View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14642_high_42 (Length: 251)

Name: NF14642_high_42
Description: NF14642
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14642_high_42
NF14642_high_42
[»] chr1 (2 HSPs)
chr1 (11-237)||(27301932-27302160)
chr1 (13-237)||(20572499-20572725)
[»] chr7 (3 HSPs)
chr7 (13-237)||(43941572-43941798)
chr7 (13-237)||(17364814-17365044)
chr7 (13-237)||(41678985-41679211)
[»] chr5 (6 HSPs)
chr5 (33-237)||(25072959-25073165)
chr5 (33-237)||(25130930-25131136)
chr5 (13-237)||(26700544-26700774)
chr5 (13-237)||(26970277-26970507)
chr5 (13-234)||(40690079-40690306)
chr5 (13-234)||(19545319-19545542)
[»] chr3 (1 HSPs)
chr3 (13-234)||(16367920-16368143)
[»] chr6 (3 HSPs)
chr6 (34-237)||(24498290-24498495)
chr6 (20-206)||(12314144-12314329)
chr6 (13-206)||(12285788-12285980)
[»] chr8 (2 HSPs)
chr8 (50-237)||(5660158-5660347)
chr8 (13-234)||(18559433-18559657)
[»] chr2 (1 HSPs)
chr2 (13-234)||(26222947-26223170)


Alignment Details
Target: chr1 (Bit Score: 198; Significance: 1e-108; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 11 - 237
Target Start/End: Complemental strand, 27302160 - 27301932
Alignment:
Q  11 tagataatactgtctttcaagcttttactttgattataacttttactttgcttaggttcttgaattggcaataatatcttgcttaatatgagttaacaat 110  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27302160 tagataatactgtctttcaagcttttactttgataataacttttactttgcttaggttcttgaattggcaataatatcttgcttaatatgagttaacaat 27302061  T
Q  111 tataatattttccgcaggcatcaaacataggaagtgaatctccaacacccaatgacataactagatcatcagatgaaagcaacgcacgtggagcat--ga 208  Q
    ||||||||||| |||||||||||||| | |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  ||    
T  27302060 tataatatttttcgcaggcatcaaacgttggaagtgaatctccaacaaccaatgacataactagatcatcagatgaaagcaacgcacgtggagcatgaga 27301961  T
Q  209 gtcctaattttagtgacatcagttgtcta 237  Q
    |||||||||||||||||||||||||||||    
T  27301960 gtcctaattttagtgacatcagttgtcta 27301932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 13 - 237
Target Start/End: Complemental strand, 20572725 - 20572499
Alignment:
Q  13 gataatactgtctttcaagcttttactttgattataacttttactttgcttaggttcttgaattggcaataatatcttgcttaatatgagttaacaatta 112  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20572725 gataatactgtctttcaagcttttactttcataataacttttactttgcttaggttcttgaattggcaataatatcttgcttaatatgagttaacaatta 20572626  T
Q  113 taatattttccgcaggcatcaaacataggaagtgaatctccaacacccaatgacataactagatcatcagatgaaagcaacgcacgtggagcat--gagt 210  Q
    |||||||||  ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||  ||||    
T  20572625 taatattttttgcaggcatcaaacgtaggaaatgaatctccaacacccaatgacataactagatcatcagatgaaagcaatgcacgtcgagcatgagagt 20572526  T
Q  211 cctaattttagtgacatcagttgtcta 237  Q
    |||||||||||||||||||||||||||    
T  20572525 cctaattttagtgacatcagttgtcta 20572499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 184; Significance: 1e-99; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 13 - 237
Target Start/End: Original strand, 43941572 - 43941798
Alignment:
Q  13 gataatactgtctttcaagcttttactttgattataacttttactttgcttaggttcttgaattggcaataatatcttgcttaatatgagttaacaatta 112  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  43941572 gataatactgtctttcaagcttttactttgataataacttttactttgcttaggttcttgaattggcaataatatctagcttaatatgagttaacaatta 43941671  T
Q  113 taatattttccgcaggcatcaaacataggaagtgaatctccaacacccaatgacataactagatcatcagatgaaagcaacgcacgtggagcat--gagt 210  Q
    |||||||||  ||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||  ||||    
T  43941672 taatattttttgcaggcatcaaatgtaggaagtgaatctccaacacccaataacataactagatcatcagatgaaagcaacgcacgtcgagcatgagagt 43941771  T
Q  211 cctaattttagtgacatcagttgtcta 237  Q
    |||||||||||||||||||||||||||    
T  43941772 cctaattttagtgacatcagttgtcta 43941798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 13 - 237
Target Start/End: Complemental strand, 17365044 - 17364814
Alignment:
Q  13 gataatactgtctttcaagcttttactttgattataacttttactttgcttaggttcttgaattggcaataatatcttgcttaatat----gagttaaca 108  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||||    
T  17365044 gataatactgtctttcaagcttttactttgataataacttttactttgcttaggttcttgaattggcaataatatcttgcttaatatataggagttaaca 17364945  T
Q  109 attataatattttccgcaggcatcaaacataggaagtgaatctccaacacccaatgacataactagatcatcagatgaaagcaacgcacgtggagcat-- 206  Q
    ||||||||| |||   |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  17364944 attataatactttttacaggcatcaaacgtaggaagtgaatctccaacacccaatgacataactagatcatcagatgaaagcaacgcacgtggagcatga 17364845  T
Q  207 gagtcctaattttagtgacatcagttgtcta 237  Q
    |||||||||||||||||||||||||||||||    
T  17364844 gagtcctaattttagtgacatcagttgtcta 17364814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 13 - 237
Target Start/End: Complemental strand, 41679211 - 41678985
Alignment:
Q  13 gataatactgtctttcaagcttttactttgattataacttttactttgcttaggttcttgaattggcaataatatcttgcttaatatgagttaacaatta 112  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  41679211 gataatactgtctttcaagcttttactttgataataacttttactttgattaggttcttgaattggcaataatatcttgcttaataggagttaacaatta 41679112  T
Q  113 taatattttccgcaggcatcaaacataggaagtgaatctccaacacccaatgacataactagatcatcagatgaaagcaacgcacgtggagcat--gagt 210  Q
    ||||| |||  |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||    
T  41679111 taatactttttgcagacatcaaacgtaggaagtgaatctccaacacccaatgacataactagatcatcagatgaaagcaacgcacgtagagcatgagagt 41679012  T
Q  211 cctaattttagtgacatcagttgtcta 237  Q
    ||||||||||||||||| |||||||||    
T  41679011 cctaattttagtgacattagttgtcta 41678985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 176; Significance: 6e-95; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 33 - 237
Target Start/End: Original strand, 25072959 - 25073165
Alignment:
Q  33 ttttactttgattataacttttactttgcttaggttcttgaattggcaataatatcttgcttaatatgagttaacaattataatattttccgcaggcatc 132  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  25072959 ttttactttgataataacttttactttgcttaggttcttgaattggcaataatatcttgcttaatatgagttaacaattataatatttttctcaggcatc 25073058  T
Q  133 aaacataggaagtgaatctccaacacccaatgacataactagatcatcagatgaaagcaacgcacgtggagcat--gagtcctaattttagtgacatcag 230  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  25073059 aaacgtaggaagtgaatctccaacacacaatgacataactagatcatcagatgaaagcaacgcacgtggagcatgagagtcctaattttagtgacatcag 25073158  T
Q  231 ttgtcta 237  Q
    |||||||    
T  25073159 ttgtcta 25073165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 33 - 237
Target Start/End: Original strand, 25130930 - 25131136
Alignment:
Q  33 ttttactttgattataacttttactttgcttaggttcttgaattggcaataatatcttgcttaatatgagttaacaattataatattttccgcaggcatc 132  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  25130930 ttttactttgataataacttttactttgcttaggttcttgaattggcaataatatcttgcttaatatgagttaacaattataatatttttctcaggcatc 25131029  T
Q  133 aaacataggaagtgaatctccaacacccaatgacataactagatcatcagatgaaagcaacgcacgtggagcat--gagtcctaattttagtgacatcag 230  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  25131030 aaacgtaggaagtgaatctccaacacacaatgacataactagatcatcagatgaaagcaacgcacgtggagcatgagagtcctaattttagtgacatcag 25131129  T
Q  231 ttgtcta 237  Q
    |||||||    
T  25131130 ttgtcta 25131136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 13 - 237
Target Start/End: Original strand, 26700544 - 26700774
Alignment:
Q  13 gataatactgtctttcaagcttttactttgattataacttttactttgcttaggttcttgaattggcaataatatcttgcttaatat----gagttaaca 108  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||||    
T  26700544 gataatactgtctttcaagcttttattttgataataacttttactttgcttaggttcttgaattggcaataatatcttgcttaatatataggagttaaca 26700643  T
Q  109 attataatattttccgcaggcatcaaacataggaagtgaatctccaacacccaatgacataactagatcatcagatgaaagcaacgcacgtggagcat-- 206  Q
    ||||||||| |||   |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||      
T  26700644 attataatactttttacaggcatcaaacgtaggaagtgaatctccaacacccaatgacataactagatcatcagatgaaagcaacgcaagtggagcatga 26700743  T
Q  207 gagtcctaattttagtgacatcagttgtcta 237  Q
    |||||||||||||||||||||||||||||||    
T  26700744 gagtcctaattttagtgacatcagttgtcta 26700774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 13 - 237
Target Start/End: Original strand, 26970277 - 26970507
Alignment:
Q  13 gataatactgtctttcaagcttttactttgattataacttttactttgcttaggttcttgaattggcaataatatcttgcttaatat----gagttaaca 108  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||||    
T  26970277 gataatactgtctttcaagcttttattttgataataacttttactttgcttaggttcttgaattggcaataatatcttgcttaatatataggagttaaca 26970376  T
Q  109 attataatattttccgcaggcatcaaacataggaagtgaatctccaacacccaatgacataactagatcatcagatgaaagcaacgcacgtggagcat-- 206  Q
    ||||||||| |||   |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||      
T  26970377 attataatactttttacaggcatcaaacgtaggaagtgaatctccaacacccaatgacataactagatcatcagatgaaagcaacgcaagtggagcatga 26970476  T
Q  207 gagtcctaattttagtgacatcagttgtcta 237  Q
    |||||||||||||||||||||||||||||||    
T  26970477 gagtcctaattttagtgacatcagttgtcta 26970507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 13 - 234
Target Start/End: Original strand, 40690079 - 40690306
Alignment:
Q  13 gataatactgtctttcaagcttttactttgattataacttttactttgcttaggttcttgaattggcaataatatcttgcttaatatgagttaacaatta 112  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  40690079 gataatactgtctttcaagcttttactttgataataacttttactttgcttaggttgttgaattggcaataatatcttgcttaatatgagttaacaatta 40690178  T
Q  113 taatat----tttccgcaggcatcaaacataggaagtgaatctccaacacccaatgacataactagatcatcagatgaaagcaacgcacgtggagcat-- 206  Q
    ||||||    |||  | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||      
T  40690179 taatatatattttttggaggcatcaaacgtaggaagtgaatctccaacacccaatgacataactagatcatcagatgaaagcaatgcatgtggagcatga 40690278  T
Q  207 gagtcctaattttagtgacatcagttgt 234  Q
    ||| ||||||||||||||||||| ||||    
T  40690279 gagccctaattttagtgacatcatttgt 40690306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 13 - 234
Target Start/End: Original strand, 19545319 - 19545542
Alignment:
Q  13 gataatactgtctttcaagcttttactttgattataacttttactttgcttaggttcttgaattggcaataatatcttgcttaatatgagttaacaatta 112  Q
    ||||||||||||||   ||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  19545319 gataatactgtcttatgagcttttactttgataataacttttactttgcttaggttgttgaattgacaataatatcttgcttaatatgagttaacaatta 19545418  T
Q  113 taatattttccgcaggcatcaaacataggaagtgaatctccaacacccaatgacataactagatcatcagatgaaagcaacgcacgtggagcat--gagt 210  Q
    |||||||||  ||||||||||||  ||||||||| |||||||||||| |||||||||||||||||||||||||||||||| ||| || ||||||  ||||    
T  19545419 taatattttttgcaggcatcaaatgtaggaagtggatctccaacaccgaatgacataactagatcatcagatgaaagcaatgcatgttgagcatgagagt 19545518  T
Q  211 cctaattttagtgacatcagttgt 234  Q
    ||||||||||||||||||||||||    
T  19545519 cctaattttagtgacatcagttgt 19545542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 173; Significance: 4e-93; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 13 - 234
Target Start/End: Complemental strand, 16368143 - 16367920
Alignment:
Q  13 gataatactgtctttcaagcttttactttgattataacttttactttgcttaggttcttgaattggcaataatatcttgcttaatatgagttaacaatta 112  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  16368143 gataatactgtctttcaagcttttactttgataataacttttactttgcttaggttgttgaattagcaataatatcttgcttaatatgagttaacaatta 16368044  T
Q  113 taatattttccgcaggcatcaaacataggaagtgaatctccaacacccaatgacataactagatcatcagatgaaagcaacgcacgtggagcat--gagt 210  Q
    |||||||||  ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||  ||||    
T  16368043 taatattttttgcaggcatcaaacgtaggaagtgaatctccaacacccaatgacataactagatcatcagatgacagcaatgcacgtggagcatgagagt 16367944  T
Q  211 cctaattttagtgacatcagttgt 234  Q
    ||| ||||||||||||||| ||||    
T  16367943 cctcattttagtgacatcatttgt 16367920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 171; Significance: 6e-92; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 34 - 237
Target Start/End: Complemental strand, 24498495 - 24498290
Alignment:
Q  34 tttactttgattataacttttactttgcttaggttcttgaattggcaataatatcttgcttaatatgagttaacaattataatattttccgcaggcatca 133  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  24498495 tttactttgataataacttttactttgcttaggttcttgaattggcaataatatcttgcttaatatgagttaacaattataatatttttcgcaggtatca 24498396  T
Q  134 aacataggaagtgaatctccaacacccaatgacataactagatcatcagatgaaagcaacgcacgtggagcat--gagtcctaattttagtgacatcagt 231  Q
    ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||    
T  24498395 aacgtaggaagtgaatctccaacatccaatgacataactagatcatcagatgaaagcaacgcacgtggagcatgagagtcctaattttattgacatcagt 24498296  T
Q  232 tgtcta 237  Q
    ||||||    
T  24498295 tgtcta 24498290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 20 - 206
Target Start/End: Complemental strand, 12314329 - 12314144
Alignment:
Q  20 ctgtctttcaagcttttactttgattataacttttactttgcttaggttcttgaattggcaataatatcttgcttaatatgagttaacaattataatatt 119  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||   ||||||||||| ||||||||||||| |||||||    
T  12314329 ctgtctttcaagcttttactttgat-ataacttttactttgcttaggttgttgaattggcaatatcttcttgcttaatttgagttaacaattgtaatatt 12314231  T
Q  120 ttccgcaggcatcaaacataggaagtgaatctccaacacccaatgacataactagatcatcagatgaaagcaacgcacgtggagcat 206  Q
    ||   | |||||||||| |||||||||||| | ||||||| ||| ||||||||||||||||||||| |||||| |||| ||||||||    
T  12314230 ttttaccggcatcaaacgtaggaagtgaatattcaacaccaaataacataactagatcatcagatgcaagcaatgcacatggagcat 12314144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 12285980 - 12285788
Alignment:
Q  13 gataatactgtctttcaagcttttactttgattataacttttactttgcttaggttcttgaattggcaataatatcttgcttaatatgagttaacaatta 112  Q
    |||||| ||||||||||||||||||||| ||| |||||||||| |||||||||||| ||||||||||||||   ||||||||||| |||||||||||||     
T  12285980 gataattctgtctttcaagcttttacttagat-ataacttttagtttgcttaggttgttgaattggcaatatcttcttgcttaatctgagttaacaattg 12285882  T
Q  113 taatattttccgcaggcatcaaacataggaagtgaatctccaacacccaatgacataactagatcatcagatgaaagcaacgcacgtggagcat 206  Q
    |||||||||  || || |||||||  ||||||||||||| |||| || ||| ||||||||||||||||| ||| |||||| |||| ||||||||    
T  12285881 taatattttttgccggaatcaaacgcaggaagtgaatcttcaaccccaaataacataactagatcatcatatgcaagcaatgcacatggagcat 12285788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 163; Significance: 4e-87; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 50 - 237
Target Start/End: Original strand, 5660158 - 5660347
Alignment:
Q  50 cttttactttgcttaggttcttgaattggcaataatatcttgcttaatatgagttaacaattataatattttccgcaggcatcaaacataggaagtgaat 149  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  5660158 cttttactttgcttaggtttttgaattggcaataatatcttgcttaatatgagttaacaattataatatttttcgcaggcatcaaacgtaggaagtgaat 5660257  T
Q  150 ctccaacacccaatgacataactagatcatcagatgaaagcaacgcacgtggagcat--gagtcctaattttagtgacatcagttgtcta 237  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||    
T  5660258 ctccaacacccaatgacataactagatcatcagatgaaagcaacgcacgtggagcatgagagtcctaattttagtgacataagttgtcta 5660347  T

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Target: chr8; HSP #2
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 13 - 234
Target Start/End: Complemental strand, 18559657 - 18559433
Alignment:
Q  13 gataatactgtctttcaagcttttactttgattataacttttactttgcttaggttcttgaattggcaataatatcttgcttaatatgagttaacaatta 112  Q
    ||||||| ||||||||||| |||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  18559657 gataatattgtctttcaagattttactttgataataacatttactttgcttaggttgttgaattggcaataatatcttgcttaatatgagttaacaatta 18559558  T
Q  113 taata-ttttccgcaggcatcaaacataggaagtgaatctccaacacccaatgacataactagatcatcagatgaaagcaacgcacgtggagcat--gag 209  Q
    ||||| ||||  ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||||  |||    
T  18559557 taatatttttttgcaggcatcaaacgtaggaagtgaatcttcaacacccaatgacataactagatcatcagatgaaaacaatgcacgtggagcatgagag 18559458  T
Q  210 tcctaattttagtgacatcagttgt 234  Q
    |||||||||||||||||| ||||||    
T  18559457 tcctaattttagtgacatgagttgt 18559433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 149; Significance: 8e-79; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 13 - 234
Target Start/End: Original strand, 26222947 - 26223170
Alignment:
Q  13 gataatactgtctttcaagcttttactttgattataacttttactttgcttaggttcttgaattggcaataatatcttgcttaatatgagttaacaatta 112  Q
    ||||||||||||||   | ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  26222947 gataatactgtcttatgatcttttactttgataataacttttactttgcttaggttgttgaattggcaataatatcttgcttaatatgagttagcaatta 26223046  T
Q  113 taatattttccgcaggcatcaaacataggaagtgaatctccaacacccaatgacataactagatcatcagatgaaagcaacgcacgtggagcat--gagt 210  Q
    |||||||||  ||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| || ||||||  ||||    
T  26223047 taatattttttgcaggcatcaaatgtaggaagtggatctccaacacccaatgacataactagatcatcagatgaaagcaatgcatgttgagcatgagagt 26223146  T
Q  211 cctaattttagtgacatcagttgt 234  Q
    || |||||||||||||||||||||    
T  26223147 ccaaattttagtgacatcagttgt 26223170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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