View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14640_low_28 (Length: 245)
Name: NF14640_low_28
Description: NF14640
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14640_low_28 |
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Alignment Details
Target: chr1 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 19 - 242
Target Start/End: Complemental strand, 8091742 - 8091519
Alignment:
| Q |
19 |
atatcggatgaaaaagttaatacattgagtaacatataacttagatgatatatattttgcaaatagacaccgacctcgtttagagaaaagtcaaattcct |
118 |
Q |
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| T |
8091742 |
atatcggatgaaaaagttaatatattgagtaacatataacttagatgatatatattttgcaaatagacaccgacctcgtttagagaaaagtcaaattcct |
8091643 |
T |
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| Q |
119 |
aattttcaattcaaataacaaaacatggcaacagggctagcatgggacaagaaaaataacattatcttacttggtcgtatttgtagcaaatggagtaagc |
218 |
Q |
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| T |
8091642 |
aattttcaattcaaataacaaaacatggcaacagggctagcatgggccaagaaaaataacattatcttacttggtcgtatttgtagcaaatggagtaagc |
8091543 |
T |
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| Q |
219 |
cacggaagaatcttatccatttca |
242 |
Q |
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|||||||||||||||||||||||| |
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| T |
8091542 |
cacggaagaatcttatccatttca |
8091519 |
T |
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