View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14644_high_2 (Length: 528)
Name: NF14644_high_2
Description: NF14644
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14644_high_2 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 478; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 478; E-Value: 0
Query Start/End: Original strand, 19 - 528
Target Start/End: Complemental strand, 33300770 - 33300261
Alignment:
| Q |
19 |
gaatctccaatacgtgctgtgttcacttcatagcctctaacatgaaaacagaacttgcttcctaataactcatcaccatatggtgtttttagtcttccat |
118 |
Q |
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| T |
33300770 |
gaatctccaatacgtgctgtgttcacttcatagcctctaacatgaaaacagaacttgcttcctaataactcatcaccatatggtgtttttagtcttccat |
33300671 |
T |
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| Q |
119 |
tgtgaacaaagatttctctatcatttttccatgtctccacgagatttatccgtaccggcgaattcacttctccagcaaagaaagctagctttttcctgtc |
218 |
Q |
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| T |
33300670 |
tgtgaacaaagatttctgtatcatttttccatgtctccacaagatttatccgtaccggcgaattcacttctccagcaaagaaagctagctttttcctgtc |
33300571 |
T |
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| Q |
219 |
aaaatcaatgagttttacttttatatcatgtaataaaatcattgttgcaacgtttctttagaaaaaactttaattgcagtttcggtccgcctatttttaa |
318 |
Q |
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| T |
33300570 |
aaaatcaatgaattttacttttatatcatgtaataaaatcattgttgcaacgtttctttagaaaaaaatttaattgcagtttcggtccgcctatttttaa |
33300471 |
T |
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| Q |
319 |
ttactaacggagttggtcctctattaatttaaaatctagttttttgttgtctagttcatatttttagacccaaaagtggtgatgtatcaagtttttcatt |
418 |
Q |
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|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |
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| T |
33300470 |
ttactaacggggttggtcctctattaatttaaaatctagttttttgttgtctagttcatatttttagacccgaaagtggtgatgtgtcaagtttttcatt |
33300371 |
T |
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| Q |
419 |
cttgtgacataaaactttttgatgtggaatcaaccaagtggattaggttacatgctatgtcaataataaaacatgaactatagaacacatatgattcaga |
518 |
Q |
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| T |
33300370 |
cttgtgacataaaactttttgatgtggaatcaaccaagtggattaggttacatgctatgtcaataataaaacatgaactatagaacacatatgattcaga |
33300271 |
T |
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| Q |
519 |
ataatctacc |
528 |
Q |
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| T |
33300270 |
ataatgtacc |
33300261 |
T |
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