View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14640_high_10 (Length: 328)
Name: NF14640_high_10
Description: NF14640
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14640_high_10 |
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Alignment Details
Target: chr8 (Bit Score: 275; Significance: 1e-154; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 14 - 324
Target Start/End: Original strand, 10490142 - 10490452
Alignment:
| Q |
14 |
acatcaaagaacgaagaagttaattagtaataacagtaaaaattcaccagtataaaaacaacctttgatggtccatattcataaattaaagtgcagctta |
113 |
Q |
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| T |
10490142 |
acatcaaagaaagaagaagttaattagtaataacagtaaaaattcaccagtataaaaacaacctttgatggtccatattcataaattaaagtgcaactta |
10490241 |
T |
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| Q |
114 |
aatcaactaattcacaatagtctaaacaataataaacataaatttcagcgtgtgagagaagcataagccaatattgcgagaatgtaaacttacgatggca |
213 |
Q |
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| T |
10490242 |
aatcaactaattcacaatagtctaaacaaaaataaacataaatttcagcgtgtgagagaagcataagccaatattgcgagaatgtaaacttacgatggca |
10490341 |
T |
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| Q |
214 |
acggcaggatgagtataaacccctccatgtgaagaaaatggtggtgcatatggtggcccttttggatgcatcataggctgacagaaataataagttggca |
313 |
Q |
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||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| | ||||||||||||||||||| ||||| |||||||||||| |
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| T |
10490342 |
acggcaggatgagtataaacccctccatgtgaataaaatggtggtgcatatggcggcccatatggatgcatcataggctgaaagaaacaataagttggca |
10490441 |
T |
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| Q |
314 |
aattattcatc |
324 |
Q |
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||||||||||| |
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| T |
10490442 |
aattattcatc |
10490452 |
T |
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