View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14644_low_3 (Length: 500)

Name: NF14644_low_3
Description: NF14644
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14644_low_3
NF14644_low_3
[»] chr4 (49 HSPs)
chr4 (12-294)||(13169037-13169319)
chr4 (136-219)||(42197939-42198022)
chr4 (102-219)||(3159314-3159431)
chr4 (114-219)||(6912044-6912149)
chr4 (161-220)||(393925-393984)
chr4 (14-217)||(7060574-7060781)
chr4 (19-193)||(15182724-15182901)
chr4 (113-217)||(7083475-7083579)
chr4 (161-221)||(45350720-45350780)
chr4 (161-221)||(45360199-45360259)
chr4 (136-219)||(13965929-13966012)
chr4 (136-219)||(27091094-27091177)
chr4 (113-216)||(39837957-39838060)
chr4 (136-219)||(55600198-55600281)
chr4 (113-219)||(6882307-6882413)
chr4 (447-481)||(13168568-13168602)
chr4 (161-219)||(20887409-20887467)
chr4 (136-217)||(626213-626294)
chr4 (114-219)||(18502494-18502599)
chr4 (155-216)||(22121837-22121898)
chr4 (114-219)||(41837678-41837783)
chr4 (139-219)||(8712897-8712977)
chr4 (167-219)||(11209965-11210017)
chr4 (167-219)||(14346827-14346879)
chr4 (167-219)||(29576787-29576839)
chr4 (113-217)||(30202401-30202505)
chr4 (161-217)||(51152526-51152581)
chr4 (136-219)||(8517111-8517194)
chr4 (166-217)||(12716786-12716837)
chr4 (113-220)||(36124008-36124115)
chr4 (136-219)||(43244033-43244116)
chr4 (169-219)||(7084361-7084411)
chr4 (161-219)||(19745801-19745859)
chr4 (161-219)||(19793947-19794005)
chr4 (161-219)||(24100544-24100602)
chr4 (161-219)||(24826050-24826108)
chr4 (113-215)||(31522309-31522411)
chr4 (138-216)||(31932635-31932713)
chr4 (136-218)||(44756692-44756774)
chr4 (156-213)||(7364204-7364261)
chr4 (114-219)||(24611450-24611555)
chr4 (17-66)||(46728737-46728786)
chr4 (160-217)||(50274378-50274435)
chr4 (166-219)||(56236483-56236536)
chr4 (167-219)||(12520015-12520067)
chr4 (159-219)||(19885632-19885692)
chr4 (136-219)||(24568369-24568450)
chr4 (167-219)||(29473994-29474046)
chr4 (175-219)||(38435002-38435046)
[»] scaffold0536 (1 HSPs)
scaffold0536 (114-219)||(3259-3364)
[»] chr6 (21 HSPs)
chr6 (14-219)||(12653970-12654179)
chr6 (136-219)||(15589777-15589860)
chr6 (114-219)||(12481031-12481136)
chr6 (114-219)||(30813421-30813526)
chr6 (113-217)||(29920571-29920675)
chr6 (114-219)||(4660792-4660897)
chr6 (154-218)||(5527301-5527365)
chr6 (139-219)||(23637774-23637854)
chr6 (136-219)||(2488508-2488591)
chr6 (136-219)||(19402504-19402587)
chr6 (136-219)||(21507506-21507589)
chr6 (113-219)||(8693323-8693429)
chr6 (161-219)||(23654660-23654718)
chr6 (102-219)||(31705517-31705634)
chr6 (139-219)||(6295901-6295981)
chr6 (139-219)||(6302711-6302791)
chr6 (119-219)||(35219565-35219665)
chr6 (136-219)||(5146312-5146395)
chr6 (161-219)||(1106515-1106573)
chr6 (114-219)||(14782807-14782912)
chr6 (139-219)||(2304490-2304570)
[»] chr7 (41 HSPs)
chr7 (19-219)||(32741008-32741212)
chr7 (71-219)||(6667712-6667864)
chr7 (113-219)||(2622955-2623061)
chr7 (113-219)||(36253293-36253399)
chr7 (114-219)||(3266738-3266843)
chr7 (114-219)||(46025707-46025812)
chr7 (139-219)||(39989841-39989921)
chr7 (113-216)||(10094803-10094906)
chr7 (136-219)||(44482530-44482613)
chr7 (161-219)||(48304044-48304102)
chr7 (102-219)||(37593435-37593552)
chr7 (114-219)||(41288320-41288425)
chr7 (102-215)||(42603435-42603548)
chr7 (136-219)||(7765529-7765613)
chr7 (156-216)||(10574771-10574831)
chr7 (136-212)||(22747168-22747244)
chr7 (114-218)||(25112851-25112955)
chr7 (160-219)||(21603868-21603927)
chr7 (136-219)||(21991048-21991131)
chr7 (114-217)||(36578995-36579098)
chr7 (160-217)||(11833428-11833485)
chr7 (17-219)||(17473413-17473619)
chr7 (17-219)||(17579595-17579801)
chr7 (167-219)||(4621032-4621084)
chr7 (114-214)||(32643332-32643432)
chr7 (121-212)||(20206157-20206248)
chr7 (160-219)||(26017324-26017383)
chr7 (160-219)||(34871146-34871205)
chr7 (136-219)||(39532627-39532710)
chr7 (111-182)||(47296025-47296096)
chr7 (119-217)||(1280791-1280889)
chr7 (161-219)||(9785728-9785786)
chr7 (139-217)||(24319877-24319955)
chr7 (154-216)||(31725009-31725071)
chr7 (161-219)||(38277208-38277266)
chr7 (119-219)||(9137760-9137861)
chr7 (140-217)||(10624172-10624249)
chr7 (136-217)||(14657575-14657656)
chr7 (166-219)||(39707684-39707737)
chr7 (170-219)||(48643478-48643527)
chr7 (113-209)||(42645018-42645114)
[»] chr5 (30 HSPs)
chr5 (113-216)||(27241418-27241521)
chr5 (113-219)||(42505065-42505169)
chr5 (102-219)||(11734497-11734614)
chr5 (114-219)||(6635612-6635717)
chr5 (113-219)||(32309859-32309965)
chr5 (161-219)||(39179497-39179555)
chr5 (114-219)||(17095893-17095998)
chr5 (114-219)||(17331692-17331797)
chr5 (154-219)||(19200248-19200313)
chr5 (119-219)||(6681529-6681629)
chr5 (136-219)||(7771473-7771556)
chr5 (156-219)||(9196683-9196746)
chr5 (136-219)||(34431450-34431533)
chr5 (113-219)||(20483549-20483655)
chr5 (161-219)||(23881768-23881826)
chr5 (165-219)||(39531060-39531114)
chr5 (113-216)||(3740694-3740798)
chr5 (114-217)||(6281408-6281511)
chr5 (136-219)||(26293996-26294079)
chr5 (160-219)||(29154609-29154668)
chr5 (140-219)||(33164121-33164200)
chr5 (136-219)||(42781387-42781470)
chr5 (113-219)||(17699916-17700022)
chr5 (161-219)||(17732039-17732097)
chr5 (177-219)||(42609583-42609625)
chr5 (114-219)||(26294726-26294831)
chr5 (119-219)||(7151165-7151265)
chr5 (167-219)||(34866828-34866880)
chr5 (167-219)||(40775157-40775209)
chr5 (154-214)||(43415609-43415669)
[»] chr8 (28 HSPs)
chr8 (113-219)||(14600358-14600464)
chr8 (113-219)||(7579515-7579621)
chr8 (113-219)||(24700198-24700303)
chr8 (136-217)||(7281938-7282019)
chr8 (114-219)||(37613000-37613105)
chr8 (160-217)||(41362143-41362200)
chr8 (139-219)||(13570427-13570507)
chr8 (136-219)||(2234130-2234213)
chr8 (161-220)||(26912038-26912097)
chr8 (113-219)||(10951957-10952062)
chr8 (113-219)||(10959962-10960067)
chr8 (161-219)||(24790830-24790888)
chr8 (160-217)||(38545478-38545535)
chr8 (156-220)||(4021156-4021220)
chr8 (163-219)||(5526215-5526271)
chr8 (167-219)||(23767135-23767187)
chr8 (166-217)||(2968931-2968982)
chr8 (160-219)||(5457460-5457519)
chr8 (160-219)||(9501978-9502037)
chr8 (166-216)||(1809901-1809951)
chr8 (167-217)||(9799679-9799729)
chr8 (17-196)||(10338514-10338697)
chr8 (161-219)||(31202859-31202917)
chr8 (113-219)||(43936840-43936946)
chr8 (136-217)||(4757534-4757615)
chr8 (120-197)||(7763431-7763508)
chr8 (113-217)||(13575871-13575975)
chr8 (138-219)||(24210628-24210705)
[»] chr2 (40 HSPs)
chr2 (113-219)||(40038975-40039081)
chr2 (136-220)||(33012434-33012518)
chr2 (113-219)||(4732424-4732531)
chr2 (132-219)||(29543175-29543262)
chr2 (113-219)||(12890769-12890875)
chr2 (119-219)||(13548571-13548672)
chr2 (114-219)||(43696232-43696337)
chr2 (154-213)||(17792861-17792920)
chr2 (136-219)||(38384118-38384201)
chr2 (113-219)||(17267778-17267884)
chr2 (113-219)||(18089064-18089170)
chr2 (113-219)||(20560785-20560891)
chr2 (114-216)||(31908472-31908574)
chr2 (114-219)||(13878661-13878766)
chr2 (114-219)||(14018786-14018891)
chr2 (114-219)||(16136442-16136547)
chr2 (114-219)||(25068205-25068310)
chr2 (139-219)||(36868397-36868477)
chr2 (156-219)||(3527392-3527455)
chr2 (136-219)||(13740306-13740389)
chr2 (113-216)||(44942649-44942752)
chr2 (113-219)||(4739692-4739798)
chr2 (113-219)||(27096052-27096158)
chr2 (161-219)||(35333916-35333974)
chr2 (139-215)||(10286670-10286746)
chr2 (167-219)||(11550332-11550384)
chr2 (119-219)||(27666536-27666635)
chr2 (167-219)||(37884049-37884101)
chr2 (136-219)||(4703517-4703600)
chr2 (160-219)||(15920263-15920322)
chr2 (136-219)||(28230749-28230832)
chr2 (102-219)||(27665887-27666005)
chr2 (136-218)||(28261558-28261640)
chr2 (161-219)||(34416415-34416473)
chr2 (166-219)||(32314841-32314894)
chr2 (169-217)||(4426313-4426361)
chr2 (136-216)||(5754668-5754748)
chr2 (175-219)||(11931276-11931320)
chr2 (154-218)||(16379761-16379825)
chr2 (159-215)||(17304188-17304244)
[»] chr1 (28 HSPs)
chr1 (120-217)||(25032757-25032854)
chr1 (113-219)||(28677791-28677897)
chr1 (138-217)||(12537907-12537986)
chr1 (113-219)||(10304926-10305032)
chr1 (138-219)||(15790928-15791009)
chr1 (140-217)||(17347965-17348042)
chr1 (139-219)||(32784468-32784548)
chr1 (136-219)||(29205654-29205737)
chr1 (160-219)||(42491279-42491338)
chr1 (136-219)||(44517534-44517617)
chr1 (161-219)||(4882029-4882087)
chr1 (12-219)||(12871864-12872075)
chr1 (138-216)||(32301710-32301788)
chr1 (161-219)||(13152836-13152896)
chr1 (161-217)||(3233182-3233238)
chr1 (175-219)||(26199984-26200028)
chr1 (160-219)||(22031768-22031827)
chr1 (153-220)||(43504200-43504267)
chr1 (161-219)||(16141022-16141080)
chr1 (161-219)||(37822015-37822073)
chr1 (114-216)||(45750842-45750944)
chr1 (166-219)||(16574750-16574803)
chr1 (114-219)||(42276719-42276824)
chr1 (159-219)||(18344006-18344066)
chr1 (138-219)||(27535085-27535162)
chr1 (161-217)||(33486690-33486746)
chr1 (167-219)||(34659307-34659359)
chr1 (167-219)||(46589544-46589596)
[»] chr3 (39 HSPs)
chr3 (136-219)||(14585848-14585931)
chr3 (113-219)||(13701662-13701768)
chr3 (98-215)||(11225681-11225798)
chr3 (122-219)||(25111829-25111926)
chr3 (114-219)||(33637758-33637863)
chr3 (136-219)||(38379414-38379497)
chr3 (114-217)||(48401456-48401559)
chr3 (139-217)||(31462417-31462495)
chr3 (161-219)||(49627764-49627822)
chr3 (139-217)||(50981128-50981206)
chr3 (139-217)||(51084262-51084340)
chr3 (167-219)||(19645607-19645659)
chr3 (140-216)||(41598139-41598215)
chr3 (132-219)||(30155950-30156037)
chr3 (136-219)||(41867993-41868076)
chr3 (136-219)||(55090359-55090442)
chr3 (154-216)||(3961445-3961507)
chr3 (161-219)||(11819495-11819553)
chr3 (113-219)||(31270672-31270778)
chr3 (136-217)||(38530310-38530392)
chr3 (113-219)||(53155090-53155196)
chr3 (160-217)||(2192488-2192545)
chr3 (166-219)||(48652109-48652162)
chr3 (136-216)||(32080426-32080506)
chr3 (161-217)||(36691461-36691517)
chr3 (102-219)||(54238683-54238796)
chr3 (136-219)||(36623923-36624006)
chr3 (160-219)||(55455272-55455331)
chr3 (161-219)||(24483356-24483414)
chr3 (139-217)||(42167723-42167801)
chr3 (113-219)||(48855240-48855346)
chr3 (114-219)||(105708-105812)
chr3 (154-207)||(7658400-7658453)
chr3 (114-219)||(39610571-39610675)
chr3 (136-216)||(1074557-1074637)
chr3 (102-150)||(22893443-22893491)
chr3 (167-219)||(25939162-25939214)
chr3 (167-219)||(40461658-40461710)
chr3 (161-217)||(54706394-54706450)
[»] scaffold0202 (1 HSPs)
scaffold0202 (119-217)||(22300-22398)
[»] scaffold0155 (1 HSPs)
scaffold0155 (136-219)||(35461-35544)
[»] scaffold0294 (1 HSPs)
scaffold0294 (113-219)||(3719-3825)
[»] scaffold0432 (1 HSPs)
scaffold0432 (160-217)||(2102-2159)
[»] scaffold0001 (1 HSPs)
scaffold0001 (114-219)||(403900-404005)
[»] scaffold1473 (1 HSPs)
scaffold1473 (145-216)||(1438-1509)
[»] scaffold0321 (1 HSPs)
scaffold0321 (113-219)||(6781-6888)
[»] scaffold0056 (1 HSPs)
scaffold0056 (136-219)||(74550-74633)
[»] scaffold0722 (1 HSPs)
scaffold0722 (159-219)||(5192-5252)
[»] scaffold0157 (1 HSPs)
scaffold0157 (167-219)||(844-896)


Alignment Details
Target: chr4 (Bit Score: 251; Significance: 1e-139; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 12 - 294
Target Start/End: Complemental strand, 13169319 - 13169037
Alignment:
Q  12 catcatcaacgttgcaaattcagaaacatgaatattccagagactgaaatatagttaggtttgtcggcatatgtactatgtcatttctactaacatagtt 111  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||   |||||||||||||||||    
T  13169319 catcatcaacgttgcagattcagaaacatgaatattccagagactgaaatatagttaggtttgtcgccatatgtactatgctgtttctactaacatagtt 13169220  T
Q  112 attgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgttt 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  13169219 attgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatcaatttgaattattgaatatcgttt 13169120  T
Q  212 atttttgtttgcagtacacttgatagaaaaagcatggtaagttaaaataaacattaaatttggtcaatcacaaattaattaaa 294  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13169119 atttttgtttgtggtacacttgatagaaaaagcatggtaagttaaaataaacattaaatttggtcaatcacaaattaattaaa 13169037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 136 - 219
Target Start/End: Original strand, 42197939 - 42198022
Alignment:
Q  136 tcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||||||||||||||  || ||| ||||| |||||||| |||||||| ||| ||||||||| | ||||||||||||||||||||    
T  42197939 tcctttttgtttttagcaaatttgaatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 42198022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 3159314 - 3159431
Alignment:
Q  102 taacatagttattgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattg 201  Q
    |||||| | ||||||| | ||||| | || ||| |||||||||||||||   ||||| ||||| |||||||| |||||||||||| ||||||||| | ||    
T  3159314 taacatggatattgtgagattgtttgcagattcatcctttttgtttttagtgactttgaatttgtattgtatcgatgtactttatcaatttgaatgaatg 3159413  T
Q  202 aatatcgtttatttttgt 219  Q
    ||||| ||||| ||||||    
T  3159414 aatatagtttaattttgt 3159431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 114 - 219
Target Start/End: Original strand, 6912044 - 6912149
Alignment:
Q  114 tgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttat 213  Q
    |||| ||||||||  || ||| |||||||||||||||   | ||| ||||| ||||||||||||||||| ||| ||||||||| | |||||| |||||||    
T  6912044 tgtgagtttgttcacagattcatcctttttgtttttagcgaatttgaatttgtattgtattgatgtactctatcaatttgaatgaatgaataacgtttat 6912143  T
Q  214 ttttgt 219  Q
    ||||||    
T  6912144 ttttgt 6912149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 161 - 220
Target Start/End: Complemental strand, 393984 - 393925
Alignment:
Q  161 atttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgtt 220  Q
    |||| |||||||| |||||||||||| ||||||||| | |||||||||||||||||||||    
T  393984 atttgtattgtatcgatgtactttatcaatttgaatgaatgaatatcgtttatttttgtt 393925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 14 - 217
Target Start/End: Original strand, 7060574 - 7060781
Alignment:
Q  14 tcatcaacgttgcaaattcagaaacatgaatattccagagactgaaatatagttaggtttgtcggcatatgtactatgtcattt----ctactaacatag 109  Q
    |||||||||||||| || |||| |||||| |||||| |||||   |||||||| |  ||||| |||||| ||||| | || |||    ||| |||||| |    
T  7060574 tcatcaacgttgcagatccagagacatgagtattccggagacatgaatatagtcatatttgtaggcataggtactttatcgttttatgctattaacatgg 7060673  T
Q  110 ttattgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgt 209  Q
     | ||||| ||||||||  | |||| |||||||||||||||   | |||  |||| ||||||||  ||||||| ||| ||||||||| | ||||||||||    
T  7060674 atgttgtgagtttgttcacattttcatcctttttgtttttagcgaatttggatttgtattgtatcaatgtactctatcaatttgaatgaatgaatatcgt 7060773  T
Q  210 ttattttt 217  Q
    ||||||||    
T  7060774 ttattttt 7060781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 193
Target Start/End: Original strand, 15182724 - 15182901
Alignment:
Q  19 aacgttgcaaattcagaaacatgaatattccagagactgaaatatagttaggtttgtcggcatatgtactatgtcat----ttctactaacatagttatt 114  Q
    ||||||||| ||||| |||||||| |||||||||||||  |||||| | |  ||||| ||||||||||||||||| |    | ||| ||| |||| | ||    
T  15182724 aacgttgcagattcaaaaacatgagtattccagagacttgaatatattcacatttgtaggcatatgtactatgtcgttgtatgctattaatatagatgtt 15182823  T
Q  115 gtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttg 193  Q
    ||| ||||||||| || ||| ||| |||| ||||||   ||||| || ||||||| |||||||||||| ||| ||||||    
T  15182824 gtgagtttgttcgcagattcatccattttatttttagcgactttgaa-ttatattatattgatgtactctatcaatttg 15182901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 113 - 217
Target Start/End: Complemental strand, 7083579 - 7083475
Alignment:
Q  113 ttgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgttta 212  Q
    ||||| ||||||||  || ||| |||||||| ||||||   | ||| |||||||||||||| |||||||| ||| ||||||| | | |||||||||||||    
T  7083579 ttgtgagtttgttcacagattcatcctttttatttttagcgaatttgaatttatattgtatcgatgtactctatcaatttgagtgaatgaatatcgttta 7083480  T
Q  213 ttttt 217  Q
    |||||    
T  7083479 ttttt 7083475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 161 - 221
Target Start/End: Complemental strand, 45350780 - 45350720
Alignment:
Q  161 atttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgttt 221  Q
    |||| |||||||| |||||||| ||| ||||||||| | ||||||||||||||||||||||    
T  45350780 atttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgttt 45350720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 161 - 221
Target Start/End: Complemental strand, 45360259 - 45360199
Alignment:
Q  161 atttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgttt 221  Q
    |||| |||||||| |||||||| ||| ||||||||| | ||||||||||||||||||||||    
T  45360259 atttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgttt 45360199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 136 - 219
Target Start/End: Original strand, 13965929 - 13966012
Alignment:
Q  136 tcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||||||||||||||   | |||  |||| |||||||| |||||||| ||| ||||||||| | ||||||||||||||||||||    
T  13965929 tcctttttgtttttagggaatttggatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 13966012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 136 - 219
Target Start/End: Original strand, 27091094 - 27091177
Alignment:
Q  136 tcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||||||||||||||   |||||  |||| |||||||| |||||||| ||| ||||||||| | | ||||||||||||||||||    
T  27091094 tcctttttgtttttaatgactttggatttgtattgtatcgatgtactctatcaatttgaatgaataaatatcgtttatttttgt 27091177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 113 - 216
Target Start/End: Original strand, 39837957 - 39838060
Alignment:
Q  113 ttgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgttta 212  Q
    ||||| ||||||||  || ||| |||||||||||||||  || |||  |||| |||||||||||| |||| ||  ||||||||| | |||||||||||||    
T  39837957 ttgtgagtttgttcacagattcatcctttttgtttttagcaaatttggatttctattgtattgatatactctaacaatttgaatgaatgaatatcgttta 39838056  T
Q  213 tttt 216  Q
    ||||    
T  39838057 tttt 39838060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 136 - 219
Target Start/End: Complemental strand, 55600281 - 55600198
Alignment:
Q  136 tcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||||||||||||||   | |||| |||| |||||||| |||| ||| ||| ||||||||| | ||||||||||||||||||||    
T  55600281 tcctttttgtttttagtgattttagatttgtattgtatcgatgcactctatcaatttgaatgaatgaatatcgtttatttttgt 55600198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 219
Target Start/End: Original strand, 6882307 - 6882413
Alignment:
Q  113 ttgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgttta 212  Q
    ||||| ||||||||  || ||| |||||||||||||||   | |||  |||| |||||||| |||||||| ||| ||||||||| | |||||||||||||    
T  6882307 ttgtgagtttgttcagagattcatcctttttgtttttagcgaatttggatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgttta 6882406  T
Q  213 tttttgt 219  Q
     ||||||    
T  6882407 cttttgt 6882413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 447 - 481
Target Start/End: Complemental strand, 13168602 - 13168568
Alignment:
Q  447 gcatcaaataaaaaagatatgttaaagatgcactc 481  Q
    |||||||||||||||||||||||||||||||||||    
T  13168602 gcatcaaataaaaaagatatgttaaagatgcactc 13168568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 20887467 - 20887409
Alignment:
Q  161 atttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    ||||||||||||| |||||||| ||| ||||| ||| | ||||||||||||||||||||    
T  20887467 atttatattgtatcgatgtactctatcaatttaaatgaatgaatatcgtttatttttgt 20887409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 136 - 217
Target Start/End: Complemental strand, 626294 - 626213
Alignment:
Q  136 tcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttattttt 217  Q
    |||||||||||||||  || ||| ||||| |||||||| |||||||| ||| ||||||||| | ||||| || |||||||||    
T  626294 tcctttttgtttttagcaaatttgaatttgtattgtatcgatgtactctatcaatttgaatgaatgaatttcatttattttt 626213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 114 - 219
Target Start/End: Complemental strand, 18502599 - 18502494
Alignment:
Q  114 tgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttat 213  Q
    |||| ||||||||  || ||| |||||||||||||||   | |||  |||| |||||||| |||||||| ||| ||||| ||| | ||||||||||||||    
T  18502599 tgtgagtttgttcacagattcatcctttttgtttttagcgaatttggatttgtattgtatcgatgtactctatcaatttaaatgaatgaatatcgtttat 18502500  T
Q  214 ttttgt 219  Q
    ||||||    
T  18502499 ttttgt 18502494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 155 - 216
Target Start/End: Original strand, 22121837 - 22121898
Alignment:
Q  155 ctttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttt 216  Q
    |||| ||||| ||||||||||||||||| ||| || || ||| |||||||||||||||||||    
T  22121837 ctttgaatttgtattgtattgatgtactctatcaaattaaatgattgaatatcgtttatttt 22121898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 114 - 219
Target Start/End: Original strand, 41837678 - 41837783
Alignment:
Q  114 tgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttat 213  Q
    |||| ||||||||| || ||| | || ||||||||||   ||||| ||||| || |||||||||||||| ||| ||||||||| | | | ||||||||||    
T  41837678 tgtgagtttgttcggagattcattctctttgtttttaacgactttgaatttgtagtgtattgatgtactctatcaatttgaatgaataattatcgtttat 41837777  T
Q  214 ttttgt 219  Q
    ||||||    
T  41837778 ttttgt 41837783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 139 - 219
Target Start/End: Original strand, 8712897 - 8712977
Alignment:
Q  139 tttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    ||||||||||||   | |||| |||| |||||||| |||||||| ||| ||||||||| | | ||||||||||||||||||    
T  8712897 tttttgtttttagtgaatttagatttgtattgtatcgatgtactctatcaatttgaatgaataaatatcgtttatttttgt 8712977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 167 - 219
Target Start/End: Complemental strand, 11210017 - 11209965
Alignment:
Q  167 attgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||||||||||||||| ||| ||||||||| | |||||||| |||||||||||    
T  11210017 attgtattgatgtactctatcaatttgaatgaatgaatatcttttatttttgt 11209965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 167 - 219
Target Start/End: Original strand, 14346827 - 14346879
Alignment:
Q  167 attgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    ||||||| |||||||| ||| ||||||||| | ||||||||||||||||||||    
T  14346827 attgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 14346879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 167 - 219
Target Start/End: Complemental strand, 29576839 - 29576787
Alignment:
Q  167 attgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    ||||||||||| |||||||| ||||||||| | |||||||| |||||||||||    
T  29576839 attgtattgatatactttatcaatttgaatgaatgaatatcatttatttttgt 29576787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 217
Target Start/End: Original strand, 30202401 - 30202505
Alignment:
Q  113 ttgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgttta 212  Q
    ||||| ||||||||  |||||| |||||||||||| ||   | |||| |||| |||||||| |||||||| ||| ||||||| | | |||||||||||||    
T  30202401 ttgtgagtttgttcacagtttcatcctttttgtttctagcgaatttagatttgtattgtatagatgtactctatcaatttgattgaatgaatatcgttta 30202500  T
Q  213 ttttt 217  Q
     ||||    
T  30202501 ctttt 30202505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 51152526 - 51152581
Alignment:
Q  161 atttatattgtattgatgtactttatgaatttgaattattgaatatcgtttattttt 217  Q
    |||| |||||||| |||||||||||| ||||||||| | ||||||||||||||||||    
T  51152526 atttgtattgtatcgatgtactttatcaatttgaatga-tgaatatcgtttattttt 51152581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 219
Target Start/End: Complemental strand, 8517194 - 8517111
Alignment:
Q  136 tcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||||||||||||||   | |||  |||| ||||||||  ||||||| ||| ||||||||| | ||||||||||||||||||||    
T  8517194 tcctttttgtttttagcgaatttggatttgtattgtatcaatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 8517111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 166 - 217
Target Start/End: Complemental strand, 12716837 - 12716786
Alignment:
Q  166 tattgtattgatgtactttatgaatttgaattattgaatatcgtttattttt 217  Q
    |||||||| |||||| ||||| ||||||||| | ||||||||||||||||||    
T  12716837 tattgtatcgatgtaatttatcaatttgaataaatgaatatcgtttattttt 12716786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 220
Target Start/End: Complemental strand, 36124115 - 36124008
Alignment:
Q  113 ttgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgttta 212  Q
    ||||| ||||||||  || ||| |||||||||||||||   | |||  |||| |||||||| |||| ||| ||| ||||||||  | |||||||||||||    
T  36124115 ttgtgagtttgttcacagattcatcctttttgtttttagcgaatttggatttgtattgtatcgatggactctatcaatttgaaagaatgaatatcgttta 36124016  T
Q  213 tttttgtt 220  Q
    ||||||||    
T  36124015 tttttgtt 36124008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 219
Target Start/End: Complemental strand, 43244116 - 43244033
Alignment:
Q  136 tcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||||||||||||||   | |||  |||| |||||||| | |||||| ||| ||||||||| | ||||||||||||||||||||    
T  43244116 tcctttttgtttttagcgaatttggatttgtattgtatcggtgtactctatcaatttgaatgaatgaatatcgtttatttttgt 43244033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 219
Target Start/End: Original strand, 7084361 - 7084411
Alignment:
Q  169 tgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    ||||| |||||||| ||| ||||||||| | ||||||||||||||||||||    
T  7084361 tgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 7084411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 19745801 - 19745859
Alignment:
Q  161 atttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||| |||||||| ||| |||| ||| ||||| ||| ||||||||||||||||||||||    
T  19745801 atttgtattgtatcgatatactctatcaatttaaatgattgaatatcgtttatttttgt 19745859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 19794005 - 19793947
Alignment:
Q  161 atttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||| |||||||| ||| |||| ||| ||||| ||| ||||||||||||||||||||||    
T  19794005 atttgtattgtatcgatatactctatcaatttaaatgattgaatatcgtttatttttgt 19793947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 24100544 - 24100602
Alignment:
Q  161 atttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||| |||||||| |||||||| ||| ||||||||| | |||||||| |||||||||||    
T  24100544 atttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcatttatttttgt 24100602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 24826050 - 24826108
Alignment:
Q  161 atttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||| |||| ||| |||||||| ||| ||||||||| | ||||||||||||||||||||    
T  24826050 atttgtattctatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 24826108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 215
Target Start/End: Original strand, 31522309 - 31522411
Alignment:
Q  113 ttgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgttta 212  Q
    ||||| ||||||||  || ||| |||||||||||||||   | |||  | || |||||||| |||||||| ||| ||||||||| | |||||||||||||    
T  31522309 ttgtgagtttgttcacagattcatcctttttgtttttagcgaatttggacttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgttta 31522408  T
Q  213 ttt 215  Q
    |||    
T  31522409 ttt 31522411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 138 - 216
Target Start/End: Original strand, 31932635 - 31932713
Alignment:
Q  138 ctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttt 216  Q
    |||||||||||||   | ||| ||||| |||||| | |||||||||||| ||||||||| | |||||||||||| ||||    
T  31932635 ctttttgtttttaacgattttgaatttgtattgtgtcgatgtactttatcaatttgaatgaatgaatatcgtttttttt 31932713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 136 - 218
Target Start/End: Complemental strand, 44756774 - 44756692
Alignment:
Q  136 tcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttg 218  Q
    |||||||||||||||   | ||| ||||| |||||||  |||||||| ||| |||||| || | |||||||||||||||||||    
T  44756774 tcctttttgtttttagcgaatttgaatttctattgtaccgatgtactctatcaatttggatgaatgaatatcgtttatttttg 44756692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 213
Target Start/End: Complemental strand, 7364261 - 7364204
Alignment:
Q  156 tttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttat 213  Q
    |||||||||||||| |||||||||| ||||| ||||| ||| | | ||||||||||||    
T  7364261 tttaaatttatattttattgatgtattttatcaatttcaatgaataaatatcgtttat 7364204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 114 - 219
Target Start/End: Complemental strand, 24611555 - 24611450
Alignment:
Q  114 tgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttat 213  Q
    |||| ||||||||  || ||| |||||||||||||||   | |||| |||| ||||||||  ||||||| ||| ||||||||| | |||||||| ||||     
T  24611555 tgtgagtttgttcacagattcatcctttttgtttttagcgaatttagatttgtattgtatcaatgtactctatcaatttgaatgaatgaatatcatttac 24611456  T
Q  214 ttttgt 219  Q
    ||||||    
T  24611455 ttttgt 24611450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 46728786 - 46728737
Alignment:
Q  17 tcaacgttgcaaattcagaaacatgaatattccagagactgaaatatagt 66  Q
    |||||||||||||||| || |||||  ||||||||||||| |||||||||    
T  46728786 tcaacgttgcaaattcggagacatgggtattccagagacttaaatatagt 46728737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 50274435 - 50274378
Alignment:
Q  160 aatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttattttt 217  Q
    ||||||||||||||  ||||||||||| ||||| ||| | | ||||||||||||||||    
T  50274435 aatttatattgtatcaatgtactttattaatttaaatgaataaatatcgtttattttt 50274378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 166 - 219
Target Start/End: Complemental strand, 56236536 - 56236483
Alignment:
Q  166 tattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||||||| |||||||| ||| ||||||||| | |||||||| |||||||||||    
T  56236536 tattgtatcgatgtactctatcaatttgaatgaatgaatatcatttatttttgt 56236483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 167 - 219
Target Start/End: Original strand, 12520015 - 12520067
Alignment:
Q  167 attgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    ||||||| |||||||| ||| ||||||||| | |||||||| |||||||||||    
T  12520015 attgtatcgatgtactctataaatttgaataaatgaatatcatttatttttgt 12520067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 159 - 219
Target Start/End: Complemental strand, 19885692 - 19885632
Alignment:
Q  159 aaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    ||||||| ||||||||||| |||| ||| ||||||||| | |||||||  |||||||||||    
T  19885692 aaatttaaattgtattgatatactgtatcaatttgaataaatgaatataatttatttttgt 19885632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 136 - 219
Target Start/End: Complemental strand, 24568450 - 24568369
Alignment:
Q  136 tcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||||||||||||||   | ||| |||||||||||||| |||||| | ||| ||||||||| | ||||||||  ||||||||||    
T  24568450 tcctttttgtttttagcgaatttgaatttatattgtatcgatgtaatctatcaatttgaatgaatgaatatc--ttatttttgt 24568369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 167 - 219
Target Start/End: Complemental strand, 29474046 - 29473994
Alignment:
Q  167 attgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||||||||||||||| ||  ||||||||| | |||||||| |||||||||||    
T  29474046 attgtattgatgtactctaccaatttgaatgaatgaatatcttttatttttgt 29473994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 175 - 219
Target Start/End: Original strand, 38435002 - 38435046
Alignment:
Q  175 gatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||||||| ||| ||||||||| | ||||||||||||||||||||    
T  38435002 gatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 38435046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 114 - 219
Target Start/End: Original strand, 3259 - 3364
Alignment:
Q  114 tgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttat 213  Q
    |||| |||||||| ||| ||| |||||||||||||||   | |||||||||||||||||| |||||||| ||| ||||||||| | ||||||||||||||    
T  3259 tgtgagtttgttcatagattcatcctttttgtttttagcgaatttaaatttatattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttat 3358  T
Q  214 ttttgt 219  Q
    ||||||    
T  3359 ttttgt 3364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 8e-19; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 14 - 219
Target Start/End: Complemental strand, 12654179 - 12653970
Alignment:
Q  14 tcatcaacgttgcaaattcagaaacatgaatattccagagactgaaatatagttaggtttgtcggcatatgtactatgtcattt----ctactaacatag 109  Q
    |||||||||||||| |||| || |||||| |||||| ||||||  |||||||| |  ||||| |||||||||| | |||| |||    ||| |||||| |    
T  12654179 tcatcaacgttgcagattcggagacatgagtattccggagacttgaatatagtcatatttgtaggcatatgtattttgtcgttttatgctattaacatgg 12654080  T
Q  110 ttattgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgt 209  Q
     |  |||| ||||||||| || ||| || ||||||||||||   |||||  | || |||||||| |||||||| ||| ||||||||| | ||||||||||    
T  12654079 atgatgtgagtttgttcgcagattcatcatttttgtttttagcgactttggaattgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgt 12653980  T
Q  210 ttatttttgt 219  Q
    ||||||||||    
T  12653979 ttatttttgt 12653970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 136 - 219
Target Start/End: Complemental strand, 15589860 - 15589777
Alignment:
Q  136 tcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||||||||||||||  || |||  ||||||||||||| |||||||| ||| ||||||||| | ||||||||||||||||||||    
T  15589860 tcctttttgtttttagcaaatttggatttatattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 15589777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 114 - 219
Target Start/End: Complemental strand, 12481136 - 12481031
Alignment:
Q  114 tgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttat 213  Q
    |||| ||||||||  || ||| || ||||||||||||  || |||  |||| |||||||| |||||||||||| ||||||||| | ||||||||||||||    
T  12481136 tgtgagtttgttcacagattcatcttttttgtttttagcaaatttggatttgtattgtatcgatgtactttatcaatttgaatgaatgaatatcgtttat 12481037  T
Q  214 ttttgt 219  Q
    ||||||    
T  12481036 ttttgt 12481031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 114 - 219
Target Start/End: Original strand, 30813421 - 30813526
Alignment:
Q  114 tgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttat 213  Q
    |||| ||||||||  || ||| |||||||||||||||   | ||| ||||| |||||||| |||||||| ||| ||||||||| | ||||||||||||||    
T  30813421 tgtgagtttgttcacagattcatcctttttgtttttagcgaatttgaatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttat 30813520  T
Q  214 ttttgt 219  Q
    ||||||    
T  30813521 ttttgt 30813526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 113 - 217
Target Start/End: Complemental strand, 29920675 - 29920571
Alignment:
Q  113 ttgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgttta 212  Q
    ||||| |||||||| ||| ||| |||||||||||||||   | ||||||||| || ||||| |||||||||||| ||||||||| |  ||||||||||||    
T  29920675 ttgtgagtttgttcatagattcatcctttttgtttttagcgaatttaaatttgtaatgtatcgatgtactttatcaatttgaatgaacgaatatcgttta 29920576  T
Q  213 ttttt 217  Q
     ||||    
T  29920575 ctttt 29920571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 114 - 219
Target Start/End: Original strand, 4660792 - 4660897
Alignment:
Q  114 tgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttat 213  Q
    |||| |||||||| ||| ||| |||||||||||||||   | |||  | || |||||||| |||||||| ||| ||||||||| | ||||||||||||||    
T  4660792 tgtgagtttgttcatagattcatcctttttgtttttagtgaatttggaattgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttat 4660891  T
Q  214 ttttgt 219  Q
    ||||||    
T  4660892 ttttgt 4660897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 154 - 218
Target Start/End: Complemental strand, 5527365 - 5527301
Alignment:
Q  154 actttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttg 218  Q
    ||||| ||||||||||||||||||||||| ||| |||| |||| | |||||||| ||||||||||    
T  5527365 actttgaatttatattgtattgatgtactctatcaattcgaatgaatgaatatcatttatttttg 5527301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 139 - 219
Target Start/End: Complemental strand, 23637854 - 23637774
Alignment:
Q  139 tttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    ||||||||||||  ||  || ||||| |||||||| |||||||||||| ||||||||| | ||||| ||||||||||||||    
T  23637854 tttttgtttttagcaaaattgaatttgtattgtatcgatgtactttattaatttgaatgaatgaatgtcgtttatttttgt 23637774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 136 - 219
Target Start/End: Original strand, 2488508 - 2488591
Alignment:
Q  136 tcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||||||||||||||   |||||  |||| |||||||| |||||||| ||| ||||||||| | | ||||||||||||||||||    
T  2488508 tcctttttgtttttaatgactttggatttgtattgtatcgatgtactctatcaatttgaatgaataaatatcgtttatttttgt 2488591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 136 - 219
Target Start/End: Complemental strand, 19402587 - 19402504
Alignment:
Q  136 tcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||||||||||||||   | |||  |||| |||||||| |||||||| ||| ||||||||| | ||||||||||||||||||||    
T  19402587 tcctttttgtttttaacgaatttggatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 19402504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 136 - 219
Target Start/End: Complemental strand, 21507589 - 21507506
Alignment:
Q  136 tcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||||||||||||||   | |||  |||| ||||||||||||||||| ||| | ||||||| | ||||||||||||||||||||    
T  21507589 tcctttttgtttttagcgaatttggatttgtattgtattgatgtactctatcagtttgaatgaatgaatatcgtttatttttgt 21507506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 219
Target Start/End: Complemental strand, 8693429 - 8693323
Alignment:
Q  113 ttgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgttta 212  Q
    ||||| ||||||||  || ||| |||||||||||||||   | |||  |||| |||||||| |||||||| ||| ||||||||| | | |||||||||||    
T  8693429 ttgtgagtttgttcacagattcatcctttttgtttttagtgaatttggatttgtattgtatcgatgtactctatcaatttgaatgaataaatatcgttta 8693330  T
Q  213 tttttgt 219  Q
    |||||||    
T  8693329 tttttgt 8693323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 23654660 - 23654718
Alignment:
Q  161 atttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||| |||||||| |||||||| ||| ||||||||| | ||||||||||||||||||||    
T  23654660 atttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 23654718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 31705517 - 31705634
Alignment:
Q  102 taacatagttattgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattg 201  Q
    |||||||| | ||||| ||||||||  || ||  |||||||| ||||||   | ||| ||||| |||||||| |||||||| ||| ||||| ||| | ||    
T  31705517 taacatagatgttgtgagtttgttcacagatttatcctttttatttttagccaatttgaatttgtattgtatcgatgtactctatcaatttaaatgaatg 31705616  T
Q  202 aatatcgtttatttttgt 219  Q
    ||||||||||||||||||    
T  31705617 aatatcgtttatttttgt 31705634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 139 - 219
Target Start/End: Complemental strand, 6295981 - 6295901
Alignment:
Q  139 tttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    ||||||||||||  || ||| ||||| |||||||| |||||||| ||| ||||||||| | |||||||  |||||||||||    
T  6295981 tttttgtttttagcaaatttgaatttgtattgtatcgatgtactctatcaatttgaatgaatgaatattatttatttttgt 6295901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 139 - 219
Target Start/End: Complemental strand, 6302791 - 6302711
Alignment:
Q  139 tttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    ||||||||||||  || ||| ||||| |||||||| |||||||| ||| ||||||||| | |||||||  |||||||||||    
T  6302791 tttttgtttttagcaaatttgaatttgtattgtatcgatgtactctatcaatttgaatgaatgaatattatttatttttgt 6302711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 219
Target Start/End: Complemental strand, 35219665 - 35219565
Alignment:
Q  119 gtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttg 218  Q
    ||||||||  || ||| |||||||||||||||   | |||  |||| |||||||| |||||||| ||  ||||||||| | |||||||||||||||||||    
T  35219665 gtttgttcacagattcatcctttttgtttttagcgaatttggatttgtattgtatcgatgtactctaccaatttgaatgaatgaatatcgtttatttttg 35219566  T
Q  219 t 219  Q
    |    
T  35219565 t 35219565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 219
Target Start/End: Original strand, 5146312 - 5146395
Alignment:
Q  136 tcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||||||||||||||   | |||  |||| |||| ||| |||||||| ||| ||||||||| | ||||||||||||||||||||    
T  5146312 tcctttttgtttttagcgaatttggatttgtattatatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 5146395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 1106573 - 1106515
Alignment:
Q  161 atttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||| |||||||| |||||||| ||| ||| ||||| | ||||||||||||||||||||    
T  1106573 atttgtattgtatcgatgtactctatcaatctgaatgaatgaatatcgtttatttttgt 1106515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 114 - 219
Target Start/End: Complemental strand, 14782912 - 14782807
Alignment:
Q  114 tgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttat 213  Q
    |||| ||||||||  || ||| |||||||||||||||   | |||  |||| |||||||| |||||||| ||| ||||||||| | ||||||||  ||||    
T  14782912 tgtgagtttgttcacagattcatcctttttgtttttagcgaatttggatttgtattgtatcgatgtactctatcaatttgaatgactgaatatctattat 14782813  T
Q  214 ttttgt 219  Q
    ||||||    
T  14782812 ttttgt 14782807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 139 - 219
Target Start/End: Complemental strand, 2304570 - 2304490
Alignment:
Q  139 tttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    ||||||||||||   | ||||||||| ||||| || |||||||| ||| ||||| ||| | ||||||||||||| ||||||    
T  2304570 tttttgtttttagcgaatttaaatttgtattgcatcgatgtactctatcaatttaaatgaatgaatatcgtttacttttgt 2304490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 3e-18; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 19 - 219
Target Start/End: Original strand, 32741008 - 32741212
Alignment:
Q  19 aacgttgcaaattcagaaacatgaatattccagagactgaaatatagttaggtttgtcggcatatgtactatgtcattt----ctactaacatagttatt 114  Q
    |||||||||||| | || |||||| ||||||||||||  ||||||||| |  ||||| ||||||| |||| |||  |||    ||| |||||| | | ||    
T  32741008 aacgttgcaaatccggagacatgagtattccagagacataaatatagtcatatttgtaggcatatatactttgttgttttatgctattaacatggatgtt 32741107  T
Q  115 gtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatt 214  Q
    ||| ||||||||  || ||| |||||||||||||||   | |||| |||| |||||||| ||| |||| ||| ||||||||| | |||||||||||||||    
T  32741108 gtgagtttgttcacagattcatcctttttgtttttagtgaatttagatttgtattgtatcgatatactctatcaatttgaataaatgaatatcgtttatt 32741207  T
Q  215 tttgt 219  Q
    |||||    
T  32741208 tttgt 32741212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 71 - 219
Target Start/End: Original strand, 6667712 - 6667864
Alignment:
Q  71 tttgtcggcatatgtactatgtcattt----ctactaacatagttattgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttat 166  Q
    ||||| |||||||||||| || |||||    ||| |||||| | | ||||| |||||||| ||| ||| |||||||||||||||   | ||| ||||| |    
T  6667712 tttgtaggcatatgtactttgccattttatgctattaacatggatgttgtgagtttgttcatagattcatcctttttgtttttagcgaatttgaatttgt 6667811  T
Q  167 attgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    ||||||| ||||| || ||| ||||||||| | ||||||||||||||||||||    
T  6667812 attgtatcgatgtgctctatcaatttgaatgaatgaatatcgtttatttttgt 6667864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 113 - 219
Target Start/End: Original strand, 2622955 - 2623061
Alignment:
Q  113 ttgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgttta 212  Q
    ||||| ||||||||  || ||| || ||||||||||||  || |||| ||||||||| ||| |||||||| ||| ||||||||| | |||||||||||||    
T  2622955 ttgtgagtttgttcacagattcatcatttttgtttttatcaaatttagatttatattatatagatgtactctatcaatttgaatgaatgaatatcgttta 2623054  T
Q  213 tttttgt 219  Q
    |||||||    
T  2623055 tttttgt 2623061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 113 - 219
Target Start/End: Original strand, 36253293 - 36253399
Alignment:
Q  113 ttgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgttta 212  Q
    ||||| ||||||||  || |||||||||||||||||||  || |||  |||| |||||||| |||||||| ||| ||||||||| | ||| |||||||||    
T  36253293 ttgtgagtttgttcacagattcttcctttttgtttttagcaaatttggatttgtattgtatcgatgtactctatcaatttgaatgaatgagtatcgttta 36253392  T
Q  213 tttttgt 219  Q
    |||||||    
T  36253393 tttttgt 36253399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 114 - 219
Target Start/End: Original strand, 3266738 - 3266843
Alignment:
Q  114 tgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttat 213  Q
    |||| |||||||| ||| ||| |||||||||||||||   | ||| ||||| ||||||||  ||||||||||| ||||||||| | ||||||| ||||||    
T  3266738 tgtgagtttgttcatagattcatcctttttgtttttaacgaatttgaatttgtattgtatcaatgtactttatcaatttgaatgaatgaatattgtttat 3266837  T
Q  214 ttttgt 219  Q
    ||||||    
T  3266838 ttttgt 3266843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 114 - 219
Target Start/End: Complemental strand, 46025812 - 46025707
Alignment:
Q  114 tgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttat 213  Q
    |||| ||||||||  || ||| |||||||||||||||   | |||  |||| |||||||| |||||||||||| ||||||||| | ||||||||||||||    
T  46025812 tgtgagtttgttcaaagattcatcctttttgtttttagcgaatttggatttgtattgtatcgatgtactttatcaatttgaatgaatgaatatcgtttat 46025713  T
Q  214 ttttgt 219  Q
    ||||||    
T  46025712 ttttgt 46025707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 139 - 219
Target Start/End: Complemental strand, 39989921 - 39989841
Alignment:
Q  139 tttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    ||||| ||||||  |||||||||||||||||||||||| ||||| ||| |||||||||   |||||||| |||||||||||    
T  39989921 tttttatttttagcaactttaaatttatattgtattgacgtactctatcaatttgaatgcatgaatatcatttatttttgt 39989841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 113 - 216
Target Start/End: Original strand, 10094803 - 10094906
Alignment:
Q  113 ttgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgttta 212  Q
    ||||| ||||||||  || ||| |||||||||||||||  || ||| ||||| ||||||||| || |||| ||| ||||||||| | |||||||||||||    
T  10094803 ttgtgagtttgttcacagattcatcctttttgtttttagcaaatttgaatttctattgtattaatatactctatcaatttgaatgaatgaatatcgttta 10094902  T
Q  213 tttt 216  Q
    ||||    
T  10094903 tttt 10094906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 219
Target Start/End: Complemental strand, 44482613 - 44482530
Alignment:
Q  136 tcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||||||||||||||  || |||  ||||||||| ||| |||||||| ||| ||||||||| | ||||||||||||||||||||    
T  44482613 tcctttttgtttttagcaaatttggatttatattatatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 44482530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 48304102 - 48304044
Alignment:
Q  161 atttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||| |||||||| |||||||||||| ||||||||| | ||||||||||||||||||||    
T  48304102 atttgtattgtatcgatgtactttatcaatttgaatgaatgaatatcgtttatttttgt 48304044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 37593435 - 37593552
Alignment:
Q  102 taacatagttattgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattg 201  Q
    |||||| | ||||||| ||||||||  || ||| || ||||||||||||   | |||| |||| |||||||| ||||||||  || ||||||||| | ||    
T  37593435 taacatggatattgtgagtttgttcacagattcatcatttttgtttttagcgaatttagatttgtattgtatcgatgtactccatcaatttgaatgaatg 37593534  T
Q  202 aatatcgtttatttttgt 219  Q
    ||||||||||||||||||    
T  37593535 aatatcgtttatttttgt 37593552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 114 - 219
Target Start/End: Original strand, 41288320 - 41288425
Alignment:
Q  114 tgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttat 213  Q
    |||| ||||||||  || ||| |||||||||||||||   | ||| ||||| |||||||| |||||||| ||| ||||||||| |  |||||||||||||    
T  41288320 tgtgagtttgttcacagattcatcctttttgtttttagtgaatttgaatttgtattgtatcgatgtactctatcaatttgaatgaaagaatatcgtttat 41288419  T
Q  214 ttttgt 219  Q
    ||||||    
T  41288420 ttttgt 41288425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 102 - 215
Target Start/End: Complemental strand, 42603548 - 42603435
Alignment:
Q  102 taacatagttattgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattg 201  Q
    |||||||| | ||||| ||||||||  || ||| ||| |||||||||||   | ||| |||||||||||||| |||||||| ||| ||||||||| | ||    
T  42603548 taacatagatgttgtgagtttgttcacagattcatccgttttgtttttagcgaatttgaatttatattgtatcgatgtactctatcaatttgaatgaatg 42603449  T
Q  202 aatatcgtttattt 215  Q
    || |||||||||||    
T  42603448 aacatcgtttattt 42603435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 136 - 219
Target Start/End: Complemental strand, 7765613 - 7765529
Alignment:
Q  136 tcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaattt-gaattattgaatatcgtttatttttgt 219  Q
    |||| ||| |||||| | ||||| ||||| |||||||| |||||||| ||| ||||| |||||| ||||||||||||||||||||    
T  7765613 tcctatttatttttagatactttgaatttgtattgtatcgatgtactctatcaattttgaattaatgaatatcgtttatttttgt 7765529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 156 - 216
Target Start/End: Original strand, 10574771 - 10574831
Alignment:
Q  156 tttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttt 216  Q
    |||| |||||||||||||||||||||| ||| ||||||||| | |||||||| ||||||||    
T  10574771 tttagatttatattgtattgatgtactctatcaatttgaatgaatgaatatcatttatttt 10574831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 136 - 212
Target Start/End: Complemental strand, 22747244 - 22747168
Alignment:
Q  136 tcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgttta 212  Q
    |||||||||||||||  || ||| |||||||||||||| |||||||| ||| ||||||||| | | |||||||||||    
T  22747244 tcctttttgtttttagtaaatttgaatttatattgtatcgatgtactctatcaatttgaatgaatcaatatcgttta 22747168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 114 - 218
Target Start/End: Original strand, 25112851 - 25112955
Alignment:
Q  114 tgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttat 213  Q
    |||| |||||||||||| ||| || ||||| ||||||   ||||| | |||||||||||| |||||||| ||| | ||||||| | ||| ||||||||||    
T  25112851 tgtgagtttgttcgtagattcatcttttttatttttagcgactttgattttatattgtatcgatgtactctatcattttgaatgaatgactatcgtttat 25112950  T
Q  214 ttttg 218  Q
    |||||    
T  25112951 ttttg 25112955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 21603868 - 21603927
Alignment:
Q  160 aatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    ||||| ||||||||||||||||| ||| ||||||||| | ||||||||||| ||||||||    
T  21603868 aatttgtattgtattgatgtactctatcaatttgaatgaatgaatatcgttaatttttgt 21603927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 136 - 219
Target Start/End: Original strand, 21991048 - 21991131
Alignment:
Q  136 tcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||||||||||||||   | |||  |||| |||||||| |||||||| ||| ||||||||| | ||||||||||||||||||||    
T  21991048 tcctttttgtttttagcgaatttggatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 21991131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 114 - 217
Target Start/End: Complemental strand, 36579098 - 36578995
Alignment:
Q  114 tgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttat 213  Q
    |||| ||||||||  || ||| |||||||||||||||   | ||| |||||||||| |||| ||||||| ||| ||||||||  | ||||||||||||||    
T  36579098 tgtgagtttgttcacagattcatcctttttgtttttagcgaatttgaatttatattatattaatgtactctatcaatttgaacgaatgaatatcgtttat 36578999  T
Q  214 tttt 217  Q
    ||||    
T  36578998 tttt 36578995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 11833428 - 11833485
Alignment:
Q  160 aatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttattttt 217  Q
    ||||| |||||||| |||||||| ||| ||||||||| | ||||||||||||||||||    
T  11833428 aatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttattttt 11833485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 219
Target Start/End: Complemental strand, 17473619 - 17473413
Alignment:
Q  17 tcaacgttgcaaattcagaaacatgaatattccagagactgaaatatagttaggtttgtcggcatatgtactatgtcattt----ctactaacatagtta 112  Q
    ||||||| ||| || |||| |||||| |||||| ||||| | |||||||| |  |||||  ||||||||||| || |||||    ||| |||||| | |     
T  17473619 tcaacgtcgcagatccagagacatgagtattccggagacaggaatatagtcatatttgtaagcatatgtactttgccattttatcctattaacatggatg 17473520  T
Q  113 ttgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgttta 212  Q
    ||||| ||||||||  || ||| |||||||||||||||   | |||| |||| |||||||  |||||||| ||| ||||||||  | |||||||| ||||    
T  17473519 ttgtgagtttgttcacagattcatcctttttgtttttagcgaatttagatttgtattgtaccgatgtactctatcaatttgaaagaatgaatatcattta 17473420  T
Q  213 tttttgt 219  Q
     ||||||    
T  17473419 cttttgt 17473413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 219
Target Start/End: Original strand, 17579595 - 17579801
Alignment:
Q  17 tcaacgttgcaaattcagaaacatgaatattccagagactgaaatatagttaggtttgtcggcatatgtactatgtcattt----ctactaacatagtta 112  Q
    ||||||| ||| || |||| |||||| |||||| ||||| | |||||||| |  |||||  ||||||||||| || |||||    ||| |||||| | |     
T  17579595 tcaacgtcgcagatccagagacatgagtattccggagacaggaatatagtcatatttgtaagcatatgtactttgccattttatcctattaacatggatg 17579694  T
Q  113 ttgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgttta 212  Q
    ||||| ||||||||  || ||| |||||||||||||||   | |||| |||| |||||||  |||||||| ||| ||||||||  | |||||||| ||||    
T  17579695 ttgtgagtttgttcacagattcatcctttttgtttttagcgaatttagatttgtattgtaccgatgtactctatcaatttgaaagaatgaatatcattta 17579794  T
Q  213 tttttgt 219  Q
     ||||||    
T  17579795 cttttgt 17579801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 167 - 219
Target Start/End: Complemental strand, 4621084 - 4621032
Alignment:
Q  167 attgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    ||||||| |||||||| ||| ||||||||| | ||||||||||||||||||||    
T  4621084 attgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 4621032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 114 - 214
Target Start/End: Original strand, 32643332 - 32643432
Alignment:
Q  114 tgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttat 213  Q
    |||| |||||||| ||| ||| |||||||||||||||   | |||  ||||||||||||| | |||||| ||| || |||||| | ||||||||||||||    
T  32643332 tgtgagtttgttcatagattcatcctttttgtttttaacgaatttggatttatattgtatcggtgtactctatcaacttgaatgaatgaatatcgtttat 32643431  T
Q  214 t 214  Q
    |    
T  32643432 t 32643432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 121 - 212
Target Start/End: Original strand, 20206157 - 20206248
Alignment:
Q  121 ttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgttta 212  Q
    ||||||| || ||| | ||||||||||||| | ||||| ||||| | |||||| |||||||| | | ||||||||| | |||||||||||||    
T  20206157 ttgttcgcagattcattctttttgtttttagatactttgaatttgtgttgtatcgatgtactctgtcaatttgaatgaatgaatatcgttta 20206248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 26017383 - 26017324
Alignment:
Q  160 aatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||||||||| ||| |||||||| ||| ||||||||| | |||||||| |||||||||||    
T  26017383 aatttatattatatcgatgtactctatcaatttgaatgaatgaatatcatttatttttgt 26017324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 34871205 - 34871146
Alignment:
Q  160 aatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||||||||||||| |||||||| ||| |||||| || | ||||||||||||| ||||||    
T  34871205 aatttatattgtatcgatgtactctatcaatttgtataaatgaatatcgtttacttttgt 34871146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 219
Target Start/End: Complemental strand, 39532710 - 39532627
Alignment:
Q  136 tcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||||||||||||||   | ||| ||||| |||||||| | |||||| ||| ||||||||| | | ||||||||||||||||||    
T  39532710 tcctttttgtttttagcgaatttgaatttgtattgtatcggtgtactctatcaatttgaatgaattaatatcgtttatttttgt 39532627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 182
Target Start/End: Original strand, 47296025 - 47296096
Alignment:
Q  111 tattgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtact 182  Q
    ||||||| ||||||||  || ||| || ||||||||||||  ||||||  ||||||||||||||||||||||    
T  47296025 tattgtgagtttgttcccagattcatcttttttgtttttagcaactttttatttatattgtattgatgtact 47296096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 119 - 217
Target Start/End: Complemental strand, 1280889 - 1280791
Alignment:
Q  119 gtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttattttt 217  Q
    ||||||||  || ||| |||||||||||||||   | |||  |||| |||| ||| |||||||| ||| ||||||||| | ||||||||||||||||||    
T  1280889 gtttgttcacagattcatcctttttgtttttagcgaatttggatttgtattatatcgatgtactctatcaatttgaataaatgaatatcgtttattttt 1280791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 9785728 - 9785786
Alignment:
Q  161 atttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||| |||||||| |||||||  ||| ||||||||| | ||||||||||||||||||||    
T  9785728 atttgtattgtatcgatgtaccctatcaatttgaatgaatgaatatcgtttatttttgt 9785786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 139 - 217
Target Start/End: Complemental strand, 24319955 - 24319877
Alignment:
Q  139 tttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttattttt 217  Q
    ||||||||||||   | |||| |||| |||||||| |||||||| ||| ||||| ||| | ||||||||||||||||||    
T  24319955 tttttgtttttagcgaatttagatttgtattgtatcgatgtactctatcaatttaaatgaatgaatatcgtttattttt 24319877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 216
Target Start/End: Original strand, 31725009 - 31725071
Alignment:
Q  154 actttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttt 216  Q
    ||||||||||| |||||||| |||| ||||| | ||||||||| | | |||||||||||||||    
T  31725009 actttaaatttgtattgtatcgatgcactttttcaatttgaatgaataaatatcgtttatttt 31725071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 38277208 - 38277266
Alignment:
Q  161 atttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||||||| ||||  ||||||| ||| ||||||||| | ||||||||||||||||||||    
T  38277208 atttatatcgtatcaatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 38277266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 119 - 219
Target Start/End: Original strand, 9137760 - 9137861
Alignment:
Q  119 gtttgttcgtagtttcttcctttttgtttttaca-aactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttattttt 217  Q
    ||||||||| || ||| ||||||||  ||||| | ||||||| |||| ||||  ||||||||||| ||| ||||||||| | | |||||| |||||||||    
T  9137760 gtttgttcgcagattcatccttttttgttttaaacaactttagatttttattaaattgatgtactctatcaatttgaatgaataaatatcttttattttt 9137859  T
Q  218 gt 219  Q
    ||    
T  9137860 gt 9137861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 217
Target Start/End: Original strand, 10624172 - 10624249
Alignment:
Q  140 ttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttattttt 217  Q
    |||||||||||  |||||| ||||| | |||||| ||||||| | || ||||| ||| | ||||||||||||||||||    
T  10624172 ttttgtttttaacaacttttaatttgtcttgtatcgatgtacataatcaatttaaatgaatgaatatcgtttattttt 10624249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 217
Target Start/End: Complemental strand, 14657656 - 14657575
Alignment:
Q  136 tcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttattttt 217  Q
    |||||||||||||||   | ||| || || ||||||||  |||||||| || ||||||||||| |||||||| |||||||||    
T  14657656 tcctttttgtttttagcgaatttgaaattgtattgtatcaatgtacttaatcaatttgaattaatgaatatcttttattttt 14657575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 166 - 219
Target Start/End: Original strand, 39707684 - 39707737
Alignment:
Q  166 tattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    ||||||||||||  ||| ||| ||||||||| | ||||||||||||||||||||    
T  39707684 tattgtattgatccactctatcaatttgaatgaatgaatatcgtttatttttgt 39707737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 219
Target Start/End: Complemental strand, 48643527 - 48643478
Alignment:
Q  170 gtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||| |||||||| ||| ||||||||| | ||||||||||||||||||||    
T  48643527 gtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 48643478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 113 - 209
Target Start/End: Original strand, 42645018 - 42645114
Alignment:
Q  113 ttgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgt 209  Q
    ||||| ||||||||  || ||| |||||||||||||||   | |||| | || |||||||| |||||||| ||| ||||||||| | ||||||||||    
T  42645018 ttgtgagtttgttcacagattcatcctttttgtttttagcgaatttagacttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgt 42645114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 3e-18; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 113 - 216
Target Start/End: Original strand, 27241418 - 27241521
Alignment:
Q  113 ttgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgttta 212  Q
    ||||| ||||||||| || ||| |||||||||||||||   | |||| |||| |||||||| |||||||| ||||||||||||||| ||||||| |||||    
T  27241418 ttgtgagtttgttcgcagattcatcctttttgtttttagcgaatttagatttctattgtatcgatgtactctatgaatttgaattaatgaatatagttta 27241517  T
Q  213 tttt 216  Q
    ||||    
T  27241518 tttt 27241521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 113 - 219
Target Start/End: Complemental strand, 42505169 - 42505065
Alignment:
Q  113 ttgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgttta 212  Q
    ||||| ||||||||| || ||| ||||||||||||||| | |||   ||||| ||||||||||||||||| ||| ||||||||| | |||||||||||||    
T  42505169 ttgtgagtttgttcgcagattcatcctttttgtttttagagactg--aatttgtattgtattgatgtactctatcaatttgaatgaatgaatatcgttta 42505072  T
Q  213 tttttgt 219  Q
    |||||||    
T  42505071 tttttgt 42505065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 11734614 - 11734497
Alignment:
Q  102 taacatagttattgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattg 201  Q
    |||||| ||| ||||| ||||||||  |  ||| |||||||||||||||   | ||| ||||| |||||||| |||||||||||| ||||||||| | ||    
T  11734614 taacatggttgttgtgagtttgttcacatattcatcctttttgtttttagcgaatttgaatttgtattgtatcgatgtactttatcaatttgaatgaatg 11734515  T
Q  202 aatatcgtttatttttgt 219  Q
    ||||||||||||||||||    
T  11734514 aatatcgtttatttttgt 11734497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 114 - 219
Target Start/End: Original strand, 6635612 - 6635717
Alignment:
Q  114 tgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttat 213  Q
    |||| ||||||||  || ||| |||||||||||||||   | ||| |||||||||||||| |||||||| ||| ||||||||| | |||| |||||||||    
T  6635612 tgtgagtttgttcacagattcatcctttttgtttttaacgaatttgaatttatattgtatcgatgtactctatcaatttgaatgaatgaaaatcgtttat 6635711  T
Q  214 ttttgt 219  Q
    ||||||    
T  6635712 ttttgt 6635717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 113 - 219
Target Start/End: Original strand, 32309859 - 32309965
Alignment:
Q  113 ttgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgttta 212  Q
    ||||| ||||||||| || ||| || ||||| ||||||   ||||| |||||||||| ||| |||||||| ||| ||||||||| | | |||||||||||    
T  32309859 ttgtgagtttgttcgcagattcatcttttttatttttaacgactttgaatttatattatatcgatgtactctatcaatttgaatgaatcaatatcgttta 32309958  T
Q  213 tttttgt 219  Q
    |||||||    
T  32309959 tttttgt 32309965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 39179555 - 39179497
Alignment:
Q  161 atttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||| |||||||| |||||||||||| ||||||||| | ||||||||||||||||||||    
T  39179555 atttgtattgtatcgatgtactttatcaatttgaatgaatgaatatcgtttatttttgt 39179497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 114 - 219
Target Start/End: Complemental strand, 17095998 - 17095893
Alignment:
Q  114 tgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttat 213  Q
    |||| ||||||||  || ||| |||||||||||||||   | ||| ||||| |||||||| |||||||| ||| ||||||||| | ||||| ||||||||    
T  17095998 tgtgagtttgttcacagattcatcctttttgtttttagcgaatttgaatttgtattgtatcgatgtactctatcaatttgaatgaatgaatgtcgtttat 17095899  T
Q  214 ttttgt 219  Q
    ||||||    
T  17095898 ttttgt 17095893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 114 - 219
Target Start/End: Original strand, 17331692 - 17331797
Alignment:
Q  114 tgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttat 213  Q
    |||| ||||||||  || ||| |||||||||||||||   | |||  |||| |||||||| |||||||| ||| ||||||||| | ||||||||||||||    
T  17331692 tgtgagtttgttcacagattcatcctttttgtttttagcgaatttggatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttat 17331791  T
Q  214 ttttgt 219  Q
    ||||||    
T  17331792 ttttgt 17331797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 154 - 219
Target Start/End: Complemental strand, 19200313 - 19200248
Alignment:
Q  154 actttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||||| |||||| |||||| |||||||||||| ||||||||| | ||||||| ||||||||||||    
T  19200313 actttagatttatgttgtatcgatgtactttattaatttgaatgaatgaatattgtttatttttgt 19200248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 119 - 219
Target Start/End: Complemental strand, 6681629 - 6681529
Alignment:
Q  119 gtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttg 218  Q
    ||||||||  || ||| |||||||||||||||  || |||  |||| |||||||| |||||||| ||| |||| |||| | |||||||||||||||||||    
T  6681629 gtttgttcacagattcatcctttttgtttttagcaaatttggatttgtattgtatcgatgtactctatcaattagaatgaatgaatatcgtttatttttg 6681530  T
Q  219 t 219  Q
    |    
T  6681529 t 6681529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 136 - 219
Target Start/End: Complemental strand, 7771556 - 7771473
Alignment:
Q  136 tcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||||||||||||||   | |||| |||| |||||||| |||||||| ||| ||||||||| | | ||||||||||||||||||    
T  7771556 tcctttttgtttttagcgaatttagatttgtattgtatcgatgtactatatcaatttgaatgaataaatatcgtttatttttgt 7771473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 156 - 219
Target Start/End: Complemental strand, 9196746 - 9196683
Alignment:
Q  156 tttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||||||||||||| |||  ||||||| ||| ||||||||| | ||||||||||||||||||||    
T  9196746 tttaaatttatattatatcaatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 9196683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 136 - 219
Target Start/End: Original strand, 34431450 - 34431533
Alignment:
Q  136 tcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||||||||||||||   | |||  |||| |||||||| |||||||| ||| ||||||||| | ||||||||||||||||||||    
T  34431450 tcctttttgtttttagcgaatttggatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 34431533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 219
Target Start/End: Original strand, 20483549 - 20483655
Alignment:
Q  113 ttgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgttta 212  Q
    ||||| ||||||||  || ||| |||||||||||||||   | |||  |||| |||| ||| |||||||| ||| ||||||||| | |||||||||||||    
T  20483549 ttgtgagtttgttcacagattcatcctttttgtttttagcgaatttggatttgtattatatcgatgtactctattaatttgaatgaatgaatatcgttta 20483648  T
Q  213 tttttgt 219  Q
    |||||||    
T  20483649 tttttgt 20483655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 23881826 - 23881768
Alignment:
Q  161 atttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||| |||||||| |||||||| ||| ||||||||| | ||||||||||||||||||||    
T  23881826 atttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 23881768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 219
Target Start/End: Complemental strand, 39531114 - 39531060
Alignment:
Q  165 atattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    ||||||||| |||||||| ||| ||||||||| | ||||||||||||||||||||    
T  39531114 atattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 39531060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 216
Target Start/End: Original strand, 3740694 - 3740798
Alignment:
Q  113 ttgtgggtttgttcgtagtttc-ttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgttt 211  Q
    ||||| |||||||| ||| ||| ||||||||||||||||   | ||| |||||  |||||||  ||||||| ||| ||||||||| | ||||||||||||    
T  3740694 ttgtgagtttgttcatagattcattcctttttgtttttagcgaatttgaatttggattgtatcaatgtactctatcaatttgaatgaatgaatatcgttt 3740793  T
Q  212 atttt 216  Q
    |||||    
T  3740794 atttt 3740798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 217
Target Start/End: Original strand, 6281408 - 6281511
Alignment:
Q  114 tgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttat 213  Q
    |||| ||||||||  || ||| |||||||||||||||   | ||| ||||| |||||||| ||| |||| ||| ||||||||| | |||||||||||||     
T  6281408 tgtgagtttgttcacagattcatcctttttgtttttagcgaatttgaatttgtattgtatcgatatactctatcaatttgaatgaatgaatatcgtttac 6281507  T
Q  214 tttt 217  Q
    ||||    
T  6281508 tttt 6281511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 219
Target Start/End: Original strand, 26293996 - 26294079
Alignment:
Q  136 tcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||||||||||||||   | ||| ||||| |||||||| || ||||| |||  |||||||| | ||||||||||||||||||||    
T  26293996 tcctttttgtttttagcgaatttgaatttgtattgtatcgacgtactctatctatttgaatgaatgaatatcgtttatttttgt 26294079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 29154609 - 29154668
Alignment:
Q  160 aatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    ||||||||||||||| || |||| ||| ||||||||| | |||||||| |||||||||||    
T  29154609 aatttatattgtattaatatactctatcaatttgaataaatgaatatcatttatttttgt 29154668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 33164200 - 33164121
Alignment:
Q  140 ttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||||||||||  || ||| ||||| |||| ||| |||||||| | | ||||||||| | ||||||||||||||||||||    
T  33164200 ttttgtttttagcaaatttgaatttgtattatatcgatgtactctgtcaatttgaatgaatgaatatcgtttatttttgt 33164121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 219
Target Start/End: Original strand, 42781387 - 42781470
Alignment:
Q  136 tcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||||||| ||||||   ||||| ||||| |||||||| |||| ||| ||| ||||||||| | | ||||||||||||||||||    
T  42781387 tcctttttatttttagcgactttgaatttgtattgtatcgatgcactctatcaatttgaataaataaatatcgtttatttttgt 42781470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 219
Target Start/End: Original strand, 17699916 - 17700022
Alignment:
Q  113 ttgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgttta 212  Q
    ||||| ||||||||  || ||| |||||||||||||||   | |||  |||| | |||||| |||||||| ||| ||||||| | | |||||||||||||    
T  17699916 ttgtgagtttgttcacagattcatcctttttgtttttagcgaatttggatttgttttgtatcgatgtactctatcaatttgattcaatgaatatcgttta 17700015  T
Q  213 tttttgt 219  Q
    |||||||    
T  17700016 tttttgt 17700022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 17732097 - 17732039
Alignment:
Q  161 atttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||| |||||||| |||||||| ||| ||||||||| | |||||||| |||||||||||    
T  17732097 atttgtattgtatcgatgtactctatcaatttgaatgagtgaatatcatttatttttgt 17732039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 219
Target Start/End: Original strand, 42609583 - 42609625
Alignment:
Q  177 tgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||||||||| ||||||||| | ||||||||||||||||||||    
T  42609583 tgtactttattaatttgaatgaatgaatatcgtttatttttgt 42609625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 114 - 219
Target Start/End: Complemental strand, 26294831 - 26294726
Alignment:
Q  114 tgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttat 213  Q
    |||| ||||||||  || ||| || ||||||||||||   | |||| |||| |||||||| ||| |||| ||| ||||||||| | |||||| |||||||    
T  26294831 tgtgagtttgttcacagattcatcatttttgtttttagcgaatttagatttgtattgtatcgatatactctatcaatttgaatgaatgaataccgtttat 26294732  T
Q  214 ttttgt 219  Q
    ||||||    
T  26294731 ttttgt 26294726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 119 - 219
Target Start/End: Original strand, 7151165 - 7151265
Alignment:
Q  119 gtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttg 218  Q
    |||||||||| | ||| || ||||||||||||   ||||| ||||| ||||||||  || |||| |||  |||| ||| | |||||||||||||||||||    
T  7151165 gtttgttcgtggattcatcttttttgtttttaacgactttgaatttgtattgtatcaatttactctatcgattttaatgaatgaatatcgtttatttttg 7151264  T
Q  219 t 219  Q
    |    
T  7151265 t 7151265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 167 - 219
Target Start/End: Original strand, 34866828 - 34866880
Alignment:
Q  167 attgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||||||||||| ||| ||| ||||||||| | |||||||| |||||||||||    
T  34866828 attgtattgatgcactatatcaatttgaatgaatgaatatcatttatttttgt 34866880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 167 - 219
Target Start/End: Original strand, 40775157 - 40775209
Alignment:
Q  167 attgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    ||||||| |||||||| ||| ||||||||| | |||||||| |||||||||||    
T  40775157 attgtatcgatgtactctatcaatttgaatgaatgaatatcatttatttttgt 40775209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 154 - 214
Target Start/End: Original strand, 43415609 - 43415669
Alignment:
Q  154 actttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatt 214  Q
    |||||||||||||||| ||||||| ||||||||  ||||||||   |||||||| ||||||    
T  43415609 actttaaatttatattatattgatatactttatcgatttgaatagatgaatatcatttatt 43415669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 1e-17; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 113 - 219
Target Start/End: Complemental strand, 14600464 - 14600358
Alignment:
Q  113 ttgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgttta 212  Q
    ||||| |||||||| ||| ||| |||||||||||||||   | ||||||||| |||||||| |||||||| ||| ||||||||| | | |||||||||||    
T  14600464 ttgtgagtttgttcatagattcatcctttttgtttttagcgaatttaaatttgtattgtatcgatgtactctattaatttgaatgaataaatatcgttta 14600365  T
Q  213 tttttgt 219  Q
    |||||||    
T  14600364 tttttgt 14600358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 113 - 219
Target Start/End: Complemental strand, 7579621 - 7579515
Alignment:
Q  113 ttgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgttta 212  Q
    ||||| ||||||||  |||||| |||||||||||| ||  || |||  ||||||||||||| |||||||| ||| ||||||||| | |||||||| ||||    
T  7579621 ttgtgagtttgttcacagtttcatcctttttgtttctagcaaatttggatttatattgtatcgatgtactctatcaatttgaatgaatgaatatcattta 7579522  T
Q  213 tttttgt 219  Q
     ||||||    
T  7579521 gttttgt 7579515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 113 - 219
Target Start/End: Original strand, 24700198 - 24700303
Alignment:
Q  113 ttgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgttta 212  Q
    ||||| |||||||| ||| ||| |||||||||||||||   | ||| |||||  ||||||| |||||||| ||||||||||||| | || ||||||||||    
T  24700198 ttgtgagtttgttcatagattcatcctttttgtttttagcgaatttgaatttgaattgtatcgatgtactctatgaatttgaatgaatg-atatcgttta 24700296  T
Q  213 tttttgt 219  Q
    |||||||    
T  24700297 tttttgt 24700303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 136 - 217
Target Start/End: Original strand, 7281938 - 7282019
Alignment:
Q  136 tcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttattttt 217  Q
    ||||||||||||||| | |||||||||||||||| ||| ||| |||| ||| ||||  ||| | ||||||||||||||||||    
T  7281938 tcctttttgtttttagagactttaaatttatattatatcgatatactctataaattaaaatgaatgaatatcgtttattttt 7282019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 114 - 219
Target Start/End: Original strand, 37613000 - 37613105
Alignment:
Q  114 tgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttat 213  Q
    |||| ||||||||  || ||| |||||||||||||||   | ||| ||||| |||||||| ||| |||| ||| ||||||||| | ||||||||||||||    
T  37613000 tgtgagtttgttcacagattcatcctttttgtttttaacgaatttgaatttgtattgtatcgatatactctatcaatttgaatgaatgaatatcgtttat 37613099  T
Q  214 ttttgt 219  Q
    ||||||    
T  37613100 ttttgt 37613105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 41362143 - 41362200
Alignment:
Q  160 aatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttattttt 217  Q
    ||||| ||||||||||||||||| ||| ||||||||| | ||||||||||||||||||    
T  41362143 aatttgtattgtattgatgtactctatcaatttgaatgaatgaatatcgtttattttt 41362200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 139 - 219
Target Start/End: Complemental strand, 13570507 - 13570427
Alignment:
Q  139 tttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    ||||||||||||  || ||||||||| |||||||| ||| |||| ||| ||||| ||| | ||||||||||||||||||||    
T  13570507 tttttgtttttaacaaatttaaatttgtattgtatcgatatactctatcaatttaaatgaatgaatatcgtttatttttgt 13570427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 136 - 219
Target Start/End: Complemental strand, 2234213 - 2234130
Alignment:
Q  136 tcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||||||||||||||   | ||| ||||| |||| ||| |||||||| ||| ||||||||| | ||||||||||||||||||||    
T  2234213 tcctttttgtttttagcgaatttgaatttgtattatatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 2234130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 26912038 - 26912097
Alignment:
Q  161 atttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgtt 220  Q
    ||||||||||||||| |||||||||| ||||| ||  | |||||||||||||||||||||    
T  26912038 atttatattgtattgttgtactttatcaatttaaaagaatgaatatcgtttatttttgtt 26912097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 219
Target Start/End: Complemental strand, 10952062 - 10951957
Alignment:
Q  113 ttgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgttta 212  Q
    ||||| ||||||| | || ||| || ||||||||||||   ||||||| ||||| || |||||||||||||||| ||||||||| | |||||||  ||||    
T  10952062 ttgtgagtttgtttgcagattcatcatttttgtttttaacgactttaa-tttattttatattgatgtactttatcaatttgaataaatgaatataattta 10951964  T
Q  213 tttttgt 219  Q
    |||||||    
T  10951963 tttttgt 10951957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 219
Target Start/End: Complemental strand, 10960067 - 10959962
Alignment:
Q  113 ttgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgttta 212  Q
    ||||| ||||||| | || ||| || ||||||||||||   ||||||| ||||| || |||||||||||||||| ||||||||| | |||||||  ||||    
T  10960067 ttgtgagtttgtttgcagattcatcatttttgtttttaacgactttaa-tttattttatattgatgtactttatcaatttgaataaatgaatataattta 10959969  T
Q  213 tttttgt 219  Q
    |||||||    
T  10959968 tttttgt 10959962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 24790888 - 24790830
Alignment:
Q  161 atttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||| |||||||| |||||||| ||| ||||||||| | ||||||||||||||||||||    
T  24790888 atttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 24790830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 38545535 - 38545478
Alignment:
Q  160 aatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttattttt 217  Q
    |||||||||||||| ||| |||| ||| ||||||||| | ||||||||||||||||||    
T  38545535 aatttatattgtatcgatatactctatcaatttgaatgaatgaatatcgtttattttt 38545478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 156 - 220
Target Start/End: Original strand, 4021156 - 4021220
Alignment:
Q  156 tttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgtt 220  Q
    |||||||||||||||||| ||||||| | || ||||||||| | |||||||  ||||||||||||    
T  4021156 tttaaatttatattgtatcgatgtacataatcaatttgaatgaatgaatataatttatttttgtt 4021220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 5526215 - 5526271
Alignment:
Q  163 ttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    ||||||||||| |||||||| ||| ||||||||| | | ||||||||||||||||||    
T  5526215 ttatattgtatcgatgtactctatcaatttgaatgaataaatatcgtttatttttgt 5526271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 167 - 219
Target Start/End: Original strand, 23767135 - 23767187
Alignment:
Q  167 attgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||||||||||||||| ||| ||||||||| | ||||||| ||||||||||||    
T  23767135 attgtattgatgtactctattaatttgaatgaatgaatattgtttatttttgt 23767187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 166 - 217
Target Start/End: Original strand, 2968931 - 2968982
Alignment:
Q  166 tattgtattgatgtactttatgaatttgaattattgaatatcgtttattttt 217  Q
    |||||||| |||||||| ||| ||||||||| | ||||||||||||||||||    
T  2968931 tattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttattttt 2968982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 5457460 - 5457519
Alignment:
Q  160 aatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||||||||| ||| |||||||| ||| ||||||||| | |||||||| |||||||||||    
T  5457460 aatttatattatatcgatgtactctatcaatttgaatgaatgaatatcatttatttttgt 5457519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 9501978 - 9502037
Alignment:
Q  160 aatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    ||||| |||||||| |||||||| ||| ||||||||| | ||||||||||||| ||||||    
T  9501978 aatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttacttttgt 9502037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 1809951 - 1809901
Alignment:
Q  166 tattgtattgatgtactttatgaatttgaattattgaatatcgtttatttt 216  Q
    |||||||| |||||||| ||| ||||||||| | |||||||||||||||||    
T  1809951 tattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttt 1809901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 9799729 - 9799679
Alignment:
Q  167 attgtattgatgtactttatgaatttgaattattgaatatcgtttattttt 217  Q
    |||||||||||||||| ||| ||||||||| | |||||||| |||||||||    
T  9799729 attgtattgatgtactctatcaatttgaatgaatgaatatcatttattttt 9799679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 196
Target Start/End: Complemental strand, 10338697 - 10338514
Alignment:
Q  17 tcaacgttgcaaattcagaaacatgaatattccagagactgaaatatagttaggtttgtcggcatatgtactatgtcattt----ctactaacatagtta 112  Q
    ||||||||||| || | || |||||| |||||| |||||  ||||||||| |  ||||| |||||| ||||| || | |||    ||| |||||| | |     
T  10338697 tcaacgttgcagatccggagacatgagtattccggagacaaaaatatagtcatatttgtaggcataggtactttgccgttttatgctattaacatggatg 10338598  T
Q  113 ttgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaat 196  Q
    ||||| ||||||||  |  ||| |||||||||||||||  || ||| ||||| ||||| ||||||||||| ||| |||||||||    
T  10338597 ttgtgagtttgttcacatattcatcctttttgtttttagcaaatttgaatttctattgcattgatgtactctattaatttgaat 10338514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 31202859 - 31202917
Alignment:
Q  161 atttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||| |||| ||| |||||||| ||| ||||||||| | ||||||||||||||||||||    
T  31202859 atttgtattatatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 31202917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 219
Target Start/End: Complemental strand, 43936946 - 43936840
Alignment:
Q  113 ttgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgttta 212  Q
    ||||| ||||||||  || ||| |||||||||||||||   | ||| ||||| |||||||| ||| |||| ||| |||| |||| | | |||||||||||    
T  43936946 ttgtgagtttgttcacagattcatcctttttgtttttagtgaatttgaatttgtattgtatcgatctactctatcaattcgaatgaataaatatcgttta 43936847  T
Q  213 tttttgt 219  Q
    |||||||    
T  43936846 tttttgt 43936840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 217
Target Start/End: Original strand, 4757534 - 4757615
Alignment:
Q  136 tcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttattttt 217  Q
    |||||||||||||||   | |||| |||| ||||||||  ||||||| ||| ||||||||| | ||||||||||||| ||||    
T  4757534 tcctttttgtttttagcgaatttagatttgtattgtatcaatgtactctatcaatttgaatgaatgaatatcgtttagtttt 4757615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 197
Target Start/End: Complemental strand, 7763508 - 7763431
Alignment:
Q  120 tttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaatt 197  Q
    ||||||||||| ||| || ||| ||||||||   ||||||||||| |||||||| |||||| ||||| ||||| ||||    
T  7763508 tttgttcgtagattcatcttttctgtttttattgactttaaatttgtattgtatcgatgtagtttatcaatttaaatt 7763431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 113 - 217
Target Start/End: Complemental strand, 13575975 - 13575871
Alignment:
Q  113 ttgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgttta 212  Q
    ||||| ||||||||| |  ||| |||||||||||||||   |||||  || | |||||||| |||||||| ||| ||||| ||| | |||||||||| ||    
T  13575975 ttgtgagtttgttcgcaaattcatcctttttgtttttagcgactttggatatgtattgtatcgatgtactctatcaatttaaatgaatgaatatcgtcta 13575876  T
Q  213 ttttt 217  Q
    |||||    
T  13575875 ttttt 13575871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 138 - 219
Target Start/End: Original strand, 24210628 - 24210705
Alignment:
Q  138 ctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||||||||||||  || ||| ||||| |||||||| |||||||| ||| ||||||||    ||||||| ||||||||||||    
T  24210628 ctttttgtttttagcaaatttgaatttttattgtatcgatgtactctatcaatttgaa----tgaatattgtttatttttgt 24210705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 1e-17; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 113 - 219
Target Start/End: Complemental strand, 40039081 - 40038975
Alignment:
Q  113 ttgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgttta 212  Q
    ||||| |||||||||||| ||| || ||||||||||||   ||||| ||||| |||||||| |||||||||||| ||| ||||| | || ||||||||||    
T  40039081 ttgtgagtttgttcgtagattcatcatttttgtttttaatgactttgaatttttattgtatcgatgtactttatcaatatgaatgaatggatatcgttta 40038982  T
Q  213 tttttgt 219  Q
    |||||||    
T  40038981 tttttgt 40038975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 136 - 220
Target Start/End: Original strand, 33012434 - 33012518
Alignment:
Q  136 tcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgtt 220  Q
    |||||||||||||||   | ||||||||| |||||||| |||||||| ||| ||||||||| | |||||||||||||||||||||    
T  33012434 tcctttttgtttttagcgaatttaaatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgtt 33012518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 113 - 219
Target Start/End: Original strand, 4732424 - 4732531
Alignment:
Q  113 ttgtgggtttgttcgtagtttcttcctttttgttttta-caaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgttt 211  Q
    ||||| ||||||||  || ||| ||||||||||||||| | || |||  |||| ||||||||||||||||| ||| ||||||||||| ||||||||||||    
T  4732424 ttgtgagtttgttcacagattcatcctttttgtttttagcgaattttggatttgtattgtattgatgtactctatcaatttgaattaatgaatatcgttt 4732523  T
Q  212 atttttgt 219  Q
    ||| ||||    
T  4732524 attattgt 4732531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 132 - 219
Target Start/End: Original strand, 29543175 - 29543262
Alignment:
Q  132 ttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    ||||| |||||||||||||  || ||| ||||| |||||||| |||||||| ||| ||||||||| | ||||||||||||||||||||    
T  29543175 ttctttctttttgtttttagcaaatttgaatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 29543262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 113 - 219
Target Start/End: Complemental strand, 12890875 - 12890769
Alignment:
Q  113 ttgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgttta 212  Q
    ||||| ||||||||  || ||| |||||||||||||||   | |||  |||| |||||||| |||||||| ||| ||||||||||| |||||||||||||    
T  12890875 ttgtgagtttgttcacagattcatcctttttgtttttagcgaatttggatttgtattgtatcgatgtactctatcaatttgaattaatgaatatcgttta 12890776  T
Q  213 tttttgt 219  Q
    |||||||    
T  12890775 tttttgt 12890769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 119 - 219
Target Start/End: Complemental strand, 13548672 - 13548571
Alignment:
Q  119 gtttgttcgtagtttcttccttttt-gtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttattttt 217  Q
    |||||||||||| ||| |||||||| |||||||  || ||||||||  |||||||| |||||||| ||| ||||| ||| | ||||||||||||||||||    
T  13548672 gtttgttcgtagattcatccttttttgtttttagcaattttaaattcgtattgtatcgatgtactatatcaatttaaatgaatgaatatcgtttattttt 13548573  T
Q  218 gt 219  Q
    ||    
T  13548572 gt 13548571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 114 - 219
Target Start/End: Original strand, 43696232 - 43696337
Alignment:
Q  114 tgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttat 213  Q
    |||| |||||||| | | ||| || ||||||||||||   | |||| |||| ||||||||||||||||| ||| ||||||||| | ||||||||||||||    
T  43696232 tgtgagtttgttcatcgattcatcatttttgtttttagcgaatttagatttgtattgtattgatgtactctatcaatttgaatgaatgaatatcgtttat 43696331  T
Q  214 ttttgt 219  Q
    ||||||    
T  43696332 ttttgt 43696337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 154 - 213
Target Start/End: Original strand, 17792861 - 17792920
Alignment:
Q  154 actttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttat 213  Q
    ||||| ||||| |||||||| |||||||||||| ||||||||||| ||||||||||||||    
T  17792861 actttgaatttgtattgtatcgatgtactttatcaatttgaattaatgaatatcgtttat 17792920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 219
Target Start/End: Complemental strand, 38384201 - 38384118
Alignment:
Q  136 tcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||||||||||||||   | ||| ||||| |||||||| ||||| |||||| ||||||||| | ||||||||||||||||||||    
T  38384201 tcctttttgtttttagcgaatttgaatttgtattgtatcgatgtgctttatcaatttgaatgaatgaatatcgtttatttttgt 38384118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 113 - 219
Target Start/End: Complemental strand, 17267884 - 17267778
Alignment:
Q  113 ttgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgttta 212  Q
    ||||| |||||||| ||| ||| |||||||||||||||   | |||  |||| ||||||||  ||||||| ||| ||||||||| | |||||||||||||    
T  17267884 ttgtgagtttgttcatagattcatcctttttgtttttagtgaatttggatttgtattgtatcaatgtactctatcaatttgaataaatgaatatcgttta 17267785  T
Q  213 tttttgt 219  Q
    |||||||    
T  17267784 tttttgt 17267778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 113 - 219
Target Start/End: Complemental strand, 18089170 - 18089064
Alignment:
Q  113 ttgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgttta 212  Q
    ||||| ||||||||  || ||| |||||||||||||||   | |||  |||| |||||||| |||||||| ||| ||||||||| | |||||||||||||    
T  18089170 ttgtgagtttgttcacagattcatcctttttgtttttagcgaatttggatttgtattgtatcgatgtactatatcaatttgaatgaatgaatatcgttta 18089071  T
Q  213 tttttgt 219  Q
    |||||||    
T  18089070 tttttgt 18089064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 113 - 219
Target Start/End: Complemental strand, 20560891 - 20560785
Alignment:
Q  113 ttgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgttta 212  Q
    ||||| ||||||||  || ||| |||||||||||||||   | |||  |||| |||||||| |||||||| ||| ||||||||| | |||||||||||||    
T  20560891 ttgtgagtttgttcacagattcatcctttttgtttttagcgaatttggatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgttta 20560792  T
Q  213 tttttgt 219  Q
    |||||||    
T  20560791 tttttgt 20560785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 114 - 216
Target Start/End: Complemental strand, 31908574 - 31908472
Alignment:
Q  114 tgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttat 213  Q
    |||| ||||||||  || ||| |||||||| ||||||  || |||  |||| ||||||||||||||||| ||| ||||||||| | ||||||||||||||    
T  31908574 tgtgagtttgttcacagattcatcctttttatttttagcaaatttggatttctattgtattgatgtactctatcaatttgaatgaatgaatatcgtttat 31908475  T
Q  214 ttt 216  Q
    |||    
T  31908474 ttt 31908472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 114 - 219
Target Start/End: Complemental strand, 13878766 - 13878661
Alignment:
Q  114 tgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttat 213  Q
    |||| ||||||||  || ||| |||||||||||||||   | |||  |||| |||||||| |||||||| ||| ||||||||| | ||||||||||||||    
T  13878766 tgtgagtttgttcacagattcatcctttttgtttttagcgaattttgatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttat 13878667  T
Q  214 ttttgt 219  Q
    ||||||    
T  13878666 ttttgt 13878661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 114 - 219
Target Start/End: Complemental strand, 14018891 - 14018786
Alignment:
Q  114 tgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttat 213  Q
    |||| ||||||||  || ||| |||||||||||||||   | |||  |||| |||||||| |||||||| ||| ||||||||| | ||||||||||||||    
T  14018891 tgtgagtttgttcacagattcatcctttttgtttttagcgaattttgatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttat 14018792  T
Q  214 ttttgt 219  Q
    ||||||    
T  14018791 ttttgt 14018786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 114 - 219
Target Start/End: Original strand, 16136442 - 16136547
Alignment:
Q  114 tgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttat 213  Q
    |||| ||||||||  || ||| |||||||||||||||   | |||| |||| |||| ||| |||||||| ||| ||||||||| | ||||||||||||||    
T  16136442 tgtgagtttgttcacagattcatcctttttgtttttagcgaatttagatttgtattatatcgatgtactctatcaatttgaatgaatgaatatcgtttat 16136541  T
Q  214 ttttgt 219  Q
    ||||||    
T  16136542 ttttgt 16136547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 114 - 219
Target Start/End: Original strand, 25068205 - 25068310
Alignment:
Q  114 tgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttat 213  Q
    |||| ||||||||  || ||| |||||||||||||||   | |||  |||| |||||||| |||||||| ||| ||||||||| | ||||||||||||||    
T  25068205 tgtgagtttgttcacagattcatcctttttgtttttagcgaatttggatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttat 25068304  T
Q  214 ttttgt 219  Q
    ||||||    
T  25068305 ttttgt 25068310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 139 - 219
Target Start/End: Original strand, 36868397 - 36868477
Alignment:
Q  139 tttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    ||||||||||||   | |||||||||||||| ||| ||| |||| ||| ||||||||| | ||||||||||||||||||||    
T  36868397 tttttgtttttagcgaatttaaatttatattatatcgatatactctatcaatttgaatgaatgaatatcgtttatttttgt 36868477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 156 - 219
Target Start/End: Original strand, 3527392 - 3527455
Alignment:
Q  156 tttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||| |||| |||||||| |||||||| ||| ||||||||| | ||||||||||||||||||||    
T  3527392 tttagatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 3527455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 136 - 219
Target Start/End: Complemental strand, 13740389 - 13740306
Alignment:
Q  136 tcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||||||||||||||   | |||  |||| ||||||||||||||||||||| ||||||||| |  ||||||||||| |||||||    
T  13740389 tcctttttgtttttagcgaatttggatttgtattgtattgatgtactttatcaatttgaatgaaagaatatcgtttgtttttgt 13740306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 113 - 216
Target Start/End: Original strand, 44942649 - 44942752
Alignment:
Q  113 ttgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgttta 212  Q
    ||||| ||||||||  || ||| |||||||||||| ||   | |||| |||| |||||||| |||||||| ||| ||||||||| | |||||||||||||    
T  44942649 ttgtgagtttgttcacagattcatcctttttgtttatagcgaatttagatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgttta 44942748  T
Q  213 tttt 216  Q
    ||||    
T  44942749 tttt 44942752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 219
Target Start/End: Original strand, 4739692 - 4739798
Alignment:
Q  113 ttgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgttta 212  Q
    ||||| ||||||||  || ||| |||||||||||||||   | |||  |||| |||||||| |||||||| ||| ||||||||| | |||||||||||||    
T  4739692 ttgtgagtttgttcacagattcatcctttttgtttttagcgaatttggatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgttta 4739791  T
Q  213 tttttgt 219  Q
     ||||||    
T  4739792 cttttgt 4739798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 219
Target Start/End: Original strand, 27096052 - 27096158
Alignment:
Q  113 ttgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgttta 212  Q
    ||||| ||||||||  || ||| |||||||||||||||   | ||| ||||| ||||||||  |||||||  || ||||||||| | |||||||||||||    
T  27096052 ttgtgagtttgttcacagattcatcctttttgtttttagtgaatttgaatttgtattgtatctatgtactccatcaatttgaatgaatgaatatcgttta 27096151  T
Q  213 tttttgt 219  Q
    |||||||    
T  27096152 tttttgt 27096158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 35333916 - 35333974
Alignment:
Q  161 atttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||| |||||||| |||||||| ||| ||||||||| | ||||||||||||||||||||    
T  35333916 atttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 35333974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 139 - 215
Target Start/End: Complemental strand, 10286746 - 10286670
Alignment:
Q  139 tttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttattt 215  Q
    ||||||||||||  || |||  |||| ||||||||||||||||| ||| ||||||||| | | ||||||||||||||    
T  10286746 tttttgtttttagcaaatttggatttctattgtattgatgtactctatcaatttgaatgaataaatatcgtttattt 10286670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 167 - 219
Target Start/End: Complemental strand, 11550384 - 11550332
Alignment:
Q  167 attgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||||||||||||||| ||| ||||||||| | |||||||| |||||||||||    
T  11550384 attgtattgatgtactctatcaatttgaatgaatgaatatcatttatttttgt 11550332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 219
Target Start/End: Original strand, 27666536 - 27666635
Alignment:
Q  119 gtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttg 218  Q
    ||||||| ||||  || |||||||||||||||  || ||||||||| |||||||  |||||||| ||| ||||||||| | |||||||  ||||||||||    
T  27666536 gtttgtttgtagaatcatcctttttgtttttagtaattttaaatttgtattgtaacgatgtactctatcaatttgaatgaatgaatat-atttatttttg 27666634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 167 - 219
Target Start/End: Original strand, 37884049 - 37884101
Alignment:
Q  167 attgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||||||||||||||| ||| ||||||||| | ||||||||||||||| ||||    
T  37884049 attgtattgatgtactatatcaatttgaatgaatgaatatcgtttattattgt 37884101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 219
Target Start/End: Original strand, 4703517 - 4703600
Alignment:
Q  136 tcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    ||||||||||||||    ||||| ||||| |||||||| |||||||| | | |||||| || | ||||||||||||||||||||    
T  4703517 tcctttttgtttttggcgactttgaatttgtattgtatcgatgtactctgtcaatttggatgaatgaatatcgtttatttttgt 4703600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 15920263 - 15920322
Alignment:
Q  160 aatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    ||||| |||||||| |||||||| ||| ||||||||| | |||||||| |||||||||||    
T  15920263 aatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcatttatttttgt 15920322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 219
Target Start/End: Complemental strand, 28230832 - 28230749
Alignment:
Q  136 tcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||||||||||||||   | ||| ||||| |||||||| |||||||| ||  ||||||||| |  |||||||||||||||||||    
T  28230832 tcctttttgtttttagcgaatttgaatttgtattgtatcgatgtactctaacaatttgaatgaacgaatatcgtttatttttgt 28230749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 27665887 - 27666005
Alignment:
Q  102 taacatagttattgtgggtttgttcgtagt-ttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattatt 200  Q
    |||||||| | ||||| ||||||||| | | ||| || ||||||||||||  || ||||||||| ||||||||  ||||| | ||| |||| |||| | |    
T  27665887 taacatagatgttgtgagtttgttcgcaatattcatcatttttgtttttagcaattttaaatttgtattgtataaatgtattctatcaattagaatgaat 27665986  T
Q  201 gaatatcgtttatttttgt 219  Q
    |||||| ||||||||||||    
T  27665987 gaatattgtttatttttgt 27666005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 136 - 218
Target Start/End: Complemental strand, 28261640 - 28261558
Alignment:
Q  136 tcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttg 218  Q
    |||||||||||||||   | |||  |||| |||||||| |||||||| ||| ||||||||| | ||||||| |||||||||||    
T  28261640 tcctttttgtttttatcgaatttggatttgtattgtatcgatgtactctatcaatttgaatgaatgaatattgtttatttttg 28261558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 34416473 - 34416415
Alignment:
Q  161 atttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||| |||||||| |||||||| ||| |||| |||| | ||||||||||||||||||||    
T  34416473 atttgtattgtatcgatgtactctatcaattcgaatgaatgaatatcgtttatttttgt 34416415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 166 - 219
Target Start/End: Original strand, 32314841 - 32314894
Alignment:
Q  166 tattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||||||| |||||||||||| ||||||||| | ||||||||  ||||||||||    
T  32314841 tattgtatcgatgtactttatcaatttgaatgaatgaatatctattatttttgt 32314894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 169 - 217
Target Start/End: Complemental strand, 4426361 - 4426313
Alignment:
Q  169 tgtattgatgtactttatgaatttgaattattgaatatcgtttattttt 217  Q
    ||||| |||||||| ||||||||||||| | ||||| ||||||||||||    
T  4426361 tgtatcgatgtactctatgaatttgaatgaatgaatgtcgtttattttt 4426313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 136 - 216
Target Start/End: Original strand, 5754668 - 5754748
Alignment:
Q  136 tcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttt 216  Q
    |||||||||||||||   | ||| ||||| |||| ||| |||||| | ||| ||||||||| | |||||||||||||||||    
T  5754668 tcctttttgtttttagcgaatttgaatttgtattatatcgatgtattctatcaatttgaatgaatgaatatcgtttatttt 5754748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 175 - 219
Target Start/End: Original strand, 11931276 - 11931320
Alignment:
Q  175 gatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||||||||||| ||||||||| | |||||||| |||||||||||    
T  11931276 gatgtactttatcaatttgaatgaatgaatatcatttatttttgt 11931320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 154 - 218
Target Start/End: Complemental strand, 16379825 - 16379761
Alignment:
Q  154 actttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttg 218  Q
    ||||| |||| |||||||||||||||||| ||| ||||||| |   ||||||||| |||||||||    
T  16379825 actttgaattaatattgtattgatgtactctatcaatttgattgtatgaatatcggttatttttg 16379761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 159 - 215
Target Start/End: Complemental strand, 17304244 - 17304188
Alignment:
Q  159 aaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttattt 215  Q
    ||||||||||||||| ||| || | ||| ||||||||| | ||||||||||||||||    
T  17304244 aaatttatattgtatcgatatattatatcaatttgaataaatgaatatcgtttattt 17304188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 5e-17; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 120 - 217
Target Start/End: Complemental strand, 25032854 - 25032757
Alignment:
Q  120 tttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttattttt 217  Q
    |||||||| || ||| |||||||||||||||   ||||| ||||| |||||||| |||||||| ||| ||||||||| | ||||||||||||||||||    
T  25032854 tttgttcgcagattcatcctttttgtttttagcgactttgaatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttattttt 25032757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 113 - 219
Target Start/End: Complemental strand, 28677897 - 28677791
Alignment:
Q  113 ttgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgttta 212  Q
    ||||| ||||||||| || ||| |||||||||||||||   | |||  |||| |||||||| |||||||| ||| ||||||||| | |||||||||||||    
T  28677897 ttgtgagtttgttcgcagattcatcctttttgtttttagcgaatttggatttgtattgtatcgatgtactctatcaatttgaataaatgaatatcgttta 28677798  T
Q  213 tttttgt 219  Q
    |||||||    
T  28677797 tttttgt 28677791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 138 - 217
Target Start/End: Original strand, 12537907 - 12537986
Alignment:
Q  138 ctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttattttt 217  Q
    |||||||||||||  ||||||  |||||||||||||||||||||| ||| ||||||||| | | |||||| |||||||||    
T  12537907 ctttttgtttttagcaactttgcatttatattgtattgatgtactctatcaatttgaataaattaatatcatttattttt 12537986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 113 - 219
Target Start/End: Original strand, 10304926 - 10305032
Alignment:
Q  113 ttgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgttta 212  Q
    ||||| ||||||| | || ||| || ||||||||||||  || ||| |||||||||||||| |||||| | ||| ||||||||| | |||||||| ||||    
T  10304926 ttgtgagtttgtttgcagattcatcatttttgtttttatcaattttgaatttatattgtatcgatgtaatctatcaatttgaatgaatgaatatccttta 10305025  T
Q  213 tttttgt 219  Q
    |||||||    
T  10305026 tttttgt 10305032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 138 - 219
Target Start/End: Complemental strand, 15791009 - 15790928
Alignment:
Q  138 ctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||||||||||||   | ||| ||||| |||||||| |||||||||||| ||||||||| | |||||||| |||||||||||    
T  15791009 ctttttgtttttagcgaatttgaatttgtattgtatcgatgtactttatcaatttgaataaatgaatatcttttatttttgt 15790928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 140 - 217
Target Start/End: Original strand, 17347965 - 17348042
Alignment:
Q  140 ttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttattttt 217  Q
    ||||||||||| | | |||||||||||||| ||| |||||||| ||| ||||| ||| | ||||||||||||||||||    
T  17347965 ttttgtttttagagaatttaaatttatattatatcgatgtactctatcaatttaaatgagtgaatatcgtttattttt 17348042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 139 - 219
Target Start/End: Original strand, 32784468 - 32784548
Alignment:
Q  139 tttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    ||||||||||||   | ||| ||||| |||||||| |||||||| ||| ||||||||||| ||||||| ||||||||||||    
T  32784468 tttttgtttttagcgaatttgaatttgtattgtatcgatgtactctatcaatttgaattaatgaatatagtttatttttgt 32784548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 136 - 219
Target Start/End: Original strand, 29205654 - 29205737
Alignment:
Q  136 tcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||||||||||||||   | |||  |||| |||||||| |||||||| ||| ||||||||| | ||||||||||||||||||||    
T  29205654 tcctttttgtttttagcgaatttggatttttattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 29205737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 42491279 - 42491338
Alignment:
Q  160 aatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||||||||||||| |||||||| ||| ||||||||| | ||||||| ||||||||||||    
T  42491279 aatttatattgtatcgatgtactctatcaatttgaatgaatgaatattgtttatttttgt 42491338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 136 - 219
Target Start/End: Original strand, 44517534 - 44517617
Alignment:
Q  136 tcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||||||||||||||   | |||  |||| |||||||| |||||||| ||| ||||||||| | ||||||||||||||||||||    
T  44517534 tcctttttgtttttagtgaatttggatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 44517617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 4882087 - 4882029
Alignment:
Q  161 atttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||| |||||||| |||||||| ||| ||||||||| | ||||||||||||||||||||    
T  4882087 atttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 4882029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 219
Target Start/End: Original strand, 12871864 - 12872075
Alignment:
Q  12 catcatcaacgttgcaaattcagaaacatgaatattccagagactgaaatatagttaggtttgtcggcatatgtactatgtcattt----ctactaacat 107  Q
    |||| ||||||||||| || |||| |||||| |||||| ||||||  |||||||| |   |||| |||||||||||| |||| |||    ||| ||||||    
T  12871864 catcgtcaacgttgcagatccagagacatgagtattccggagacttgaatatagtcatacttgtaggcatatgtactttgtcgttttatgctaataacat 12871963  T
Q  108 agttattgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatc 207  Q
     | |  |||| |||||||| ||  | | |||||||||||||||   | | |  |||| ||||||||  ||||||| ||| ||||||||| | ||||||||    
T  12871964 ggatgctgtgagtttgttcataaatccatcctttttgtttttagcgaatatggatttgtattgtatcaatgtactctatcaatttgaatgaatgaatatc 12872063  T
Q  208 gtttatttttgt 219  Q
    ||||||||||||    
T  12872064 gtttatttttgt 12872075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 138 - 216
Target Start/End: Original strand, 32301710 - 32301788
Alignment:
Q  138 ctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttt 216  Q
    ||||||||||| |   ||||||||||| |||||||||||| |||| ||||||||||||  | ||||| |||||||||||    
T  32301710 ctttttgttttgagtgactttaaatttgtattgtattgatatactatatgaatttgaacgaatgaatgtcgtttatttt 32301788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 13152836 - 13152896
Alignment:
Q  161 atttatattgtattgat--gtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||||||||||||||||  ||||| ||| ||||||||| | ||||||||||||||||||||    
T  13152836 atttatattgtattgatatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 13152896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 3233182 - 3233238
Alignment:
Q  161 atttatattgtattgatgtactttatgaatttgaattattgaatatcgtttattttt 217  Q
    ||||||||||||| |||||| | ||| ||||||||| | ||||||||||||||||||    
T  3233182 atttatattgtatcgatgtaatctatcaatttgaatgaatgaatatcgtttattttt 3233238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 175 - 219
Target Start/End: Original strand, 26199984 - 26200028
Alignment:
Q  175 gatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||||||||||| ||||||||| | ||||||||||||||||||||    
T  26199984 gatgtactttatcaatttgaatgaatgaatatcgtttatttttgt 26200028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 22031827 - 22031768
Alignment:
Q  160 aatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    ||||| ||||||||||||||||| ||| ||||||||| | ||||||||  ||||||||||    
T  22031827 aatttgtattgtattgatgtactctatcaatttgaatgaatgaatatcaattatttttgt 22031768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 220
Target Start/End: Original strand, 43504200 - 43504267
Alignment:
Q  153 aactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgtt 220  Q
    ||||||||||||||||| ||||||| |||| ||| ||| | ||| | |||||||| ||||||||||||    
T  43504200 aactttaaatttatattatattgatatactctatcaatgtaaataaatgaatatcatttatttttgtt 43504267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 16141022 - 16141080
Alignment:
Q  161 atttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||| |||||||| |||||||| ||| |||||| || | ||||||||||||||||||||    
T  16141022 atttgtattgtatcgatgtactctatcaatttggatgaatgaatatcgtttatttttgt 16141080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 37822073 - 37822015
Alignment:
Q  161 atttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||| |||||||| |||||||| ||| ||||||| | | ||||||||||||||||||||    
T  37822073 atttgtattgtatcgatgtactctatcaatttgagtgaatgaatatcgtttatttttgt 37822015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 114 - 216
Target Start/End: Original strand, 45750842 - 45750944
Alignment:
Q  114 tgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttat 213  Q
    |||| |||||||| ||  ||| |||||||||||||||  || |||  |||| ||||||||||||||||| ||| ||||||||  |  ||||||| |||||    
T  45750842 tgtgagtttgttcataaattcatcctttttgtttttagcaaatttggatttttattgtattgatgtactctatcaatttgaacgaacgaatatcttttat 45750941  T
Q  214 ttt 216  Q
    |||    
T  45750942 ttt 45750944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 166 - 219
Target Start/End: Complemental strand, 16574803 - 16574750
Alignment:
Q  166 tattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    ||||||||| ||||| ||||| ||||||||| | |||||||| |||||||||||    
T  16574803 tattgtatttatgtattttatcaatttgaataaatgaatatcatttatttttgt 16574750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 114 - 219
Target Start/End: Original strand, 42276719 - 42276824
Alignment:
Q  114 tgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttat 213  Q
    |||| ||||||||  || ||| |||||||| ||||||  || ||| ||||| |||||||| |||||||| ||| ||||||||  | || |||| ||||||    
T  42276719 tgtgagtttgttcacagattcatcctttttatttttagcaaatttgaatttgtattgtatcgatgtactctatcaatttgaaagaatgcatattgtttat 42276818  T
Q  214 ttttgt 219  Q
    ||||||    
T  42276819 ttttgt 42276824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 159 - 219
Target Start/End: Original strand, 18344006 - 18344066
Alignment:
Q  159 aaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||||| |||||||| ||| |||| ||| ||||||||| | | ||||||||||||||||||    
T  18344006 aaatttgtattgtatcgatatactctatcaatttgaataaataaatatcgtttatttttgt 18344066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 138 - 219
Target Start/End: Original strand, 27535085 - 27535162
Alignment:
Q  138 ctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||||||||||||   | ||| ||||| |||||||| |||||||| ||| ||||||||    ||||||||||||||||||||    
T  27535085 ctttttgtttttagcgaatttgaatttgtattgtatcgatgtactctatcaatttgaa----tgaatatcgtttatttttgt 27535162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 33486746 - 33486690
Alignment:
Q  161 atttatattgtattgatgtactttatgaatttgaattattgaatatcgtttattttt 217  Q
    |||| |||||||| |||||||| ||| ||||||||| | |||||||||||| |||||    
T  33486746 atttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgttttttttt 33486690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 167 - 219
Target Start/End: Complemental strand, 34659359 - 34659307
Alignment:
Q  167 attgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    ||||||| |||||||| ||| ||||||||| | |||||||| |||||||||||    
T  34659359 attgtatcgatgtactctatcaatttgaatgaatgaatatcatttatttttgt 34659307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 167 - 219
Target Start/End: Original strand, 46589544 - 46589596
Alignment:
Q  167 attgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    ||||||| |||||||| ||| ||||||||| | |||||||| |||||||||||    
T  46589544 attgtatcgatgtactctatcaatttgaatgaatgaatatcatttatttttgt 46589596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 8e-16; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 136 - 219
Target Start/End: Original strand, 14585848 - 14585931
Alignment:
Q  136 tcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||||||||||||||   | ||| ||||| ||||||||||||||||| ||| ||||||||| | ||||||||||||||||||||    
T  14585848 tcctttttgtttttagcgaatttgaatttgtattgtattgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 14585931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 113 - 219
Target Start/End: Complemental strand, 13701768 - 13701662
Alignment:
Q  113 ttgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgttta 212  Q
    ||||| ||||||||  || ||| |||||||||||||||   | ||| ||||| |||||||| |||||||| ||| ||||||||| | |||||||||||||    
T  13701768 ttgtgagtttgttcaaagattcatcctttttgtttttagcgaatttgaatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgttta 13701669  T
Q  213 tttttgt 219  Q
    |||||||    
T  13701668 tttttgt 13701662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 98 - 215
Target Start/End: Original strand, 11225681 - 11225798
Alignment:
Q  98 ctactaacatagttattgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaatt 197  Q
    |||||||||||  | |||||  |||||||| |  ||| |||||||||||||||  |||||||||||| |||||||| ||| || | ||| |||||||||     
T  11225681 ctactaacataaatgttgtgattttgttcgcaaattcgtcctttttgtttttaacaactttaaatttctattgtatcgatatattatatcaatttgaatg 11225780  T
Q  198 attgaatatcgtttattt 215  Q
    | ||||||||||||||||    
T  11225781 aatgaatatcgtttattt 11225798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 122 - 219
Target Start/End: Complemental strand, 25111926 - 25111829
Alignment:
Q  122 tgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    ||||| ||| ||| |||||||| ||||||  |||||| |||||||||| ||| |||||||| ||| ||||||||| | |||||||| |||||||||||    
T  25111926 tgttcatagattcatcctttttctttttaataactttgaatttatattatatcgatgtactctattaatttgaatgaatgaatatcatttatttttgt 25111829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 114 - 219
Target Start/End: Original strand, 33637758 - 33637863
Alignment:
Q  114 tgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttat 213  Q
    |||| ||||||||  || ||| |||||||||||||||   | |||  |||| |||||||| |||||||||||| ||||||||| | ||||||||||||||    
T  33637758 tgtgagtttgttcacagattcatcctttttgtttttagcgaatttggatttgtattgtatcgatgtactttatcaatttgaatgaatgaatatcgtttat 33637857  T
Q  214 ttttgt 219  Q
    ||||||    
T  33637858 ttttgt 33637863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 219
Target Start/End: Complemental strand, 38379497 - 38379414
Alignment:
Q  136 tcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||||||||||||||  |||||| ||||| ||||||||  ||||||||||| ||||||||| | | |||||||||||| |||||    
T  38379497 tcctttttgtttttaacaactttgaatttgtattgtatcaatgtactttatcaatttgaataaataaatatcgtttatgtttgt 38379414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 114 - 217
Target Start/End: Original strand, 48401456 - 48401559
Alignment:
Q  114 tgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttat 213  Q
    |||| ||||||||  || ||| |||||||| ||||||   | ||| |||||||||||||| |||||||| ||| ||||||||| | ||||||||||||||    
T  48401456 tgtgagtttgttcacagattcatcctttttatttttagcgaatttgaatttatattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttat 48401555  T
Q  214 tttt 217  Q
    ||||    
T  48401556 tttt 48401559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 139 - 217
Target Start/End: Complemental strand, 31462495 - 31462417
Alignment:
Q  139 tttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttattttt 217  Q
    ||||||||||||   | ||||||||| |||||||| |||||||||||| ||||||||| | ||||||||||||| ||||    
T  31462495 tttttgtttttagcgaatttaaatttgtattgtatcgatgtactttatcaatttgaatgaatgaatatcgtttactttt 31462417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 49627822 - 49627764
Alignment:
Q  161 atttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    ||||||||||||| |||||||| ||| ||||||||| | ||||||||||||||||||||    
T  49627822 atttatattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 49627764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 139 - 217
Target Start/End: Complemental strand, 50981206 - 50981128
Alignment:
Q  139 tttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttattttt 217  Q
    ||||||||||||   ||||||||||| || | |||||||||||| ||| ||||||||| | ||||||||||||||||||    
T  50981206 tttttgtttttagcgactttaaatttgtactatattgatgtactctatcaatttgaatgaatgaatatcgtttattttt 50981128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 139 - 217
Target Start/End: Complemental strand, 51084340 - 51084262
Alignment:
Q  139 tttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttattttt 217  Q
    ||||||||||||   ||||||||||| || | |||||||||||| ||| ||||||||| | ||||||||||||||||||    
T  51084340 tttttgtttttagcgactttaaatttgtactatattgatgtactctatcaatttgaatgaatgaatatcgtttattttt 51084262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 167 - 219
Target Start/End: Original strand, 19645607 - 19645659
Alignment:
Q  167 attgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||||||||||||||| ||| ||||||||| | ||||||||||||||||||||    
T  19645607 attgtattgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 19645659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 140 - 216
Target Start/End: Complemental strand, 41598215 - 41598139
Alignment:
Q  140 ttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttt 216  Q
    |||||||||||  |||||| ||||| ||| ||||||||||||| ||| ||||| ||| | |||||||||||||||||    
T  41598215 ttttgtttttaataactttgaatttgtatcgtattgatgtactatatcaatttaaataaatgaatatcgtttatttt 41598139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 30156037 - 30155950
Alignment:
Q  132 ttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||||||||||||||||||   | |||  |||| |||||||| |||||||| ||| ||||||||| | ||| ||||||||||||||||    
T  30156037 ttcttcctttttgtttttagcgaatttggatttgtattgtatcgatgtactctatcaatttgaatgaatgagtatcgtttatttttgt 30155950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 136 - 219
Target Start/End: Complemental strand, 41868076 - 41867993
Alignment:
Q  136 tcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||||||||||||||   | ||| ||||| |||||||| |||||||| ||| ||||||||| | || |||||||||||||||||    
T  41868076 tcctttttgtttttagcgaatttgaatttgtattgtatcgatgtactctatcaatttgaatgaatgcatatcgtttatttttgt 41867993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 136 - 219
Target Start/End: Complemental strand, 55090442 - 55090359
Alignment:
Q  136 tcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||||||||||||||   | |||  |||| |||||||| |||||||| ||| ||||||||| | ||||||||||||||||||||    
T  55090442 tcctttttgtttttagcgaatttggatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 55090359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 154 - 216
Target Start/End: Complemental strand, 3961507 - 3961445
Alignment:
Q  154 actttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttt 216  Q
    ||||| ||||| |||||||| ||| |||||||| ||||||||| | |||||||||||||||||    
T  3961507 actttgaatttgtattgtatcgatatactttatcaatttgaataaatgaatatcgtttatttt 3961445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 11819495 - 11819553
Alignment:
Q  161 atttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||| |||||||| |||||||| ||| ||||||||| | ||||||||||||||||||||    
T  11819495 atttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 11819553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 219
Target Start/End: Original strand, 31270672 - 31270778
Alignment:
Q  113 ttgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgttta 212  Q
    ||||| ||||||||  || ||| |||||||||||||||   | ||| ||||| ||||||||||||||||| |||  |||||||| | | |||||||| ||    
T  31270672 ttgtgagtttgttcacagattcatcctttttgtttttagcgaatttgaatttgtattgtattgatgtactctatccatttgaatgaataaatatcgtata 31270771  T
Q  213 tttttgt 219  Q
    |||||||    
T  31270772 tttttgt 31270778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 136 - 217
Target Start/End: Original strand, 38530310 - 38530392
Alignment:
Q  136 tcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaat-tattgaatatcgtttattttt 217  Q
    ||||||||||||||| ||| |||   ||| |||||||| |||||||| ||| |||||||||  ||||||||||||||||||||    
T  38530310 tcctttttgtttttaaaaaatttgggtttgtattgtatcgatgtactctatcaatttgaatgaattgaatatcgtttattttt 38530392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 219
Target Start/End: Complemental strand, 53155196 - 53155090
Alignment:
Q  113 ttgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgttta 212  Q
    ||||| ||||||||  || || ||| ||||||||||||   | ||| ||||| |||||||| |||||||| ||| ||||| ||| | |||||||||||||    
T  53155196 ttgtgagtttgttcacagattattcatttttgtttttagcgaatttgaatttgtattgtatcgatgtactctatcaatttaaatgaatgaatatcgttta 53155097  T
Q  213 tttttgt 219  Q
    |||||||    
T  53155096 tttttgt 53155090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 2192488 - 2192545
Alignment:
Q  160 aatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttattttt 217  Q
    ||||| |||||||| |||||||| ||| ||||||||| | ||||||||||||||||||    
T  2192488 aatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttattttt 2192545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 166 - 219
Target Start/End: Complemental strand, 48652162 - 48652109
Alignment:
Q  166 tattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||||||| |||||||||||| ||||||||| | |||||||| |||||||||||    
T  48652162 tattgtatcgatgtactttatcaatttgaatgaatgaatatcatttatttttgt 48652109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 136 - 216
Target Start/End: Complemental strand, 32080506 - 32080426
Alignment:
Q  136 tcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttt 216  Q
    |||||||||||||||   | ||| ||||| |||||||| |||||||| ||| ||||||||| |  ||||||||||||||||    
T  32080506 tcctttttgtttttagcgaatttgaatttgtattgtatcgatgtactctatcaatttgaatgaaagaatatcgtttatttt 32080426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 36691517 - 36691461
Alignment:
Q  161 atttatattgtattgatgtactttatgaatttgaattattgaatatcgtttattttt 217  Q
    |||| |||||||| ||||||||||||  |||||||| | ||||||||||||||||||    
T  36691517 atttgtattgtatcgatgtactttatcgatttgaatgaatgaatatcgtttattttt 36691461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 54238796 - 54238683
Alignment:
Q  102 taacatagttattgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattg 201  Q
    |||||| ||| ||||| ||||||||  || ||| |||||||| ||||||   | ||| ||||| ||||||||  ||||||||||| ||||||||    ||    
T  54238796 taacatggttgttgtgagtttgttcacagattcatcctttttatttttagcgaatttgaatttgtattgtatcaatgtactttatcaatttgaa----tg 54238701  T
Q  202 aatatcgtttatttttgt 219  Q
    ||||||||||||||||||    
T  54238700 aatatcgtttatttttgt 54238683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 219
Target Start/End: Complemental strand, 36624006 - 36623923
Alignment:
Q  136 tcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||||||||||||||   | |||  ||||||||||||  |||||||| ||| ||||||||| | |||||||| |||||||||||    
T  36624006 tcctttttgtttttagtgaatttggatttatattgtaccgatgtactctatcaatttgaatgaatgaatatcatttatttttgt 36623923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 55455272 - 55455331
Alignment:
Q  160 aatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    ||||| ||||||||  ||||||| ||| ||||||||| | ||||||||||||||||||||    
T  55455272 aatttgtattgtatcaatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 55455331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 24483414 - 24483356
Alignment:
Q  161 atttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||| |||| ||| |||||||| ||| ||||||||| | ||||||||||||||||||||    
T  24483414 atttgtattctatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 24483356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 139 - 217
Target Start/End: Complemental strand, 42167801 - 42167723
Alignment:
Q  139 tttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttattttt 217  Q
    ||||||||||||  || |||||||||||||||||| ||| | || | | ||||||||| | |||||||| |||||||||    
T  42167801 tttttgtttttagcaattttaaatttatattgtatcgatattctctgtcaatttgaatgaatgaatatcatttattttt 42167723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 219
Target Start/End: Original strand, 48855240 - 48855346
Alignment:
Q  113 ttgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgttta 212  Q
    ||||| |||| ||| ||| ||| |||||||||||||||   | |||  |||| |||||| | |||||||| ||| ||||||||| | | |||||||||||    
T  48855240 ttgtgagtttattcatagattcatcctttttgtttttagcgaatttggatttgtattgtttcgatgtactctatcaatttgaatgaattaatatcgttta 48855339  T
Q  213 tttttgt 219  Q
    |||||||    
T  48855340 tttttgt 48855346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 114 - 219
Target Start/End: Complemental strand, 105812 - 105708
Alignment:
Q  114 tgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttat 213  Q
    |||| ||||||||| || ||| ||||||||||| |||   ||||| | ||| ||||||||  ||||||| ||| ||||||||| | ||||||| ||||||    
T  105812 tgtgagtttgttcggagattcatcctttttgttcttagtgactttga-tttgtattgtatcaatgtactctatcaatttgaatgaatgaatattgtttat 105714  T
Q  214 ttttgt 219  Q
    ||||||    
T  105713 ttttgt 105708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 207
Target Start/End: Original strand, 7658400 - 7658453
Alignment:
Q  154 actttaaatttatattgtattgatgtactttatgaatttgaattattgaatatc 207  Q
    ||||||||||||||||||||  ||||||| ||| ||||||||| | ||||||||    
T  7658400 actttaaatttatattgtatcaatgtactatatcaatttgaatgaatgaatatc 7658453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 114 - 219
Target Start/End: Original strand, 39610571 - 39610675
Alignment:
Q  114 tgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttat 213  Q
    |||| ||||||||  || ||| |||||||||||||||   | ||| ||||| ||||||||  ||||||| ||| ||||||||| | ||||||||| ||||    
T  39610571 tgtgagtttgttcacagattcatcctttttgtttttagcgaatttgaatttgtattgtatcaatgtactctattaatttgaatgaatgaatatcg-ttat 39610669  T
Q  214 ttttgt 219  Q
    ||||||    
T  39610670 ttttgt 39610675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 136 - 216
Target Start/End: Complemental strand, 1074637 - 1074557
Alignment:
Q  136 tcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttt 216  Q
    |||||||||||||||   | |||  |||| |||| ||| |||||||| ||| ||||||||| | |||||||||||||||||    
T  1074637 tcctttttgtttttagcgaatttggatttgtattatatcgatgtactctatcaatttgaatgaatgaatatcgtttatttt 1074557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 22893491 - 22893443
Alignment:
Q  102 taacatagttattgtgggtttgttcgtagtttcttcctttttgttttta 150  Q
    |||||||||| ||||| ||||||||| || ||| |||||||||||||||    
T  22893491 taacatagttgttgtgtgtttgttcgcagattcatcctttttgttttta 22893443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 167 - 219
Target Start/End: Complemental strand, 25939214 - 25939162
Alignment:
Q  167 attgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    ||||||| |||||||||||| ||||||||| | |||||||| ||||| |||||    
T  25939214 attgtatcgatgtactttatcaatttgaatgaatgaatatcatttatatttgt 25939162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 167 - 219
Target Start/End: Complemental strand, 40461710 - 40461658
Alignment:
Q  167 attgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    ||||||| |||||||||||| ||||||||| | | |||||| |||||||||||    
T  40461710 attgtatcgatgtactttatcaatttgaataaattaatatcatttatttttgt 40461658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 54706450 - 54706394
Alignment:
Q  161 atttatattgtattgatgtactttatgaatttgaattattgaatatcgtttattttt 217  Q
    |||| |||||||  |||||||| ||| ||||||||| | ||||||||||||||||||    
T  54706450 atttgtattgtaacgatgtactctatcaatttgaatgaatgaatatcgtttattttt 54706394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 119 - 217
Target Start/End: Complemental strand, 22398 - 22300
Alignment:
Q  119 gtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttattttt 217  Q
    ||||||||| || ||  ||||||||||||||||  |||||||| || |||| ||| |||||||||||| ||||||||| | ||||||||||| ||||||    
T  22398 gtttgttcgcagatttatcctttttgtttttacctactttaaaattgtattatatcgatgtactttattaatttgaatgaatgaatatcgttcattttt 22300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 219
Target Start/End: Original strand, 35461 - 35544
Alignment:
Q  136 tcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||||||||||||||  || |||  |||| |||||||| |||||||| ||| ||||||||| | ||||||||||||||||||||    
T  35461 tcctttttgtttttagcaaatttggatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 35544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 113 - 219
Target Start/End: Complemental strand, 3825 - 3719
Alignment:
Q  113 ttgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgttta 212  Q
    ||||| ||||||||  || ||| ||||||||||||||||  | |||  |||| |||||||| |||||||| ||| ||||||||| | |||||||||||||    
T  3825 ttgtgagtttgttcacagattcatcctttttgtttttaccgaatttggatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgttta 3726  T
Q  213 tttttgt 219  Q
     ||||||    
T  3725 cttttgt 3719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 2159 - 2102
Alignment:
Q  160 aatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttattttt 217  Q
    ||||| |||||||| |||||||||||| ||||||||| | ||||||||||||||||||    
T  2159 aatttgtattgtatcgatgtactttatcaatttgaatgaatgaatatcgtttattttt 2102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 114 - 219
Target Start/End: Complemental strand, 404005 - 403900
Alignment:
Q  114 tgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttat 213  Q
    |||| ||||||||  || ||| ||||||||||||| |   | ||| ||||| |||||||| |||||||| ||| ||||||||| | ||||||||||||||    
T  404005 tgtgagtttgttcacagattcatcctttttgttttcagcgaatttgaatttgtattgtatcgatgtactctattaatttgaatgaatgaatatcgtttat 403906  T
Q  214 ttttgt 219  Q
    ||||||    
T  403905 ttttgt 403900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1473 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold1473
Description:

Target: scaffold1473; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 145 - 216
Target Start/End: Complemental strand, 1509 - 1438
Alignment:
Q  145 tttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttt 216  Q
    |||||| |||||||||||||||||| |||| || |||| ||| ||||| ||| | |||||||||||||||||    
T  1509 tttttataaactttaaatttatattttattaatttactctattaatttaaataaatgaatatcgtttatttt 1438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 219
Target Start/End: Complemental strand, 6888 - 6781
Alignment:
Q  113 ttgtgggtttgttcgtagtttcttcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttg-aattattgaatatcgttt 211  Q
    ||||| ||||||||  || ||| |||||||||||||||   | ||| ||||| |||||||| |||||||| ||| |||||| ||| | ||||||||||||    
T  6888 ttgtgagtttgttcacagattcatcctttttgtttttagcgaatttgaatttgtattgtatcgatgtactctatcaatttgaaatgaatgaatatcgttt 6789  T
Q  212 atttttgt 219  Q
    || |||||    
T  6788 atatttgt 6781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 219
Target Start/End: Original strand, 74550 - 74633
Alignment:
Q  136 tcctttttgtttttacaaactttaaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||||||||||||||   | |||  |||| |||||||| |||||||| ||| ||||| ||| | ||||||||||||||||||||    
T  74550 tcctttttgtttttagcgaatttggatttgtattgtatcgatgtactctatcaatttaaataaatgaatatcgtttatttttgt 74633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 159 - 219
Target Start/End: Complemental strand, 5252 - 5192
Alignment:
Q  159 aaatttatattgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    |||||| |||| ||| |||||||| ||| ||||||||| | |||||||| |||||||||||    
T  5252 aaatttgtattatatcgatgtactctataaatttgaatgaatgaatatcatttatttttgt 5192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 167 - 219
Target Start/End: Complemental strand, 896 - 844
Alignment:
Q  167 attgtattgatgtactttatgaatttgaattattgaatatcgtttatttttgt 219  Q
    ||||||| |||||||| ||| ||||||||| | |||||||| |||||||||||    
T  896 attgtatcgatgtactctataaatttgaataaatgaatatcatttatttttgt 844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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