View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14640_low_18 (Length: 294)
Name: NF14640_low_18
Description: NF14640
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14640_low_18 |
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Alignment Details
Target: chr5 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 1 - 280
Target Start/End: Complemental strand, 29661105 - 29660826
Alignment:
| Q |
1 |
agaaattgaactacaaaacatataacatgaaaagttttggtaagatatagtaatctgcacacaagtcttctatatgctgatggattgtaataaggaggca |
100 |
Q |
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| T |
29661105 |
agaaattgaactacaaaacatataacatgaaaagttttggtaagatatagtaatctgcacacaagtcttctatatgctgatggattgtaataaggaggca |
29661006 |
T |
|
| Q |
101 |
aagatgcatcaagcttggtgagaggagtaagacagggcttgactgcaatcaaacctttgtcagagagaatatcaagggcatattttctctgattggggtg |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
29661005 |
aagatgcatcaagcttggtgagaggagtaagacagggcttggctgcaatcaaacctttgtcagagagaatatcaagggcatattctctctgattggggtg |
29660906 |
T |
|
| Q |
201 |
aatactttaatggaacgatccacgtccattctaagtatgcattttagggagctgaaatccttaattttgaaggtcgaaac |
280 |
Q |
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|||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||| |
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| T |
29660905 |
aatactttaatggaacgatccacgtccaatctaagtatgcattttagggagctcaaatacttaattttgaaggtcgaaac |
29660826 |
T |
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