View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14642_high_35 (Length: 263)
Name: NF14642_high_35
Description: NF14642
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14642_high_35 |
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Alignment Details
Target: chr5 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 2587892 - 2587644
Alignment:
| Q |
1 |
gtgagatgaacggaaaaatcagttcgttgtattatgatttaagcaagctcaaactactaattattttgacttgattgttgtcttcatttaattaagaagg |
100 |
Q |
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| T |
2587892 |
gtgagaaggacggaaaaatcagttcgttgtattatgatttaagcaagctcaaactactaattattttgacttgattgttgtcttcatttaattaagaagg |
2587793 |
T |
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| Q |
101 |
aataatttcattaatgttgttgtcataacgtgtattatagttaatgccttatatatgacctgtaaatttaatttaattggttgattacacaggttatgag |
200 |
Q |
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| T |
2587792 |
aataatttcattaatgttgttgtcataacgtgtattatagttaatgccttatatatgacctgtaaatttaatttaattggttgattacacaggttatgag |
2587693 |
T |
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| Q |
201 |
ctcaaattaattattatatacccaataaatgttataatcattttatttt |
249 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2587692 |
ctcaaattaattattatatacccaataaatgttataatcattttatttt |
2587644 |
T |
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