View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14639_high_16 (Length: 235)
Name: NF14639_high_16
Description: NF14639
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14639_high_16 |
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Alignment Details
Target: chr1 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 9 - 219
Target Start/End: Original strand, 26600686 - 26600895
Alignment:
| Q |
9 |
actgtgcatgcaggtttttggtttctgtgtactgatcatatggtataagaagcaaattcttttcctttgtttattagcttgtgtatatgtttctaattac |
108 |
Q |
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| T |
26600686 |
actgtgcatgcaggtttttggtttctgtgtactgatcatatggtataagaagcaaattcttttcctttgtttattagcttgtg--tatgtttctaattac |
26600783 |
T |
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| Q |
109 |
atcgaatttgacgaaatcacattgacactgaatttgttaatgctttaaagtgta-atttttatcaaaactacgacggcgtgcagtgatttcacaaagttt |
207 |
Q |
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| T |
26600784 |
accgagtttgacgaaatcacattgacactaaatttattaatgctttaaaatgtatatttttgtcaaaactacgatgacgtacagtgatttcacaaagttt |
26600883 |
T |
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| Q |
208 |
attccaaacata |
219 |
Q |
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| T |
26600884 |
attccaaacata |
26600895 |
T |
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