View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14644_low_18 (Length: 237)
Name: NF14644_low_18
Description: NF14644
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14644_low_18 |
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Alignment Details
Target: chr1 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 42455638 - 42455859
Alignment:
| Q |
1 |
aacaacatagctgaatataa---tctatagtctattatacacaacaacaaataaaaatatcaagcacgattgtatacgtacattaattcaagaaagctta |
97 |
Q |
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|||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
42455638 |
aacaacatagctgaatataataatctatagtctattatacacaacaacaaatacaaatatcaagtacgattgtatacgtacattaattcaagaaagctta |
42455737 |
T |
|
| Q |
98 |
atttgaatctttgctgaataacatgtccactgcttaagatcaaggaccattcaccacagtcttggttgaagaacatgagtttccaagaggttgataatta |
197 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42455738 |
atttgaatctttgctgaataacatgtccactgcttaagatcaaggaccattcaccacagtcttggttgaagaacatgagtttccaagaggttgataatta |
42455837 |
T |
|
| Q |
198 |
atatatctgcttggggcagaag |
219 |
Q |
| |
|
|||||||||||||||||||||| |
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|
| T |
42455838 |
atatatctgcttggggcagaag |
42455859 |
T |
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