View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14640_low_31 (Length: 228)
Name: NF14640_low_31
Description: NF14640
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14640_low_31 |
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Alignment Details
Target: chr1 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 8091481 - 8091255
Alignment:
| Q |
1 |
caattagcatattccaagtaatactaaaatatcaaattggtcgctaaatttagcatctttaacacttaacgataaaattagagatggatttcgctttgtt |
100 |
Q |
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| T |
8091481 |
caattagcatattccaagtaatactaaaatatcaaattggtcgctaaatttagcatctttaacacttagcgataaaattagagatgaatttcgctttgtt |
8091382 |
T |
|
| Q |
101 |
ctatctgttaagttcggttgttatttcaactttttctaatagttaacacggtgagaagtgatatttacctctttcatgacatcatcattttgcagccgcg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8091381 |
ctatctgttaagttcggttgttatttcaactttttctaatagttaacacggtgagaagtgatatttacctctttcatgacatcatcattttgcagccgcg |
8091282 |
T |
|
| Q |
201 |
aaggaagggcattcttaatattcttgg |
227 |
Q |
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|||||||||||||||||||||| |||| |
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| T |
8091281 |
aaggaagggcattcttaatattattgg |
8091255 |
T |
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