View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14639_low_4 (Length: 431)

Name: NF14639_low_4
Description: NF14639
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14639_low_4
NF14639_low_4
[»] chr5 (34 HSPs)
chr5 (99-233)||(8568541-8568677)
chr5 (304-414)||(8568739-8568850)
chr5 (11-62)||(20502091-20502142)
chr5 (11-65)||(29451894-29451948)
chr5 (11-65)||(38978743-38978797)
chr5 (11-62)||(29874410-29874461)
chr5 (18-62)||(33247391-33247435)
chr5 (11-63)||(33970750-33970802)
chr5 (11-65)||(7537022-7537076)
chr5 (19-65)||(8680642-8680688)
chr5 (19-65)||(17225159-17225205)
chr5 (11-57)||(24173513-24173559)
chr5 (11-65)||(27600760-27600813)
chr5 (11-65)||(32455232-32455286)
chr5 (11-65)||(35204925-35204978)
chr5 (11-65)||(35212181-35212234)
chr5 (11-65)||(73877-73931)
chr5 (11-65)||(5355552-5355606)
chr5 (27-65)||(5355660-5355698)
chr5 (11-65)||(9630328-9630382)
chr5 (11-65)||(29002835-29002889)
chr5 (132-188)||(1199519-1199576)
chr5 (20-65)||(7313928-7313973)
chr5 (25-62)||(13278993-13279030)
chr5 (20-65)||(13932563-13932608)
chr5 (25-65)||(30132843-30132883)
chr5 (19-65)||(73785-73831)
chr5 (138-184)||(4904921-4904967)
chr5 (138-184)||(7442423-7442469)
chr5 (11-65)||(13789825-13789879)
chr5 (19-65)||(13932462-13932508)
chr5 (19-65)||(29031137-29031183)
chr5 (11-65)||(38394429-38394483)
chr5 (168-233)||(4922078-4922145)
[»] chr7 (41 HSPs)
chr7 (122-232)||(28132246-28132357)
chr7 (11-65)||(40198605-40198659)
chr7 (11-65)||(41487792-41487846)
chr7 (11-65)||(12806909-12806963)
chr7 (11-65)||(47484114-47484168)
chr7 (11-58)||(24932391-24932438)
chr7 (11-65)||(18064723-18064777)
chr7 (11-65)||(27320295-27320349)
chr7 (11-58)||(41395755-41395802)
chr7 (11-64)||(24164518-24164571)
chr7 (11-64)||(45123247-45123300)
chr7 (19-65)||(2523871-2523917)
chr7 (19-65)||(10007677-10007723)
chr7 (11-65)||(10674124-10674178)
chr7 (19-61)||(22618264-22618306)
chr7 (19-65)||(24164617-24164663)
chr7 (11-60)||(37006549-37006599)
chr7 (11-65)||(41088853-41088907)
chr7 (11-61)||(45025599-45025649)
chr7 (19-60)||(3633197-3633238)
chr7 (22-62)||(41088956-41088996)
chr7 (19-62)||(29559441-29559484)
chr7 (122-193)||(37932109-37932180)
chr7 (11-42)||(47280266-47280297)
chr7 (19-57)||(3633292-3633330)
chr7 (138-184)||(5216504-5216550)
chr7 (19-61)||(7456424-7456466)
chr7 (19-65)||(13807243-13807289)
chr7 (141-183)||(30514636-30514678)
chr7 (19-65)||(34840611-34840657)
chr7 (19-65)||(40234767-40234813)
chr7 (19-65)||(41487892-41487938)
chr7 (11-65)||(47612291-47612345)
chr7 (19-65)||(47612391-47612437)
chr7 (19-64)||(10674224-10674269)
chr7 (19-64)||(13860318-13860363)
chr7 (25-65)||(5347724-5347764)
chr7 (161-233)||(7345115-7345190)
chr7 (160-233)||(33698507-33698582)
chr7 (13-65)||(33901039-33901091)
chr7 (141-217)||(39878651-39878730)
[»] chr8 (18 HSPs)
chr8 (11-65)||(13831968-13832022)
chr8 (12-65)||(34604782-34604835)
chr8 (11-65)||(45372706-45372760)
chr8 (11-65)||(7548590-7548645)
chr8 (11-65)||(34745258-34745312)
chr8 (11-65)||(43292569-43292623)
chr8 (11-65)||(44579986-44580040)
chr8 (11-65)||(29690437-29690491)
chr8 (11-65)||(35583884-35583938)
chr8 (19-65)||(43932050-43932096)
chr8 (11-65)||(43932142-43932196)
chr8 (122-219)||(2086554-2086653)
chr8 (19-65)||(34604882-34604928)
chr8 (19-65)||(35583984-35584030)
chr8 (19-57)||(43292669-43292707)
chr8 (19-65)||(43409835-43409881)
chr8 (147-233)||(17785209-17785297)
chr8 (138-186)||(9880770-9880818)
[»] chr4 (51 HSPs)
chr4 (11-65)||(54864065-54864119)
chr4 (12-65)||(8347586-8347639)
chr4 (11-65)||(35877315-35877369)
chr4 (11-65)||(37895348-37895402)
chr4 (11-62)||(43141859-43141910)
chr4 (11-65)||(36196458-36196512)
chr4 (11-62)||(32193568-32193619)
chr4 (11-65)||(43556784-43556839)
chr4 (11-62)||(50511338-50511389)
chr4 (19-65)||(4418198-4418244)
chr4 (19-65)||(29686401-29686447)
chr4 (11-65)||(33622973-33623027)
chr4 (19-65)||(52136700-52136746)
chr4 (20-65)||(25756713-25756758)
chr4 (11-60)||(50511520-50511569)
chr4 (12-61)||(54673315-54673364)
chr4 (19-63)||(1100899-1100943)
chr4 (13-61)||(19350705-19350753)
chr4 (11-59)||(52966488-52966536)
chr4 (26-65)||(17316588-17316627)
chr4 (11-62)||(35929014-35929065)
chr4 (19-65)||(7086232-7086278)
chr4 (19-65)||(25756813-25756859)
chr4 (19-65)||(32193476-32193522)
chr4 (19-65)||(37895256-37895302)
chr4 (11-65)||(53225737-53225791)
chr4 (11-63)||(4418100-4418152)
chr4 (169-233)||(29696673-29696739)
chr4 (125-231)||(42150197-42150302)
chr4 (19-65)||(3094363-3094409)
chr4 (19-61)||(9894630-9894672)
chr4 (11-65)||(24100760-24100814)
chr4 (26-64)||(28020585-28020623)
chr4 (19-57)||(31853168-31853206)
chr4 (19-65)||(33622881-33622927)
chr4 (19-65)||(36196366-36196412)
chr4 (11-61)||(42159978-42160028)
chr4 (19-65)||(44111846-44111892)
chr4 (19-65)||(48361053-48361099)
chr4 (19-65)||(56491073-56491119)
chr4 (25-62)||(27587250-27587287)
chr4 (19-64)||(43141768-43141813)
chr4 (11-52)||(52278060-52278101)
chr4 (19-56)||(54673411-54673448)
chr4 (19-64)||(54864165-54864210)
chr4 (25-65)||(19150659-19150699)
chr4 (19-51)||(28815880-28815912)
chr4 (19-63)||(43020759-43020803)
chr4 (148-233)||(45043388-45043475)
chr4 (27-63)||(50511391-50511427)
chr4 (148-233)||(54041983-54042069)
[»] chr3 (35 HSPs)
chr3 (11-65)||(45113827-45113881)
chr3 (11-62)||(27302172-27302223)
chr3 (11-60)||(21944295-21944344)
chr3 (11-61)||(50660031-50660081)
chr3 (11-65)||(53703731-53703785)
chr3 (12-65)||(2544438-2544491)
chr3 (11-55)||(43901592-43901636)
chr3 (11-65)||(19227401-19227455)
chr3 (19-65)||(31376176-31376222)
chr3 (11-65)||(31376268-31376322)
chr3 (11-65)||(39617004-39617058)
chr3 (123-199)||(25590955-25591031)
chr3 (19-65)||(53703831-53703878)
chr3 (19-65)||(21662887-21662933)
chr3 (19-65)||(39616912-39616958)
chr3 (11-65)||(46220367-46220421)
chr3 (11-57)||(53284325-53284371)
chr3 (11-65)||(53442000-53442054)
chr3 (132-188)||(2032308-2032365)
chr3 (11-55)||(36191485-36191529)
chr3 (25-65)||(51516959-51516999)
chr3 (11-62)||(16123761-16123811)
chr3 (22-61)||(48643609-48643648)
chr3 (19-65)||(2544560-2544606)
chr3 (19-65)||(8769235-8769280)
chr3 (11-65)||(24489406-24489459)
chr3 (11-65)||(28406560-28406614)
chr3 (141-232)||(33863376-33863469)
chr3 (170-233)||(46970129-46970194)
chr3 (11-65)||(48643697-48643751)
chr3 (158-233)||(50406661-50406738)
chr3 (12-65)||(42896143-42896196)
chr3 (122-233)||(49952369-49952483)
chr3 (19-51)||(4190725-4190757)
chr3 (147-232)||(41054289-41054376)
[»] chr2 (18 HSPs)
chr2 (11-65)||(15239785-15239839)
chr2 (11-65)||(28143838-28143892)
chr2 (11-65)||(36103486-36103540)
chr2 (12-65)||(40534607-40534660)
chr2 (11-65)||(45076343-45076397)
chr2 (132-188)||(6150203-6150260)
chr2 (11-59)||(23464589-23464638)
chr2 (11-52)||(27306725-27306766)
chr2 (19-65)||(12873724-12873770)
chr2 (11-65)||(25795331-25795385)
chr2 (22-62)||(25795242-25795282)
chr2 (19-62)||(6971671-6971714)
chr2 (11-65)||(29866175-29866229)
chr2 (19-65)||(41153212-41153258)
chr2 (158-203)||(37660668-37660713)
chr2 (138-182)||(13285665-13285709)
chr2 (25-65)||(13775818-13775858)
chr2 (11-55)||(44283626-44283670)
[»] chr1 (24 HSPs)
chr1 (122-233)||(47630585-47630699)
chr1 (11-65)||(13320396-13320450)
chr1 (11-65)||(52279327-52279381)
chr1 (11-65)||(25238666-25238720)
chr1 (19-65)||(48565628-48565674)
chr1 (11-65)||(51590431-51590485)
chr1 (19-65)||(51590531-51590577)
chr1 (11-45)||(32837657-32837691)
chr1 (11-65)||(45977187-45977241)
chr1 (26-65)||(26924214-26924253)
chr1 (19-62)||(29256699-29256742)
chr1 (19-62)||(50155399-50155442)
chr1 (19-62)||(52030872-52030915)
chr1 (19-65)||(5966875-5966921)
chr1 (19-65)||(18038689-18038735)
chr1 (19-65)||(18038789-18038835)
chr1 (11-49)||(18744576-18744614)
chr1 (19-65)||(22182866-22182912)
chr1 (132-201)||(34111748-34111818)
chr1 (19-65)||(34174887-34174933)
chr1 (19-61)||(34768375-34768417)
chr1 (25-65)||(22182766-22182806)
chr1 (147-187)||(32472277-32472317)
chr1 (19-51)||(52112972-52113004)
[»] chr6 (21 HSPs)
chr6 (11-65)||(30438744-30438798)
chr6 (11-64)||(12605703-12605756)
chr6 (11-65)||(28605663-28605717)
chr6 (148-233)||(24163509-24163596)
chr6 (132-230)||(10546748-10546850)
chr6 (11-61)||(12217584-12217635)
chr6 (122-233)||(31893935-31894049)
chr6 (11-65)||(2913334-2913388)
chr6 (19-65)||(2913434-2913480)
chr6 (11-65)||(10145308-10145362)
chr6 (19-65)||(23916228-23916274)
chr6 (19-65)||(31632204-31632250)
chr6 (19-64)||(18491758-18491803)
chr6 (19-62)||(8265073-8265116)
chr6 (11-62)||(17598115-17598166)
chr6 (122-187)||(3651853-3651919)
chr6 (163-233)||(30496429-30496502)
chr6 (11-52)||(9343134-9343175)
chr6 (122-233)||(21453299-21453413)
chr6 (20-56)||(359647-359683)
chr6 (11-55)||(3847501-3847545)
[»] scaffold0200 (1 HSPs)
scaffold0200 (11-62)||(25707-25759)
[»] scaffold0176 (1 HSPs)
scaffold0176 (14-55)||(19308-19349)
[»] scaffold0059 (1 HSPs)
scaffold0059 (19-65)||(26587-26633)
[»] scaffold0287 (2 HSPs)
scaffold0287 (19-60)||(12847-12888)
scaffold0287 (19-57)||(12755-12793)
[»] scaffold0767 (1 HSPs)
scaffold0767 (13-65)||(3810-3862)
[»] scaffold0110 (1 HSPs)
scaffold0110 (19-65)||(40292-40338)
[»] scaffold0023 (1 HSPs)
scaffold0023 (19-65)||(112824-112870)


Alignment Details
Target: chr5 (Bit Score: 98; Significance: 4e-48; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 99 - 233
Target Start/End: Original strand, 8568541 - 8568677
Alignment:
Q  99 taacacatgtttatacgaaagtgttttattctaatgtagggatatttgtgtcatttactaaatatataactttcttttctttcactttctattcattttc 198  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||    
T  8568541 taacatatgtttatatgaaagtgttttattctaatgtagggatatttgtgtcatttactaaatatatcactttctttcctttcactttctattcactttc 8568640  T
Q  199 a--tttaccaaacaaccaaaaaatcatttcactttcc 233  Q
    |  | |||||||||| |||||||||||||||||||||    
T  8568641 acttctaccaaacaatcaaaaaatcatttcactttcc 8568677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 304 - 414
Target Start/End: Original strand, 8568739 - 8568850
Alignment:
Q  304 gtcatccaaataaagcc-ttattatgtgatttatatcattgtatgtataactgtcgtattcatatatgtatgaactataacccgcgcgtgagattgcttc 402  Q
    |||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  8568739 gtcatccaaacaaagcccttattatgtgatatatatcattgtatgtataactgtcgtattcatatatgtatgaattataacccgcgcgtgagattgcttc 8568838  T
Q  403 tactgcagcagt 414  Q
    ||||||||||||    
T  8568839 tactgcagcagt 8568850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 20502142 - 20502091
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagg 62  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  20502142 attattctatgaatctaaaaagtcaactttttcttataataaggaccggagg 20502091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 29451948 - 29451894
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  29451948 attattctatgaatctaaaaaatcaactttttcttataataaggaccggagggag 29451894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 38978797 - 38978743
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  38978797 attattctatgaatctaaaaagtcaactttttcttataataaggactggagggag 38978743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 29874410 - 29874461
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagg 62  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  29874410 attattctatgaacctaaaaagttaactttttcttatattaaggaccggagg 29874461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 33247391 - 33247435
Alignment:
Q  18 tatgaacctaaaaagtcaactttttcttataataaggaccggagg 62  Q
    |||||||||||||||||||||||||||||||| ||||||||||||    
T  33247391 tatgaacctaaaaagtcaactttttcttataacaaggaccggagg 33247435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 33970750 - 33970802
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggaggg 63  Q
    ||||||||||||| ||||| | |||||||||||||||||||||||||||||||    
T  33970750 attattctatgaaactaaacaatcaactttttcttataataaggaccggaggg 33970802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 7537076 - 7537022
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    |||||||||| ||||||| ||||||| |||||||||||||||| |||||||||||    
T  7537076 attattctattaacctaagaagtcaattttttcttataataagaaccggagggag 7537022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 8680642 - 8680688
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||    
T  8680642 atgaacctaaaaagtcaaatgtttcttataataaggaccggagggag 8680688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 17225205 - 17225159
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||    
T  17225205 atgaacctaaaaagtcaacttttgcttataataacgaccggagggag 17225159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 11 - 57
Target Start/End: Original strand, 24173513 - 24173559
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggacc 57  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||    
T  24173513 attattctataaacttaaaaagtcaactttttcttataataaggacc 24173559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 27600813 - 27600760
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    |||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||    
T  27600813 attattctatgaacttaaaaagtcaa-tttttcttataataaagaccggagggag 27600760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 32455232 - 32455286
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    |||||||||||||| ||||| || |||||||||||||||||||||| ||||||||    
T  32455232 attattctatgaacttaaaatgttaactttttcttataataaggactggagggag 32455286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 35204978 - 35204925
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||||||||||||||||||| ||||||||||||||||||||| || ||||||||    
T  35204978 attattctatgaacctaaaaa-tcaactttttcttataataagtacaggagggag 35204925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 35212181 - 35212234
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||||||||||||||||||| ||||||||||||||||||||| || ||||||||    
T  35212181 attattctatgaacctaaaaa-tcaactttttcttataataagtacaggagggag 35212234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 73877 - 73931
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||||| |||||||| ||||||||| | ||||||||||||| ||||||||||||    
T  73877 attattcaatgaacctgaaaagtcaattgtttcttataataaagaccggagggag 73931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 5355606 - 5355552
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    |||||||||||||||||||| || |||||||||||| ||||| || |||||||||    
T  5355606 attattctatgaacctaaaatgttaactttttcttagaataaagatcggagggag 5355552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 65
Target Start/End: Original strand, 5355660 - 5355698
Alignment:
Q  27 aaaaagtcaactttttcttataataaggaccggagggag 65  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  5355660 aaaaagtcaactgtttcttataataaggaccggagggag 5355698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 9630328 - 9630382
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||||||||||| ||||||| |||| ||||| ||||||||| ||||||||||||    
T  9630328 attattctatgaatctaaaaaatcaattttttgttataataaagaccggagggag 9630382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 29002835 - 29002889
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||||| || |||||||||| ||||||||||||||||||||||||  |||||||    
T  29002835 attattccataaacctaaaaaatcaactttttcttataataaggacatgagggag 29002889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 132 - 188
Target Start/End: Original strand, 1199519 - 1199576
Alignment:
Q  132 atgtagggatatttgtgtca-tttactaaatatataactttcttttctttcactttct 188  Q
    |||||||||||||| ||||| |||||||||||||||||| || || ||||||||||||    
T  1199519 atgtagggatatttatgtcaatttactaaatatataactatcattcctttcactttct 1199576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 7313928 - 7313973
Alignment:
Q  20 tgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    |||||||||||||||||||||| |||||||||  ||||||||||||    
T  7313928 tgaacctaaaaagtcaacttttgcttataatagtgaccggagggag 7313973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 13278993 - 13279030
Alignment:
Q  25 ctaaaaagtcaactttttcttataataaggaccggagg 62  Q
    |||||||||||||| |||||||||||||||||||||||    
T  13278993 ctaaaaagtcaactgtttcttataataaggaccggagg 13279030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 13932563 - 13932608
Alignment:
Q  20 tgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||||||||||||||| | |||||||||||||||||| |||||||    
T  13932563 tgaacctaaaaagtcaattatttcttataataaggaccagagggag 13932608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 30132883 - 30132843
Alignment:
Q  25 ctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||||||| || ||||||||||||||||||||||||||||    
T  30132883 ctaaaaagttaattttttcttataataaggaccggagggag 30132843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 73831 - 73785
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||| |||||||||||| | ||| ||||||||||||||||||||||    
T  73831 atgaatctaaaaagtcaattgttttttataataaggaccggagggag 73785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 138 - 184
Target Start/End: Complemental strand, 4904967 - 4904921
Alignment:
Q  138 ggatatttgtgtcatttactaaatatataactttcttttctttcact 184  Q
    |||||||| |||||||||||||||||| | |||||||| ||||||||    
T  4904967 ggatatttatgtcatttactaaatataaatctttctttcctttcact 4904921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 138 - 184
Target Start/End: Original strand, 7442423 - 7442469
Alignment:
Q  138 ggatatttgtgtcatttactaaatatataactttcttttctttcact 184  Q
    |||||||| |||||||||||||||||| | |||||||| ||||||||    
T  7442423 ggatatttatgtcatttactaaatataaatctttctttcctttcact 7442469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 13789825 - 13789879
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||||| ||||| || ||||||||||||||||||||||  || |||||||||||    
T  13789825 attattcaatgaatctgaaaagtcaactttttcttataaatagaaccggagggag 13789879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 13932508 - 13932462
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    |||||| ||||||||||| | |||||||||| |||||||||||||||    
T  13932508 atgaacataaaaagtcaattgtttcttataacaaggaccggagggag 13932462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 29031137 - 29031183
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||| ||||||||| |||||||||||||||  ||||||||||||||    
T  29031137 atgaatctaaaaagttaactttttcttataaataggaccggagggag 29031183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 38394483 - 38394429
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||||| ||||| |||||||||||| ||||||||||||  |||| |||||||||    
T  38394483 attattcaatgaatctaaaaagtcaattttttcttataaataggatcggagggag 38394429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 168 - 233
Target Start/End: Original strand, 4922078 - 4922145
Alignment:
Q  168 ctttcttttctttcactttctattcattttcattt--accaaacaaccaaaaaatcatttcactttcc 233  Q
    ||||||||| | ||| |||||||||| ||||| ||  |||||||||||| |||||||| |||||||||    
T  4922078 ctttcttttttctcattttctattcactttcacttcaaccaaacaaccacaaaatcatatcactttcc 4922145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 5e-23; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 122 - 232
Target Start/End: Original strand, 28132246 - 28132357
Alignment:
Q  122 ttttattctaatgtagggatatttgtgtcatttactaaa-tatataactttcttttctttcactttctattcattttcatttaccaaacaaccaaaaaat 220  Q
    |||||||| ||||||||||||| | |||||||||||||| ||| | ||||||||| || ||||||||| |||| |||||| ||||||||||||||| |||    
T  28132246 ttttattcaaatgtagggatatctatgtcatttactaaaatatgtcactttctttcctctcactttcttttcactttcatataccaaacaaccaaacaat 28132345  T
Q  221 catttcactttc 232  Q
    ||| ||||||||    
T  28132346 catctcactttc 28132357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 40198659 - 40198605
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40198659 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 40198605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 41487846 - 41487792
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41487846 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 41487792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 12806963 - 12806909
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  12806963 attattttatgaacctaaaaagtcaactttttcttataataaggaccggagggag 12806909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 47484114 - 47484168
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  47484114 attattctatgaacctaaaaagtcaacttttacttataataaggacaggagggag 47484168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 11 - 58
Target Start/End: Complemental strand, 24932438 - 24932391
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccg 58  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||    
T  24932438 attattctatgaacctaaaaagtcaattttttcttataataaggaccg 24932391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 18064777 - 18064723
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    |||||||||||||| |||||||| |||||||||||||| ||||||||||||||||    
T  18064777 attattctatgaacttaaaaagttaactttttcttatattaaggaccggagggag 18064723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 27320349 - 27320295
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  27320349 attattttatgaacttaaaaagtcaactttttcttataataaggacgggagggag 27320295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 58
Target Start/End: Original strand, 41395755 - 41395802
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccg 58  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  41395755 attattctatgaatctaaaaagtcaactttttcttataataagaaccg 41395802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 11 - 64
Target Start/End: Complemental strand, 24164571 - 24164518
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggaggga 64  Q
    ||||||||||||||| ||||| |||| | |||||||||||||||||||||||||    
T  24164571 attattctatgaaccaaaaaaatcaattgtttcttataataaggaccggaggga 24164518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 11 - 64
Target Start/End: Complemental strand, 45123300 - 45123247
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggaggga 64  Q
    |||||||||||||  ||||||||||||||||| ||||| |||||||||||||||    
T  45123300 attattctatgaatttaaaaagtcaacttttttttatagtaaggaccggaggga 45123247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 2523871 - 2523917
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||| |||||||||||||||||||||||||  ||||||||||||||    
T  2523871 atgaatctaaaaagtcaactttttcttataaataggaccggagggag 2523917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 10007677 - 10007723
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||| |||||||||||||||||||||||||  ||||||||||||||    
T  10007677 atgaatctaaaaagtcaactttttcttataaataggaccggagggag 10007723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 10674178 - 10674124
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||||| |||||||||||||||||| | ||| |||||||||| |||||||||||    
T  10674178 attattcaatgaacctaaaaagtcaaatgttttttataataagtaccggagggag 10674124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 22618264 - 22618306
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggag 61  Q
    |||||||||||||||||| | ||||||||||||||||||||||    
T  22618264 atgaacctaaaaagtcaattgtttcttataataaggaccggag 22618306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 24164617 - 24164663
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    |||||||||||||||||| | |||||||||||||||| |||||||||    
T  24164617 atgaacctaaaaagtcaaatgtttcttataataaggatcggagggag 24164663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 60
Target Start/End: Original strand, 37006549 - 37006599
Alignment:
Q  11 attattctatgaacctaaaaagtcaa-ctttttcttataataaggaccgga 60  Q
    |||||||||||||| |||||||||||  |||||||||||||||||||||||    
T  37006549 attattctatgaacttaaaaagtcaatttttttcttataataaggaccgga 37006599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 41088907 - 41088853
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||||| ||||| |||||||||||| | |||||| |||||||||||||||||||    
T  41088907 attattcaatgaatctaaaaagtcaattgtttcttgtaataaggaccggagggag 41088853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 45025649 - 45025599
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggag 61  Q
    ||||||||||||||| ||||| |||| | ||||||||||||||||||||||    
T  45025649 attattctatgaaccaaaaaaatcaattgtttcttataataaggaccggag 45025599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 3633238 - 3633197
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccgga 60  Q
    |||||||||||||||||| | |||||||||||||||||||||    
T  3633238 atgaacctaaaaagtcaaatgtttcttataataaggaccgga 3633197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 41088956 - 41088996
Alignment:
Q  22 aacctaaaaagtcaactttttcttataataaggaccggagg 62  Q
    ||||||||||||||| | |||||||||||||||||||||||    
T  41088956 aacctaaaaagtcaattgtttcttataataaggaccggagg 41088996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 62
Target Start/End: Complemental strand, 29559484 - 29559441
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggagg 62  Q
    |||||||||||||||||| | |||||||||||||||| ||||||    
T  29559484 atgaacctaaaaagtcaattgtttcttataataaggatcggagg 29559441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 193
Target Start/End: Original strand, 37932109 - 37932180
Alignment:
Q  122 ttttattctaatgtagggatatttgtgtcatttactaaatatataactttcttttctttcactttctattca 193  Q
    |||||||||||||||  ||||||| ||| |||||| |||||||| ||||||||| || |||| ||| |||||    
T  37932109 ttttattctaatgtaaagatatttatgttatttacgaaatatatcactttctttcctctcacattccattca 37932180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 42
Target Start/End: Original strand, 47280266 - 47280297
Alignment:
Q  11 attattctatgaacctaaaaagtcaacttttt 42  Q
    ||||||||||||||||||||||||||||||||    
T  47280266 attattctatgaacctaaaaagtcaacttttt 47280297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 3633292 - 3633330
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggacc 57  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  3633292 atgaacctaaaaagtcaaatatttcttataataaggacc 3633330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 138 - 184
Target Start/End: Complemental strand, 5216550 - 5216504
Alignment:
Q  138 ggatatttgtgtcatttactaaatatataactttcttttctttcact 184  Q
    |||||||| |||||||||||||||||| | |||||||| ||||||||    
T  5216550 ggatatttatgtcatttactaaatataaatctttctttcctttcact 5216504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 7456466 - 7456424
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggag 61  Q
    ||||| |||||||||||| | ||||||||||||||||||||||    
T  7456466 atgaatctaaaaagtcaaatatttcttataataaggaccggag 7456424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 13807289 - 13807243
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||| |||||||||||||||||||||||||  | ||||||||||||    
T  13807289 atgaatctaaaaagtcaactttttcttataaataagaccggagggag 13807243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 141 - 183
Target Start/End: Original strand, 30514636 - 30514678
Alignment:
Q  141 tatttgtgtcatttactaaatatataactttcttttctttcac 183  Q
    ||||| |||||||||||||||||||| |||||||| |||||||    
T  30514636 tatttttgtcatttactaaatatatatctttctttcctttcac 30514678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 34840657 - 34840611
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||| ||||||||| ||||||| |||||||||| ||||||||||||    
T  34840657 atgaatctaaaaagtgaacttttgcttataataatgaccggagggag 34840611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 40234813 - 40234767
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||| |||||||||||| | |||||||||||||| |||||||||||    
T  40234813 atgaatctaaaaagtcaattgtttcttataataagaaccggagggag 40234767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 41487892 - 41487938
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||||| ||||| |||| | ||||||||||||||||||||||||||    
T  41487892 atgaaccaaaaaaatcaattgtttcttataataaggaccggagggag 41487938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 47612345 - 47612291
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||||| |||||||||||||||||  | || || ||||||||||||||||||||    
T  47612345 attattcaatgaacctaaaaagtcatttgttgctaataataaggaccggagggag 47612291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 47612391 - 47612437
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    |||||||||||||||||| |  | |||||||||||||||||||||||    
T  47612391 atgaacctaaaaagtcaattgctgcttataataaggaccggagggag 47612437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 10674224 - 10674269
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggaggga 64  Q
    ||||| |||||||||||| | |||||||||||||||| ||||||||    
T  10674224 atgaatctaaaaagtcaattgtttcttataataaggatcggaggga 10674269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 13860318 - 13860363
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggaggga 64  Q
    ||||| |||||||||||| | |||||||||||||||| ||||||||    
T  13860318 atgaatctaaaaagtcaattgtttcttataataaggatcggaggga 13860363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 5347764 - 5347724
Alignment:
Q  25 ctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    |||||||||||||||| ||||||||  ||||||||||||||    
T  5347764 ctaaaaagtcaactttctcttataaataggaccggagggag 5347724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 161 - 233
Target Start/End: Original strand, 7345115 - 7345190
Alignment:
Q  161 tatataactttcttttctttcactttctattcattttcatt--taccaaacaaccaaaa-aatcatttcactttcc 233  Q
    |||||| |||||||| ||| ||||||||  |||||||||||  |||||||||||||||| |||||| | |||||||    
T  7345115 tatatatctttctttccttccactttcttatcattttcatttataccaaacaaccaaaataatcatcttactttcc 7345190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 160 - 233
Target Start/End: Original strand, 33698507 - 33698582
Alignment:
Q  160 atatataactttcttttctttcactttctattcattttcattta--ccaaacaaccaaaaaatcatttcactttcc 233  Q
    ||||||| |||||||| |||||| |||||  ||| |||||||||  ||||||||| |||| ||||| |||||||||    
T  33698507 atatatatctttctttcctttcaatttcttctcactttcatttataccaaacaactaaaatatcatctcactttcc 33698582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 33901091 - 33901039
Alignment:
Q  13 tattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||||||||| | ||||| |||| | ||||||||||||||||| ||||||||    
T  33901091 tattctatgaatcaaaaaaatcaattgtttcttataataaggacaggagggag 33901039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 141 - 217
Target Start/End: Complemental strand, 39878730 - 39878651
Alignment:
Q  141 tatttgtgtcatttactaaatatataactttcttttctttcactttctatt-cattttcatt--taccaaacaaccaaaa 217  Q
    ||||| ||||| ||| |||||||||| |||||||| |||  |||||||||| ||||||| ||  ||||||||||||||||    
T  39878730 tatttatgtcaattaataaatatatatctttctttccttcaactttctattccattttcttttataccaaacaaccaaaa 39878651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 2e-22; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 13831968 - 13832022
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13831968 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 13832022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 34604835 - 34604782
Alignment:
Q  12 ttattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34604835 ttattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 34604782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 45372760 - 45372706
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  45372760 attattctatgaacctaaaaagtcaactttttcttatattaaggaccggagggag 45372706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 7548590 - 7548645
Alignment:
Q  11 attattctatgaacctaaaaag-tcaactttttcttataataaggaccggagggag 65  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  7548590 attattctatgaacctaaaaaaatcaactttttcttataataaggaccggagggag 7548645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 34745312 - 34745258
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||||||||||||| |||||||||| | ||||||||||||||||||||||||||    
T  34745312 attattctatgaaccaaaaaagtcaattgtttcttataataaggaccggagggag 34745258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 43292623 - 43292569
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||||||||||||| |||||||||| | ||||||||||||||||||||||||||    
T  43292623 attattctatgaaccaaaaaagtcaattgtttcttataataaggaccggagggag 43292569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 44579986 - 44580040
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| | ||||||    
T  44579986 attattctatgaacttaaaaagtcaactttttcttataataaggactgaagggag 44580040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 29690491 - 29690437
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    |||||||||||||||||||||||||  |||||||||||||||||||  |||||||    
T  29690491 attattctatgaacctaaaaagtcagttttttcttataataaggactagagggag 29690437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 35583938 - 35583884
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    |||||||||||||||||||| ||||  ||||||||||||||||||| ||||||||    
T  35583938 attattctatgaacctaaaaggtcatatttttcttataataaggactggagggag 35583884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 43932096 - 43932050
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||    
T  43932096 atgaacctaaaaagtcaattgtttcttataataaggaccggagggag 43932050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 43932142 - 43932196
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||||| ||||| |||||||||||| | ||||||||||||||||||||||||||    
T  43932142 attattcaatgaatctaaaaagtcaattgtttcttataataaggaccggagggag 43932196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 219
Target Start/End: Complemental strand, 2086653 - 2086554
Alignment:
Q  122 ttttattctaatgtagggatatttgtgtcatttactaaatatataactttcttttctttcactttctattcattttca--tttaccaaacaaccaaaaaa 219  Q
    ||||||||||||||| |||||||| |||||||||  |||||||| | ||||||| || | || ||| ||||| |||||  | |||||||||| |||||||    
T  2086653 ttttattctaatgtaaggatatttatgtcatttatgaaatatatcattttctttcctcttacattccattcactttcacttctaccaaacaatcaaaaaa 2086554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 34604882 - 34604928
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||||| ||||| |||| | ||||||||||||||||||||||||||    
T  34604882 atgaaccaaaaaaatcaattgtttcttataataaggaccggagggag 34604928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 35583984 - 35584030
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||||| ||||||| || | ||||||||||||||||||||||||||    
T  35583984 atgaaccaaaaaagttaattgtttcttataataaggaccggagggag 35584030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 43292669 - 43292707
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggacc 57  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  43292669 atgaacctaaaaagtcaaatgtttcttataataaggacc 43292707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 43409881 - 43409835
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    |||||||||||||||||| |  | |||||||||||||||||||||||    
T  43409881 atgaacctaaaaagtcaattgctgcttataataaggaccggagggag 43409835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 233
Target Start/End: Complemental strand, 17785297 - 17785209
Alignment:
Q  147 tgtcatttactaaatatataactttcttttctttcactttctattcattttcatt--taccaaacaaccaaaaaatcatttcactttcc 233  Q
    ||||||||  |||||| ||| | |||||| || || |||||| |||||||||| |  ||||||||||||| |||||||| |||||||||    
T  17785297 tgtcattttttaaatacatatcattctttcctctccctttcttttcattttcactcctaccaaacaaccataaaatcatatcactttcc 17785209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 138 - 186
Target Start/End: Original strand, 9880770 - 9880818
Alignment:
Q  138 ggatatttgtgtcatttactaaatatataactttcttttctttcacttt 186  Q
    |||||||| |||||||||||| ||||| | |||| ||||||||||||||    
T  9880770 ggatatttttgtcatttactagatatacatctttattttctttcacttt 9880818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 2e-22; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 54864119 - 54864065
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54864119 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 54864065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 8347586 - 8347639
Alignment:
Q  12 ttattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8347586 ttattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 8347639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 35877369 - 35877315
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  35877369 attattctatgaatctaaaaagtcaactttttcttataataaggaccggagggag 35877315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 37895348 - 37895402
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  37895348 attattctatgaatctaaaaagtcaactttttcttataataaggaccggagggag 37895402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 43141859 - 43141910
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagg 62  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  43141859 attattctatgaacctaaaaagtcaactttttcttataataaagaccggagg 43141910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 36196458 - 36196512
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||    
T  36196458 attattctatgaatctaaaaaatcaattttttcttataataaggaccggagggag 36196512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 32193568 - 32193619
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagg 62  Q
    |||||||||||||| |||||| ||||| ||||||||||||||||||||||||    
T  32193568 attattctatgaacttaaaaaatcaacgttttcttataataaggaccggagg 32193619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 43556784 - 43556839
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttt-tcttataataaggaccggagggag 65  Q
    ||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||    
T  43556784 attattctatgaacctaaaaaatcaatttttttcttataataaggaccggagggag 43556839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 50511338 - 50511389
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagg 62  Q
    |||||||||| || ||||| ||||||||||||||||||||||||||||||||    
T  50511338 attattctataaatctaaagagtcaactttttcttataataaggaccggagg 50511389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 4418198 - 4418244
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||    
T  4418198 atgaacctaaaaaatcaattttttcttataataaggaccggagggag 4418244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 29686447 - 29686401
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||    
T  29686447 atgaacctaaaaagtcaaatgtttcttataataaggaccggagggag 29686401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 33622973 - 33623027
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    |||||||||||||| ||||||||||| |||||||||||||| ||| |||||||||    
T  33622973 attattctatgaacgtaaaaagtcaattttttcttataatagggatcggagggag 33623027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 52136746 - 52136700
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||    
T  52136746 atgaacctaaaaagttaattttttcttataataaggaccggagggag 52136700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 25756758 - 25756713
Alignment:
Q  20 tgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  25756758 tgaacctaaaaagtcaattatttcttataataaggaccggagggag 25756713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 11 - 60
Target Start/End: Original strand, 50511520 - 50511569
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccgga 60  Q
    ||||||||||||||||||| |||||||||||||||||||| | |||||||    
T  50511520 attattctatgaacctaaagagtcaactttttcttataatgaagaccgga 50511569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 61
Target Start/End: Complemental strand, 54673364 - 54673315
Alignment:
Q  12 ttattctatgaacctaaaaagtcaactttttcttataataaggaccggag 61  Q
    |||||| |||||||||||||||||| | ||||||||||||||||||||||    
T  54673364 ttattcaatgaacctaaaaagtcaaatgtttcttataataaggaccggag 54673315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 1100943 - 1100899
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggaggg 63  Q
    |||||||||||||||||| | ||||||||||||||||||||||||    
T  1100943 atgaacctaaaaagtcaaatgtttcttataataaggaccggaggg 1100899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 19350705 - 19350753
Alignment:
Q  13 tattctatgaacctaaaaagtcaactttttcttataataaggaccggag 61  Q
    |||||||| ||||||||||||||||||||| || |||||||||||||||    
T  19350705 tattctataaacctaaaaagtcaacttttttttttaataaggaccggag 19350753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 52966488 - 52966536
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccgg 59  Q
    ||||||||||||||| |||||||||| | ||||||||||||||||||||    
T  52966488 attattctatgaaccaaaaaagtcaattgtttcttataataaggaccgg 52966536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 26 - 65
Target Start/End: Original strand, 17316588 - 17316627
Alignment:
Q  26 taaaaagtcaactttttcttataataaggaccggagggag 65  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  17316588 taaaaagttaactttttcttataataaggaccggagggag 17316627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 35929065 - 35929014
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagg 62  Q
    |||||||||| |||||||||| |||||||||||||||||||| ||| |||||    
T  35929065 attattctataaacctaaaaaatcaactttttcttataataaagacgggagg 35929014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 7086232 - 7086278
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    |||||||||||||||||| | ||||||||||||||||||||| ||||    
T  7086232 atgaacctaaaaagtcaaatgtttcttataataaggaccggaaggag 7086278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 25756813 - 25756859
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    |||||| ||||||||||| | ||||||||||||||||||||||||||    
T  25756813 atgaacataaaaagtcaattgtttcttataataaggaccggagggag 25756859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 32193522 - 32193476
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||||| |||||||||| | ||||||||||||||||||||||||||    
T  32193522 atgaaccaaaaaagtcaattgtttcttataataaggaccggagggag 32193476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 37895302 - 37895256
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||||| ||||| |||||| ||||||||||||||||||||||||||    
T  37895302 atgaaccaaaaaaatcaactgtttcttataataaggaccggagggag 37895256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 53225737 - 53225791
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||||| ||||| |||||||||||| ||||||||||||  ||||||||||||||    
T  53225737 attattcaatgaatctaaaaagtcaattttttcttataaataggaccggagggag 53225791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 4418152 - 4418100
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggaggg 63  Q
    ||||||||||||||  ||||| |||| | ||||||||||||||||||||||||    
T  4418152 attattctatgaactaaaaaaatcaattgtttcttataataaggaccggaggg 4418100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 169 - 233
Target Start/End: Complemental strand, 29696739 - 29696673
Alignment:
Q  169 tttcttttctttcactttctattcattttcattt--accaaacaaccaaaaaatcatttcactttcc 233  Q
    ||||||| || |||||||||||||| ||||| ||  |||||||||||| |||||||| |||||||||    
T  29696739 tttctttcctctcactttctattcactttcacttcaaccaaacaaccataaaatcatatcactttcc 29696673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 231
Target Start/End: Original strand, 42150197 - 42150302
Alignment:
Q  125 tattctaatgtagggatatttgtgtcatttactaaatatataactttcttttctttcactttctattcattttcatt--taccaaacaaccaaaaaatca 222  Q
    |||| ||||||||| |||||  ||||||||||||||||    ||| ||||| |||||| ||||| | || |||||||  ||||||||||| |||||||||    
T  42150197 tattttaatgtaggtatattcatgtcatttactaaata---cactatctttcctttcaatttctttccactttcattcataccaaacaactaaaaaatca 42150293  T
Q  223 tttcacttt 231  Q
    | |||||||    
T  42150294 tctcacttt 42150302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 3094363 - 3094409
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    |||||||||||||||||||||||  ||||||||  ||||||||||||    
T  3094363 atgaacctaaaaagtcaacttttggttataatagtgaccggagggag 3094409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 9894672 - 9894630
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggag 61  Q
    ||||| |||||||||||||||||||||||||  ||||||||||    
T  9894672 atgaatctaaaaagtcaactttttcttataaataggaccggag 9894630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 24100814 - 24100760
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||||| ||||| ||||||||| || | |||||||||||||||| |||||||||    
T  24100814 attattcaatgaatctaaaaagttaattatttcttataataaggatcggagggag 24100760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 64
Target Start/End: Original strand, 28020585 - 28020623
Alignment:
Q  26 taaaaagtcaactttttcttataataaggaccggaggga 64  Q
    |||||||||||||||||||||||| || |||||||||||    
T  28020585 taaaaagtcaactttttcttataaaaatgaccggaggga 28020623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 31853168 - 31853206
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggacc 57  Q
    |||||||||||||||||| ||||||||||||||| ||||    
T  31853168 atgaacctaaaaagtcaaatttttcttataataaagacc 31853206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 33622927 - 33622881
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||||| ||||||| || | ||||||||||||||||||||||||||    
T  33622927 atgaaccaaaaaagttaattgtttcttataataaggaccggagggag 33622881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 36196412 - 36196366
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||||| ||||| |||| | ||||||||||||||||||||||||||    
T  36196412 atgaaccaaaaaaatcaattgtttcttataataaggaccggagggag 36196366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 42160028 - 42159978
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggag 61  Q
    ||||||||||||||  ||||| |||| | ||||||||||||||||||||||    
T  42160028 attattctatgaacaaaaaaaatcaattatttcttataataaggaccggag 42159978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 44111846 - 44111892
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||| |||||||||||||||||||||||||  | ||||||||||||    
T  44111846 atgaatctaaaaagtcaactttttcttataaataagaccggagggag 44111892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 48361099 - 48361053
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||| |||||||||||| ||||||||||||  ||||||||||||||    
T  48361099 atgaatctaaaaagtcaaatttttcttataaataggaccggagggag 48361053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 56491119 - 56491073
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    |||||||||||||||||| |  | |||||||||||||||||||||||    
T  56491119 atgaacctaaaaagtcaattgctgcttataataaggaccggagggag 56491073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 27587287 - 27587250
Alignment:
Q  25 ctaaaaagtcaactttttcttataataaggaccggagg 62  Q
    |||||||||||| | |||||||||||||||||||||||    
T  27587287 ctaaaaagtcaattgtttcttataataaggaccggagg 27587250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 43141813 - 43141768
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggaggga 64  Q
    ||||||| ||||||| || | |||||||||||||||||||||||||    
T  43141813 atgaaccaaaaaagttaattgtttcttataataaggaccggaggga 43141768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 52
Target Start/End: Original strand, 52278060 - 52278101
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataa 52  Q
    |||||||||| || |||||||||||| |||||||||||||||    
T  52278060 attattctataaatctaaaaagtcaattttttcttataataa 52278101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 54673411 - 54673448
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggac 56  Q
    |||||||||||||||||| | |||||||||||||||||    
T  54673411 atgaacctaaaaagtcaattgtttcttataataaggac 54673448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 54864165 - 54864210
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggaggga 64  Q
    ||||||| ||||||| || | |||||||||||||||||||||||||    
T  54864165 atgaaccaaaaaagttaattgtttcttataataaggaccggaggga 54864210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 19150699 - 19150659
Alignment:
Q  25 ctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    |||||||||||||||||||||||||  ||||||| ||||||    
T  19150699 ctaaaaagtcaactttttcttataaataggaccgtagggag 19150659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 28815880 - 28815912
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataata 51  Q
    ||||||||||||||||||||||| |||||||||    
T  28815880 atgaacctaaaaagtcaacttttgcttataata 28815912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 43020803 - 43020759
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggaggg 63  Q
    ||||| ||||||||| |||||||||||||||  ||||||||||||    
T  43020803 atgaatctaaaaagttaactttttcttataaataggaccggaggg 43020759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 148 - 233
Target Start/End: Complemental strand, 45043475 - 45043388
Alignment:
Q  148 gtcatttactaaatatataactttcttttctttcactttctattcattttcatt--taccaaacaaccaaaaaatcatttcactttcc 233  Q
    ||||||| |||||| || | |||||||| ||||||||||||  ||| |||||||  | ||||||||| ||| |||||| |||||||||    
T  45043475 gtcatttgctaaatttagatctttctttcctttcactttcttatcactttcattcattccaaacaactaaacaatcatctcactttcc 45043388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 63
Target Start/End: Complemental strand, 50511427 - 50511391
Alignment:
Q  27 aaaaagtcaactttttcttataataaggaccggaggg 63  Q
    |||||||||| | ||||||||||||||||||||||||    
T  50511427 aaaaagtcaagtgtttcttataataaggaccggaggg 50511391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 148 - 233
Target Start/End: Complemental strand, 54042069 - 54041983
Alignment:
Q  148 gtcatttactaaatatataactttcttttctttcactttctattcattttcatt--taccaaacaaccaaaaaatcatttcactttcc 233  Q
    ||||||| |||||| |||| |||||||| ||||||||||||  ||| |||||||  | ||||||||| ||| |||||| |||||||||    
T  54042069 gtcatttgctaaatttatatctttctttcctttcactttcttatca-tttcattcattccaaacaactaaacaatcatctcactttcc 54041983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 2e-22; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 45113827 - 45113881
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45113827 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 45113881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 27302172 - 27302223
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagg 62  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  27302172 attattctatgaacctaaaaagtcaactttttcttataataaagaccggagg 27302223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 11 - 60
Target Start/End: Complemental strand, 21944344 - 21944295
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccgga 60  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  21944344 attattctatgaacctaaaaagtcaattttttcttataataaggaccgga 21944295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 50660031 - 50660081
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggag 61  Q
    |||||||||| || |||||||||||||||||||||||||||||||||||||    
T  50660031 attattctataaatctaaaaagtcaactttttcttataataaggaccggag 50660081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 53703785 - 53703731
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||||||||||||| |||||||||| | ||||||||||||||||||||||||||    
T  53703785 attattctatgaaccaaaaaagtcaattgtttcttataataaggaccggagggag 53703731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 2544491 - 2544438
Alignment:
Q  12 ttattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    |||||| |||||||||||||||||| | ||||||||||||||||||||||||||    
T  2544491 ttattcaatgaacctaaaaagtcaattgtttcttataataaggaccggagggag 2544438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 11 - 55
Target Start/End: Complemental strand, 43901636 - 43901592
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataagga 55  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  43901636 attattctatgaacctaaaaagtcaactttttcatataataagga 43901592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 19227401 - 19227455
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||||||||||||| ||||| |||| | ||||||||||||||||||||||||||    
T  19227401 attattctatgaaccaaaaaaatcaattgtttcttataataaggaccggagggag 19227455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 31376222 - 31376176
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||    
T  31376222 atgaacctaaaaagtcaaatgtttcttataataaggaccggagggag 31376176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 31376268 - 31376322
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||||||||||||| |||||||||| | |||||| |||||||||||||||||||    
T  31376268 attattctatgaaccaaaaaagtcaattgtttcttgtaataaggaccggagggag 31376322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 39617004 - 39617058
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||||||||||||| |||||||||| | |||||| |||||||||||||||||||    
T  39617004 attattctatgaaccaaaaaagtcaattgtttcttgtaataaggaccggagggag 39617058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 123 - 199
Target Start/End: Complemental strand, 25591031 - 25590955
Alignment:
Q  123 tttattctaatgtagggatatttgtgtcatttactaaatatataactttcttttctttcactttctattcattttca 199  Q
    |||||||||||||| |||||||| |||||||||| |||||||| |||||| || || |||| ||| ||||| |||||    
T  25591031 tttattctaatgtaaggatatttatgtcatttacaaaatatatcactttccttcctctcacattccattcactttca 25590955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 53703831 - 53703878
Alignment:
Q  19 atgaacctaaaaagtcaactttt-tcttataataaggaccggagggag 65  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||||    
T  53703831 atgaacctaaaaggtcaacttttttcttataataaggaccggagggag 53703878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 21662933 - 21662887
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||| |||||||||||||||||||||||||  ||||||||||||||    
T  21662933 atgaatctaaaaagtcaactttttcttataaataggaccggagggag 21662887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 39616958 - 39616912
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    |||||||| ||||||||| | ||||||||||||||||||||||||||    
T  39616958 atgaaccttaaaagtcaaatgtttcttataataaggaccggagggag 39616912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 46220421 - 46220367
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    |||||||||||||  |||||| |||| ||||||||||||||||||||||| ||||    
T  46220421 attattctatgaatataaaaaatcaattttttcttataataaggaccggatggag 46220367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 53284371 - 53284325
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggacc 57  Q
    |||||| |||||| ||||||| |||||||||||||||||||||||||    
T  53284371 attattttatgaaactaaaaaatcaactttttcttataataaggacc 53284325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 53442000 - 53442054
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||||| |||||  ||||||||||||||||||||||||  ||||||||||||||    
T  53442000 attattcaatgaatttaaaaagtcaactttttcttataaataggaccggagggag 53442054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 132 - 188
Target Start/End: Original strand, 2032308 - 2032365
Alignment:
Q  132 atgtagggatatttgtgtca-tttactaaatatataactttcttttctttcactttct 188  Q
    |||||||||||||| ||||| ||||||||  |||||||| ||||||||||||||||||    
T  2032308 atgtagggatatttatgtcaatttactaacaatataactatcttttctttcactttct 2032365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 55
Target Start/End: Complemental strand, 36191529 - 36191485
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataagga 55  Q
    ||||||||||||||| |||||||||| | ||||||||||||||||    
T  36191529 attattctatgaaccaaaaaagtcaattgtttcttataataagga 36191485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 51516999 - 51516959
Alignment:
Q  25 ctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    |||||||||||||||||||||||||  ||||||||||||||    
T  51516999 ctaaaaagtcaactttttcttataaataggaccggagggag 51516959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 16123811 - 16123761
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagg 62  Q
    |||||| ||| ||||||||| ||||| |||||||||||||||||||||||||    
T  16123811 attattttataaacctaaaa-gtcaattttttcttataataaggaccggagg 16123761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 61
Target Start/End: Complemental strand, 48643648 - 48643609
Alignment:
Q  22 aacctaaaaagtcaactttttcttataataaggaccggag 61  Q
    ||||||||||||||| | ||||||||||||||||||||||    
T  48643648 aacctaaaaagtcaattgtttcttataataaggaccggag 48643609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 2544560 - 2544606
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||| |||||||||||| | |||||| |||||||||||||||||||    
T  2544560 atgaatctaaaaagtcaattgtttcttgtaataaggaccggagggag 2544606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 8769235 - 8769280
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    |||||| |||||||| ||||||| |||||||||||||||||||||||    
T  8769235 atgaacttaaaaagttaactttt-cttataataaggaccggagggag 8769280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 24489406 - 24489459
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    |||||||||||||  |||||| |||||||| |||||||||||||| |||||||||    
T  24489406 attattctatgaatttaaaaa-tcaactttgtcttataataaggatcggagggag 24489459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 28406560 - 28406614
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||||| |||||||||||||||||| | |||||| |||  ||||||||||||||    
T  28406560 attattcaatgaacctaaaaagtcaattgtttcttgtaaataggaccggagggag 28406614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 141 - 232
Target Start/End: Original strand, 33863376 - 33863469
Alignment:
Q  141 tatttgtgtcatttactaaatatataactttcttttctttcactttctattcattttcatt--taccaaacaaccaaaaaatcatttcactttc 232  Q
    ||||| ||||||||  ||||| |||| |||| ||| |||||||||||| |||| |||||||  || |||||||| ||| |||||| ||||||||    
T  33863376 tatttatgtcatttcataaatgtatatctttatttcctttcactttcttttcactttcattcatatcaaacaactaaacaatcatctcactttc 33863469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 233
Target Start/End: Complemental strand, 46970194 - 46970129
Alignment:
Q  170 ttcttttctttcactttctattcattttcatt--taccaaacaaccaaaaaatcatttcactttcc 233  Q
    |||||| |||||||||||| |||||| ||| |  |||||||||||||||||||||| | |||||||    
T  46970194 ttctttcctttcactttcttttcattatcactcataccaaacaaccaaaaaatcatcttactttcc 46970129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 48643697 - 48643751
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||||| ||||| |||||||||||| | |||||| |||||||||| ||||||||    
T  48643697 attattcaatgaatctaaaaagtcaattgtttcttgtaataaggactggagggag 48643751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 158 - 233
Target Start/End: Original strand, 50406661 - 50406738
Alignment:
Q  158 aaatatataactttcttttctttcactttctattcattttcattta--ccaaacaaccaaaaaatcatttcactttcc 233  Q
    ||||||||  ||||||||||| ||| |||||||||  ||||| |||  ||||||||||| |||||||| |||||||||    
T  50406661 aaatatatctctttcttttctctcattttctattctctttcacttaaaccaaacaaccacaaaatcatatcactttcc 50406738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 42896196 - 42896143
Alignment:
Q  12 ttattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    |||||| ||||||||||||||| || |  |||||||||||| ||||||||||||    
T  42896196 ttattcaatgaacctaaaaagtgaattgcttcttataataaagaccggagggag 42896143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 122 - 233
Target Start/End: Complemental strand, 49952483 - 49952369
Alignment:
Q  122 ttttattctaatgtagggatatttgtgtcatttactaaatatataact--ttcttttctttcactttctattcattttca--tttaccaaacaaccaaaa 217  Q
    |||||||| |||||||||| || | |||||||||||||| ||||| ||  ||||||  | ||||||||| |||| |||||  | |||||||||||||||     
T  49952483 ttttattcaaatgtagggacatctatgtcatttactaaa-atatatctaattctttcatctcactttcttttcactttcacttataccaaacaaccaaac 49952385  T
Q  218 aatcatttcactttcc 233  Q
    |||||| |||| ||||    
T  49952384 aatcatctcacattcc 49952369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 4190725 - 4190757
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataata 51  Q
    ||||||||||||||||||||||| |||||||||    
T  4190725 atgaacctaaaaagtcaacttttgcttataata 4190757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 147 - 232
Target Start/End: Complemental strand, 41054376 - 41054289
Alignment:
Q  147 tgtcatttactaaatatataactttcttttctttcactttctattcattttcatt--taccaaacaaccaaaaaatcatttcactttc 232  Q
    ||||||| ||||||||||   |||||||| ||||||||||||| ||| |||||||  |||||||||   ||| |||||| ||||||||    
T  41054376 tgtcattcactaaatataactctttctttcctttcactttctactcactttcattcataccaaacacttaaacaatcatctcactttc 41054289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 2e-22; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 15239785 - 15239839
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15239785 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 15239839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 28143838 - 28143892
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28143838 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 28143892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 36103486 - 36103540
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  36103486 attattctatgaacctaaaaaatcaactttttcttataataaggaccggagggag 36103540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 40534607 - 40534660
Alignment:
Q  12 ttattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  40534607 ttattctatgaacctaaaaagtcaactttatcttataataaggaccggagggag 40534660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 45076397 - 45076343
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  45076397 attattctatgaacctaaaaaatcaattttttcttataataaggaccggagggag 45076343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 132 - 188
Target Start/End: Complemental strand, 6150260 - 6150203
Alignment:
Q  132 atgtagggatatttgtgtca-tttactaaatatataactttcttttctttcactttct 188  Q
    |||||||||||||| ||||| |||||||||||||||||| ||||| ||||||||||||    
T  6150260 atgtagggatatttatgtcaatttactaaatatataactatctttcctttcactttct 6150203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 23464589 - 23464638
Alignment:
Q  11 attattctatgaacctaaaa-agtcaactttttcttataataaggaccgg 59  Q
    |||||||||||||||||||| | |||||||||||||||||||||||||||    
T  23464589 attattctatgaacctaaaataatcaactttttcttataataaggaccgg 23464638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 11 - 52
Target Start/End: Complemental strand, 27306766 - 27306725
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataa 52  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  27306766 attattcaatgaacctaaaaagtcaactttttcttataataa 27306725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 12873770 - 12873724
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||| ||||||||||||||||||||||||| ||||| |||||||||    
T  12873770 atgaatctaaaaagtcaactttttcttataaaaaggatcggagggag 12873724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 25795331 - 25795385
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||||| ||||| |||||||||||| | |||||| |||||||||||||||||||    
T  25795331 attattcaatgaatctaaaaagtcaattgtttcttgtaataaggaccggagggag 25795385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 25795282 - 25795242
Alignment:
Q  22 aacctaaaaagtcaactttttcttataataaggaccggagg 62  Q
    ||||||||||||||| | |||||||||||||||||||||||    
T  25795282 aacctaaaaagtcaattgtttcttataataaggaccggagg 25795242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 62
Target Start/End: Original strand, 6971671 - 6971714
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggagg 62  Q
    |||||||||||||||||| | ||||||||||||||||| |||||    
T  6971671 atgaacctaaaaagtcaaatgtttcttataataaggacaggagg 6971714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 29866175 - 29866229
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||||| ||| |||||||||||||||||| |||| |||  ||||||||||||||    
T  29866175 attattcaatgtacctaaaaagtcaactttatcttgtaaataggaccggagggag 29866229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 41153212 - 41153258
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||| |||||||||||||||||||||||||  |||| |||||||||    
T  41153212 atgaatctaaaaagtcaactttttcttataaataggatcggagggag 41153258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 203
Target Start/End: Original strand, 37660668 - 37660713
Alignment:
Q  158 aaatatataactttcttttctttcactttctattcattttcattta 203  Q
    ||||||||| |||||||| |||||||||||| |||| |||||||||    
T  37660668 aaatatatatctttctttcctttcactttcttttcactttcattta 37660713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 138 - 182
Target Start/End: Original strand, 13285665 - 13285709
Alignment:
Q  138 ggatatttgtgtcatttactaaatatataactttcttttctttca 182  Q
    |||||||| |||||||||||||||||| | |||||||| ||||||    
T  13285665 ggatatttatgtcatttactaaatataaatctttctttcctttca 13285709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 13775818 - 13775858
Alignment:
Q  25 ctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    |||||||||||||||| ||||||||  ||||||||||||||    
T  13775818 ctaaaaagtcaactttctcttataaataggaccggagggag 13775858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 44283626 - 44283670
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataagga 55  Q
    ||||||| ||||| |||||||||||| | ||||||||||||||||    
T  44283626 attattcaatgaatctaaaaagtcaattatttcttataataagga 44283670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 7e-16; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 122 - 233
Target Start/End: Complemental strand, 47630699 - 47630585
Alignment:
Q  122 ttttattctaatgtagggatatttgtgtcatttac-taaatatataactttcttttctttcactttctattcattttca--tttaccaaacaaccaaaaa 218  Q
    |||||||| ||||||||||||||| ||||||||||  |||||||| | |||||||||| | ||||||| ||||||||||  | ||||||| ||| ||| |    
T  47630699 ttttattcaaatgtagggatatttatgtcatttacaaaaatatatcattttcttttctctaactttcttttcattttcacttataccaaataactaaaca 47630600  T
Q  219 atcatttcactttcc 233  Q
    ||||| |||||||||    
T  47630599 atcatctcactttcc 47630585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 13320396 - 13320450
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||    
T  13320396 attattctatgaatctaaaaagtcaactttttcttataataaagactggagggag 13320450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 52279327 - 52279381
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    |||||| |||||| ||||||||||||||||||||||||||||||| |||||||||    
T  52279327 attattatatgaatctaaaaagtcaactttttcttataataaggatcggagggag 52279381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 25238666 - 25238720
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    |||||||||||||||||||||||||| | ||| ||||||||||||| ||||||||    
T  25238666 attattctatgaacctaaaaagtcaattgttttttataataaggacaggagggag 25238720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 48565628 - 48565674
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||    
T  48565628 atgaacttaaaaagttaactttttcttataataaggaccggagggag 48565674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 51590485 - 51590431
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||||||||||||| |||||||||| | ||| ||||||||||||||||||||||    
T  51590485 attattctatgaaccaaaaaagtcaattgttttttataataaggaccggagggag 51590431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 51590531 - 51590577
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||| |||||| ||||||||||||||||||||||||||||||||||    
T  51590531 atgaatctaaaaggtcaactttttcttataataaggaccggagggag 51590577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 45
Target Start/End: Complemental strand, 32837691 - 32837657
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttctt 45  Q
    |||||||||||||||||||||||||||||||||||    
T  32837691 attattctatgaacctaaaaagtcaactttttctt 32837657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 45977187 - 45977241
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    |||||||||| ||| |||||||||||||||||||||||||||  |||| ||||||    
T  45977187 attattctataaacgtaaaaagtcaactttttcttataataaaaaccgaagggag 45977241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 65
Target Start/End: Complemental strand, 26924253 - 26924214
Alignment:
Q  26 taaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||||||||||||||||||||||  ||||||||||||||    
T  26924253 taaaaagtcaactttttcttataaataggaccggagggag 26924214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 62
Target Start/End: Original strand, 29256699 - 29256742
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggagg 62  Q
    ||||| |||||||||||||||||||||||||  |||||||||||    
T  29256699 atgaatctaaaaagtcaactttttcttataaataggaccggagg 29256742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 62
Target Start/End: Original strand, 50155399 - 50155442
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggagg 62  Q
    ||||| |||||||||||||||||||||||||  |||||||||||    
T  50155399 atgaatctaaaaagtcaactttttcttataaataggaccggagg 50155442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 62
Target Start/End: Complemental strand, 52030915 - 52030872
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggagg 62  Q
    ||||| ||||||| |||| |||||||||||||||||||||||||    
T  52030915 atgaaactaaaaaatcaattttttcttataataaggaccggagg 52030872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 5966921 - 5966875
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    |||||||||||||| ||||| |||||| ||||||||| |||||||||    
T  5966921 atgaacctaaaaagccaactgtttcttgtaataaggatcggagggag 5966875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 18038735 - 18038689
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    |||||||||||||||||| | |||||||||||||||||  |||||||    
T  18038735 atgaacctaaaaagtcaaatatttcttataataaggactagagggag 18038689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 18038789 - 18038835
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||| |||||||||||| | ||| ||||||||||||||||||||||    
T  18038789 atgaatctaaaaagtcaaatgttttttataataaggaccggagggag 18038835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 49
Target Start/End: Complemental strand, 18744614 - 18744576
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataa 49  Q
    ||||||| ||||| |||||||||||||||||||||||||    
T  18744614 attattcaatgaatctaaaaagtcaactttttcttataa 18744576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 22182866 - 22182912
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    |||||| ||||||||||| | || |||||||||||||||||||||||    
T  22182866 atgaacttaaaaagtcaattgttgcttataataaggaccggagggag 22182912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 201
Target Start/End: Original strand, 34111748 - 34111818
Alignment:
Q  132 atgtagggatatttgtgtca-tttactaaatatataactttcttttctttcactttctattcattttcatt 201  Q
    ||||||| |||||| ||||| ||||||||  |||||| | ||||| ||||||||||||| |||||||||||    
T  34111748 atgtaggaatatttatgtcaatttactaacaatataagtatctttcctttcactttctactcattttcatt 34111818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 34174933 - 34174887
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    |||||||||||||||||| | |||||||||||||||| |||| ||||    
T  34174933 atgaacctaaaaagtcaattgtttcttataataaggatcggatggag 34174887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 34768375 - 34768417
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggag 61  Q
    ||||||||||||||||||||||| |||||||||  ||||||||    
T  34768375 atgaacctaaaaagtcaacttttgcttataatagtgaccggag 34768417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 22182806 - 22182766
Alignment:
Q  25 ctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    |||||||||||| | || |||||||||||||||||||||||    
T  22182806 ctaaaaagtcaattgttacttataataaggaccggagggag 22182766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 147 - 187
Target Start/End: Original strand, 32472277 - 32472317
Alignment:
Q  147 tgtcatttactaaatatataactttcttttctttcactttc 187  Q
    ||||||| ||||||||||  |||||||||||||||||||||    
T  32472277 tgtcattaactaaatataatactttcttttctttcactttc 32472317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 52112972 - 52113004
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataata 51  Q
    ||||||||||||||||||||||| |||||||||    
T  52112972 atgaacctaaaaagtcaacttttacttataata 52113004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 30438798 - 30438744
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| || ||||||    
T  30438798 attattctatgaatctaaaaagtcaactttttcttataataaggatcgaagggag 30438744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 11 - 64
Target Start/End: Original strand, 12605703 - 12605756
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggaggga 64  Q
    ||||||| |||||||||||| ||||||||||||||||||||| |||||||||||    
T  12605703 attattccatgaacctaaaatgtcaactttttcttataataaagaccggaggga 12605756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 28605663 - 28605717
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||||||||||| |||||| |||| |||||||||||||||||||||||| ||||    
T  28605663 attattctatgaatctaaaaggtcagctttttcttataataaggaccggatggag 28605717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 148 - 233
Target Start/End: Complemental strand, 24163596 - 24163509
Alignment:
Q  148 gtcatttactaaatatataactttcttttctttcactttctattcattttcatt--taccaaacaaccaaaaaatcatttcactttcc 233  Q
    |||||||||||||| |||| |||||||| ||||||||||||  ||| |||||||  | ||||||||| ||| |||||| |||||||||    
T  24163596 gtcatttactaaatttatatctttctttcctttcactttcttatcactttcattcattccaaacaactaaacaatcatctcactttcc 24163509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 132 - 230
Target Start/End: Complemental strand, 10546850 - 10546748
Alignment:
Q  132 atgtagggatatttgtgtca-tttactaaatatataactttctttt-ctttcactttctattcattttcatt--taccaaacaaccaaaaaatcatttca 227  Q
    |||||||||||||| ||||| |||||||||||||||||| |||||| ||||||| |||| |||||  ||| |   |||||||||| | ||||||||||||    
T  10546850 atgtagggatatttatgtcaatttactaaatatataactatcttttcctttcacgttcttttcatcatcactcaaaccaaacaactagaaaatcatttca 10546751  T
Q  228 ctt 230  Q
    |||    
T  10546750 ctt 10546748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 12217584 - 12217635
Alignment:
Q  11 attattctatgaacctaaaaagtcaa-ctttttcttataataaggaccggag 61  Q
    ||||||||||||| ||||||||||||  ||||||||||||||||||||||||    
T  12217584 attattctatgaatctaaaaagtcaatttttttcttataataaggaccggag 12217635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 122 - 233
Target Start/End: Original strand, 31893935 - 31894049
Alignment:
Q  122 ttttattctaatgtagggatatttgtgtcatttac-taaatatataactttcttttctttcactttctattcattttcatt--taccaaacaaccaaaaa 218  Q
    |||||||| ||||||||||||||| ||||||||||  |||||||| | ||| ||| || | ||||||| |||| |||||||  ||||||| ||| ||| |    
T  31893935 ttttattcaaatgtagggatatttatgtcatttacaaaaatatatcattttttttcctctaactttcttttcactttcatttataccaaataacaaaaca 31894034  T
Q  219 atcatttcactttcc 233  Q
    ||||| |||||||||    
T  31894035 atcatctcactttcc 31894049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 2913388 - 2913334
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||||| ||||| |||||||||||| | || |||||||||||||||||||||||    
T  2913388 attattcaatgaatctaaaaagtcaaatgttgcttataataaggaccggagggag 2913334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 2913434 - 2913480
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    |||||||||||||||||| | || |||||||||||||||||||||||    
T  2913434 atgaacctaaaaagtcaattgttgcttataataaggaccggagggag 2913480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 10145308 - 10145362
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    |||||| ||||||||||||||||||| ||||| ||||||||| ||||| ||||||    
T  10145308 attattttatgaacctaaaaagtcaatttttttttataataaagaccgaagggag 10145362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 23916228 - 23916274
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||| |||||||||||| | ||||||||||||||||||||||||||    
T  23916228 atgaatctaaaaagtcaattgtttcttataataaggaccggagggag 23916274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 31632204 - 31632250
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||||||||||||||||||||| |||||||||  ||||||||||||    
T  31632204 atgaacctaaaaagtcaacttttacttataatagtgaccggagggag 31632250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 18491758 - 18491803
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggaggga 64  Q
    ||||||||||||||||||||||| |||||||||  |||||||||||    
T  18491758 atgaacctaaaaagtcaacttttacttataatagtgaccggaggga 18491803  T

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Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 62
Target Start/End: Original strand, 8265073 - 8265116
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggagg 62  Q
    |||||| |||||| ||||||||||||||||||||||| ||||||    
T  8265073 atgaacttaaaaaatcaactttttcttataataaggaacggagg 8265116  T

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Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 17598166 - 17598115
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataaggaccggagg 62  Q
    |||||||||| ||  ||||||||||| |||||||||||| ||||||||||||    
T  17598166 attattctataaatttaaaaagtcaattttttcttataagaaggaccggagg 17598115  T

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Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 122 - 187
Target Start/End: Complemental strand, 3651919 - 3651853
Alignment:
Q  122 ttttattctaatgtagggatatttgtgtcatttact-aaatatataactttcttttctttcactttc 187  Q
    |||||||| ||||||||||||| | ||||||||| | |||||||| ||||||||| || ||||||||    
T  3651919 ttttattcaaatgtagggatatctatgtcatttaataaaatatatcactttctttcctctcactttc 3651853  T

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Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 163 - 233
Target Start/End: Complemental strand, 30496502 - 30496429
Alignment:
Q  163 tataactttcttttctttcactttctattcattttcatt--taccaaacaaccaaaa-aatcatttcactttcc 233  Q
    ||||||||||||| |||||||||| | |||| |||||||  ||||||||||| |||| |||||| |||||||||    
T  30496502 tataactttctttcctttcactttattttcactttcattcataccaaacaactaaaacaatcatctcactttcc 30496429  T

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Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 52
Target Start/End: Complemental strand, 9343175 - 9343134
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataa 52  Q
    ||||||||||||| |||||||||||| | |||||||||||||    
T  9343175 attattctatgaatctaaaaagtcaattatttcttataataa 9343134  T

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Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 122 - 233
Target Start/End: Original strand, 21453299 - 21453413
Alignment:
Q  122 ttttattctaatgtagggatatttgtgtcatttactaaatatataact--ttcttttctttcactttctattcattttca--tttaccaaacaaccaaaa 217  Q
    |||||||| |||||||||| || | |||||||||||||| ||||| ||  |||||| || ||||||||| |||| |||||  | ||||||| |||||||     
T  21453299 ttttattcaaatgtagggacatctatgtcatttactaaa-atatatctaattctttcctctcactttcttttcactttcaattataccaaaaaaccaaac 21453397  T
Q  218 aatcatttcactttcc 233  Q
    |||||| |||| ||||    
T  21453398 aatcatctcacattcc 21453413  T

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Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 359647 - 359683
Alignment:
Q  20 tgaacctaaaaagtcaactttttcttataataaggac 56  Q
    ||||||||||||||||| | |||||||||||||||||    
T  359647 tgaacctaaaaagtcaattgtttcttataataaggac 359683  T

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Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 3847501 - 3847545
Alignment:
Q  11 attattctatgaacctaaaaagtcaactttttcttataataagga 55  Q
    |||||| ||||||||||||||||||  |||||||||||| |||||    
T  3847501 attattatatgaacctaaaaagtcacttttttcttataacaagga 3847545  T

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Target: scaffold0200 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 25707 - 25759
Alignment:
Q  11 attattctatgaacctaaaa-agtcaactttttcttataataaggaccggagg 62  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  25707 attattctatgaacgtaaaaaagtcaactttttcttataataaggaccggagg 25759  T

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Target: scaffold0176 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 19349 - 19308
Alignment:
Q  14 attctatgaacctaaaaagtcaactttttcttataataagga 55  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  19349 attctatgaatctaaaaagtcaactttttcttataataagga 19308  T

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Target: scaffold0059 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 26633 - 26587
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||||||||||||||||   ||||||||||||||||||||||||||    
T  26633 atgaacctaaaaagtcaatcctttcttataataaggaccggagggag 26587  T

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Target: scaffold0287 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 12847 - 12888
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccgga 60  Q
    |||||||||||||||||| | |||||||||||||||||||||    
T  12847 atgaacctaaaaagtcaaatgtttcttataataaggaccgga 12888  T

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Target: scaffold0287; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 12793 - 12755
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggacc 57  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  12793 atgaacctaaaaagtcaaatatttcttataataaggacc 12755  T

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Target: scaffold0767 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 3862 - 3810
Alignment:
Q  13 tattctatgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||| ||||| | |||||||||| | ||||||||||||||||||||||||||    
T  3862 tattcaatgaatcaaaaaagtcaattgtttcttataataaggaccggagggag 3810  T

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Target: scaffold0110 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 40292 - 40338
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    ||||| ||||||||||||   ||||||||||||||||||||||||||    
T  40292 atgaatctaaaaagtcaaaagtttcttataataaggaccggagggag 40338  T

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Target: scaffold0023 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 112870 - 112824
Alignment:
Q  19 atgaacctaaaaagtcaactttttcttataataaggaccggagggag 65  Q
    |||||||||||| ||||| | |||||||||||||||||| |||||||    
T  112870 atgaacctaaaacgtcaattgtttcttataataaggacccgagggag 112824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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