View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14642_low_41 (Length: 259)
Name: NF14642_low_41
Description: NF14642
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14642_low_41 |
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Alignment Details
Target: chr8 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 19 - 248
Target Start/End: Complemental strand, 30300341 - 30300112
Alignment:
| Q |
19 |
ctaagctcaccaggagtctgggacagtggctcttttttctttcctactacgttcttcacatttgttaactatgttctttattttatagtatgttgcactg |
118 |
Q |
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| T |
30300341 |
ctaagctcactgggagtctgggacagtggctcttttttctttcctaccacgttcttcacatttgttaactatgttctttattttatagtatgttgcacgg |
30300242 |
T |
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| Q |
119 |
acactttgtattaaaggtgtatcaatgtttgacatgtgccaatgtctgacacatgtgttacatttaatcacatacatttttatattaataccagtgtttg |
218 |
Q |
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| T |
30300241 |
aaactttgtattaaaggtgtgtcaatgtttgacatgtgccaatgtctgacacatgtgttacatttaatcacatacatttttatattaataccagtgtttg |
30300142 |
T |
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| Q |
219 |
tttacttgtcgatgccgtgttggtgttcat |
248 |
Q |
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| T |
30300141 |
tttacttgtcgatgccgtgttggtgttcat |
30300112 |
T |
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