View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14644_high_6 (Length: 393)
Name: NF14644_high_6
Description: NF14644
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14644_high_6 |
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Alignment Details
Target: chr7 (Bit Score: 356; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 356; E-Value: 0
Query Start/End: Original strand, 15 - 378
Target Start/End: Original strand, 47117495 - 47117858
Alignment:
| Q |
15 |
ctcgttcacctatggtaagcttcatgcgagttgaatttactactaatcacattattttgaaaattagtatgaaattttgaaacatctaatttttgtgttg |
114 |
Q |
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| T |
47117495 |
ctcgttcacctatggtaagcttcatgcgagttgaatttactactaatcacattattttgaaaattagtatgaaattttgaaacatctaatttttgtgttg |
47117594 |
T |
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| Q |
115 |
tttctatcagtcaattcgctccactcaggaacaacctctatctgcaagatcacggtcaccaatggtataattggcttcagtaaatagaaccgcttaaatt |
214 |
Q |
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| T |
47117595 |
tttctattagtcaattcgctctactcaggaacaacctctatctgcaagatcacggtcaccaatggtataattggcttcagtaaatagaaccgcttaaatt |
47117694 |
T |
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| Q |
215 |
ttagatcatagttttttgtttggaaatttgaaacttgtggtttgttgttttattagaaatttcgctctgctcaagaacaacctcaatctgcaagacctcg |
314 |
Q |
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| T |
47117695 |
ttagatcatagttttttgtttggaaatttgaaacttgtggtttgttgttttattagaaatttcgctctgctcaagaacaacctcaatctgcaagacctcg |
47117794 |
T |
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| Q |
315 |
ttcccccgcaccagtggtaattggcttcttcaatctcaatttaaataaagtttcaatagattct |
378 |
Q |
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| T |
47117795 |
ttcccccgcaccagtggtaattggcttcttcaatctcaatttaaataaagtttcaatagattct |
47117858 |
T |
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