View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1463_low_7 (Length: 248)
Name: NF1463_low_7
Description: NF1463
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1463_low_7 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 12 - 248
Target Start/End: Original strand, 13884794 - 13885030
Alignment:
| Q |
12 |
gaaaatagaaccggtgtatgttacatttaagtagatcttaggagaggttaatgtattttcccctttggtttattaaatccgaaatattaaatttgtattc |
111 |
Q |
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| T |
13884794 |
gaaaatagagccggtgtatgttacatttaagtagatcttaggagaggttaatgtatttttccctttggtttattaaatccgaaatattaaatttgtattc |
13884893 |
T |
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| Q |
112 |
aacttctatttgttgaactctaatgacacattattatagattggaatgacaaatacgcattattttgggttgtgacccttttccgattatatataatcca |
211 |
Q |
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| T |
13884894 |
aacttctatttgttgaactctaatgacacattattatagattggaatgacaaatacgcattattttgggttgcgacccttttccgattatatataatcca |
13884993 |
T |
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| Q |
212 |
aaatattatttccctgaaaaataaaatccaaaatatt |
248 |
Q |
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| T |
13884994 |
aaatattatttccctcaaaaataaaatccaaaatatt |
13885030 |
T |
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