View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14642_low_35 (Length: 284)
Name: NF14642_low_35
Description: NF14642
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14642_low_35 |
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Alignment Details
Target: chr6 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 17 - 266
Target Start/End: Original strand, 2133825 - 2134074
Alignment:
| Q |
17 |
aatatggctcaaaagttctggagaaaagtcgtcaccgcaactgcttatattctaaacaaatgtattaccgagaagctaaaattaaaggtacccgaggaag |
116 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2133825 |
aatatggctcaaaagttctggagaaaagtcgtcaccgcaactgcttatattctaaacaaatgtattaccgagaagctaaaattaaaggtacccgaggaag |
2133924 |
T |
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| Q |
117 |
catagagtggaagaaaatcaagtgtgaagcatctaagggtgtttgggttagtgtgtttcaaggagatacctgatgctaggaggatgttagaagataaaag |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2133925 |
catagagtggaagaaaatcaagtgtgaagcatctaagggtgtttgggttagtgtgtttcaaggagatacctgatgctaggaggatgttagaagataaaag |
2134024 |
T |
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| Q |
217 |
tgaaagcatggagctcatatggtatcattcaactggtgtctatatgttgt |
266 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2134025 |
tgaaagcatggagctcatatggtatcattcaactggtgtctatatgttgt |
2134074 |
T |
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