View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14646_high_8 (Length: 328)
Name: NF14646_high_8
Description: NF14646
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14646_high_8 |
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Alignment Details
Target: chr4 (Bit Score: 310; Significance: 1e-175; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 310; E-Value: 1e-175
Query Start/End: Original strand, 1 - 314
Target Start/End: Original strand, 33900197 - 33900510
Alignment:
| Q |
1 |
tggaataagttctctatattcctgaggcaaagattacacattaaggtaatattgcaactcgtcatcatcaagtttttatttgtaggtacatgatcatgca |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33900197 |
tggaataagttctctatattcctgaggcaaagattacacattaaggtaatattgcaactcgtcatcatcaagtttttatttgtaggtacatgatcatgca |
33900296 |
T |
|
| Q |
101 |
ttaattaataacctccatacataagactttgaaggaggaacatctagactccatatttatttagctagtgaaagtcttgatattgttggagtttgataga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
33900297 |
ttaattaataacctccatacataagactttgaaggaggaacatctagactccatatttatttagctagtgcaagtcttgatattgttggagtttgataga |
33900396 |
T |
|
| Q |
201 |
gtaagctttaagttgcaagtcaccatttacaaatgcaccataagttggcaagtagattttgtctattattcatattaaataacttaaattgtaagacaga |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33900397 |
gtaagctttaagttgcaagtcaccatttacaaatgcaccataagttggcaagtagattttgtctattattcatattaaataacttaaattgtaagacaga |
33900496 |
T |
|
| Q |
301 |
taaatgattttaat |
314 |
Q |
| |
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|||||||||||||| |
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| T |
33900497 |
taaatgattttaat |
33900510 |
T |
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