View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14640_low_5 (Length: 494)
Name: NF14640_low_5
Description: NF14640
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14640_low_5 |
 | |
|
Alignment Details
Target: chr3 (Bit Score: 438; Significance: 0; HSPs: 29)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 438; E-Value: 0
Query Start/End: Original strand, 22 - 487
Target Start/End: Complemental strand, 24839995 - 24839530
Alignment:
| Q |
22 |
tagtgaaatgttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataaggatttaag |
121 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
24839995 |
tagtgaaatgttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataacgatttaag |
24839896 |
T |
|
| Q |
122 |
gttgtttaagaacacagttgttgatttcaaaaaatttcctgataaatttccctttatgttggacgttaatgtacaatcacccttttacctggttcaagtt |
221 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24839895 |
gttgtttaagaacacaattgttgatttcaaaaaatttcctgataaatttccctttatgctggacgttaatgtacaatcacccttttacctggttcaagtt |
24839796 |
T |
|
| Q |
222 |
tgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgagcaataatcgagaccatgtattgttgagatggcataatgttaaggccttgaaaa |
321 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
24839795 |
tgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgggcaataatcgagaccatgtattgttgaggtggcataatgttaaggccttgaaaa |
24839696 |
T |
|
| Q |
322 |
ttgacaatgtgaggttggcattagactcagccatcgatgattttatttggcgtccttatgttcaatatgttgataagtgtggagtgttttatccaaagga |
421 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24839695 |
ttgacaatgtgaggttggcattagactcagtcatcgatgattttatttggcgtccttatgttcaatatgttgataagtgtggagtgttttatccaaagga |
24839596 |
T |
|
| Q |
422 |
tgaaactttggtaccatttaagaaagatttggtagtagaacaaatgctctcatttgctatattctt |
487 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
24839595 |
tgaaactttggtaccatttaagaaagatttggtagtagaacaaatgctctcatttgttatattctt |
24839530 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 332; E-Value: 0
Query Start/End: Original strand, 37 - 487
Target Start/End: Original strand, 19943828 - 19944279
Alignment:
| Q |
37 |
tgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataaggatttaaggttgtttaagaacac |
136 |
Q |
| |
|
|||||||| ||||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||||| |
|
|
| T |
19943828 |
tgtttcctattgctgttcatcttgctagagggattcctatggctttggcacctgctgttttggctagcttatataaggatttgagtttgtttaagaaaca |
19943927 |
T |
|
| Q |
137 |
agttgttgatttcaaaaaatttcctgataaattt-ccctttatgttggacgttaatgtacaatcacccttttacctggttcaagtttgggtttgggaaag |
235 |
Q |
| |
|
| |||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19943928 |
aattgttgatttgaaaaaatgtcctgataaattttccctttatgttggacgttaatgtacaatcacccttttacctggttcaagtttgggtttgggaaag |
19944027 |
T |
|
| Q |
236 |
gttcaaaaatttgcagccacaacccaagttgagcaataatcgagaccatgtattgttgagatggcataatgttaaggccttgaaaattgacaatgtgagg |
335 |
Q |
| |
|
|||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || |
|
|
| T |
19944028 |
gttcaaaaatttgcagccacaaccaaagttgatcaataatggagaccatgtattgttgaggtggcataatgttaaggccttgaaaattgacaatgtgggg |
19944127 |
T |
|
| Q |
336 |
ttggcattagactcagccatcgatgattttatttggcgtccttatgttcaatatgttgataagtgtggagtgttttatccaaaggatgaaactttggtac |
435 |
Q |
| |
|
||||||||||| ||||| ||| ||||||||||||| ||||||||||||||||||| ||||||||||||||| | ||||||||| |||||||||||||||| |
|
|
| T |
19944128 |
ttggcattagattcagctatcaatgattttatttgccgtccttatgttcaatatgctgataagtgtggagtatattatccaaatgatgaaactttggtac |
19944227 |
T |
|
| Q |
436 |
catttaagaaagatttggtagtagaacaaatgctctcatttgctatattctt |
487 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
19944228 |
catttaaaaaagatttggtagtagaacaaatgctctcatttgttatattctt |
19944279 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 24 - 476
Target Start/End: Original strand, 19858171 - 19858623
Alignment:
| Q |
24 |
gtgaaatgttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataaggatttaaggt |
123 |
Q |
| |
|
|||||| | |||||||||||| ||||| || ||| |||||||| ||| |||| |||||||||||||||||||||||||||||||||| ||||| || | |
|
|
| T |
19858171 |
gtgaaaagatctttgtttcctattgctattggtcttgctagaggaaatactatcgctttggcacctgctgttttggctagcttatataacgatttgagtt |
19858270 |
T |
|
| Q |
124 |
tgtttaagaacacagttgttgatttcaaaaaatttcctgataaatttccctttatgttggacgttaatgtacaatcacccttttacctggttcaagtttg |
223 |
Q |
| |
|
|||||||||| | ||||||| || ||||||| || | |||||||||| || ||||||||||||||||| |||||||||||||| || |||||||||| |
|
|
| T |
19858271 |
tgtttaagaaacaaattgttgaattgaaaaaatgtcgttataaatttccattggtgttggacgttaatgtataatcacccttttacttgcttcaagtttg |
19858370 |
T |
|
| Q |
224 |
ggtttgggaaaggttcaaaaatttgcagccacaacccaagttgagcaataatcgagaccatgtattgttgagatggcataatgttaaggccttgaaaatt |
323 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||| ||||| ||| || |||| | | ||||||| || |||||||| ||||||||||||||| || |
|
|
| T |
19858371 |
ggtttgggaaaggttcaaaaatttagagccacaacccatgttgatcaagcatggagaacctttattgtttaggtggcataaggttaaggccttgaaagtt |
19858470 |
T |
|
| Q |
324 |
gacaatgtgaggttggcattagactcagccatcgatgattttatttggcgtccttatgttcaatatgttgataagtgtggagtgttttatccaaaggatg |
423 |
Q |
| |
|
|||||||| | ||||||||||||||| || || ||||||||||||||||||||||| ||| ||||| |||||||||||| ||||||||||||| || | |
|
|
| T |
19858471 |
gacaatgttaagttggcattagactcggctattgatgattttatttggcgtccttacgttagatatgcagataagtgtggactgttttatccaaatgacg |
19858570 |
T |
|
| Q |
424 |
aaactttggtaccatttaagaaagatttggtagtagaacaaatgctctcattt |
476 |
Q |
| |
|
||| || |||| ||| | ||||||||||||| | ||||||||||||||||| |
|
|
| T |
19858571 |
aaatttgggtatcatattagaaagatttggtcgataaacaaatgctctcattt |
19858623 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 24 - 483
Target Start/End: Original strand, 26647100 - 26647562
Alignment:
| Q |
24 |
gtgaaatgttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataaggatttaaggt |
123 |
Q |
| |
|
|||||| ||| |||||||||| ||||||||||||| |||||||||||||| ||| |||||||||| |||||||| ||||||||||||||||||||||| | |
|
|
| T |
26647100 |
gtgaaaagttgtttgtttcctattgctgttcatcttgctagagggaatccaattgctttggcaccggctgttttagctagcttatataaggatttaagtt |
26647199 |
T |
|
| Q |
124 |
tgtttaagaacacagttgttgatttcaaaaaatttcctgat---------aaatttccctttatgttggacgttaatgtacaatcacccttttacctggt |
214 |
Q |
| |
|
|||||||||| ||| |||||||||| |||||| || ||||| | || ||| || ||| |||| | | ||||||||||||||| |||| |
|
|
| T |
26647200 |
tgtttaagaaaacacttgttgatttgaaaaaaatttctgatggtggtgatagatatccttt------ggaagttactcttcaatcacccttttacttggt |
26647293 |
T |
|
| Q |
215 |
tcaagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgagcaataatcgagaccatgtattgttgagatggcataatgttaaggcc |
314 |
Q |
| |
|
|||| ||||||| |||||||||||||||||||| || ||||||||||| |||| ||| | |||||| | | ||||| || |||||||| |||||| | |
|
|
| T |
26647294 |
tcaaatttgggtgtgggaaaggttcaaaaatttacaaccacaacccaatttgatcaaccaaggagaccctttgttgtttaggtggcataaggttaagatc |
26647393 |
T |
|
| Q |
315 |
ttgaaaattgacaatgtgaggttggcattagactcagccatcgatgattttatttggcgtccttatgttcaatatgttgataagtgtggagtgttttatc |
414 |
Q |
| |
|
||||||||||||| ||| | || |||| |||| || || | ||||||||| ||||||||||||||||| ||||| ||||||||||| | ||||||||| |
|
|
| T |
26647394 |
ttgaaaattgacagtgttaagtgggcactagattcggctgttgatgattttctttggcgtccttatgttagatatgctgataagtgtgaattgttttatc |
26647493 |
T |
|
| Q |
415 |
caaaggatgaaactttggtaccatttaagaaagatttggtagtagaacaaatgctctcatttgctatat |
483 |
Q |
| |
|
|||| ||||||| || |||||||||||||||||||||||| | ||||||||||||||||||| ||||| |
|
|
| T |
26647494 |
caaatgatgaaatttcggtaccatttaagaaagatttggttgatgaacaaatgctctcatttgttatat |
26647562 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 24 - 477
Target Start/End: Original strand, 19853611 - 19854052
Alignment:
| Q |
24 |
gtgaaatgttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataaggatttaaggt |
123 |
Q |
| |
|
|||||| | |||||||||||| ||||| ||| ||| |||||||| ||| ||||| |||||||||||||||||||||||||||||||||| ||||| || | |
|
|
| T |
19853611 |
gtgaaaagatctttgtttcctattgctattcgtcttgctagaggtaatactattgctttggcacctgctgttttggctagcttatataacgatttgagtt |
19853710 |
T |
|
| Q |
124 |
tgtttaagaacacagttgttgatttcaaaaaatttcctgataaatttccctttatgttggacgttaatgtacaatcacccttttacctggttcaagtttg |
223 |
Q |
| |
|
|||||||||| | | ||||||||||||||||||||||| ||| || |||||| | ||||||||||||||| |||| |||| ||| |
|
|
| T |
19853711 |
tgtttaagaaaaaaattgttgatttcaaaaaatttcct-----------ctt-------gatgttaatctgcaatcacccttttacttggtacaagcttg |
19853792 |
T |
|
| Q |
224 |
ggtttgggaaaggttcaaaaatttgcagccacaacccaagttgagcaataatcgagaccatgtattgttgagatggcataatgttaa---ggccttgaaa |
320 |
Q |
| |
|
||| ||||| || |||| |||||||||||||||||| ||||||| ||| ||| ||||||||||||||||||| |||||||| ||| | | |||||||| |
|
|
| T |
19853793 |
ggtgtgggagagattcataaatttgcagccacaaccgaagttgatcaacaatggagaccatgtattgttgaggtggcataaggttgaagcgcccttgaaa |
19853892 |
T |
|
| Q |
321 |
attgacaatgtgaggttggcattaga---ctcagccatcgatgattttatttggcgtccttatgttcaatatgttgataagtgtggagtgttttatccaa |
417 |
Q |
| |
|
||| || ||||||||||||||||||| ||| | || ||||||||||||||||||||||||||| |||| | ||||||||||| ||||||| || | |
|
|
| T |
19853893 |
attaaccatgtgaggttggcattagattcatcaacaatggatgattttatttggcgtccttatgttagctatgctcataagtgtggaatgttttacccga |
19853992 |
T |
|
| Q |
418 |
aggatgaaactttggtaccatttaagaaagatttggtagtagaacaaatgctctcatttg |
477 |
Q |
| |
|
| ||||||| | ||||||||||||||| |||||||| | |||||||||||| ||||| |
|
|
| T |
19853993 |
atgatgaaattcgggtaccatttaagaacgatttggtggataaacaaatgctcttatttg |
19854052 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 22 - 453
Target Start/End: Original strand, 26653246 - 26653679
Alignment:
| Q |
22 |
tagtgaaatgttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataaggatttaag |
121 |
Q |
| |
|
|||||||| ||||||||||| || ||||||||||||| |||||||| ||||||||| |||||||||| |||||||| ||||| |||||||||| || | |
|
|
| T |
26653246 |
tagtgaaaagttctttgttttctattgctgttcatcttgctagaggaaatcctattgctttggcaccagctgttttagctagtatatataaggacttgac |
26653345 |
T |
|
| Q |
122 |
gttgtttaagaacacagttgttgattt--caaaaaatt-------tcctgataaatttccctttatgttggacgttaatgtacaatcacccttttacctg |
212 |
Q |
| |
|
||||||||||| ||| |||||| ||| ||||| ||| | ||||| |||||| || ||| |||||| ||| ||||||||||||| || |
|
|
| T |
26653346 |
tttgtttaagaaaacaattgttggtttgtcaaaatattatgttggtggtgatagatttccttt------ggaagttaatctacgatcacccttttacttg |
26653439 |
T |
|
| Q |
213 |
gttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgagcaataatcgagaccatgtattgttgagatggcataatgttaagg |
312 |
Q |
| |
|
|||||| ||||||| ||||| ||||||| ||||||||| |||||||||||||||| ||||| | ||||||| ||||||||| |||||||| |||| | |
|
|
| T |
26653440 |
gttcaaatttgggtgtgggagaggttcacaaatttgcaaccacaacccaagttgatcaatagtgaagaccattcattgttgaggtggcataaggttatgc |
26653539 |
T |
|
| Q |
313 |
ccttgaaaattgacaatgtgaggttggcattagactcagccatcgatgattttatttggcgtccttatgttcaatatgttgataagtgtggagtgtttta |
412 |
Q |
| |
|
|||| | |||| |||||||||||||||||||||||||||| || ||||||||| |||||||||| |||||| |||| | | ||||||||| ||||||| |
|
|
| T |
26653540 |
cctt-ataatttacaatgtgaggttggcattagactcagcaattgatgattttctttggcgtccatatgttagatatcctaacaagtgtggaatgtttta |
26653638 |
T |
|
| Q |
413 |
tccaaaggatgaaactttggtaccatttaagaaagatttgg |
453 |
Q |
| |
|
|||||| |||||| || ||||||||||||||| ||||||| |
|
|
| T |
26653639 |
tccaaataatgaaatttgggtaccatttaagaaggatttgg |
26653679 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 195 - 483
Target Start/End: Complemental strand, 20016046 - 20015761
Alignment:
| Q |
195 |
caatcacccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgagcaataatcgagaccatgtattgttga |
294 |
Q |
| |
|
||||||||| |||| |||||||| ||||||| ||||| |||||||||| ||| || |||||||||| ||||| |||| || ||||| | ||||||| | |
|
|
| T |
20016046 |
caatcacccatttatttggttcaaatttgggtgtgggagaggttcaaaattttacaaccacaacccatgttgatcaatcatgaagaccctttattgttta |
20015947 |
T |
|
| Q |
295 |
gatggcataatgttaaggccttgaaaattgacaatgtgaggttggcattagactcagccatcgatgattttatttggcgtccttatgttca-atatgttg |
393 |
Q |
| |
|
| |||||||| ||| |||| ||||||||||||||||| | | |||||||||||||||| || ||||||||| |||||||||| ||| |||| ||||| || |
|
|
| T |
20015946 |
ggtggcataaggttcaggctttgaaaattgacaatgttatggtggcattagactcagctattgatgattttctttggcgtccatat-ttcagatatgctg |
20015848 |
T |
|
| Q |
394 |
ataagtgtggagtgttttatccaaaggatgaaactttggtaccatttaagaaagatttggtagtagaacaaatgctctcatttgctatat |
483 |
Q |
| |
|
||||||||| ||||||||||||| |||| | ||| |||||||||||||||||||||| || |||||||||||||||||| ||||| |
|
|
| T |
20015847 |
ataagtgtgatttgttttatccaaatgatgcattttttgtaccatttaagaaagatttgg--ata-aacaaatgctctcatttgttatat |
20015761 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 195 - 453
Target Start/End: Original strand, 19956357 - 19956615
Alignment:
| Q |
195 |
caatcacccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgagcaataatcgagaccatgtattgttga |
294 |
Q |
| |
|
||||||||||||||| |||||||| ||||||| |||||||||||||||||||| ||||||||||||| |||| || || | ||| | | ||||| | |
|
|
| T |
19956357 |
caatcacccttttacttggttcaaatttgggtgtgggaaaggttcaaaaatttacagccacaacccatgttgttgaaccataggaacccttttttgttta |
19956456 |
T |
|
| Q |
295 |
gatggcataatgttaaggccttgaaaattgacaatgtgaggttggcattagactcagccatcgatgattttatttggcgtccttatgttcaatatgttga |
394 |
Q |
| |
|
| |||||||| |||||| |||||| | |||||||||| ||| ||||||||||||| || || ||||| ||| |||||||||| ||||||| |||| | | |
|
|
| T |
19956457 |
ggtggcataaggttaagcccttgatagttgacaatgttaggatggcattagactcggctatggatgactttctttggcgtccatatgttcgatattctca |
19956556 |
T |
|
| Q |
395 |
taagtgtggagtgttttatccaaaggatgaaactttggtaccatttaagaaagatttgg |
453 |
Q |
| |
|
||| ||||| | ||||||||||| ||||||| |||||||||||||||||| ||||||| |
|
|
| T |
19956557 |
taaatgtgggctattttatccaaatgatgaaattttggtaccatttaagaaggatttgg |
19956615 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 201 - 453
Target Start/End: Original strand, 17114992 - 17115244
Alignment:
| Q |
201 |
cccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgagcaataatcgagaccatgtattgttgagatggc |
300 |
Q |
| |
|
||||||||| |||||||| ||||| | ||||| |||||||||||||| || |||||| ||| ||||| ||| || |||||| | ||||||| || |||| |
|
|
| T |
17114992 |
cccttttacttggttcaaatttggatgtgggagaggttcaaaaatttacaaccacaatccatgttgatcaaccatggagaccctttattgtttaggtggc |
17115091 |
T |
|
| Q |
301 |
ataatgttaaggccttgaaaattgacaatgtgaggttggcattagactcagccatcgatgattttatttggcgtccttatgttcaatatgttgataagtg |
400 |
Q |
| |
|
||| ||| ||||| |||||||||||||||| | | | |||||||||| ||| ||||||||||| |||||||||| || || ||||| ||||||||| |
|
|
| T |
17115092 |
atagggttcaggccgtgaaaattgacaatgttaagctagcattagacttagctgtcgatgattttctttggcgtccatacattagatatgctgataagtg |
17115191 |
T |
|
| Q |
401 |
tggagtgttttatccaaaggatgaaactttggtaccatttaagaaagatttgg |
453 |
Q |
| |
|
|||| ||||||||||||| ||||||| |||||||||||| || |||||||||| |
|
|
| T |
17115192 |
tggaatgttttatccaaatgatgaaattttggtaccattcaaaaaagatttgg |
17115244 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 195 - 483
Target Start/End: Original strand, 19951394 - 19951682
Alignment:
| Q |
195 |
caatcacccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgagcaataatcgagaccatgtattgttga |
294 |
Q |
| |
|
||||||||||||||| |||||||| ||||| ||||||| ||||| |||||||| || |||||||||| | || || || |||||| | | ||||| | |
|
|
| T |
19951394 |
caatcacccttttacttggttcaaatttggatttgggagaggtttaaaaatttacaaccacaacccatgccgataaaccatggagacccttttttgttta |
19951493 |
T |
|
| Q |
295 |
gatggcataatgttaaggccttgaaaattgacaatgtgaggttggcattagactcagccatcgatgattttatttggcgtccttatgttcaatatgttga |
394 |
Q |
| |
|
| |||||||| |||||| |||||| ||| || |||| ||||| ||||||||| |||| || | |||||||||||||||||| |||||| ||||| ||| |
|
|
| T |
19951494 |
ggtggcataaggttaagcccttgagaatccacgatgttaggttagcattagacgcagctatgggtgattttatttggcgtccatatgttagatatgctga |
19951593 |
T |
|
| Q |
395 |
taagtgtggagtgttttatccaaaggatgaaactttggtaccatttaagaaagatttggtagtagaacaaatgctctcatttgctatat |
483 |
Q |
| |
|
|||||||||| |||||||||| || || |||| |||||| |||||||||||||||||||| | |||||||| | ||||||| ||||| |
|
|
| T |
19951594 |
taagtgtggaatgttttatccgaatgaagaaattttggtgccatttaagaaagatttggtggatcaacaaatgttgtcatttgttatat |
19951682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 322 - 477
Target Start/End: Original strand, 26652115 - 26652270
Alignment:
| Q |
322 |
ttgacaatgtgaggttggcattagactcagccatcgatgattttatttggcgtccttatgttcaatatgttgataagtgtggagtgttttatccaaagga |
421 |
Q |
| |
|
||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||| || |
|
|
| T |
26652115 |
ttgacaatgtgaggttggcattagattcagctatcaatgattttatttggcgtccttatgttcggtatgcagataagtgtgaagtgttttatccaaatga |
26652214 |
T |
|
| Q |
422 |
tgaaactttggtaccatttaagaaagatttggtagtagaacaaatgctctcatttg |
477 |
Q |
| |
|
| |||||||||||||||||||||||||||||| | ||||||||||||||||| |
|
|
| T |
26652215 |
cggaactttggtaccatttaagaaagatttggtggatatacaaatgctctcatttg |
26652270 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 195 - 444
Target Start/End: Original strand, 19838666 - 19838915
Alignment:
| Q |
195 |
caatcacccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgagcaataatcgagaccatgtattgttga |
294 |
Q |
| |
|
||||||||||||||| |||||||| ||||||| ||||| |||||||||||||| || |||||||| | |||| || | | |||| | | ||||| | |
|
|
| T |
19838666 |
caatcacccttttacttggttcaaatttgggtgtgggagaggttcaaaaatttacaaccacaaccaatgttgttgaaccagggggacccttttttgttta |
19838765 |
T |
|
| Q |
295 |
gatggcataatgttaaggccttgaaaattgacaatgtgaggttggcattagactcagccatcgatgattttatttggcgtccttatgttcaatatgttga |
394 |
Q |
| |
|
| |||||||| ||||||||||||| |||||||||| | ||| |||| |||||||| || || ||||| ||| |||||||||| ||||||| |||| ||| |
|
|
| T |
19838766 |
ggtggcataaagttaaggccttgataattgacaatattaggatggctttagactcggctatggatgactttctttggcgtccatatgttcgatattctga |
19838865 |
T |
|
| Q |
395 |
taagtgtggagtgttttatccaaaggatgaaactttggtaccatttaaga |
444 |
Q |
| |
|
|||||||| | ||||||||||||| ||||||| ||||||||||||||||| |
|
|
| T |
19838866 |
taagtgtgaactgttttatccaaatgatgaaattttggtaccatttaaga |
19838915 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 196 - 441
Target Start/End: Complemental strand, 20036447 - 20036202
Alignment:
| Q |
196 |
aatcacccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgagcaataatcgagaccatgtattgttgag |
295 |
Q |
| |
|
|||||||||||||| |||||||| ||||||| ||||| |||||||||||||| || |||||||||| |||| || || | |||| | | ||||| || |
|
|
| T |
20036447 |
aatcacccttttacttggttcaaatttgggtgtgggagaggttcaaaaatttacaaccacaacccatgttgttgaaccatggggacccttttttgtttag |
20036348 |
T |
|
| Q |
296 |
atggcataatgttaaggccttgaaaattgacaatgtgaggttggcattagactcagccatcgatgattttatttggcgtccttatgttcaatatgttgat |
395 |
Q |
| |
|
|||||||| |||||| |||||| ||||||||||| ||| ||||||||||||| || || ||||| ||| |||||||||| ||||||| |||| |||| |
|
|
| T |
20036347 |
gtggcataaggttaagcccttgatgattgacaatgttaggatggcattagactcggctatggatgactttctttggcgtccatatgttcgatattctgat |
20036248 |
T |
|
| Q |
396 |
aagtgtggagtgttttatccaaaggatgaaactttggtaccattta |
441 |
Q |
| |
|
|||| || | || |||||||||| |||||||||||||||||||||| |
|
|
| T |
20036247 |
aagtttgaactgctttatccaaatgatgaaactttggtaccattta |
20036202 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 33 - 439
Target Start/End: Original strand, 19812385 - 19812800
Alignment:
| Q |
33 |
tctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataaggatttaaggttgtttaaga |
132 |
Q |
| |
|
||||||||||| | ||| ||| ||| ||||||||| |||||||| |||||||||| ||||| ||||||||| ||||||| |||||||| |||||||||| |
|
|
| T |
19812385 |
tctttgtttccgatcgctattcttcttgctagagggtatcctattgctttggcaccagctgtcttggctagcatatataaagatttaagtttgtttaaga |
19812484 |
T |
|
| Q |
133 |
acacagttgttgatttcaaaaaatttcc---------tgataaatttccctttatgttggacgttaatgtacaatcacccttttacctggttcaagtttg |
223 |
Q |
| |
|
| ||| |||||||||| ||||| ||| ||||| ||||||| ||||| ||| | | ||||||||||||||| |||||||| |||| |
|
|
| T |
19812485 |
aaacaattgttgatttgtcaaaatatcctgttggtggtgatagatttccc------ttggagattactcttcaatcacccttttacttggttcaaatttg |
19812578 |
T |
|
| Q |
224 |
ggtttgggaaaggttcaaaaatttgcagccacaac------ccaagttgagcaataatcgagaccatgtattgttgagatggcataatgttaaggccttg |
317 |
Q |
| |
|
||||||||| ||||||||||||||||| ||||||| | | ||||| ||| || | |||| | | ||||| || |||||||| |||| || ||| |
|
|
| T |
19812579 |
ggtttgggagaggttcaaaaatttgcaaccacaacaacaaactatgttgatcaaccatggcgacccttttttgtttaggtggcataaggttacggactta |
19812678 |
T |
|
| Q |
318 |
aaaattgacaatgtgaggttggcattagactcagccatcgatgattttatttggcgtccttatgttcaatatgttgataagtgtggagtgttttatccaa |
417 |
Q |
| |
|
|||||||||||| ||||| || |||||||| || | ||||||||| |||||||||| |||||| ||||| |||||||||| | |||||||||||| |
|
|
| T |
19812679 |
tcaattgacaatgttaggttagcgttagactcggctgtggatgattttctttggcgtccatatgttagatatgccgataagtgtgcattgttttatccaa |
19812778 |
T |
|
| Q |
418 |
aggatgaaactttggtaccatt |
439 |
Q |
| |
|
| ||||||| || ||||||||| |
|
|
| T |
19812779 |
atgatgaaatttcggtaccatt |
19812800 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 37 - 453
Target Start/End: Original strand, 19818666 - 19819091
Alignment:
| Q |
37 |
tgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataaggatttaaggttgtttaagaacac |
136 |
Q |
| |
|
||||||||||||||||| |||| |||||||||||||||||| |||||||||| ||||||||||||| | | ||||| |||||||| ||||||||||| | |
|
|
| T |
19818666 |
tgtttcctgttgctgttaatcttgctagagggaatcctattgctttggcaccggctgttttggctaacatttataaagatttaagtttgtttaagaaaaa |
19818765 |
T |
|
| Q |
137 |
agttgttgattt--caaaaaatt-------tcctgataaatttccctttatgttggacgttaatgtacaatcacccttttacctggttcaagtttgggtt |
227 |
Q |
| |
|
| | |||||||| ||||| ||| | ||||| |||||| |||| || ||| | | |||||||||||||| |||||||| | ||||| |
|
|
| T |
19818766 |
aatagttgatttgtcaaaatattctgttggtggtgatagatttcc-ttta-----gaacttactcttcaatcacccttttatttggttcaaatatgggtg |
19818859 |
T |
|
| Q |
228 |
tgggaaaggttcaaaaatttgca------gccacaacccaagttgagcaataatcgagaccatgtattgttgagatggcataatgttaaggccttgaaaa |
321 |
Q |
| |
|
||||| |||||||||||| |||| ||||||| ||| ||||| || || |||||| | | ||||| || |||||| ||||| |||||||| ||| |
|
|
| T |
19818860 |
tgggagaggttcaaaaatatgcaaccactgccacaaaccatgttgataaaccatggagacccttttttgtttaggtggcatgatgttcaggccttggaaa |
19818959 |
T |
|
| Q |
322 |
ttgacaatgtgaggttggcattagactcagccatcgatgattttatttggcgtccttatgttcaatatgttgataagtgtggagtgttttatccaaagga |
421 |
Q |
| |
|
|||||||||| ||| ||||||||||||| || | ||||| ||| |||||||||| ||||||| |||| ||||||||||| |||||||||| || || |
|
|
| T |
19818960 |
ttgacaatgttaggatggcattagactcggctaaggatgactttctttggcgtccatatgttcgatattctgataagtgtgagctgttttatccgaatga |
19819059 |
T |
|
| Q |
422 |
tgaaactttggtaccatttaagaaagatttgg |
453 |
Q |
| |
|
|| || ||||||||||||||||| ||||||| |
|
|
| T |
19819060 |
tggaattttggtaccatttaagatggatttgg |
19819091 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 18 - 453
Target Start/End: Original strand, 20046213 - 20046651
Alignment:
| Q |
18 |
aatatagtgaaatgttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataaggatt |
117 |
Q |
| |
|
||||| |||||| || ||||||| || ||||| || |||| |||||||| ||||| ||| ||||||||||||||||||||| |||| |||||||||||| |
|
|
| T |
20046213 |
aatatggtgaaaaattgtttgttttctattgctattaatcttgctagaggaaatccaattgctttggcacctgctgttttgggtagcatatataaggatt |
20046312 |
T |
|
| Q |
118 |
taaggttgtttaagaacacagttgttgatttcaaaaaatttcc---------tgataaatttccctttatgttggacgttaatgtacaatcaccctttta |
208 |
Q |
| |
|
|||| || |||||||||||| || ||||| | ||||| ||| ||||| |||||| ||||| | ||| | | | |||||||||||| |
|
|
| T |
20046313 |
taagtttatttaagaacacaattattgatctgttaaaatatccggttggtggtgatagatttcc-----tgttgaat-ttactattctatcaccctttta |
20046406 |
T |
|
| Q |
209 |
cctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgagcaataatcgagaccatgtattgttgagatggcataatgtt |
308 |
Q |
| |
|
|||||||||||||||| ||||| |||||| ||| || | |||||||||| ||||| |||| | |||| | ||||||| || |||||||| ||| |
|
|
| T |
20046407 |
tttggttcaagtttgggtgtgggagaggttcgcaaaattaccaccacaacccatgttgatcaatcccagcgaccctttattgtttaggtggcataaggtt |
20046506 |
T |
|
| Q |
309 |
aaggccttgaaaattgacaatgtgaggttggcattagactcagccatcgatgattttatttggcgtccttatgttcaatatgttgataagtgtggagtgt |
408 |
Q |
| |
|
| || ||||||||||| ||||| | |||||||||||||||| | ||||||||||| |||||||||| |||||| |||| ||| ||||||||| | | |
|
|
| T |
20046507 |
cacgcattgaaaattgataatgttaagttggcattagactcaactgtcgatgattttctttggcgtccatatgttagatatcctgacaagtgtggaattt |
20046606 |
T |
|
| Q |
409 |
tttatccaaaggatgaaactttggtaccatttaagaaagatttgg |
453 |
Q |
| |
|
|||||||||| | |||| || ||||||||||||||| ||||||| |
|
|
| T |
20046607 |
tttatccaaataacgaaatttgggtaccatttaagaaggatttgg |
20046651 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 196 - 423
Target Start/End: Original strand, 19849264 - 19849497
Alignment:
| Q |
196 |
aatcacccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgca------gccacaacccaagttgagcaataatcgagaccatgtatt |
289 |
Q |
| |
|
||||||||||||| |||||||| ||||||| ||||| ||||||||||||||||| ||||||| ||| ||||| ||| || | || | | |||| |
|
|
| T |
19849264 |
aatcacccttttatttggttcaaatttgggtgtgggagaggttcaaaaatttgcaaccacagccacaaaccatgttgaccaaccatggggatcctttatt |
19849363 |
T |
|
| Q |
290 |
gttgagatggcataatgttaaggccttgaaaattgacaatgtgaggttggcattagactcagccatcgatgattttatttggcgtccttatgttcaatat |
389 |
Q |
| |
|
||| ||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||| || || ||||||||| |||||||||| |||| | |||| |
|
|
| T |
19849364 |
gtttagatggcataaggttcaggccttgaaaattgacaatgttaggttggcattagactcggctatggatgattttctttggcgtccatatgctagatat |
19849463 |
T |
|
| Q |
390 |
gttgataagtgtggagtgttttatccaaaggatg |
423 |
Q |
| |
|
| | |||| | |||| ||||||||||||| |||| |
|
|
| T |
19849464 |
gctcataattatggaatgttttatccaaatgatg |
19849497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 195 - 453
Target Start/End: Original strand, 19832142 - 19832400
Alignment:
| Q |
195 |
caatcacccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgagcaataatcgaga-ccatgtattgttg |
293 |
Q |
| |
|
||||||||||||||| |||||||| ||||||| ||||| |||||||||||||| || |||||||||| |||| || || | || |||| | ||||| |
|
|
| T |
19832142 |
caatcacccttttacttggttcaaatttgggtgtgggagaggttcaaaaatttacatccacaacccatgttgttgaacaaaggggaaccattt-ttgttt |
19832240 |
T |
|
| Q |
294 |
agatggcataatgttaaggccttgaaaattgacaatgtgaggttggcattagactcagccatcgatgattttatttggcgtccttatgttcaatatgttg |
393 |
Q |
| |
|
|| |||||||| |||||||||||| |||||||||||| ||| |||||||||||| || | ||||| ||| |||||||||| ||||||| |||| || |
|
|
| T |
19832241 |
aggtggcataaggttaaggccttggtaattgacaatgttaggatggcattagacttggctaaggatgactttctttggcgtccatatgttcgatattctg |
19832340 |
T |
|
| Q |
394 |
ataagtgtggagtgttttatccaaaggatgaaactttggtaccatttaagaaagatttgg |
453 |
Q |
| |
|
||||||||| |||||||||| || |||| || ||||||||||||||||| ||||||| |
|
|
| T |
19832341 |
ataagtgtgagctgttttatccgaatgatggaattttggtaccatttaagatggatttgg |
19832400 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 20 - 176
Target Start/End: Original strand, 19971706 - 19971862
Alignment:
| Q |
20 |
tatagtgaaatgttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataaggattta |
119 |
Q |
| |
|
|||||||||| |||||||||||||| ||||| ||||| | | |||||| ||| ||||| |||||||||| ||||||||||||||||||||||||||| | |
|
|
| T |
19971706 |
tatagtgaaaagttctttgtttcctattgctattcatttggttagaggcaatactattgctttggcaccaactgttttggctagcttatataaggattga |
19971805 |
T |
|
| Q |
120 |
aggttgtttaagaacacagttgttgatttcaaaaaatttcctgataaatttcccttt |
176 |
Q |
| |
|
| |||||||||| | |||||||||| ||||||| ||||||||||||||||||| |
|
|
| T |
19971806 |
actctgtttaagaaacaaattgttgatttgaaaaaatatcctgataaatttcccttt |
19971862 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 24 - 148
Target Start/End: Complemental strand, 20016220 - 20016096
Alignment:
| Q |
24 |
gtgaaatgttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataaggatttaaggt |
123 |
Q |
| |
|
|||||| ||| ||||||||| ||||| ||||||| |||||| | ||||||||| |||||||||| ||||| ||||||||| ||||||| |||||||| | |
|
|
| T |
20016220 |
gtgaaaagttgtttgtttccgattgctattcatcttgctagacgaaatcctattgctttggcaccagctgtcttggctagcatatataaagatttaagtt |
20016121 |
T |
|
| Q |
124 |
tgtttaagaacacagttgttgattt |
148 |
Q |
| |
|
|||||||||| ||| |||||||||| |
|
|
| T |
20016120 |
tgtttaagaaaacaattgttgattt |
20016096 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 24 - 148
Target Start/End: Complemental strand, 20036622 - 20036498
Alignment:
| Q |
24 |
gtgaaatgttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataaggatttaaggt |
123 |
Q |
| |
|
|||||| |||||||||||||| ||||||| |||| |||||||| |||| |||| |||| |||||||||||||| ||||| ||||||||||||||| | |
|
|
| T |
20036622 |
gtgaaaagttctttgtttcctattgctgtatatcttgctagaggaaatcgtattgctttagcacctgctgttttagctagtctatataaggatttaactt |
20036523 |
T |
|
| Q |
124 |
tgtttaagaacacagttgttgattt |
148 |
Q |
| |
|
|||||||||| ||| |||||||||| |
|
|
| T |
20036522 |
tgtttaagaaaacaattgttgattt |
20036498 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 24 - 133
Target Start/End: Original strand, 19956183 - 19956292
Alignment:
| Q |
24 |
gtgaaatgttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataaggatttaaggt |
123 |
Q |
| |
|
|||||| ||| |||||||||| ||| ||||||||| |||||||| ||||||||| |||||||||| |||||||| |||||| ||||||||||||||| | |
|
|
| T |
19956183 |
gtgaaaagttatttgtttcctattgttgttcatcttgctagaggaaatcctattgctttggcaccagctgttttagctagcatatataaggatttaactt |
19956282 |
T |
|
| Q |
124 |
tgtttaagaa |
133 |
Q |
| |
|
|||| ||||| |
|
|
| T |
19956283 |
tgttaaagaa |
19956292 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 24 - 133
Target Start/End: Original strand, 19849089 - 19849198
Alignment:
| Q |
24 |
gtgaaatgttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataaggatttaaggt |
123 |
Q |
| |
|
|||||| |||||||||||||| ||||||| |||| |||||||| |||| |||| |||| |||||||||||||| ||||| ||||||||||||||| | |
|
|
| T |
19849089 |
gtgaaaagttctttgtttcctattgctgtatatcttgctagaggaaatcgtattgctttagcacctgctgttttagctagtctatataaggatttaactt |
19849188 |
T |
|
| Q |
124 |
tgtttaagaa |
133 |
Q |
| |
|
|||||||||| |
|
|
| T |
19849189 |
tgtttaagaa |
19849198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 123 - 221
Target Start/End: Original strand, 26652015 - 26652116
Alignment:
| Q |
123 |
ttgtttaagaacacagttgttgatttcaaaaaatttcctgataaatttccctttatgttggacgttaatg---tacaatcacccttttacctggttcaag |
219 |
Q |
| |
|
||||||||||| ||| |||||||||| ||||||| ||||||||||||| |||| ||||||| ||||||| ||||||||||||||||| ||||||||| |
|
|
| T |
26652015 |
ttgtttaagaaaacacttgttgatttgaaaaaatgtcctgataaattttccttgttgttggaggttaatgtactacaatcacccttttacttggttcaag |
26652114 |
T |
|
| Q |
220 |
tt |
221 |
Q |
| |
|
|| |
|
|
| T |
26652115 |
tt |
26652116 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 195 - 434
Target Start/End: Original strand, 19989795 - 19990040
Alignment:
| Q |
195 |
caatcacccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgagcaataatcgagaccatgtattgttga |
294 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||| |||||||||||||| || |||||||||| | ||| ||| || ||||| | | ||||| | |
|
|
| T |
19989795 |
caatcacccttttacttggttcaagtttgggtttgggagaggttcaaaaatttacaaccacaacccatgctgatcaactatgaagacccttttttgttta |
19989894 |
T |
|
| Q |
295 |
gatggcataatgttaaggc------cttgaaaattgacaatgtgaggttggcattagactcagccatcgatgattttatttggcgtccttatgttcaata |
388 |
Q |
| |
|
| |||||||||| | || ||| || |||||||||| ||||||| |||| ||||||| | || ||||| |||||||||| |||||| || |
|
|
| T |
19989895 |
ggtggcataatgctgagagtgagaacttaaatgttgacaatgttaggttggaattaaactcagcaaagaatcattttctttggcgtccatatgttagatt |
19989994 |
T |
|
| Q |
389 |
tgttgataagtgtggagtgttttatccaaaggatgaaactttggta |
434 |
Q |
| |
|
|| ||| ||||||| | ||||||||||||| |||| ||||| |||| |
|
|
| T |
19989995 |
tgctgagaagtgtgaactgttttatccaaatgatggaacttgggta |
19990040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 46 - 148
Target Start/End: Original strand, 19951242 - 19951344
Alignment:
| Q |
46 |
ttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataaggatttaaggttgtttaagaacacagttgttga |
145 |
Q |
| |
|
||||| ||||||| |||||||| ||||||||| ||||||| || |||||||| |||||| ||||||||||||||| |||||||| || || ||||||| |
|
|
| T |
19951242 |
ttgctattcatcttgctagaggaaatcctattgctttggctccagctgttttagctagcatatataaggatttaactttgtttaaaaaagcaattgttga |
19951341 |
T |
|
| Q |
146 |
ttt |
148 |
Q |
| |
|
||| |
|
|
| T |
19951342 |
ttt |
19951344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 31 - 119
Target Start/End: Original strand, 19989628 - 19989716
Alignment:
| Q |
31 |
gttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataaggattta |
119 |
Q |
| |
|
||||||| |||| ||||||| ||||||| |||||||| ||||||||| | || |||||||| ||||||||||| || |||||||||||| |
|
|
| T |
19989628 |
gttctttctttcgtgttgctattcatcttgctagaggaaatcctattgcattagcacctgcagttttggctagtttgtataaggattta |
19989716 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 386 - 483
Target Start/End: Complemental strand, 20033991 - 20033894
Alignment:
| Q |
386 |
atatgttgataagtgtggagtgttttatccaaaggatgaaactttggtaccatttaagaaagatttggtagtagaacaaatgctctcatttgctatat |
483 |
Q |
| |
|
||||| |||||||||| || |||||||||| || ||||||| || |||||||||||||| |||||||| | |||||||||| ||||||| ||||| |
|
|
| T |
20033991 |
atatgctgataagtgtagactgttttatccgaatgatgaaatttcagtaccatttaagaatgatttggtggatcaacaaatgctgtcatttgttatat |
20033894 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 198 - 250
Target Start/End: Original strand, 30914919 - 30914971
Alignment:
| Q |
198 |
tcacccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgca |
250 |
Q |
| |
|
||||||||| || |||| ||| ||||||||||||| ||||| ||||||||||| |
|
|
| T |
30914919 |
tcaccctttgacttggtacaaatttgggtttgggagaggttaaaaaatttgca |
30914971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 134; Significance: 2e-69; HSPs: 6)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 164 - 453
Target Start/End: Original strand, 11544312 - 11544601
Alignment:
| Q |
164 |
taaatttccctttatgttggacgttaatgtacaatcacccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaag |
263 |
Q |
| |
|
||||||||| || | |||||| ||| |||| ||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||| ||| |||||||| |
|
|
| T |
11544312 |
taaatttccattgaagttggaggttgatgtgcaatcacccatttacttggttcaagtttgggtttgggagaggttcaaaaatttgcaaccaaaacccaag |
11544411 |
T |
|
| Q |
264 |
ttgagcaataatcgagaccatgtattgttgagatggcataatgttaaggccttgaaaattgacaatgtgaggttggcattagactcagccatcgatgatt |
363 |
Q |
| |
|
|||| ||| ||| ||||||||||| || |||| |||||| ||||| ||||||||||||| |||||||||||||||||||| ||||| | ||||||| |
|
|
| T |
11544412 |
ttgatcaacaatggagaccatgtactgatgaggtggcatttggttaaacccttgaaaattgataatgtgaggttggcattagattcagctaaggatgatt |
11544511 |
T |
|
| Q |
364 |
ttatttggcgtccttatgttcaatatgttgataagtgtggagtgttttatccaaaggatgaaactttggtaccatttaagaaagatttgg |
453 |
Q |
| |
|
|| ||||||| || ||||||||||||| ||||||| || | ||||||||||||| ||||||||||||||||| ||||||| ||||||| |
|
|
| T |
11544512 |
ttctttggcgcccatatgttcaatatgccgataagtttgaaatgttttatccaaatgatgaaactttggtaccgcttaagaaggatttgg |
11544601 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 31 - 426
Target Start/End: Complemental strand, 22689667 - 22689290
Alignment:
| Q |
31 |
gttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataaggatttaaggttgtttaa |
130 |
Q |
| |
|
||||||||||| || || || ||||||| |||||||| ||| ||||| |||||||||||||||||||||||||| ||||||||||||| || |||||||| |
|
|
| T |
22689667 |
gttctttgtttactatttctattcatctggctagaggcaatactattgctttggcacctgctgttttggctagcatatataaggatttgagtttgtttaa |
22689568 |
T |
|
| Q |
131 |
gaacacagttgttgatttcaaaaaatttcctgataaatttccctttatgttggacgttaatgtacaatcacccttttacctggttcaagtttgggtttgg |
230 |
Q |
| |
|
||| | |||||||||||||||||| ||||| | || |||||| | ||||||||||||||| |||||||||||||||| ||| |
|
|
| T |
22689567 |
gaaacaaattgttgatttcaaaaaatgtcctgtt------------------gatgttaatctgcaatcacccttttacttggttcaagtttgggtgtgg |
22689486 |
T |
|
| Q |
231 |
gaaaggttcaaaaatttgcagccacaacccaagttgagcaataatcgagaccatgtattgttgagatggcataatgttaaggccttgaaaattgacaatg |
330 |
Q |
| |
|
|| ||||||||||||||||| |||| |||| ||||| ||||| | |||||||||||| |||| |||||| ||||| || |||||||||||||||| |
|
|
| T |
22689485 |
gagaggttcaaaaatttgcaaccacggcccatgttgatcaatagtgaagaccatgtattattgaagtggcatttggttaatgctttgaaaattgacaatg |
22689386 |
T |
|
| Q |
331 |
tgaggttggcattagactcagccatcgatgattttatttggcgtccttatgttcaatatgttgataagtgtggagtgttttatccaaaggatgaaa |
426 |
Q |
| |
|
|||||||| | || || ||| | | ||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
22689385 |
tgaggttgacgttggattcaactgttgataattttatttggcgtccttatgttagatatgctgataagtgtggagtgttttatccaaaggatgaaa |
22689290 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 23 - 148
Target Start/End: Complemental strand, 22651913 - 22651788
Alignment:
| Q |
23 |
agtgaaatgttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataaggatttaagg |
122 |
Q |
| |
|
||||||| ||| |||||||||| ||||||||||||| |||||||| ||||||||| |||| ||||| ||||||||||||||| | ||||||||||||| |
|
|
| T |
22651913 |
agtgaaaagttgtttgtttcctattgctgttcatcttgctagaggaaatcctattgcttttgcaccagctgttttggctagcatgtataaggatttaact |
22651814 |
T |
|
| Q |
123 |
ttgtttaagaacacagttgttgattt |
148 |
Q |
| |
|
||||||||||| ||| |||||||||| |
|
|
| T |
22651813 |
ttgtttaagaaaacaattgttgattt |
22651788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 31 - 250
Target Start/End: Complemental strand, 11564146 - 11563918
Alignment:
| Q |
31 |
gttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataaggatttaaggttgtttaa |
130 |
Q |
| |
|
|||||||||||||| ||||||||||||| |||||||| || |||||| |||| ||||| | ||| ||||| |||||||||||||||| | |||||||| |
|
|
| T |
11564146 |
gttctttgtttcctattgctgttcatcttgctagaggaaaacctattgctttagcaccgtcggttctggcttgcttatataaggatttgcgtttgtttaa |
11564047 |
T |
|
| Q |
131 |
gaacacagttgttgatttcaaaaaatttcc---------tgataaatttccctttatgttggacgttaatgtacaatcacccttttacctggttcaagtt |
221 |
Q |
| |
|
| | ||| |||||| || | |||| | | || ||||||||| || | | |||| |||||||||||||||||| ||||| ||||| ||||| |
|
|
| T |
11564046 |
ggagacaattgttggattgacaaaaactacaacagaaggtgctaaatttccattgaaggtggaggttaatgtacaatcacccatttacttggttaaagtt |
11563947 |
T |
|
| Q |
222 |
tgggtttgggaaaggttcaaaaatttgca |
250 |
Q |
| |
|
||| ||||||| ||||||||||||||||| |
|
|
| T |
11563946 |
tggctttgggagaggttcaaaaatttgca |
11563918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 453
Target Start/End: Complemental strand, 22655985 - 22655903
Alignment:
| Q |
371 |
gcgtccttatgttcaatatgttgataagtgtggagtgttttatccaaaggatgaaactttggtaccatttaagaaagatttgg |
453 |
Q |
| |
|
|||||| ||||||| |||| ||||||||| | |||||||||| || ||||||| |||||||||||||||||| ||||||| |
|
|
| T |
22655985 |
gcgtccatatgttcgatattctgataagtgcgagctgttttatcctaatgatgaaattttggtaccatttaagaaggatttgg |
22655903 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 32 - 84
Target Start/End: Complemental strand, 22685694 - 22685642
Alignment:
| Q |
32 |
ttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttgg |
84 |
Q |
| |
|
|||| ||||||| ||||| ||||||| |||||||||||||||||| |||||| |
|
|
| T |
22685694 |
ttctatgtttccgattgctattcatcttgctagagggaatcctattgctttgg |
22685642 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 103; Significance: 5e-51; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 195 - 453
Target Start/End: Original strand, 9815307 - 9815565
Alignment:
| Q |
195 |
caatcacccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgagcaataatcgagaccatgtattgttga |
294 |
Q |
| |
|
||||||||||||||| |||||||| ||||||| ||||| |||||| ||||||| |||||| |||||| ||||| |||| | |||||| | ||||||| | |
|
|
| T |
9815307 |
caatcacccttttacttggttcaaatttgggtgtgggagaggttccaaaatttacagccagaacccatgttgatcaatcacggagaccctttattgttta |
9815406 |
T |
|
| Q |
295 |
gatggcataatgttaaggccttgaaaattgacaatgtgaggttggcattagactcagccatcgatgattttatttggcgtccttatgttcaatatgttga |
394 |
Q |
| |
|
| || ||||| ||| |||||||||||||||||||||| | | ||||||||||||| || || ||||||||| |||||||||| ||| || ||||| ||| |
|
|
| T |
9815407 |
ggtgacataaggttcaggccttgaaaattgacaatgttaagctggcattagactcggctatggatgattttctttggcgtccatattttagatatgctga |
9815506 |
T |
|
| Q |
395 |
taagtgtggagtgttttatccaaaggatgaaactttggtaccatttaagaaagatttgg |
453 |
Q |
| |
|
||| || || |||||||||||||| |||| |||||||||||||||||||||||||| |
|
|
| T |
9815507 |
taactgcggtgtgttttatccaaatgatgcgcttttggtaccatttaagaaagatttgg |
9815565 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 24 - 483
Target Start/End: Complemental strand, 26354946 - 26354487
Alignment:
| Q |
24 |
gtgaaatgttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataaggatttaaggt |
123 |
Q |
| |
|
|||||| |||||||||||||| ||||| ||||||| |||||||| ||| ||||| |||||||||| |||||||| |||||| |||||||||||||||| |
|
|
| T |
26354946 |
gtgaaaagttctttgtttcctattgctattcatcttgctagaggaaattctattgctttggcaccggctgttttagctagcatatataaggatttaagcg |
26354847 |
T |
|
| Q |
124 |
tgtttaagaacacagttgttgatttcaaaaaatttcctg---------ataaatttccctttatgttggacgttaatgtacaatcacccttttacctggt |
214 |
Q |
| |
|
|||||||||| || |||||||||| |||||| ||| ||| || ||| |||| || |||| | | |||||||| |||||| |||| |
|
|
| T |
26354846 |
tgtttaagaaaaccattgttgatttgtcaaaattatctgttggtggtgatagatatcc-ttta-----gaagttactcttcaatcaccgttttacttggt |
26354753 |
T |
|
| Q |
215 |
tcaagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgagcaataatcgagaccatgtattgttgagatggcataatgttaaggcc |
314 |
Q |
| |
|
|||| ||||||| ||||| ||||||||||| || || || ||||||| ||||| ||| | |||||| | ||||||| |||||||||| || | ||| |
|
|
| T |
26354752 |
tcaaatttgggtgtgggagaggttcaaaaaattacaaccgcaacccatgttgatcaaccgtggagaccctttattgtttagatggcatagggtacaagcc |
26354653 |
T |
|
| Q |
315 |
ttgaaaattgacaatgtgaggttggcattagactcagccatcgatgattttatttggcgtccttatgttcaatatgttgataagtgtggagtgttttatc |
414 |
Q |
| |
|
||||||||||||||||| | | ||| |||||||| || ||| |||||||| |||||||||| ||| || ||||| ||| | ||||| || ||||||| |
|
|
| T |
26354652 |
ttgaaaattgacaatgttaagctggaattagacttggctatcaatgattttctttggcgtccatattttagatatgcagatgaatgtggtgtattttatc |
26354553 |
T |
|
| Q |
415 |
caaaggatgaaactttggtaccatttaagaaagatttggtagtagaacaaatgctctcatttgctatat |
483 |
Q |
| |
|
|||| |||| || || ||||||||||||||||||||||| || |||||||||||||||||| ||||| |
|
|
| T |
26354552 |
caaatgatgcaatttcggtaccatttaagaaagatttgg--ata-aacaaatgctctcatttgttatat |
26354487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 24 - 133
Target Start/End: Original strand, 9815133 - 9815242
Alignment:
| Q |
24 |
gtgaaatgttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataaggatttaaggt |
123 |
Q |
| |
|
|||||| ||||||||||| || ||||| ||||||| |||||||| ||| ||||| |||||||||| |||||||| ||||| | ||||| |||||||| | |
|
|
| T |
9815133 |
gtgaaaagttctttgttttctattgctattcatcttgctagaggaaattctattgctttggcaccagctgttttagctagtatttataacgatttaagtt |
9815232 |
T |
|
| Q |
124 |
tgtttaagaa |
133 |
Q |
| |
|
|||||||||| |
|
|
| T |
9815233 |
tgtttaagaa |
9815242 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 93; Significance: 4e-45; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 33 - 483
Target Start/End: Original strand, 1717319 - 1717778
Alignment:
| Q |
33 |
tctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataaggatttaaggttgtttaaga |
132 |
Q |
| |
|
|||||||||||| ||||||||||||| |||||||| ||||||||| |||||||||| |||||||| |||||| ||||||||||||||| |||||||||| |
|
|
| T |
1717319 |
tctttgtttcctattgctgttcatcttgctagaggaaatcctattgctttggcaccggctgttttagctagcatatataaggatttaactttgtttaaga |
1717418 |
T |
|
| Q |
133 |
acacagttgttgatttcaaaaaatttcctgataaatttccctttatgtt----ggacgttaatgtacaatcacccttttacctggttcaagtttgggttt |
228 |
Q |
| |
|
| ||| | |||| ||| ||||| ||||| | | | | || || ||| |||| | | ||||||||||||||| |||||||| ||||||| | |
|
|
| T |
1717419 |
aaacaatagttggtttgtcaaaatatcctgttgg-tggcgatagattttctaaggaggttagtcttcaatcacccttttacttggttcaaatttgggtgt |
1717517 |
T |
|
| Q |
229 |
gggaaaggttcaaaaatttgcagccacaac------ccaagttgagcaataatcgagaccatgtattgttgagatggcataatgttaaggccttgaaaat |
322 |
Q |
| |
|
|| ||||||||||| ||| || |||||| ||| | ||| ||| | |||||| | | | ||| || |||| || ||| | ||||||||| |
|
|
| T |
1717518 |
tgggaaggttcaaaagtttacaatcacaactaaaaaccacgatgaccaaccacggagaccctttttggtttaggtggcgtatgagtaaagacttgaaaat |
1717617 |
T |
|
| Q |
323 |
tgacaatgtgaggttggcattagactcagccatcgatgattttatttggcgtccttatgttcaatatgttgataagtgtggagtgttttatccaaaggat |
422 |
Q |
| |
|
||| |||| |||||| ||||||||||||| || |||||||||||||||||||| |||||| ||||| ||||||| ||||| ||||||||||| | ||| |
|
|
| T |
1717618 |
tgaagatgttaggttgacattagactcagctattgatgattttatttggcgtccatatgttagatatgctgataagcgtggaatgttttatccatatgat |
1717717 |
T |
|
| Q |
423 |
gaaactttggtaccatttaagaaagatttggtagtagaacaaatgctctcatttgctatat |
483 |
Q |
| |
|
|||| ||||||||||||||||||||||||||| | ||||||||||| ||||||| ||||| |
|
|
| T |
1717718 |
gaaattttggtaccatttaagaaagatttggtggatgaacaaatgctgtcatttgttatat |
1717778 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 483
Target Start/End: Original strand, 38483409 - 38483531
Alignment:
| Q |
358 |
atgattttatttggcgtccttatgttcaatatgttgataagtgtggagtgttttatccaaaggatgaaactttggtaccatttaagaaagatttggtagt |
457 |
Q |
| |
|
|||||||| ||| |||||| ||| || ||||| |||||||||||| ||||||||| ||| |||| | ||||||||| ||||||||| |||||| | |
|
|
| T |
38483409 |
atgattttctttagcgtccatattttagatatgatgataagtgtggtttgttttatcaaaatgatgcacttttggtaccgtttaagaaatatttgg--at |
38483506 |
T |
|
| Q |
458 |
agaacaaatgctctcatttgctatat |
483 |
Q |
| |
|
| |||||||||||||||||| ||||| |
|
|
| T |
38483507 |
a-aacaaatgctctcatttgttatat |
38483531 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 329 - 453
Target Start/End: Complemental strand, 39191724 - 39191598
Alignment:
| Q |
329 |
tgtgaggttggcattagactcagccatcgatgattttatttggcgtccttatgttcaatatgttgataa-gtgtggag-tgttttatccaaaggatgaaa |
426 |
Q |
| |
|
||||||||||||||| || || || | ||||||||| |||||||||| ||||||||||||| |||||| |||| || ||||||||||||||||||||| |
|
|
| T |
39191724 |
tgtgaggttggcattggattcggctaaggatgattttctttggcgtccatatgttcaatatgctgataaagtgtagaaatgttttatccaaaggatgaaa |
39191625 |
T |
|
| Q |
427 |
ctttggtaccatttaagaaagatttgg |
453 |
Q |
| |
|
|||||||||| ||||||| ||||||| |
|
|
| T |
39191624 |
ctttggtaccgcttaagaaggatttgg |
39191598 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 301 - 453
Target Start/End: Complemental strand, 6397478 - 6397324
Alignment:
| Q |
301 |
ataatgttaaggccttgaaaattgacaatgtgaggttggcattagactcagccatcgatgattttatttggcgtccttatgttcaatatgttgataagtg |
400 |
Q |
| |
|
|||| ||| ||||||| |||||||||||| | | |||||||| ||||||| | ||||| ||||| |||||||||| |||||| |||| ||| ||||| |
|
|
| T |
6397478 |
ataaggttcaggcctttaaaattgacaatattaagttggcatgagactcaactgtcgataattttctttggcgtccatatgttagatatcctgagaagtg |
6397379 |
T |
|
| Q |
401 |
tggagt--gttttatccaaaggatgaaactttggtaccatttaagaaagatttgg |
453 |
Q |
| |
|
|||| | ||||||||||| | |||| ||||||||||||||||| ||||||| |
|
|
| T |
6397378 |
tggaattctttttatccaaataacgaaatcttggtaccatttaagaaggatttgg |
6397324 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 133
Target Start/End: Original strand, 6398357 - 6398468
Alignment:
| Q |
24 |
gtgaaatgttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttata--taaggatttaag |
121 |
Q |
| |
|
|||||| ||| ||||||| || |||||||| |||| |||||||| ||||| || ||||||||| |||||||| |||||| |||| ||||||||||| |
|
|
| T |
6398357 |
gtgaaaagttgtttgttttctattgctgttaatctcgctagaggaaatccaatcggtttggcaccagctgttttagctagcatatatataaggatttaac |
6398456 |
T |
|
| Q |
122 |
gttgtttaagaa |
133 |
Q |
| |
|
|| |||||||| |
|
|
| T |
6398457 |
tttatttaagaa |
6398468 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 50 - 148
Target Start/End: Complemental strand, 6397732 - 6397634
Alignment:
| Q |
50 |
tgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataaggatttaaggttgtttaagaacacagttgttgattt |
148 |
Q |
| |
|
|||| |||| ||||||| ||||| ||| |||||||||| |||||||||||| | |||||||||||||| || |||||||| ||| || ||||||| |
|
|
| T |
6397732 |
tgttaatcttgctagagaaaatccaattgctttggcaccatctgttttggctatcatatataaggatttatctttatttaagaaaacaattattgattt |
6397634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 198 - 267
Target Start/End: Original strand, 6398537 - 6398606
Alignment:
| Q |
198 |
tcacccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttga |
267 |
Q |
| |
|
||||| |||||| |||||||||||| ||| ||||| ||||||| ||| ||||| ||||||| || ||||| |
|
|
| T |
6398537 |
tcacctttttacgtggttcaagtttaggtgtgggagaggttcacaaacttgcaaccacaactcatgttga |
6398606 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 32; Significance: 0.00000001; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 453
Target Start/End: Complemental strand, 12495734 - 12495578
Alignment:
| Q |
301 |
ataatgttaaggccttgaaaattgacaatgtgaggttggcattagactcagccatcgatgattttatttggcgtccttatgttcaatatgttgataagtg |
400 |
Q |
| |
|
|||| ||| |||||||| ||||||||||||| ||| |||||||||||| || |||||||| |||||||||| |||| | |||| ||| ||||| |
|
|
| T |
12495734 |
ataaggttcaggccttgcaaattgacaatgttcagtttgcattagactcaagtgtcaatgattttctttggcgtccatatgctagatatcctgagaagtg |
12495635 |
T |
|
| Q |
401 |
tgga----gtgttttatccaaaggatgaaactttggtaccatttaagaaagatttgg |
453 |
Q |
| |
|
|||| | ||||||||||| |||||| || ||||||||||||||| ||||||| |
|
|
| T |
12495634 |
tggaattttttttttatccaaataatgaaatttgggtaccatttaagaaggatttgg |
12495578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 198 - 331
Target Start/End: Original strand, 12497482 - 12497614
Alignment:
| Q |
198 |
tcacccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgagcaataatcgagaccatgtattgttgagat |
297 |
Q |
| |
|
||||| |||||| ||||||| ||||||||| |||| ||| || ||| ||||| ||||||| || ||||| ||| | ||| ||| |||||||||| | |
|
|
| T |
12497482 |
tcacctttttacttggttcatgtttgggtt-gggagaggctcgcaaacttgcaaccacaactcatgttgatcaaccacatagaacatttattgttgaggt |
12497580 |
T |
|
| Q |
298 |
ggcataatgttaaggccttgaaaattgacaatgt |
331 |
Q |
| |
|
||||||| ||| |||||||||||||| |||||| |
|
|
| T |
12497581 |
ggcataaggttctggccttgaaaattggcaatgt |
12497614 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 198 - 331
Target Start/End: Original strand, 12521347 - 12521479
Alignment:
| Q |
198 |
tcacccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgagcaataatcgagaccatgtattgttgagat |
297 |
Q |
| |
|
||||| |||||| ||||||| ||||||||| |||| ||| || ||| ||||| ||||||| || ||||| ||| | ||| ||| |||||||||| | |
|
|
| T |
12521347 |
tcacctttttacttggttcatgtttgggtt-gggagaggctcgcaaacttgcaaccacaactcatgttgatcaaccacatagaacatttattgttgaggt |
12521445 |
T |
|
| Q |
298 |
ggcataatgttaaggccttgaaaattgacaatgt |
331 |
Q |
| |
|
||||||| ||| |||||||||||||| |||||| |
|
|
| T |
12521446 |
ggcataaggttctggccttgaaaattggcaatgt |
12521479 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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