View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14644_high_16 (Length: 212)

Name: NF14644_high_16
Description: NF14644
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14644_high_16
NF14644_high_16
[»] chr3 (11 HSPs)
chr3 (10-106)||(19929943-19930041)
chr3 (11-106)||(42253469-42253567)
chr3 (108-181)||(19930068-19930140)
chr3 (10-97)||(19935144-19935233)
chr3 (108-181)||(2353208-2353281)
chr3 (108-180)||(26445126-26445198)
chr3 (28-106)||(42256744-42256821)
chr3 (108-181)||(9372244-9372317)
chr3 (108-157)||(42253594-42253643)
chr3 (109-171)||(11634204-11634266)
chr3 (129-174)||(42256873-42256918)
[»] chr4 (10 HSPs)
chr4 (108-181)||(31767480-31767553)
chr4 (109-181)||(895455-895526)
chr4 (109-171)||(6667753-6667814)
chr4 (108-181)||(43287860-43287933)
chr4 (111-171)||(44643475-44643534)
chr4 (55-106)||(13250479-13250530)
chr4 (108-174)||(13250557-13250624)
chr4 (117-171)||(4747210-4747264)
chr4 (108-181)||(43472116-43472188)
chr4 (109-137)||(13010567-13010595)
[»] chr7 (12 HSPs)
chr7 (108-181)||(13815750-13815823)
chr7 (108-181)||(15569578-15569651)
chr7 (108-181)||(32352461-32352534)
chr7 (108-171)||(2609634-2609697)
chr7 (109-148)||(22301185-22301224)
chr7 (109-171)||(39426485-39426546)
chr7 (109-149)||(11674044-11674084)
chr7 (108-171)||(15169957-15170020)
chr7 (109-171)||(3850573-3850635)
chr7 (109-171)||(31206660-31206721)
chr7 (109-171)||(31210109-31210170)
chr7 (61-106)||(2609562-2609607)
[»] chr5 (5 HSPs)
chr5 (108-181)||(13291965-13292038)
chr5 (109-171)||(26703051-26703113)
chr5 (109-171)||(26972784-26972846)
chr5 (109-171)||(18594837-18594898)
chr5 (109-171)||(39292121-39292182)
[»] chr1 (12 HSPs)
chr1 (108-181)||(43254127-43254200)
chr1 (108-169)||(49387638-49387699)
chr1 (109-181)||(9111575-9111646)
chr1 (109-171)||(1953710-1953771)
chr1 (109-171)||(24981196-24981257)
chr1 (109-171)||(38825511-38825573)
chr1 (109-149)||(12141686-12141726)
chr1 (109-171)||(4242603-4242664)
chr1 (108-170)||(49390927-49390989)
chr1 (108-171)||(21501282-21501345)
chr1 (109-171)||(38828721-38828783)
chr1 (108-149)||(39197257-39197298)
[»] scaffold0028 (2 HSPs)
scaffold0028 (109-171)||(110143-110204)
scaffold0028 (109-171)||(127722-127783)
[»] chr6 (7 HSPs)
chr6 (108-181)||(2936180-2936253)
chr6 (108-160)||(24044965-24045017)
chr6 (108-163)||(24041662-24041717)
chr6 (109-171)||(19697879-19697940)
chr6 (108-181)||(14579631-14579704)
chr6 (108-181)||(3835692-3835765)
chr6 (109-149)||(6591883-6591923)
[»] chr2 (6 HSPs)
chr2 (108-169)||(27083122-27083183)
chr2 (109-171)||(2590523-2590584)
chr2 (109-171)||(14433633-14433695)
chr2 (129-181)||(27107315-27107367)
chr2 (109-171)||(18739145-18739206)
chr2 (109-171)||(21189424-21189485)
[»] scaffold0293 (1 HSPs)
scaffold0293 (108-171)||(4957-5020)
[»] chr8 (6 HSPs)
chr8 (109-171)||(1788933-1788994)
chr8 (109-148)||(21347156-21347195)
chr8 (109-171)||(39655733-39655794)
chr8 (109-171)||(17028377-17028438)
chr8 (109-171)||(17558813-17558874)
chr8 (109-139)||(21185355-21185385)
[»] scaffold0076 (1 HSPs)
scaffold0076 (109-171)||(6794-6855)
[»] scaffold0014 (1 HSPs)
scaffold0014 (109-159)||(82656-82705)
[»] scaffold0216 (1 HSPs)
scaffold0216 (112-181)||(12125-12194)
[»] scaffold0933 (1 HSPs)
scaffold0933 (116-174)||(1086-1143)


Alignment Details
Target: chr3 (Bit Score: 72; Significance: 6e-33; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 19929943 - 19930041
Alignment:
Q  10 gaaatgaatcaacttatct--tcttaaaattgtagtgatttgacgtgaacaaacaagaaatcatgaccggcaaaatagtaaaccgttatataacatgag 106  Q
    ||||| ||||||||| |||  ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  19929943 gaaatcaatcaacttctctgttcttaaaattgcagtgatttgacgtgaacaaacaagaaatcatgacctgcaaaatagtaaaccgttatataacatgag 19930041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 11 - 106
Target Start/End: Original strand, 42253469 - 42253567
Alignment:
Q  11 aaatgaatcaacttatct---tcttaaaattgtagtgatttgacgtgaacaaacaagaaatcatgaccggcaaaatagtaaaccgttatataacatgag 106  Q
    |||| |||||||||||||   |||||||| || | ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  42253469 aaatcaatcaacttatctagttcttaaaactgcattgatttgacgtgaacaaacaagaaatcatgacctgcaaaatagtaaaccgttatataacatgag 42253567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 108 - 181
Target Start/End: Original strand, 19930068 - 19930140
Alignment:
Q  108 atttatccgcctcataagcgcatatcctcccaagatacaacatgttcttccctgatatgaatcacataagaggt 181  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||    
T  19930068 atttatccgcctcataagcgcatatcctccca-gatacaacatgttcttccctgagatgaatcacatcagaggt 19930140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 19935144 - 19935233
Alignment:
Q  10 gaaatgaatcaacttatct--tcttaaaattgtagtgatttgacgtgaacaaacaagaaatcatgaccggcaaaatagtaaaccgttata 97  Q
    ||||| |||||| ||||||  ||||||||||| |||||||| |||||||||||||||||||||||||  |||||||||||||||||||||    
T  19935144 gaaatcaatcaaattatctattcttaaaattgcagtgatttaacgtgaacaaacaagaaatcatgacgtgcaaaatagtaaaccgttata 19935233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 108 - 181
Target Start/End: Complemental strand, 2353281 - 2353208
Alignment:
Q  108 atttatccgcctcataagcgcatatcctcccaagatacaacatgttcttccctgatatgaatcacataagaggt 181  Q
    |||||||||||||||||| || |||||||||| ||||||||| ||||||| ||||||||||||| |||||||||    
T  2353281 atttatccgcctcataagtgcttatcctcccaggatacaacaggttcttctctgatatgaatcatataagaggt 2353208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 108 - 180
Target Start/End: Original strand, 26445126 - 26445198
Alignment:
Q  108 atttatccgcctcataagcgcatatcctcccaagatacaacatgttcttccctgatatgaatcacataagagg 180  Q
    ||||||||||||||||| || |||||||  |||||||||||||||||||||||||||||||||| || |||||    
T  26445126 atttatccgcctcataatcgtatatcctgtcaagatacaacatgttcttccctgatatgaatcatatcagagg 26445198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 28 - 106
Target Start/End: Original strand, 42256744 - 42256821
Alignment:
Q  28 ttcttaaaattgtagtgatttgacgtgaacaaacaagaaatcatgaccggcaaaatagtaaaccgttatataacatgag 106  Q
    ||||||| |||| ||||||||||||||||||| ||||||||||||| | ||||| ||||||| ||||||||||||||||    
T  42256744 ttcttaagattgcagtgatttgacgtgaacaagcaagaaatcatga-ctgcaaactagtaaatcgttatataacatgag 42256821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 181
Target Start/End: Original strand, 9372244 - 9372317
Alignment:
Q  108 atttatccgcctcataagcgcatatcctcccaagatacaacatgttcttccctgatatgaatcacataagaggt 181  Q
    |||||| ||||||||||||||||||| ||||| ||||||||| |||| |||||||||||||||| || ||||||    
T  9372244 atttattcgcctcataagcgcatatcgtcccaggatacaacaggttcatccctgatatgaatcatatgagaggt 9372317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 157
Target Start/End: Original strand, 42253594 - 42253643
Alignment:
Q  108 atttatccgcctcataagcgcatatcctcccaagatacaacatgttcttc 157  Q
    ||||| |||||||||||||||||||||||| | |||||||||||||||||    
T  42253594 atttacccgcctcataagcgcatatcctccaaggatacaacatgttcttc 42253643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 109 - 171
Target Start/End: Original strand, 11634204 - 11634266
Alignment:
Q  109 tttatccgcctcataagcgcatatcctcccaagatacaacatgttcttccctgatatgaatca 171  Q
    ||||||| |||| ||| |||||||||||||| |||||||||||| |||||| | |||||||||    
T  11634204 tttatccacctcgtaaacgcatatcctcccaggatacaacatgtccttccccgttatgaatca 11634266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 174
Target Start/End: Original strand, 42256873 - 42256918
Alignment:
Q  129 atatcctcccaagatacaacatgttcttccctgatatgaatcacat 174  Q
    |||| |||||| |||||||||| |||||||||||||||||||||||    
T  42256873 atatactcccaggatacaacatattcttccctgatatgaatcacat 42256918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 1e-24; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 108 - 181
Target Start/End: Original strand, 31767480 - 31767553
Alignment:
Q  108 atttatccgcctcataagcgcatatcctcccaagatacaacatgttcttccctgatatgaatcacataagaggt 181  Q
    ||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||||||||||| ||||||    
T  31767480 atttatccgcctcataagcacatatcctcctaggatacaacatgttcttccctgatatgaatcacatcagaggt 31767553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 109 - 181
Target Start/End: Complemental strand, 895526 - 895455
Alignment:
Q  109 tttatccgcctcataagcgcatatcctcccaagatacaacatgttcttccctgatatgaatcacataagaggt 181  Q
    ||||||||||||||||||||||||||||||| ||||||| | |||||||||| |||||||||| || ||||||    
T  895526 tttatccgcctcataagcgcatatcctcccaggatacaa-aagttcttccctaatatgaatcatatcagaggt 895455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 109 - 171
Target Start/End: Original strand, 6667753 - 6667814
Alignment:
Q  109 tttatccgcctcataagcgcatatcctcccaagatacaacatgttcttccctgatatgaatca 171  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||| | |||||||||    
T  6667753 tttatccgcctcataagcgcatatcctcccaggatacaaca-gttcttccccgttatgaatca 6667814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 108 - 181
Target Start/End: Complemental strand, 43287933 - 43287860
Alignment:
Q  108 atttatccgcctcataagcgcatatcctcccaagatacaacatgttcttccctgatatgaatcacataagaggt 181  Q
    |||||| ||||||||||||||||||| | ||| |||||||||| |||||| | |||||||||||||| ||||||    
T  43287933 atttattcgcctcataagcgcatatctttccaggatacaacatattcttctcagatatgaatcacatcagaggt 43287860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 171
Target Start/End: Complemental strand, 44643534 - 44643475
Alignment:
Q  111 tatccgcctcataagcgcatatcctcccaagatacaacatgttcttccctgatatgaatca 171  Q
    ||||||||||||||||||||||||||| | ||||||||| ||||||||| |||||||||||    
T  44643534 tatccgcctcataagcgcatatcctcctaggatacaaca-gttcttccccgatatgaatca 44643475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 55 - 106
Target Start/End: Original strand, 13250479 - 13250530
Alignment:
Q  55 aacaaacaagaaatcatgaccggcaaaatagtaaaccgttatataacatgag 106  Q
    ||||||||| ||||||||||| |||||||||||| |||||||||||||||||    
T  13250479 aacaaacaaaaaatcatgacctgcaaaatagtaagccgttatataacatgag 13250530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 108 - 174
Target Start/End: Original strand, 13250557 - 13250624
Alignment:
Q  108 atttatccgcctcataagcgcatatcctcccaag-atacaacatgttcttccctgatatgaatcacat 174  Q
    |||||||| ||||||||||||||||||| |  || |||||| ||||||||||||||||||||||||||    
T  13250557 atttatccacctcataagcgcatatccttcttaggatacaatatgttcttccctgatatgaatcacat 13250624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 117 - 171
Target Start/End: Complemental strand, 4747264 - 4747210
Alignment:
Q  117 cctcataagcgcatatcctcccaagatacaacatgttcttccctgatatgaatca 171  Q
    ||||||||||| ||||||||||||||||||||| ||||||| ||  |||||||||    
T  4747264 cctcataagcgtatatcctcccaagatacaacaggttcttcgcttgtatgaatca 4747210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 108 - 181
Target Start/End: Complemental strand, 43472188 - 43472116
Alignment:
Q  108 atttatccgcctcataagcgcatatcctcccaagatacaacatgttcttccctgatatgaatcacataagaggt 181  Q
    |||||| |||||||||||| |  ||||||| | ||||||||||||||||||| ||| | |||||||| ||||||    
T  43472188 atttattcgcctcataagcacgcatcctcctaggatacaacatgttcttcccagatct-aatcacatcagaggt 43472116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 137
Target Start/End: Original strand, 13010567 - 13010595
Alignment:
Q  109 tttatccgcctcataagcgcatatcctcc 137  Q
    |||||||||||||||||||||||||||||    
T  13010567 tttatccgcctcataagcgcatatcctcc 13010595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 8e-20; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 108 - 181
Target Start/End: Complemental strand, 13815823 - 13815750
Alignment:
Q  108 atttatccgcctcataagcgcatatcctcccaagatacaacatgttcttccctgatatgaatcacataagaggt 181  Q
    |||||| ||||||||||||||||||| ||||| |||||||||||||||||||| || |||||||||| ||||||    
T  13815823 atttattcgcctcataagcgcatatcttcccaggatacaacatgttcttccctaatgtgaatcacatcagaggt 13815750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 108 - 181
Target Start/End: Complemental strand, 15569651 - 15569578
Alignment:
Q  108 atttatccgcctcataagcgcatatcctcccaagatacaacatgttcttccctgatatgaatcacataagaggt 181  Q
    ||||||||||||||||||| |||||||||||| ||||||||| ||||||| ||||||||||||| || ||||||    
T  15569651 atttatccgcctcataagcacatatcctcccaggatacaacaggttcttctctgatatgaatcatatcagaggt 15569578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 181
Target Start/End: Original strand, 32352461 - 32352534
Alignment:
Q  108 atttatccgcctcataagcgcatatcctcccaagatacaacatgttcttccctgatatgaatcacataagaggt 181  Q
    |||||| ||||||||||||||||||||||||| || ||||||| |||||| | |||||||||||||| ||||||    
T  32352461 atttattcgcctcataagcgcatatcctcccaggacacaacatattcttctcagatatgaatcacatcagaggt 32352534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 108 - 171
Target Start/End: Original strand, 2609634 - 2609697
Alignment:
Q  108 atttatccgcctcataagcgcatatcctcccaagatacaacatgttcttccctgatatgaatca 171  Q
    ||||||| | ||||||||||||||||||| || ||||||||||||||||| |||||||||||||    
T  2609634 atttatctgtctcataagcgcatatcctcgcaggatacaacatgttcttctctgatatgaatca 2609697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 109 - 148
Target Start/End: Original strand, 22301185 - 22301224
Alignment:
Q  109 tttatccgcctcataagcgcatatcctcccaagatacaac 148  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  22301185 tttatccgcctcataagcgcatatcctcccaagatacaac 22301224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 109 - 171
Target Start/End: Original strand, 39426485 - 39426546
Alignment:
Q  109 tttatccgcctcataagcgcatatcctcccaagatacaacatgttcttccctgatatgaatca 171  Q
    |||||||| |||||||||| |||||||||||||||| |||| ||||||||||| |||||||||    
T  39426485 tttatccgtctcataagcgaatatcctcccaagataaaaca-gttcttccctgttatgaatca 39426546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 109 - 149
Target Start/End: Complemental strand, 11674084 - 11674044
Alignment:
Q  109 tttatccgcctcataagcgcatatcctcccaagatacaaca 149  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  11674084 tttatccgcctcataagcgcatatcctcccaggatacaaca 11674044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 171
Target Start/End: Complemental strand, 15170020 - 15169957
Alignment:
Q  108 atttatccgcctcataagcgcatatcctcccaagatacaacatgttcttccctgatatgaatca 171  Q
    ||||||| ||||||||| ||||||||||| || ||||||||| ||||||| || | ||||||||    
T  15170020 atttatcagcctcataaacgcatatcctcacaggatacaacaggttcttctctaacatgaatca 15169957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 171
Target Start/End: Original strand, 3850573 - 3850635
Alignment:
Q  109 tttatccgcctcataagcgcatatcctcccaagatacaacatgttcttccctgatatgaatca 171  Q
    ||||| ||||||||||||||||||||||| | ||||||||  ||||||||  | |||||||||    
T  3850573 tttatacgcctcataagcgcatatcctcctatgatacaacgagttcttcctcggtatgaatca 3850635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 171
Target Start/End: Original strand, 31206660 - 31206721
Alignment:
Q  109 tttatccgcctcataagcgcatatcctcccaagatacaacatgttcttccctgatatgaatca 171  Q
    ||||||| |||||||||||||||||||  || ||||||||| ||||||||| | |||||||||    
T  31206660 tttatccacctcataagcgcatatcctggcaggatacaaca-gttcttccccgttatgaatca 31206721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 171
Target Start/End: Original strand, 31210109 - 31210170
Alignment:
Q  109 tttatccgcctcataagcgcatatcctcccaagatacaacatgttcttccctgatatgaatca 171  Q
    ||||||||||||||||| ||||||||||||  | ||||||| ||||||||| | |||||||||    
T  31210109 tttatccgcctcataagtgcatatcctcccggggtacaaca-gttcttccccgttatgaatca 31210170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 61 - 106
Target Start/End: Original strand, 2609562 - 2609607
Alignment:
Q  61 caagaaatcatgaccggcaaaatagtaaaccgttatataacatgag 106  Q
    ||||||||||||||| |||||||||||| || ||||||||| ||||    
T  2609562 caagaaatcatgacctgcaaaatagtaagcctttatataacctgag 2609607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 8e-20; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 108 - 181
Target Start/End: Complemental strand, 13292038 - 13291965
Alignment:
Q  108 atttatccgcctcataagcgcatatcctcccaagatacaacatgttcttccctgatatgaatcacataagaggt 181  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||| ||| ||||||||||||| || ||||||    
T  13292038 atttatccgcctcataagcgcatatcctcccaggatacaacaggttattctctgatatgaatcatatcagaggt 13291965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 109 - 171
Target Start/End: Original strand, 26703051 - 26703113
Alignment:
Q  109 tttatccgcctcataagcgcatatcctcccaagatacaacatgttcttccctgatatgaatca 171  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||| ||| |||||||||    
T  26703051 tttatccgcctcataaacgcatatcctcccaagatacaacaagttcttctctggtatgaatca 26703113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 109 - 171
Target Start/End: Original strand, 26972784 - 26972846
Alignment:
Q  109 tttatccgcctcataagcgcatatcctcccaagatacaacatgttcttccctgatatgaatca 171  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||| ||| |||||||||    
T  26972784 tttatccgcctcataaacgcatatcctcccaagatacaacaagttcttctctggtatgaatca 26972846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 109 - 171
Target Start/End: Complemental strand, 18594898 - 18594837
Alignment:
Q  109 tttatccgcctcataagcgcatatcctcccaagatacaacatgttcttccctgatatgaatca 171  Q
    |||||||||||||||||||||||| ||| || ||||||||| ||||||||| | |||||||||    
T  18594898 tttatccgcctcataagcgcatattctcacaggatacaaca-gttcttccccgttatgaatca 18594837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 171
Target Start/End: Complemental strand, 39292182 - 39292121
Alignment:
Q  109 tttatccgcctcataagcgcatatcctcccaagatacaacatgttcttccctgatatgaatca 171  Q
    ||||||||||||||||||||||||||| |||  |||||||| ||||||| | | |||||||||    
T  39292182 tttatccgcctcataagcgcatatccttccagaatacaaca-gttcttctccgttatgaatca 39292121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 8e-20; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 108 - 181
Target Start/End: Complemental strand, 43254200 - 43254127
Alignment:
Q  108 atttatccgcctcataagcgcatatcctcccaagatacaacatgttcttccctgatatgaatcacataagaggt 181  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||||||  |||||||||| || ||||||    
T  43254200 atttattcgcctcataagcgcatatcctcccaggatacaacatgttcttcccatatatgaatcatatcagaggt 43254127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 169
Target Start/End: Original strand, 49387638 - 49387699
Alignment:
Q  108 atttatccgcctcataagcgcatatcctcccaagatacaacatgttcttccctgatatgaat 169  Q
    |||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  49387638 atttattcgccttataagcgcatatcctcccaggatacaacatgttcttccctgatgtgaat 49387699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 181
Target Start/End: Original strand, 9111575 - 9111646
Alignment:
Q  109 tttatccgcctcataagcgcatatcctcccaagatacaacatgttcttccctgatatgaatcacataagaggt 181  Q
    ||||||||||||||||||||||||| ||||| ||||||||| ||||||| ||||||| ||||| || ||||||    
T  9111575 tttatccgcctcataagcgcatatcttcccaggatacaaca-gttcttcactgatataaatcatatcagaggt 9111646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 109 - 171
Target Start/End: Complemental strand, 1953771 - 1953710
Alignment:
Q  109 tttatccgcctcataagcgcatatcctcccaagatacaacatgttcttccctgatatgaatca 171  Q
    |||||| |||||||||||| ||||||||||| ||||||||| ||||||||||| |||||||||    
T  1953771 tttatctgcctcataagcgaatatcctcccaggatacaaca-gttcttccctgttatgaatca 1953710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 109 - 171
Target Start/End: Original strand, 24981196 - 24981257
Alignment:
Q  109 tttatccgcctcataagcgcatatcctcccaagatacaacatgttcttccctgatatgaatca 171  Q
    |||||||||||||||||| |||||||||||| ||||||||| ||||||||| | |||||||||    
T  24981196 tttatccgcctcataagcacatatcctcccaggatacaaca-gttcttccccgttatgaatca 24981257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 109 - 171
Target Start/End: Original strand, 38825511 - 38825573
Alignment:
Q  109 tttatccgcctcataagcgcatatcctcccaagatacaacatgttcttccctgatatgaatca 171  Q
    ||||||| |||||||| |||||||||||||| ||||||||| ||||||| ||| |||||||||    
T  38825511 tttatcctcctcataaacgcatatcctcccaggatacaacaagttcttctctgctatgaatca 38825573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 109 - 149
Target Start/End: Original strand, 12141686 - 12141726
Alignment:
Q  109 tttatccgcctcataagcgcatatcctcccaagatacaaca 149  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  12141686 tttatccgcctcataagcgcatatcctcccaggatacaaca 12141726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 109 - 171
Target Start/End: Original strand, 4242603 - 4242664
Alignment:
Q  109 tttatccgcctcataagcgcatatcctcccaagatacaacatgttcttccctgatatgaatca 171  Q
    |||||||| ||||| |||||||||||||||| |||||||| |||||||||| | |||||||||    
T  4242603 tttatccgactcatgagcgcatatcctcccaggatacaac-tgttcttccccgttatgaatca 4242664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 108 - 170
Target Start/End: Original strand, 49390927 - 49390989
Alignment:
Q  108 atttatccgcctcataagcgcatatcctcccaagatacaacatgttcttccctgatatgaatc 170  Q
    |||||| ||| ||||||||||||||||| ||| ||||||||||||||||| || || ||||||    
T  49390927 atttattcgcttcataagcgcatatccttccaggatacaacatgttcttctctaatgtgaatc 49390989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 171
Target Start/End: Original strand, 21501282 - 21501345
Alignment:
Q  108 atttatccgcctcataagcgcatatcctcccaagatacaacatgttcttccctgatatgaatca 171  Q
    ||||||||| |||||||| | ||||||||| | ||||||||||||||||| || |||| |||||    
T  21501282 atttatccgtctcataagtgtatatcctcctaggatacaacatgttcttctctaatataaatca 21501345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 171
Target Start/End: Original strand, 38828721 - 38828783
Alignment:
Q  109 tttatccgcctcataagcgcatatcctcccaagatacaacatgttcttccctgatatgaatca 171  Q
    ||||||||||| |||||| |||||| ||||| |||| |||| ||||||||||  |||||||||    
T  38828721 tttatccgccttataagctcatatcttcccaggataaaacaagttcttccctactatgaatca 38828783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 108 - 149
Target Start/End: Complemental strand, 39197298 - 39197257
Alignment:
Q  108 atttatccgcctcataagcgcatatcctcccaagatacaaca 149  Q
    ||||||| |||||||||||||||||||| ||| |||||||||    
T  39197298 atttatctgcctcataagcgcatatcctaccaggatacaaca 39197257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 47; Significance: 5e-18; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 109 - 171
Target Start/End: Complemental strand, 110204 - 110143
Alignment:
Q  109 tttatccgcctcataagcgcatatcctcccaagatacaacatgttcttccctgatatgaatca 171  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||||    
T  110204 tttatccgcctcataaacgcatatcctcccaagatacaaca-gttcttcgctgatatgaatca 110143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 109 - 171
Target Start/End: Complemental strand, 127783 - 127722
Alignment:
Q  109 tttatccgcctcataagcgcatatcctcccaagatacaacatgttcttccctgatatgaatca 171  Q
    ||||||||||||| || |||||||||||||| ||||||||| |||||||||||||||||||||    
T  127783 tttatccgcctcagaaacgcatatcctcccatgatacaaca-gttcttccctgatatgaatca 127722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 2e-17; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 181
Target Start/End: Original strand, 2936180 - 2936253
Alignment:
Q  108 atttatccgcctcataagcgcatatcctcccaagatacaacatgttcttccctgatatgaatcacataagaggt 181  Q
    |||||||||||||||||||||||||| |  |||||||| ||||||||||| ||||||| |||||||| ||||||    
T  2936180 atttatccgcctcataagcgcatatcttttcaagataccacatgttcttctctgatataaatcacatcagaggt 2936253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 24044965 - 24045017
Alignment:
Q  108 atttatccgcctcataagcgcatatcctcccaagatacaacatgttcttccct 160  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  24044965 atttattcgcctcataagcgcatatcctcccaggatacaacatgttcttccct 24045017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 24041662 - 24041717
Alignment:
Q  108 atttatccgcctcataagcgcatatcctcccaagatacaacatgttcttccctgat 163  Q
    |||||| ||||||||||||||||||||||| | |||||||||||||||||||||||    
T  24041662 atttattcgcctcataagcgcatatcctcctaggatacaacatgttcttccctgat 24041717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 109 - 171
Target Start/End: Original strand, 19697879 - 19697940
Alignment:
Q  109 tttatccgcctcataagcgcatatcctcccaagatacaacatgttcttccctgatatgaatca 171  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||| | |||||||||    
T  19697879 tttatccgcctcataagcgcatatcctcccaggatacaaca-gttcttccccgttatgaatca 19697940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 108 - 181
Target Start/End: Complemental strand, 14579704 - 14579631
Alignment:
Q  108 atttatccgcctcataagcgcatatcctcccaagatacaacatgttcttccctgatatgaatcacataagaggt 181  Q
    |||||||||||||||||||| |||||||| || ||||||||| ||||||| |||| ||||||||  ||||||||    
T  14579704 atttatccgcctcataagcgaatatcctctcaggatacaacaggttcttctctgacatgaatcatgtaagaggt 14579631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 181
Target Start/End: Original strand, 3835692 - 3835765
Alignment:
Q  108 atttatccgcctcataagcgcatatcctcccaagatacaacatgttcttccctgatatgaatcacataagaggt 181  Q
    |||||| | |||||||||||||||||||| || |||||||||  |||||| ||||||| ||||| || ||||||    
T  3835692 atttattcacctcataagcgcatatcctctcaggatacaacaaattcttctctgatataaatcatatcagaggt 3835765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 149
Target Start/End: Original strand, 6591883 - 6591923
Alignment:
Q  109 tttatccgcctcataagcgcatatcctcccaagatacaaca 149  Q
    ||||||||||||||||||||||||||||||| ||| |||||    
T  6591883 tttatccgcctcataagcgcatatcctcccaggatgcaaca 6591923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 2e-17; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 169
Target Start/End: Original strand, 27083122 - 27083183
Alignment:
Q  108 atttatccgcctcataagcgcatatcctcccaagatacaacatgttcttccctgatatgaat 169  Q
    |||||||||||||| ||||||||||||||||| ||||||||| |||||||||| ||||||||    
T  27083122 atttatccgcctcacaagcgcatatcctcccaggatacaacaggttcttccctaatatgaat 27083183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 109 - 171
Target Start/End: Complemental strand, 2590584 - 2590523
Alignment:
Q  109 tttatccgcctcataagcgcatatcctcccaagatacaacatgttcttccctgatatgaatca 171  Q
    ||||| ||||||||||||||||||||||||| ||||||||| ||||||||| | |||||||||    
T  2590584 tttattcgcctcataagcgcatatcctcccaggatacaaca-gttcttccccgttatgaatca 2590523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 109 - 171
Target Start/End: Original strand, 14433633 - 14433695
Alignment:
Q  109 tttatccgcctcataagcgcatatcctcccaagatacaacatgttcttccctgatatgaatca 171  Q
    |||||||||||||||||  || ||| ||||||||||||||||||||||||| | |||||||||    
T  14433633 tttatccgcctcataagtacacatcttcccaagatacaacatgttcttccccgttatgaatca 14433695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 27107367 - 27107315
Alignment:
Q  129 atatcctcccaagatacaacatgttcttccctgatatgaatcacataagaggt 181  Q
    ||||||||||| ||||||||||||||||||||||| | |||||||| ||||||    
T  27107367 atatcctcccaggatacaacatgttcttccctgatgtaaatcacatcagaggt 27107315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 109 - 171
Target Start/End: Original strand, 18739145 - 18739206
Alignment:
Q  109 tttatccgcctcataagcgcatatcctcccaagatacaacatgttcttccctgatatgaatca 171  Q
    |||||||||||||||||||||||||||||||  |||||||  ||||||||| | |||||||||    
T  18739145 tttatccgcctcataagcgcatatcctcccacaatacaac-ggttcttccccgttatgaatca 18739206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 109 - 171
Target Start/End: Complemental strand, 21189485 - 21189424
Alignment:
Q  109 tttatccgcctcataagcgcatatcctcccaagatacaacatgttcttccctgatatgaatca 171  Q
    ||||||||||||||||||||||||||||||  ||||||||| ||| ||||| | |||||||||    
T  21189485 tttatccgcctcataagcgcatatcctccccggatacaaca-gttattccccgttatgaatca 21189424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 108 - 171
Target Start/End: Original strand, 4957 - 5020
Alignment:
Q  108 atttatccgcctcataagcgcatatcctcccaagatacaacatgttcttccctgatatgaatca 171  Q
    ||||||| ||||||||||| |||||||||||||||||||||| |||||||  ||||||||||||    
T  4957 atttatctgcctcataagcacatatcctcccaagatacaacaggttcttctatgatatgaatca 5020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 109 - 171
Target Start/End: Original strand, 1788933 - 1788994
Alignment:
Q  109 tttatccgcctcataagcgcatatcctcccaagatacaacatgttcttccctgatatgaatca 171  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||| | |||||||||    
T  1788933 tttatccgcctcataagcgcatatcctcccaggatacaaca-gttcttccccgttatgaatca 1788994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 148
Target Start/End: Complemental strand, 21347195 - 21347156
Alignment:
Q  109 tttatccgcctcataagcgcatatcctcccaagatacaac 148  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  21347195 tttatccgcctcataagcacatatcctcccaagatacaac 21347156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 109 - 171
Target Start/End: Original strand, 39655733 - 39655794
Alignment:
Q  109 tttatccgcctcataagcgcatatcctcccaagatacaacatgttcttccctgatatgaatca 171  Q
    ||||||||||||||||| ||||||||||||| ||||||||| ||||||| | | |||||||||    
T  39655733 tttatccgcctcataagtgcatatcctcccatgatacaaca-gttcttctccgttatgaatca 39655794  T

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Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 171
Target Start/End: Complemental strand, 17028438 - 17028377
Alignment:
Q  109 tttatccgcctcataagcgcatatcctcccaagatacaacatgttcttccctgatatgaatca 171  Q
    |||||||||||||| |||||||||||||||| ||||  ||| ||||||||| | |||||||||    
T  17028438 tttatccgcctcattagcgcatatcctcccaggatatgaca-gttcttccccgttatgaatca 17028377  T

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Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 171
Target Start/End: Complemental strand, 17558874 - 17558813
Alignment:
Q  109 tttatccgcctcataagcgcatatcctcccaagatacaacatgttcttccctgatatgaatca 171  Q
    |||||||||||||| |||||||||||||||| ||||  ||| ||||||||| | |||||||||    
T  17558874 tttatccgcctcattagcgcatatcctcccaggatatgaca-gttcttccccgttatgaatca 17558813  T

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Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 139
Target Start/End: Original strand, 21185355 - 21185385
Alignment:
Q  109 tttatccgcctcataagcgcatatcctccca 139  Q
    |||||||||||||||||||||||||||||||    
T  21185355 tttatccgcctcataagcgcatatcctccca 21185385  T

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Target: scaffold0076 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 109 - 171
Target Start/End: Original strand, 6794 - 6855
Alignment:
Q  109 tttatccgcctcataagcgcatatcctcccaagatacaacatgttcttccctgatatgaatca 171  Q
    ||||||||||||||||| ||||||||| ||| ||||||||| ||| |||||||||||||||||    
T  6794 tttatccgcctcataagtgcatatccttccatgatacaaca-gtttttccctgatatgaatca 6855  T

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Target: scaffold0014 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 109 - 159
Target Start/End: Complemental strand, 82705 - 82656
Alignment:
Q  109 tttatccgcctcataagcgcatatcctcccaagatacaacatgttcttccc 159  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  82705 tttatccgcctcataagcgcatatcctcccaggatacaaca-gttcttccc 82656  T

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Target: scaffold0216 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 181
Target Start/End: Complemental strand, 12194 - 12125
Alignment:
Q  112 atccgcctcataagcgcatatcctcccaagatacaacatgttcttccctgatatgaatcacataagaggt 181  Q
    |||||||||| ||||||||||| ||| | ||||||||| |||||||||| |||||||||| || ||||||    
T  12194 atccgcctcacaagcgcatatcatcctaggatacaacaagttcttcccttatatgaatcatatcagaggt 12125  T

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Target: scaffold0933 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0933
Description:

Target: scaffold0933; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 116 - 174
Target Start/End: Original strand, 1086 - 1143
Alignment:
Q  116 gcctcataagcgcatatcctcccaagatacaacatgttcttccctgatatgaatcacat 174  Q
    |||||||||| ||||||||||| |  ||||||||||||||||||| |||||||||||||    
T  1086 gcctcataagtgcatatcctcc-agcatacaacatgttcttccctaatatgaatcacat 1143  T

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