View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14642_low_38 (Length: 277)

Name: NF14642_low_38
Description: NF14642
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14642_low_38
NF14642_low_38
[»] chr2 (24 HSPs)
chr2 (34-245)||(39136173-39136384)
chr2 (102-242)||(39458169-39458309)
chr2 (56-241)||(39474250-39474435)
chr2 (56-243)||(39422460-39422647)
chr2 (56-243)||(39416343-39416530)
chr2 (146-243)||(39129487-39129584)
chr2 (56-243)||(39488161-39488348)
chr2 (145-226)||(39601994-39602075)
chr2 (141-243)||(39151897-39151999)
chr2 (156-242)||(39123536-39123622)
chr2 (140-210)||(44623617-44623687)
chr2 (142-214)||(39214925-39214997)
chr2 (142-218)||(39450499-39450575)
chr2 (102-216)||(27154981-27155095)
chr2 (145-214)||(39382213-39382282)
chr2 (146-223)||(39495534-39495611)
chr2 (142-214)||(39199482-39199554)
chr2 (142-214)||(39399013-39399085)
chr2 (142-213)||(39220162-39220233)
chr2 (155-214)||(39391666-39391725)
chr2 (148-190)||(39479182-39479224)
chr2 (142-212)||(44614473-44614543)
chr2 (154-214)||(39161102-39161162)
chr2 (154-214)||(39208032-39208092)
[»] chr7 (1 HSPs)
chr7 (56-243)||(19806556-19806743)
[»] chr8 (1 HSPs)
chr8 (141-212)||(44951384-44951455)
[»] chr5 (1 HSPs)
chr5 (155-214)||(33559636-33559695)
[»] chr6 (1 HSPs)
chr6 (146-184)||(16112428-16112466)


Alignment Details
Target: chr2 (Bit Score: 212; Significance: 1e-116; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 34 - 245
Target Start/End: Original strand, 39136173 - 39136384
Alignment:
Q  34 atgatgatgatgacgacgacgacatgtcaactgataaatcattttccacactcaaagaaaaacttgtgttggtagaaaaatcatttgaggatatcagaag 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39136173 atgatgatgatgacgacgacgacatgtcaactgataaatcattttccacactcaaagaaaaacttgtgttggtagaaaaatcatttgaggatatcagaag 39136272  T
Q  134 caagacacaagtagaagagaggagattgcagtccataaagagagatattgaggagtgctgcgaagatcttgaaaataagaaaaaggaaattagggatgtt 233  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39136273 caagacacaagtagaagagaggagattgcagtccataaagagagatattgaggagtgctgcgaagatcttgaaaataagaaaaaggaaattagggatgtt 39136372  T
Q  234 ggaagaattatc 245  Q
    ||||||||||||    
T  39136373 ggaagaattatc 39136384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 102 - 242
Target Start/End: Original strand, 39458169 - 39458309
Alignment:
Q  102 ttggtagaaaaatcatttgaggatatcagaagcaagacacaagtagaagagaggagattgcagtccataaagagagatattgaggagtgctgcgaagatc 201  Q
    ||||||||||||||||||||||||  || ||| | || |||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  39458169 ttggtagaaaaatcatttgaggattgcaaaaggacgagacaagtagaagagaagagattgcagtccataaagagagatattgaggagtgctgcaaagatc 39458268  T
Q  202 ttgaaaataagaaaaaggaaattagggatgttggaagaatt 242  Q
    ||||||| ||||||||||||| ||   ||||||||||||||    
T  39458269 ttgaaaacaagaaaaaggaaactatttatgttggaagaatt 39458309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 56 - 241
Target Start/End: Complemental strand, 39474435 - 39474250
Alignment:
Q  56 catgtcaactgataaatcattttccacactcaaagaaaaacttgtgttggtagaaaaatcatttgaggatatcagaagcaagacacaagtagaagagagg 155  Q
    ||||||||| ||||||||||||||| |||||||  || ||||||  || |||||||||||||||||||||  |  ||| | ||| ||| ||||| ||  |    
T  39474435 catgtcaacggataaatcattttcctcactcaagaaagaacttgcatttgtagaaaaatcatttgaggattgccaaaggacgacgcaaatagaaaaggag 39474336  T
Q  156 agattgcagtccataaagagagatattgaggagtgctgcgaagatcttgaaaataagaaaaaggaaattagggatgttggaagaat 241  Q
    |||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||  |||||||||||||    
T  39474335 agattgcattccataaagagagatattgaggagtgctccgaagagcttgaaaataagaaaaagaaaattagtcatgttggaagaat 39474250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 56 - 243
Target Start/End: Complemental strand, 39422647 - 39422460
Alignment:
Q  56 catgtcaactgataaatcattttccacactcaaagaaaaacttgtgttggtagaaaaatcatttgaggatatcagaagc-aagacacaagtagaagagag 154  Q
    |||||||| ||||  |||||||||| |||||||| || ||||||  || |||||||||||||||||||| ||  ||||  || | | ||||||||||||     
T  39422647 catgtcaattgatctatcattttcctcactcaaaaaacaacttgcatttgtagaaaaatcatttgagga-atgtgaagggaaaagagaagtagaagagaa 39422549  T
Q  155 gagattgcagtccataaagagagatattgaggagtgctgcgaagatcttgaaaataagaaaaaggaaattagggatgttggaagaatta 243  Q
    || |||||||||||||||||||||||||||| |||||||| |||| || ||||||||||||||||||||||| ||||||||||||||||    
T  39422548 gatattgcagtccataaagagagatattgagaagtgctgcaaagagctggaaaataagaaaaaggaaattagtgatgttggaagaatta 39422460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 56 - 243
Target Start/End: Complemental strand, 39416530 - 39416343
Alignment:
Q  56 catgtcaactgataaatcattttccacactcaaagaaaaacttgtgttggtagaaaaatcatttgaggatatcagaagcaagacacaagtagaagagagg 155  Q
    ||||||||||||||||||| |||||  ||||||| || ||||||  ||  |||||||||||||||||||   ||||||  | |  ||||||||| ||| |    
T  39416530 catgtcaactgataaatcaatttccgaactcaaaaaagaacttgcatttatagaaaaatcatttgaggaacgcagaagggacatgcaagtagaaaagaag 39416431  T
Q  156 agattgcagtccataaagagagatattgaggagtgctgcgaagatcttgaaaataagaaaaaggaaattagggatgttggaagaatta 243  Q
    |||||||| ||||||||||||||||||||||||||||||  ||| |||||||||||| |||||||||||||  |||||||||||||||    
T  39416430 agattgcattccataaagagagatattgaggagtgctgcagagaacttgaaaataagcaaaaggaaattagttatgttggaagaatta 39416343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 146 - 243
Target Start/End: Original strand, 39129487 - 39129584
Alignment:
Q  146 agaagagaggagattgcagtccataaagagagatattgaggagtgctgcgaagatcttgaaaataagaaaaaggaaattagggatgttggaagaatta 243  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| | |||| |||||||||| ||||||||||||||| |||| |||||||||||    
T  39129487 agaagagaagagattgcagtccataaagagagatattgaggagtgctccaaagagcttgaaaatatgaaaaaggaaattagtgatgctggaagaatta 39129584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 56 - 243
Target Start/End: Complemental strand, 39488348 - 39488161
Alignment:
Q  56 catgtcaactgataaatcattttccacactcaaagaaaaacttgtgttggtagaaaaatcatttgaggatatcagaagcaagacacaagtagaagagagg 155  Q
    ||||||| |||| ||||||||||||   || ||| || ||||||  ||||||||||  |||||||||||   || ||| || |  |||||||||||| ||    
T  39488348 catgtcatctgagaaatcattttccttgctgaaaaaagaacttgcattggtagaaacctcatttgaggaatgcaaaaggaaaaggcaagtagaagagggg 39488249  T
Q  156 agattgcagtccataaagagagatattgaggagtgctgcgaagatcttgaaaataagaaaaaggaaattagggatgttggaagaatta 243  Q
    ||| ||||||| |||||||||||| ||||||||||||   |||| ||||||||||||||||||||||||||   ||||||||||||||    
T  39488248 agactgcagtctataaagagagatgttgaggagtgctctaaagagcttgaaaataagaaaaaggaaattagttgtgttggaagaatta 39488161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 145 - 226
Target Start/End: Original strand, 39601994 - 39602075
Alignment:
Q  145 tagaagagaggagattgcagtccataaagagagatattgaggagtgctgcgaagatcttgaaaataagaaaaaggaaattag 226  Q
    |||||||||  ||||||||||||||||||| ||||||| |||||||| || |||| ||||||||||||||||||||||||||    
T  39601994 tagaagagaatagattgcagtccataaagatagatattcaggagtgccgcaaagagcttgaaaataagaaaaaggaaattag 39602075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 141 - 243
Target Start/End: Original strand, 39151897 - 39151999
Alignment:
Q  141 caagtagaagagaggagattgcagtccataaagagagatattgaggagtgctgcgaagatcttgaaaataagaaaaaggaaattagggatgttggaagaa 240  Q
    ||||||||||||| |||| ||||||| ||||||||| ||||||||||  ||| | |||| |||||||||||||||||||||||||    |||||||||||    
T  39151897 caagtagaagagaagagactgcagtcaataaagagaaatattgaggaacgctccaaagagcttgaaaataagaaaaaggaaattacctgtgttggaagaa 39151996  T
Q  241 tta 243  Q
    |||    
T  39151997 tta 39151999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 156 - 242
Target Start/End: Original strand, 39123536 - 39123622
Alignment:
Q  156 agattgcagtccataaagagagatattgaggagtgctgcgaagatcttgaaaataagaaaaaggaaattagggatgttggaagaatt 242  Q
    |||||||| |||||| ||||||||||||||| ||||| | ||||||||||||||| |||||||||||| ||  |||||| |||||||    
T  39123536 agattgcactccatacagagagatattgaggggtgctccaaagatcttgaaaatatgaaaaaggaaatgagttatgttgaaagaatt 39123622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 140 - 210
Target Start/End: Original strand, 44623617 - 44623687
Alignment:
Q  140 acaagtagaagagaggagattgcagtccataaagagagatattgaggagtgctgcgaagatcttgaaaata 210  Q
    |||||||||||||||| |||||| ||| |||||||||||||||||| ||||||||||||| || |||||||    
T  44623617 acaagtagaagagaggcgattgcggtctataaagagagatattgagaagtgctgcgaagagctagaaaata 44623687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 142 - 214
Target Start/End: Original strand, 39214925 - 39214997
Alignment:
Q  142 aagtagaagagaggagattgcagtccataaagagagatattgaggagtgctgcgaagatcttgaaaataagaa 214  Q
    ||||||| |||| |||||||||||||||||||||| || |||||||||||||  |||| ||||||||||||||    
T  39214925 aagtagaggagaagagattgcagtccataaagagatatgttgaggagtgctgtaaagagcttgaaaataagaa 39214997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 142 - 218
Target Start/End: Original strand, 39450499 - 39450575
Alignment:
Q  142 aagtagaagagaggagattgcagtccataaagagagatattgaggagtgctgcgaagatcttgaaaataagaaaaag 218  Q
    |||||||||| | ||||||||||||||| |||| |||||||||||| |||||| |||| ||| ||||||||||||||    
T  39450499 aagtagaagaaaagagattgcagtccatcaagacagatattgaggactgctgcaaagagcttcaaaataagaaaaag 39450575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 102 - 216
Target Start/End: Complemental strand, 27155095 - 27154981
Alignment:
Q  102 ttggtagaaaaatcatttgaggatatcagaagcaagacacaagtagaagagaggagattgcagtccataaagagagatattgaggagtgctgcgaagatc 201  Q
    ||||||||||||| |||||| ||  ||| ||  || | ||||| |||||||   ||||||||||||||||||||||||||||||||||||| | |||| |    
T  27155095 ttggtagaaaaattatttgaagaattcaaaaagaaaagacaagaagaagaggaaagattgcagtccataaagagagatattgaggagtgctccaaagagc 27154996  T
Q  202 ttgaaaataagaaaa 216  Q
    ||| ||||| |||||    
T  27154995 ttggaaatatgaaaa 27154981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 145 - 214
Target Start/End: Complemental strand, 39382282 - 39382213
Alignment:
Q  145 tagaagagaggagattgcagtccataaagagagatattgaggagtgctgcgaagatcttgaaaataagaa 214  Q
    ||||||||| |||||| ||||||||||||||||||| ||| ||||||||| |||| ||| ||||||||||    
T  39382282 tagaagagaagagattacagtccataaagagagatactgaagagtgctgcaaagagcttcaaaataagaa 39382213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 146 - 223
Target Start/End: Complemental strand, 39495611 - 39495534
Alignment:
Q  146 agaagagaggagattgcagtccataaagagagatattgaggagtgctgcgaagatcttgaaaataagaaaaaggaaat 223  Q
    |||||||  |||||||||||||||||||||||||||||||||| ||| | |||| |||| |||||  |||||||||||    
T  39495611 agaagaggagagattgcagtccataaagagagatattgaggagcgctccaaagagcttggaaatataaaaaaggaaat 39495534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 142 - 214
Target Start/End: Complemental strand, 39199554 - 39199482
Alignment:
Q  142 aagtagaagagaggagattgcagtccataaagagagatattgaggagtgctgcgaagatcttgaaaataagaa 214  Q
    |||| |||||||  ||||||||||||||||||||||||| ||| ||||||||| |||| ||| ||||||||||    
T  39199554 aagttgaagagaaaagattgcagtccataaagagagatactgaagagtgctgcaaagagcttcaaaataagaa 39199482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 142 - 214
Target Start/End: Complemental strand, 39399085 - 39399013
Alignment:
Q  142 aagtagaagagaggagattgcagtccataaagagagatattgaggagtgctgcgaagatcttgaaaataagaa 214  Q
    |||||||||||| |||||||||||||||||||||||||||||| || |||||  |||| |||| ||| |||||    
T  39399085 aagtagaagagaagagattgcagtccataaagagagatattgaagactgctggaaagaacttggaaaaaagaa 39399013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 213
Target Start/End: Original strand, 39220162 - 39220233
Alignment:
Q  142 aagtagaagagaggagattgcagtccataaagagagatattgaggagtgctgcgaagatcttgaaaataaga 213  Q
    |||| |||||||| ||||| ||||||||||||||||| | ||| ||||||||| |||||||| ||| |||||    
T  39220162 aagttgaagagagaagattacagtccataaagagagaaactgaagagtgctgcaaagatcttcaaattaaga 39220233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 39391725 - 39391666
Alignment:
Q  155 gagattgcagtccataaagagagatattgaggagtgctgcgaagatcttgaaaataagaa 214  Q
    |||||||| ||||||||||| ||||||||| ||||||||| |||| |||||| |||||||    
T  39391725 gagattgctgtccataaagaaagatattgaagagtgctgcaaagagcttgaagataagaa 39391666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 190
Target Start/End: Complemental strand, 39479224 - 39479182
Alignment:
Q  148 aagagaggagattgcagtccataaagagagatattgaggagtg 190  Q
    |||||| |||||||||||||||||||||||||||||| |||||    
T  39479224 aagagaagagattgcagtccataaagagagatattgaagagtg 39479182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 44614473 - 44614543
Alignment:
Q  142 aagtagaagagaggagattgcagtccataaagagagatattgaggagtgctgcgaagatcttgaaaataag 212  Q
    ||||||||||||||  ||||| ||| |||||||||||||||||| | |||||| |||| || |||||||||    
T  44614473 aagtagaagagaggcaattgcggtctataaagagagatattgagaaatgctgcaaagagctagaaaataag 44614543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 214
Target Start/End: Original strand, 39161102 - 39161162
Alignment:
Q  154 ggagattgcagtccataaagagagatattgaggagtgctgcgaagatcttgaaaataagaa 214  Q
    ||||||||||||||||  ||| ||||||||| || |||||| |||| |||||| |||||||    
T  39161102 ggagattgcagtccatccagaaagatattgaagaatgctgcaaagagcttgaagataagaa 39161162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 214
Target Start/End: Complemental strand, 39208092 - 39208032
Alignment:
Q  154 ggagattgcagtccataaagagagatattgaggagtgctgcgaagatcttgaaaataagaa 214  Q
    ||||||||||||||||  ||| ||||||||| || |||||| |||| |||||| |||||||    
T  39208092 ggagattgcagtccatccagaaagatattgaagaatgctgcaaagagcttgaagataagaa 39208032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 168; Significance: 4e-90; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 56 - 243
Target Start/End: Original strand, 19806556 - 19806743
Alignment:
Q  56 catgtcaactgataaatcattttccacactcaaagaaaaacttgtgttggtagaaaaatcatttgaggatatcagaagcaagacacaagtagaagagagg 155  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19806556 catgtcaactgataaatcattttccacactcaaagaagaacttgtgttggtagaaaaatcatttgaggatatcagaagcaagacacaagtagaagagagg 19806655  T
Q  156 agattgcagtccataaagagagatattgaggagtgctgcgaagatcttgaaaataagaaaaaggaaattagggatgttggaagaatta 243  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||| |||||||    
T  19806656 agattgcagtccataaagagagatattgaggattgctgcgaagatcttgaaaataagaaaaaggaaattagttatgttgggagaatta 19806743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 212
Target Start/End: Complemental strand, 44951455 - 44951384
Alignment:
Q  141 caagtagaagagaggagattgcagtccataaagagagatattgaggagtgctgcgaagatcttgaaaataag 212  Q
    |||||||||||||||  ||||| | | ||||||||||||||| || ||||||||||||| ||||||||||||    
T  44951455 caagtagaagagaggcaattgcggccgataaagagagatattaagaagtgctgcgaagagcttgaaaataag 44951384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 214
Target Start/End: Original strand, 33559636 - 33559695
Alignment:
Q  155 gagattgcagtccataaagagagatattgaggagtgctgcgaagatcttgaaaataagaa 214  Q
    ||||||||||||  |||||| ||||||||| ||||||||| |||| |||||| |||||||    
T  33559636 gagattgcagtctgtaaagaaagatattgaagagtgctgcaaagagcttgaagataagaa 33559695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 184
Target Start/End: Original strand, 16112428 - 16112466
Alignment:
Q  146 agaagagaggagattgcagtccataaagagagatattga 184  Q
    |||||||| || |||||||||||||||||||||||||||    
T  16112428 agaagagaagaaattgcagtccataaagagagatattga 16112466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University