View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14642_high_56 (Length: 227)
Name: NF14642_high_56
Description: NF14642
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14642_high_56 |
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Alignment Details
Target: chr8 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 18 - 213
Target Start/End: Complemental strand, 43020425 - 43020230
Alignment:
| Q |
18 |
aatttatacatgttgtattcaaaattaaagattactgaaaatattcggataggaaaatttgaaatcagctccctctacacgtagatgccttcaaacattg |
117 |
Q |
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| T |
43020425 |
aatttatacatgttgtattcaaaattaaagattactgaaaatattcggataggaaaatttgaaatcaactccctctacacgtagatgccttcaaacattg |
43020326 |
T |
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| Q |
118 |
ataagaagttaaaattcaaaacagaaaagatagtgtgtgtcgtttgtgccctttggtcagtgaatgatggacccataaaaactaaaagatattctt |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43020325 |
ataagaagttaaaattcaaaacagaaaagatagtgtgtgtcgtttgtgccctatggtcagtgaatgatggacccataaaaactaaaagatattctt |
43020230 |
T |
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