgaatatcacttcccataaatttagcttatggaggttgtg------ataagaataagaattcacctaaatttcttatctttccttcattcaaatca 6073  T

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Target: scaffold0690; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 348 - 496
Target Start/End: Complemental strand, 5742 - 5595
Alignment:
Q  348 aaagagtacttttaagatcatagttccttcgagaacaataatgtctcatcgaaattaagaatgatcttaacggtatataaatattctttcaatgtttttc 447  Q
    |||||||||||||||||||||||| | ||   ||| || |||||||||| | ||||||||||||||||||| |||||||||||||||||||||  |||||    
T  5742 aaagagtacttttaagatcatagtccattttggaataaaaatgtctcattggaattaagaatgatcttaacagtatataaatattctttcaat-attttc 5644  T
Q  448 tatttgagaagaaattaaaaagtcaaaatggtggcatcatcatatttga 496  Q
     ||||||| |||||||||||| || || |||||  |||| |||||||||    
T  5643 gatttgaggagaaattaaaaaatcgaagtggtgttatcaccatatttga 5595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 93; Significance: 5e-45; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 240 - 519
Target Start/End: Original strand, 147934 - 148213
Alignment:
Q  240 aataagagtgttcttat-accttagtctctcttctgtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttca 338  Q
    ||||||||||||||||  ||||||||| || |||  ||||||||||| || |||| ||||||  ||||||||||||||||| |  |||||||||| | |     
T  147934 aataagagtgttcttaagaccttagtccctattcgatataatgtcccatcggaattaagaaagatcttaaaaacatagtccattcgataatgtatctccc 148033  T
Q  339 ttaggaataaaagagtacttttaagatcatagttccttcgagaacaataatgtctcatcgaaattaagaatgatcttaacggtatataaatattctttca 438  Q
    ||  ||||||| || |||||||||||||||||| ||||   ||| ||||||||| |||| ||||||||||||||||||   ||||||||||||||||| |    
T  148034 ttcagaataaa-gaatacttttaagatcatagtccctttttgaaaaataatgtcccatcaaaattaagaatgatcttagtagtatataaatattctttaa 148132  T
Q  439 atgtttttctatttgagaagaaattaaaaagtcaaaatggtggcatcatcatatttgaatgattgtagtgtcatattgata 519  Q
    || |||||||||||||| |||| |||||||||| ||| |||||  ||| |||||| || || |||||||  ||||||||||    
T  148133 atatttttctatttgaggagaatttaaaaagtcgaaaaggtggtttcaccatattagagtggttgtagtaccatattgata 148213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 88; Significance: 5e-42; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 32 - 229
Target Start/End: Complemental strand, 36150 - 35966
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattattttta 131  Q
    |||||||||||| |||  |||| || |||||||| ||||||||||||||||||||| ||||||||||||||||||||      |||||||||||||||||    
T  36150 ataaaatagaactcacgcattagtagtgtttaaactgcggtatttaattttaaatatttgataatgataaaaataat------agtaattattattttta 36057  T
Q  132 ttcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttccttcattcaaat 229  Q
    || ||||||||||||||||||| ||||||| ||||||||| |||      ||||||||||||||| |||| |||||||||| ||||||||||| ||||    
T  36056 tttgtgaatatcacttcccataaatttagc-tatggtggttgtg------ataagaataagaatttaattaaatttcttatatttccttcatttaaat 35966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 74; Significance: 1e-33; HSPs: 2)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 8149 - 7990
Alignment:
Q  20 tgggggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaa 119  Q
    ||||||||| | |||| |||||||||||| |||| || ||||||||||| ||||||||||||||||||||||||||||||||||     | || ||||||    
T  8149 tgggggtcccacataagatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaa-----aataatagtaa 8055  T
Q  120 ttattatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataa 185  Q
    |||||| ||||||||| |||||||||||  |||| ||||||||||||| ||| |||||| ||||||    
T  8054 ttatta-ttttattcgagaatatcacttttcataaatttagcttatggcggttgtgataagaataa 7990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 277 - 462
Target Start/End: Complemental strand, 7620 - 7434
Alignment:
Q  277 taatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcattaggaataaaagagtacttttaagatcatagttcct- 375  Q
    ||||||||||||  ||| |||||  ||||||||| ||||||||||  |||||| |||||   ||  ||||||| ||||||||||||||||||||| |||     
T  7620 taatgtcccttcgaaattaagaatggtcttaaaa-catagtcccttcgataatatatgtctcttcagaataaa-gagtacttttaagatcatagtcccta 7523  T
Q  376 tcgagaacaataatgtctcatcgaaattaagaatgatcttaacggta--tataaatattctttcaatgtttttctatttgagaagaaat 462  Q
    |   ||| || |||||| | ||  |||||||||||||||||||||||  |||||| | | ||||||| |||||||||||||| ||||||    
T  7522 tttggaataacaatgtcccgtcagaattaagaatgatcttaacggtatatataaaaagtatttcaatatttttctatttgaggagaaat 7434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 71; Significance: 6e-32; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 32 - 185
Target Start/End: Complemental strand, 5092 - 4946
Alignment:
Q  32 ataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattattttta 131  Q
    |||||||||||||| || |||| || ||||||||||| ||||||||||||||||||||||||| |||||||||||||      ||||||||||| |||||    
T  5092 ataaaatagaacactcacattagtagtgtttaaattgtggtatttaattttaaatacttgatagtgataaaaataat------agtaattatta-tttta 5000  T
Q  132 ttcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataa 185  Q
    || | |||||| |||| ||||| ||||||||||||||||| |||||| ||||||    
T  4999 ttagagaatattactttccataaatttagcttatggtggttgtgataagaataa 4946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 22 - 234
Target Start/End: Original strand, 442997 - 443197
Alignment:
Q  22 ggggtcctaaataaaatagaacacacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaatt 121  Q
    ||||||| | ||||||||||||||||| |||| |   |||||||||| |||||||||||||||||| |||||||||||||||||||      ||||||||    
T  442997 ggggtcccacataaaatagaacacacacattagttgggtttaaattgtggtatttaattttaaatatttgataatgataaaaataa------tagtaatt 443090  T
Q  122 attatttttattcgtgaatatcacttcccatacatttagcttatggtggtagtgataggaataagaataagaattcaattgaatttcttatttttccttc 221  Q
    |||||||||||| | |||||||| || | ||| ||||| |||||| |||| |||      |||| ||||| | || |||| |||||||||| ||||||||    
T  443091 attatttttattagagaatatcattttcaataaatttaacttatgatggttgtg------ataaaaataatagtttaattaaatttcttatatttccttc 443184  T
Q  222 attcaaatacaat 234  Q
    |||||||| ||||    
T  443185 attcaaatccaat 443197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 277 - 462
Target Start/End: Original strand, 443525 - 443711
Alignment:
Q  277 taatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcattaggaataaaagagtacttttaagatcatagttcct- 375  Q
    |||||| ||||| |||| |||||  ||||||||| ||||||||||  |||||| ||||| | ||  ||||||| |||||||||||| |||||||| |||     
T  443525 taatgttccttcggaattaagaatggtcttaaaa-catagtcccttcgataatatatgtcccttcagaataaa-gagtacttttaaaatcatagtcccta 443622  T
Q  376 tcgagaacaataatgtctcatcgaaattaagaatgatcttaacggt--atataaatattctttcaatgtttttctatttgagaagaaat 462  Q
    |   ||| || |||||| | | | ||||||||||||||||||||||  ||||||| | | ||||||| |||||||||||||| ||||||    
T  443623 tttggaataacaatgtcccgttggaattaagaatgatcttaacggtacatataaaaagtatttcaatatttttctatttgaggagaaat 443711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 70; Significance: 3e-31; HSPs: 2)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 44 - 165
Target Start/End: Complemental strand, 4988 - 4872
Alignment:
Q  44 acacatattattaatgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtagtagtaattattatttttattcgtgaatatc 143  Q
    |||||||||| |  ||||||| ||||||||||||||||||||||||||||||||||||||     | || ||||||||||||||||||||||||||||||    
T  4988 acacatattagttgtgtttaagttgcggtatttaattttaaatacttgataatgataaaa-----aataatagtaattattatttttattcgtgaatatc 4894  T
Q  144 acttcccatacatttagcttat 165  Q
    |||||||||| |||||| ||||    
T  4893 acttcccataaatttagtttat 4872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 274 - 376
Target Start/End: Complemental strand, 4490 - 4390
Alignment:
Q  274 gtataatgtcccttctgaatcaagaaaagtcttaaaaacatagtccctgtgataatgtatgttcattaggaataaaagagtacttttaagatcatagttc 373  Q
    ||||||||||||||| |||| |||||  ||||||||| ||||||||||  |||||| || || | || |||||||| || || |||||||||||||||||    
T  4490 gtataatgtcccttcggaattaagaat-gtcttaaaagcatagtcccttcgataatatacgtcccttcggaataaa-gaatatttttaagatcatagttc 4393  T
Q  374 ctt 376  Q
    |||    
T  4392 ctt 4390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 65 - 109
Target Start/End: Original strand, 3904 - 3948
Alignment:
Q  65 attgcggtatttaattttaaatacttgataatgataaaaataata 109  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  3904 attgcggtatttaatttcaaatacttgataatgataaaaataata 3948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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