View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14644_high_7 (Length: 329)
Name: NF14644_high_7
Description: NF14644
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14644_high_7 |
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Alignment Details
Target: chr3 (Bit Score: 277; Significance: 1e-155; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 10 - 315
Target Start/End: Original strand, 54472088 - 54472393
Alignment:
| Q |
10 |
acatcatcatcataaatcatcaccctcgaacaacggcaacaatacaaatgataacaatgggaatcaattgagcgtgggtggtataatagcagttgcaggt |
109 |
Q |
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| T |
54472088 |
acatcatcatcataaatcatcaccctcgaacaacggcaacaatacaaatgataacaatgggaatcaattgagcgtgggtggtataatagcagttgcaggt |
54472187 |
T |
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| Q |
110 |
gcagcttgtataatcctccttgtcattatcctactctgcgttatatgtacaagaaggaagaagagatcacaacctcatcacattcattactaccctactc |
209 |
Q |
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| T |
54472188 |
gcagcttgtataatcctccttgtcattatcctactctgcgttatatgtacaagaaggaagaagagatcacaacctcatcacattcattactaccctactc |
54472287 |
T |
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| Q |
210 |
cagcacacggtatatatttttatatatctcctatttcnnnnnnnaataggaatttgcaaataagcatgttatgaagtttagaatagttaatggaggaagt |
309 |
Q |
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| T |
54472288 |
cagcacacggtatatatttttatatatctcctatttctttttttaataggaatttgcaaataagcatgttatgaagtttagaatagttaatgggggaagc |
54472387 |
T |
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| Q |
310 |
taatta |
315 |
Q |
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|||||| |
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| T |
54472388 |
taatta |
54472393 |
T |
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