View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14639_high_17 (Length: 228)
Name: NF14639_high_17
Description: NF14639
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14639_high_17 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 38557442 - 38557215
Alignment:
| Q |
1 |
catggagatgcaacattagaaattgttttattagcaacacattttttgcagccataggttcattctaaacgttaatcattctattcatagtaggcctgcc |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
38557442 |
catggagatgcaacattagaaattgttttattagcaacacattttttgcagccataggttcattctaaacgttaagcattctattcatagtaggcctgcc |
38557343 |
T |
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| Q |
101 |
aatactgaatattcatagagcagatgaaaaccaatgaaacgcattcttcttaaaaacattaatctttttcaaacagagttgaagaccaaaacatatggaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38557342 |
aatactgaatattcatagagcagatgaaaaccaatgaaacgcattcttcttaaaaacattaatctttttcaaacagagttgaagaccaaaacatatggaa |
38557243 |
T |
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| Q |
201 |
tgtaaaacaaaggtcgttttcctcatca |
228 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
38557242 |
tgtaaaacaaaggtcgttttcctcatca |
38557215 |
T |
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