View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14646_high_10 (Length: 315)
Name: NF14646_high_10
Description: NF14646
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14646_high_10 |
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Alignment Details
Target: chr3 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 16 - 298
Target Start/End: Original strand, 24689244 - 24689526
Alignment:
| Q |
16 |
gaacctgtgatttggggaagaagatgaactgaatagatctacgaattgaacacaatacattgagaactaagttatatagctcttgttttcattacagnnn |
115 |
Q |
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| T |
24689244 |
gaacctgtgatttggggaagaagatgaactgaatagatctacgaattgaacacaatacattgagaactaagttatatagctcttgttttcattacagaaa |
24689343 |
T |
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| Q |
116 |
nnnnnnnnngaagggaaaggaaaggctaacaatatgctatccgactaactaacggtattcagactaactaaactagttatcctaattatcctcatatggg |
215 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24689344 |
aacaaaaaagaagggaaaggaaaggctaacaatatgctatccgactaactaacggtattcagactaactaaactagttatcctaattatcctcatatggg |
24689443 |
T |
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| Q |
216 |
ttaatgacagatcaagagtataaagtttgaagtccattgttgaaaggttgaagatcaggatagaattggtgaacgtgtatgct |
298 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24689444 |
ttaatgacagatcaagagtataaagtttgaagtccattgttgaaaggttgaagatcaggatagaattggtgaacgtgtatgct |
24689526 |
T |
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