View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14646_low_5 (Length: 483)

Name: NF14646_low_5
Description: NF14646
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14646_low_5
NF14646_low_5
[»] chr7 (29 HSPs)
chr7 (1-482)||(45758158-45758653)
chr7 (258-327)||(43346777-43346846)
chr7 (259-327)||(27028321-27028389)
chr7 (257-327)||(13095900-13095970)
chr7 (259-327)||(38578866-38578934)
chr7 (257-323)||(22993364-22993430)
chr7 (257-323)||(23658225-23658291)
chr7 (258-327)||(8734684-8734753)
chr7 (258-327)||(21190778-21190847)
chr7 (257-322)||(32768984-32769049)
chr7 (257-323)||(5069812-5069878)
chr7 (257-327)||(21530790-21530860)
chr7 (258-327)||(24969324-24969393)
chr7 (258-327)||(34659268-34659337)
chr7 (258-327)||(45697188-45697257)
chr7 (258-327)||(48804725-48804794)
chr7 (259-327)||(3603399-3603467)
chr7 (275-327)||(16802165-16802217)
chr7 (275-327)||(38988942-38988994)
chr7 (259-327)||(41945515-41945583)
chr7 (257-324)||(28744207-28744274)
chr7 (257-320)||(48244353-48244416)
chr7 (257-327)||(17748379-17748449)
chr7 (257-327)||(42210259-42210329)
chr7 (257-327)||(43861969-43862039)
chr7 (257-327)||(47341918-47341988)
chr7 (258-327)||(39474982-39475051)
chr7 (259-327)||(3353466-3353534)
chr7 (257-321)||(14650365-14650429)
[»] chr5 (33 HSPs)
chr5 (257-327)||(4016252-4016322)
chr5 (257-325)||(40773315-40773383)
chr5 (257-327)||(38897716-38897786)
chr5 (257-327)||(19572764-19572834)
chr5 (257-327)||(21375391-21375461)
chr5 (279-325)||(30995163-30995209)
chr5 (257-327)||(42086367-42086437)
chr5 (259-328)||(2485235-2485304)
chr5 (258-327)||(14728123-14728192)
chr5 (258-319)||(28857194-28857255)
chr5 (279-327)||(20228757-20228805)
chr5 (273-327)||(6764470-6764524)
chr5 (257-327)||(9805044-9805114)
chr5 (257-327)||(39099776-39099846)
chr5 (258-323)||(7866625-7866690)
chr5 (258-327)||(8513559-8513628)
chr5 (258-327)||(18294482-18294551)
chr5 (258-327)||(20255409-20255478)
chr5 (258-303)||(28857013-28857058)
chr5 (273-326)||(41801018-41801071)
chr5 (276-327)||(22295256-22295307)
chr5 (260-327)||(35561818-35561885)
chr5 (257-327)||(1538471-1538541)
chr5 (257-327)||(3653911-3653981)
chr5 (257-327)||(5731917-5731987)
chr5 (257-327)||(13664300-13664370)
chr5 (257-327)||(42861215-42861285)
chr5 (257-326)||(5079372-5079440)
chr5 (258-327)||(20682615-20682684)
chr5 (258-327)||(40117455-40117524)
chr5 (258-327)||(43399168-43399237)
chr5 (164-212)||(28838141-28838189)
chr5 (295-327)||(38369739-38369771)
[»] chr1 (33 HSPs)
chr1 (258-327)||(16956506-16956575)
chr1 (258-323)||(40288476-40288541)
chr1 (257-327)||(34719816-34719886)
chr1 (257-327)||(8764031-8764101)
chr1 (257-327)||(17642002-17642072)
chr1 (257-323)||(18915911-18915977)
chr1 (257-327)||(37339860-37339930)
chr1 (257-327)||(43959819-43959889)
chr1 (258-327)||(4581681-4581750)
chr1 (259-327)||(2567316-2567384)
chr1 (273-327)||(15466005-15466059)
chr1 (257-327)||(26325852-26325922)
chr1 (258-324)||(26660181-26660246)
chr1 (257-327)||(49078154-49078224)
chr1 (258-323)||(2980930-2980995)
chr1 (258-327)||(5855562-5855631)
chr1 (258-327)||(10172970-10173039)
chr1 (259-324)||(50371834-50371899)
chr1 (258-326)||(11397888-11397956)
chr1 (275-327)||(21849221-21849273)
chr1 (277-327)||(18708558-18708608)
chr1 (257-327)||(41663854-41663924)
chr1 (258-327)||(6899598-6899667)
chr1 (258-327)||(9659178-9659247)
chr1 (258-327)||(10422828-10422897)
chr1 (258-323)||(15238105-15238170)
chr1 (274-327)||(25165440-25165493)
chr1 (258-327)||(32142845-32142914)
chr1 (258-327)||(33418114-33418183)
chr1 (164-197)||(42694469-42694502)
chr1 (258-327)||(45361881-45361950)
chr1 (258-327)||(50503360-50503429)
chr1 (259-327)||(33004015-33004083)
[»] chr3 (36 HSPs)
chr3 (260-327)||(3507534-3507601)
chr3 (257-323)||(7310701-7310767)
chr3 (257-323)||(28572209-28572275)
chr3 (258-328)||(50753340-50753410)
chr3 (257-326)||(13893966-13894035)
chr3 (259-323)||(30767247-30767311)
chr3 (264-327)||(50405608-50405671)
chr3 (260-327)||(51682955-51683022)
chr3 (257-327)||(3136692-3136762)
chr3 (257-323)||(15320229-15320295)
chr3 (257-327)||(29127958-29128028)
chr3 (258-320)||(47164152-47164214)
chr3 (257-326)||(44064584-44064653)
chr3 (258-327)||(55069678-55069747)
chr3 (259-327)||(54261265-54261333)
chr3 (276-327)||(43330749-43330800)
chr3 (273-327)||(8164592-8164646)
chr3 (257-327)||(24506646-24506716)
chr3 (257-327)||(26043851-26043921)
chr3 (257-323)||(26361965-26362031)
chr3 (257-327)||(34374440-34374510)
chr3 (257-315)||(36043672-36043730)
chr3 (273-327)||(41630526-41630580)
chr3 (257-327)||(47219183-47219253)
chr3 (257-327)||(47749103-47749173)
chr3 (257-327)||(49021201-49021271)
chr3 (258-327)||(2668100-2668169)
chr3 (258-327)||(10043721-10043790)
chr3 (258-317)||(7650276-7650335)
chr3 (273-328)||(45402365-45402420)
chr3 (258-327)||(7328883-7328951)
chr3 (258-327)||(7648779-7648848)
chr3 (258-327)||(23511606-23511675)
chr3 (258-327)||(30045860-30045929)
chr3 (259-327)||(35315995-35316063)
chr3 (259-327)||(45877493-45877561)
[»] chr6 (26 HSPs)
chr6 (257-327)||(9633622-9633692)
chr6 (257-327)||(30788850-30788920)
chr6 (258-327)||(3601127-3601196)
chr6 (257-327)||(5029860-5029930)
chr6 (257-327)||(21898691-21898761)
chr6 (257-327)||(29444762-29444832)
chr6 (258-327)||(5253221-5253290)
chr6 (273-322)||(14326045-14326094)
chr6 (273-322)||(14419055-14419104)
chr6 (258-327)||(30410488-30410557)
chr6 (257-327)||(12606473-12606543)
chr6 (257-327)||(12635857-12635927)
chr6 (257-323)||(19089545-19089611)
chr6 (260-327)||(11142646-11142713)
chr6 (283-326)||(33940055-33940098)
chr6 (257-327)||(8932704-8932774)
chr6 (257-327)||(8944170-8944240)
chr6 (257-327)||(13468976-13469046)
chr6 (257-327)||(14107355-14107425)
chr6 (257-323)||(14783417-14783483)
chr6 (277-323)||(19230576-19230622)
chr6 (273-310)||(3030656-3030693)
chr6 (257-322)||(6606094-6606159)
chr6 (258-327)||(10311467-10311536)
chr6 (257-305)||(13116127-13116175)
chr6 (275-327)||(13391329-13391381)
[»] chr2 (40 HSPs)
chr2 (257-327)||(12455349-12455419)
chr2 (257-327)||(10823099-10823169)
chr2 (258-327)||(25540402-25540471)
chr2 (258-323)||(41031904-41031969)
chr2 (275-327)||(45263682-45263734)
chr2 (257-327)||(8410170-8410240)
chr2 (257-323)||(34346284-34346350)
chr2 (257-327)||(38005441-38005511)
chr2 (257-327)||(44945632-44945702)
chr2 (258-327)||(28616377-28616446)
chr2 (259-327)||(18649025-18649093)
chr2 (264-327)||(10669631-10669694)
chr2 (257-323)||(2528338-2528404)
chr2 (257-323)||(7747317-7747383)
chr2 (257-327)||(22593173-22593242)
chr2 (257-327)||(41220674-41220744)
chr2 (279-324)||(7787098-7787143)
chr2 (258-327)||(10026614-10026683)
chr2 (258-327)||(18902528-18902597)
chr2 (294-327)||(39806919-39806952)
chr2 (258-327)||(44139523-44139592)
chr2 (259-327)||(9360747-9360815)
chr2 (259-327)||(21286483-21286551)
chr2 (260-327)||(10046477-10046544)
chr2 (257-327)||(331540-331610)
chr2 (275-325)||(3848929-3848979)
chr2 (257-327)||(15234058-15234128)
chr2 (284-326)||(20533158-20533200)
chr2 (273-323)||(39201521-39201571)
chr2 (257-326)||(3811688-3811757)
chr2 (259-324)||(16813164-16813229)
chr2 (259-324)||(16852443-16852508)
chr2 (257-326)||(20116609-20116678)
chr2 (259-303)||(792217-792261)
chr2 (279-327)||(26805335-26805383)
chr2 (259-327)||(27725979-27726047)
chr2 (259-327)||(33005790-33005858)
chr2 (259-323)||(35946781-35946845)
chr2 (287-327)||(41187888-41187928)
chr2 (259-303)||(44773326-44773370)
[»] scaffold0291 (1 HSPs)
scaffold0291 (258-327)||(6897-6966)
[»] chr8 (21 HSPs)
chr8 (258-327)||(43032944-43033013)
chr8 (260-327)||(15884556-15884623)
chr8 (258-327)||(45521211-45521280)
chr8 (257-323)||(2964123-2964189)
chr8 (258-324)||(8997542-8997608)
chr8 (257-327)||(10927649-10927719)
chr8 (258-323)||(17981488-17981553)
chr8 (258-327)||(34710565-34710634)
chr8 (258-327)||(39969913-39969982)
chr8 (258-326)||(43027349-43027417)
chr8 (260-327)||(4479296-4479363)
chr8 (257-324)||(22212512-22212579)
chr8 (257-327)||(583855-583925)
chr8 (257-327)||(8803097-8803167)
chr8 (257-327)||(11298264-11298334)
chr8 (273-327)||(12754068-12754122)
chr8 (257-327)||(14846618-14846688)
chr8 (281-326)||(13831035-13831080)
chr8 (275-327)||(18374053-18374105)
chr8 (164-212)||(33129255-33129303)
chr8 (259-323)||(44893277-44893341)
[»] chr4 (37 HSPs)
chr4 (258-327)||(47078502-47078571)
chr4 (259-327)||(14124060-14124128)
chr4 (257-327)||(36262764-36262834)
chr4 (258-327)||(38166071-38166140)
chr4 (259-327)||(7246645-7246713)
chr4 (259-327)||(14567283-14567351)
chr4 (257-327)||(1940774-1940844)
chr4 (258-327)||(3159467-3159536)
chr4 (258-327)||(5472846-5472915)
chr4 (258-323)||(16645166-16645231)
chr4 (258-327)||(48834698-48834767)
chr4 (258-327)||(55921078-55921147)
chr4 (280-327)||(3574466-3574513)
chr4 (260-327)||(40780861-40780928)
chr4 (257-327)||(21192684-21192754)
chr4 (261-327)||(21429345-21429411)
chr4 (273-327)||(49260678-49260732)
chr4 (258-327)||(15732446-15732515)
chr4 (258-327)||(47682380-47682449)
chr4 (259-327)||(2559351-2559419)
chr4 (263-327)||(3507314-3507378)
chr4 (259-327)||(15839934-15840002)
chr4 (259-327)||(42722576-42722644)
chr4 (260-327)||(48352509-48352576)
chr4 (273-324)||(54946296-54946347)
chr4 (257-327)||(36145212-36145282)
chr4 (273-327)||(53354576-53354630)
chr4 (257-327)||(53599104-53599174)
chr4 (258-327)||(17080087-17080156)
chr4 (274-327)||(23788441-23788494)
chr4 (258-327)||(24166494-24166563)
chr4 (257-322)||(38168305-38168370)
chr4 (275-327)||(8424598-8424650)
chr4 (259-319)||(24478983-24479043)
chr4 (259-327)||(29895831-29895899)
chr4 (273-321)||(30317283-30317331)
chr4 (259-327)||(31588730-31588798)
[»] scaffold0009 (1 HSPs)
scaffold0009 (259-327)||(42831-42899)
[»] scaffold0010 (1 HSPs)
scaffold0010 (257-327)||(155708-155778)
[»] scaffold0005 (1 HSPs)
scaffold0005 (259-327)||(250024-250092)
[»] scaffold0029 (1 HSPs)
scaffold0029 (257-323)||(41090-41156)
[»] scaffold0006 (1 HSPs)
scaffold0006 (257-327)||(68556-68626)
[»] scaffold0011 (2 HSPs)
scaffold0011 (259-327)||(224359-224427)
scaffold0011 (260-327)||(186559-186626)
[»] scaffold0170 (1 HSPs)
scaffold0170 (265-327)||(9887-9949)
[»] scaffold0002 (1 HSPs)
scaffold0002 (258-323)||(616-681)
[»] scaffold0209 (1 HSPs)
scaffold0209 (257-327)||(12615-12685)
[»] scaffold0116 (1 HSPs)
scaffold0116 (273-327)||(17432-17486)
[»] scaffold0316 (1 HSPs)
scaffold0316 (258-327)||(1612-1681)
[»] scaffold0376 (1 HSPs)
scaffold0376 (259-323)||(12716-12780)
[»] scaffold0223 (1 HSPs)
scaffold0223 (259-327)||(16921-16989)
[»] scaffold0019 (1 HSPs)
scaffold0019 (164-212)||(43200-43248)


Alignment Details
Target: chr7 (Bit Score: 273; Significance: 1e-152; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 1 - 482
Target Start/End: Complemental strand, 45758653 - 45758158
Alignment:
Q  1 catatttctcaaccatatattatttgctaatgcctttttcttggtcatattacccaaaatttaaatgatttatcatttcgttctcgcnnnnnnnnnntag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |          |||    
T  45758653 catatttctcaaccatatattatttgctaatgcctttttcttggtcatattacccaaaatttaaatgatttatcatttcgttctcacaaaaaaaa--tag 45758556  T
Q  101 cgagtcattatttaaaagttttttcttcgatacatagcattctcttttatttatattacatgagttaaatatgtttttctccctataaatatactaacat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45758555 cgagtcattatttaaaagttttttcttcgatacatagcattctcttttatttatattacatgagttaaatatgtttttctccctataaatatactaacat 45758456  T
Q  201 ttgtttttagtcatcatnnnnnnnnn--tcaaatttttatccaaaacataannnnnnnggctttcgcactggtgtccgacccaccaaagatgagcgacta 298  Q
    ||||||||||||||||            |||||||||||||||||||||||       ||||||||||| ||| ||||||||||||||| || |||| ||    
T  45758455 ttgtttttagtcatcacaaaaaaaaaaatcaaatttttatccaaaacataatttttttggctttcgcacgggtttccgacccaccaaaggtgtgcgatta 45758356  T
Q  299 atccgactcgtgtgtagaggcatgcgcac-----aagtgatacattgatattggtgaggccttaaaatattgttaactaaacaagttaatcatttaatcg 393  Q
    |||| ||||||||  ||||||||||||||     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  45758355 atccaactcgtgt--agaggcatgcgcactggccaagtgatacattgatattggtgaggccttaaaatattgttaactaaacaagttaatcatttcatcg 45758258  T
Q  394 ctaagtgaaaataaataaaacaaaattattt-----------tatcggaacttaaatttagggtaaactattatgtagaaatcaattgcctctatttcat 482  Q
    | |||||||||||||||||||||||||||||           |||||||  || ||||| |||||||||||||||||  |||||||||||||||||||||    
T  45758257 ccaagtgaaaataaataaaacaaaattatttattattttatatatcggatttttaattttgggtaaactattatgtatcaatcaattgcctctatttcat 45758158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 258 - 327
Target Start/End: Original strand, 43346777 - 43346846
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |||||  ||||||||||||||||    
T  43346777 gctttcgcactggtttccgacccaccaaagatgagcgactaatccggctcgtacgtagaggcatgcgcac 43346846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 259 - 327
Target Start/End: Complemental strand, 27028389 - 27028321
Alignment:
Q  259 ctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||| ||| ||||||||||||||| ||||||||||||||  ||| |||||||||||||||||||    
T  27028389 ctttcgcaccggtttccgacccaccaaaggtgagcgactaatccagctcatgtgtagaggcatgcgcac 27028321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 257 - 327
Target Start/End: Complemental strand, 13095970 - 13095900
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||| |||| ||| ||||||||||||||| ||||||||||||||| ||| || ||||||||||||||||    
T  13095970 ggcttttgcaccggtttccgacccaccaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcac 13095900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 259 - 327
Target Start/End: Original strand, 38578866 - 38578934
Alignment:
Q  259 ctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||| ||| ||||||||||||||| || |||||||||||| ||| || ||||||||||||||||    
T  38578866 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcac 38578934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 257 - 323
Target Start/End: Original strand, 22993364 - 22993430
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgc 323  Q
    ||||||||||| ||| || |||||||||||| |||||||||||||||  ||||| ||||||||||||    
T  22993364 ggctttcgcaccggtttctgacccaccaaaggtgagcgactaatccggttcgtgcgtagaggcatgc 22993430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 257 - 323
Target Start/End: Complemental strand, 23658291 - 23658225
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgc 323  Q
    |||||| |||| ||| || |||||||||||||||  ||||||||||| |||||||||||||||||||    
T  23658291 ggcttttgcacaggtttctgacccaccaaagatggacgactaatccggctcgtgtgtagaggcatgc 23658225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 327
Target Start/End: Original strand, 8734684 - 8734753
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||||| ||| ||||||||||||||| || |||||||||| | |||||| || |||||||||||||    
T  8734684 gctttcgcaccggtttccgacccaccaaaggtgggcgactaatctggctcgtgcgttgaggcatgcgcac 8734753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 327
Target Start/End: Original strand, 21190778 - 21190847
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||||| ||| | ||||||||||  |||| |||||||||| |||||||| ||||||||||||||||    
T  21190778 gctttcgcaccggttttcgacccaccattgatgggcgactaatctgactcgtgcgtagaggcatgcgcac 21190847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 257 - 322
Target Start/End: Complemental strand, 32769049 - 32768984
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatg 322  Q
    ||||||| ||| ||| ||||| ||||||||| ||| |||||||||||||||||| |||||||||||    
T  32769049 ggctttcacaccggtttccgatccaccaaaggtgaacgactaatccgactcgtgcgtagaggcatg 32768984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 323
Target Start/End: Original strand, 5069812 - 5069878
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgc 323  Q
    ||||||||||  ||| ||||||||||||||| || |||||||||||| || ||| ||||||||||||    
T  5069812 ggctttcgcatcggtttccgacccaccaaaggtgggcgactaatccggcttgtgcgtagaggcatgc 5069878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 327
Target Start/End: Complemental strand, 21530860 - 21530790
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||| || ||| ||||||||||||||| ||||||| |||| || |||||| ||||||||||| ||||    
T  21530860 ggctttcgaaccggtttccgacccaccaaaggtgagcgattaattcggctcgtgcgtagaggcatgtgcac 21530790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 258 - 327
Target Start/End: Original strand, 24969324 - 24969393
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||||| ||| ||||| ||| ||||||||||||| |||||||||| ||  ||||||||| ||||||    
T  24969324 gctttcgcaccggtttccgagccatcaaagatgagcgattaatccgacttgtacgtagaggcacgcgcac 24969393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 258 - 327
Target Start/End: Complemental strand, 34659337 - 34659268
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||||| ||| | |||| |||||| | || |||||||||||| |||||| ||||||||||||||||    
T  34659337 gctttcgcaccggttttcgacacaccaatggtgggcgactaatccggctcgtgcgtagaggcatgcgcac 34659268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 258 - 327
Target Start/End: Original strand, 45697188 - 45697257
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||| |||||| ||||||||||||||| ||  ||||||| || |||| || ||||||||||||||||    
T  45697188 gctttcgtactggtttccgacccaccaaaggtggacgactaacccaactcatgcgtagaggcatgcgcac 45697257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 258 - 327
Target Start/End: Complemental strand, 48804794 - 48804725
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||||| ||| ||||||||||||| | ||  ||||||||||| ||| || ||||||||||||||||    
T  48804794 gctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcac 48804725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 259 - 327
Target Start/End: Complemental strand, 3603467 - 3603399
Alignment:
Q  259 ctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||| | | ||||||||||||||  ||| ||| ||||||| |||||| ||||||||||||||||    
T  3603467 ctttcgcaccgatttccgacccaccaaaagtgaacgattaatccggctcgtgcgtagaggcatgcgcac 3603399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 16802217 - 16802165
Alignment:
Q  275 cgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||||| | ||||||||||||||| |||||| |||||||||| |||||    
T  16802217 cgacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatacgcac 16802165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 38988994 - 38988942
Alignment:
Q  275 cgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||||||||||||||||||||||||  || || ||||||||||| ||||    
T  38988994 cgacccaccaaagatgagcgactaatccggttcatgcgtagaggcatgtgcac 38988942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 259 - 327
Target Start/End: Complemental strand, 41945583 - 41945515
Alignment:
Q  259 ctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||| | | |||||| |||||||| ||  ||||||||||| |||||| ||||||||||||||||    
T  41945583 ctttcgcaccgatttccgactcaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcac 41945515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 324
Target Start/End: Complemental strand, 28744274 - 28744207
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcg 324  Q
    |||||||||||  || ||||||||||||||| ||  ||||||||||| ||||| |||||||| |||||    
T  28744274 ggctttcgcaccagtttccgacccaccaaaggtggacgactaatccggctcgtatgtagaggtatgcg 28744207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 320
Target Start/End: Original strand, 48244353 - 48244416
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggca 320  Q
    ||||||||||| ||| | ||| ||||||||| ||||||||||||||| ||| || |||||||||    
T  48244353 ggctttcgcaccggttttcgatccaccaaaggtgagcgactaatccggctcatgcgtagaggca 48244416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 327
Target Start/End: Original strand, 17748379 - 17748449
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||||  ||| ||||||||| ||||| ||  ||||||||||| |||||  ||||||||||||||||    
T  17748379 ggctttcgcatcggtttccgacccaacaaaggtggacgactaatccggctcgtacgtagaggcatgcgcac 17748449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 327
Target Start/End: Original strand, 42210259 - 42210329
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||||  ||| ||||||||||||| | || | || ||||||| |||||| ||||||||||||||||    
T  42210259 ggctttcgcatcggtttccgacccaccaacggtgggtgattaatccggctcgtgcgtagaggcatgcgcac 42210329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 327
Target Start/End: Original strand, 43861969 - 43862039
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||||| ||| | ||| ||||||||| |||  |||||||||| ||| || ||||||||||||||||    
T  43861969 ggctttcgcaccggttttcgatccaccaaaggtgaatgactaatccggctcatgcgtagaggcatgcgcac 43862039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 327
Target Start/End: Complemental strand, 47341988 - 47341918
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||||| | | ||||||||||||| | ||| |||| |||||  |||||| ||||||||||||||||    
T  47341988 ggctttcgcaccgatttccgacccaccaatggtgaacgaccaatcctgctcgtgcgtagaggcatgcgcac 47341918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 327
Target Start/End: Complemental strand, 39475051 - 39474982
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||||||||| | |||||||| |||| ||  ||||||||||| ||| || ||||||| ||||||||    
T  39475051 gctttcgcactggttttcgacccactaaaggtggacgactaatccggctcatgcgtagaggtatgcgcac 39474982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 259 - 327
Target Start/End: Complemental strand, 3353534 - 3353466
Alignment:
Q  259 ctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||| ||| || || ||| ||||| ||  ||||||||||| |||||| ||||||||||||||||    
T  3353534 ctttcgcaccggtttctgatccatcaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcac 3353466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 257 - 321
Target Start/End: Complemental strand, 14650429 - 14650365
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcat 321  Q
    ||||||||||| ||| | | ||||||||||| ||||||||||| ||| ||| || ||||||||||    
T  14650429 ggctttcgcaccggttttcaacccaccaaaggtgagcgactaacccggctcatgcgtagaggcat 14650365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 5e-20; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 257 - 327
Target Start/End: Original strand, 4016252 - 4016322
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||||||||| ||||||||||||| | ||||| ||||||||| |||||||||||||||||||||||    
T  4016252 ggctttcgcactggtttccgacccaccaatggtgagcaactaatccggctcgtgtgtagaggcatgcgcac 4016322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 257 - 325
Target Start/End: Complemental strand, 40773383 - 40773315
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgc 325  Q
    ||||||||||| ||| |||||| |||||||||||| ||||||||||||||||| |||||||||||||||    
T  40773383 ggctttcgcaccggtttccgacgcaccaaagatgaacgactaatccgactcgtatgtagaggcatgcgc 40773315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 257 - 327
Target Start/End: Original strand, 38897716 - 38897786
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||||||||| ||||| ||||||||| || || ||||||||| |||||| ||||||||||||||||    
T  38897716 ggctttcgcactggtttccgatccaccaaaggtgggcaactaatccggctcgtgcgtagaggcatgcgcac 38897786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 257 - 327
Target Start/End: Complemental strand, 19572834 - 19572764
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||||||||| ||| ||||||||| | ||| ||||||||||| ||| || ||||||||||||||||    
T  19572834 ggctttcgcactggtttccaacccaccaatggtgaacgactaatccggctcatgcgtagaggcatgcgcac 19572764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 257 - 327
Target Start/End: Complemental strand, 21375461 - 21375391
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||||||||| ||||| ||| ||||||||  ||||||||||||||| || ||||| ||||||||||    
T  21375461 ggctttcgcactggtttccgatccatcaaagatggacgactaatccgactcatgcgtagaagcatgcgcac 21375391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 279 - 325
Target Start/End: Complemental strand, 30995209 - 30995163
Alignment:
Q  279 ccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgc 325  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||    
T  30995209 ccaccaaagatgagcgactaatccggctcgtgcgtagaggcatgcgc 30995163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 257 - 327
Target Start/End: Complemental strand, 42086437 - 42086367
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||||| ||| ||||||||||||||| ||  ||||||||||| ||| || ||||||||||||||||    
T  42086437 ggctttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcac 42086367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 259 - 328
Target Start/End: Complemental strand, 2485304 - 2485235
Alignment:
Q  259 ctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcaca 328  Q
    ||||||||  ||| ||||||||| ||||| ||||||||||||||||||| |  |||||||||||||||||    
T  2485304 ctttcgcatcggtttccgacccatcaaaggtgagcgactaatccgactcatacgtagaggcatgcgcaca 2485235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 327
Target Start/End: Complemental strand, 14728192 - 14728123
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||||| ||| ||||||||| ||||| ||||| ||||||||| ||| || ||||||||||||||||    
T  14728192 gctttcgcaccggtttccgacccatcaaaggtgagcaactaatccggctcatgcgtagaggcatgcgcac 14728123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 319
Target Start/End: Complemental strand, 28857255 - 28857194
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggc 319  Q
    |||||||||| ||| ||||||||||||||| ||||||||||||||| ||| || ||||||||    
T  28857255 gctttcgcaccggtttccgacccaccaaaggtgagcgactaatccggctcatgcgtagaggc 28857194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 279 - 327
Target Start/End: Complemental strand, 20228805 - 20228757
Alignment:
Q  279 ccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||||||| |||||||||| ||||||||||||||||||| |||||    
T  20228805 ccaccaaagatgggcgactaatctgactcgtgtgtagaggcatacgcac 20228757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 273 - 327
Target Start/End: Original strand, 6764470 - 6764524
Alignment:
Q  273 tccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||| |||||||  |||||||||||| |||||| ||||||||||||||||    
T  6764470 tccgacccaacaaagataggcgactaatccggctcgtgcgtagaggcatgcgcac 6764524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 327
Target Start/End: Complemental strand, 9805114 - 9805044
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||||||  || ||||||||||||||| ||  ||||||||||| ||| || ||||||||||||||||    
T  9805114 ggctttcgcacctgtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcac 9805044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 327
Target Start/End: Original strand, 39099776 - 39099846
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||| |||| ||| ||||||||||||||| || |||||||||||| ||| || ||||||||||| ||||    
T  39099776 ggcttttgcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgtgcac 39099846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 258 - 323
Target Start/End: Complemental strand, 7866690 - 7866625
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgc 323  Q
    |||||||||||||| ||  ||||||||||| || ||||||||||||  ||||| ||||||||||||    
T  7866690 gctttcgcactggtttctaacccaccaaaggtgggcgactaatccggttcgtgcgtagaggcatgc 7866625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 258 - 327
Target Start/End: Complemental strand, 8513628 - 8513559
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||||| ||| ||||||||||||||| ||  ||||||||| | |||||| ||||||||||| ||||    
T  8513628 gctttcgcaccggtttccgacccaccaaaggtggacgactaatctggctcgtgcgtagaggcatgtgcac 8513559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 258 - 327
Target Start/End: Original strand, 18294482 - 18294551
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||| ||| |||| |||||||||||||||||| |||| |||||||  || |||||||||| ||||||||    
T  18294482 gcttttgcattggtttccgacccaccaaagatgggcgattaatccggttcatgtgtagaggtatgcgcac 18294551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 258 - 327
Target Start/End: Complemental strand, 20255478 - 20255409
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||||  || |||||| |||||||| ||  ||||||||||||||| || ||||||||||||||||    
T  20255478 gctttcgcaccagtttccgactcaccaaaggtggacgactaatccgactcatgcgtagaggcatgcgcac 20255409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 258 - 303
Target Start/End: Complemental strand, 28857058 - 28857013
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccg 303  Q
    |||||||||| ||| ||||||||||||||| |||||||||||||||    
T  28857058 gctttcgcaccggtttccgacccaccaaaggtgagcgactaatccg 28857013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 273 - 326
Target Start/End: Complemental strand, 41801071 - 41801018
Alignment:
Q  273 tccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgca 326  Q
    ||||||||| ||||||||| ||||||||||| |||||| |||||| ||||||||    
T  41801071 tccgacccatcaaagatgaacgactaatccggctcgtgcgtagagacatgcgca 41801018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 276 - 327
Target Start/End: Complemental strand, 22295307 - 22295256
Alignment:
Q  276 gacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||| ||||||||| |||||||||||| |||| || ||||||||||||||||    
T  22295307 gacctaccaaagataagcgactaatccaactcatgcgtagaggcatgcgcac 22295256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 327
Target Start/End: Original strand, 35561818 - 35561885
Alignment:
Q  260 tttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||| ||||| | ||||||| ||||| | ||||||||||||| | ||| |||||||||||||||||||    
T  35561818 tttcacactgatttccgacctaccaacggtgagcgactaatctggctcatgtgtagaggcatgcgcac 35561885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 327
Target Start/End: Complemental strand, 1538541 - 1538471
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||||| ||| ||||||||||||| | ||  ||| ||||||| ||| || ||||||||||||||||    
T  1538541 ggctttcgcaccggtttccgacccaccaatggtggacgattaatccggctcatgcgtagaggcatgcgcac 1538471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 327
Target Start/End: Original strand, 3653911 - 3653981
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||| |||| ||| | ||| ||||||||| ||  ||||||||||| |||||| ||||||||||||||||    
T  3653911 ggcttttgcaccggttttcgatccaccaaaggtggacgactaatccgcctcgtgcgtagaggcatgcgcac 3653981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 327
Target Start/End: Original strand, 5731917 - 5731987
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||||| ||| |||||||||| |||| ||| ||||||||| | ||| |  ||||||||||||||||    
T  5731917 ggctttcgcaccggtttccgacccactaaaggtgaacgactaatctggctcatacgtagaggcatgcgcac 5731987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 327
Target Start/End: Complemental strand, 13664370 - 13664300
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||||| ||| |||||| |||||||| ||| ||| ||||| | ||| || ||||||||||||||||    
T  13664370 ggctttcgcaccggtttccgacacaccaaaggtgatcgattaatctggctcatgcgtagaggcatgcgcac 13664300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 327
Target Start/End: Original strand, 42861215 - 42861285
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||||| ||| ||||||||||||| | ||  ||| ||||||| ||| || ||||||||||||||||    
T  42861215 ggctttcgcaccggtctccgacccaccaatggtggacgattaatccggctcatgcgtagaggcatgcgcac 42861285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 326
Target Start/End: Complemental strand, 5079440 - 5079372
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgca 326  Q
    ||||||||||| ||| | ||||| ||||||| || |||||||||||| |||||| ||||| |||||||||    
T  5079440 ggctttcgcaccggttttcgacc-accaaaggtgggcgactaatccggctcgtgcgtagaagcatgcgca 5079372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 327
Target Start/End: Original strand, 20682615 - 20682684
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||||| ||| ||| |||||| |||| ||  ||| ||||||| |||||| ||||||||||||||||    
T  20682615 gctttcgcaccggtttccaacccactaaaggtggtcgattaatccggctcgtgcgtagaggcatgcgcac 20682684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 327
Target Start/End: Complemental strand, 40117524 - 40117455
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||||| ||| | ||| ||||||||| ||| ||| ||||||| ||| || ||||||||||||||||    
T  40117524 gctttcgcaccggttttcgatccaccaaaggtgaacgattaatccggctcatgcgtagaggcatgcgcac 40117455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 327
Target Start/End: Complemental strand, 43399237 - 43399168
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||||| ||| ||||||| ||||||  ||  ||||||||||  |||||| ||||||||||||||||    
T  43399237 gctttcgcaccggtttccgaccaaccaaatgtggacgactaatcctgctcgtgcgtagaggcatgcgcac 43399168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 164 - 212
Target Start/End: Original strand, 28838141 - 28838189
Alignment:
Q  164 gttaaatatgtttttctccctataaatatactaacatttgtttttagtc 212  Q
    ||||||||||||||| ||||||||||||||| ||| |||  ||||||||    
T  28838141 gttaaatatgtttttgtccctataaatataccaacttttcgttttagtc 28838189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 295 - 327
Target Start/End: Complemental strand, 38369771 - 38369739
Alignment:
Q  295 actaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||||||||||| ||||||||||||||||    
T  38369771 actaatccgactcgtgcgtagaggcatgcgcac 38369739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 2e-19; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 258 - 327
Target Start/End: Complemental strand, 16956575 - 16956506
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||||||||| ||||||||||||||| |||| |||||||||| |||||| ||||||||||||||||    
T  16956575 gctttcgcactggtttccgacccaccaaaggtgagtgactaatccggctcgtgcgtagaggcatgcgcac 16956506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 258 - 323
Target Start/End: Original strand, 40288476 - 40288541
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgc 323  Q
    ||||| |||||||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  40288476 gcttttgcactggtttccgacccaccaaggatgagcgactaatccggctcgtgtgtagaggcatgc 40288541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 257 - 327
Target Start/End: Complemental strand, 34719886 - 34719816
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||||||  || ||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||    
T  34719886 ggctttcgcaccagtttccgacccaccaaaggtgagcgactaatctgactcgtgcgtagaggcatgcgcac 34719816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 257 - 327
Target Start/End: Complemental strand, 8764101 - 8764031
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||||| ||| ||||||||||||| | ||  ||||||||||| |||||| ||||||||||||||||    
T  8764101 ggctttcgcaccggtttccgacccaccaacggtggacgactaatccggctcgtgcgtagaggcatgcgcac 8764031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 257 - 327
Target Start/End: Original strand, 17642002 - 17642072
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||||||  || ||||||||||||||| ||  ||||||||||| |||||| ||||||||||||||||    
T  17642002 ggctttcgcaccagtttccgacccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcac 17642072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 257 - 323
Target Start/End: Complemental strand, 18915977 - 18915911
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgc 323  Q
    ||||||||||| ||| ||| ||||||||| | ||||||||||||||| |||||| ||||||||||||    
T  18915977 ggctttcgcaccggtttccaacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatgc 18915911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 257 - 327
Target Start/End: Complemental strand, 37339930 - 37339860
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||||| ||| ||| ||||||||||| || |||||||||||| |||||| || |||||||||||||    
T  37339930 ggctttcgcaccggtttccaacccaccaaaggtgggcgactaatccggctcgtgcgttgaggcatgcgcac 37339860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 257 - 327
Target Start/End: Original strand, 43959819 - 43959889
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||||| ||| ||||| |||| |||| || |||||||||||| |||||| ||||||||||||||||    
T  43959819 ggctttcgcaccggtttccgatccactaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcac 43959889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 327
Target Start/End: Original strand, 4581681 - 4581750
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||||| ||| ||||||||||||||| ||  |||||| |||| |||||| ||||||||||||||||    
T  4581681 gctttcgcaccggtttccgacccaccaaaggtggacgactattccggctcgtgcgtagaggcatgcgcac 4581750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 259 - 327
Target Start/End: Complemental strand, 2567384 - 2567316
Alignment:
Q  259 ctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||| || ||| ||||||||||||||||||  || |||||| |||||||| ||||||||||||||||    
T  2567384 ctttcgtaccggtttccgacccaccaaagatggacggctaatctgactcgtgagtagaggcatgcgcac 2567316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 273 - 327
Target Start/End: Complemental strand, 15466059 - 15466005
Alignment:
Q  273 tccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||||||||| |||||||| |||| |||||||| ||||||||||| ||||    
T  15466059 tccgacccaccaaaggtgagcgaccaatcagactcgtgcgtagaggcatgtgcac 15466005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 327
Target Start/End: Complemental strand, 26325922 - 26325852
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||||| ||| ||||||||||||| | ||  ||||||||||| ||| || ||||||||||||||||    
T  26325922 ggctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcac 26325852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 324
Target Start/End: Complemental strand, 26660246 - 26660181
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcg 324  Q
    |||||||||| ||| ||||||||||||||| || |||||||||||| ||| || |||||||||||||    
T  26660246 gctttcgcaccggtttccgacccaccaaaggtg-gcgactaatccggctcatgcgtagaggcatgcg 26660181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 327
Target Start/End: Complemental strand, 49078224 - 49078154
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||||| ||| ||||||| ||||| | ||| ||||||||||| ||| || ||||||||||||||||    
T  49078224 ggctttcgcaccggtttccgacctaccaatggtgaacgactaatccggctcatgcgtagaggcatgcgcac 49078154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 258 - 323
Target Start/End: Original strand, 2980930 - 2980995
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgc 323  Q
    |||||||||| | | |||||||||| ||| |||  |||||||||||||||||| ||||||||||||    
T  2980930 gctttcgcaccgatttccgacccactaaacatggacgactaatccgactcgtgcgtagaggcatgc 2980995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 258 - 327
Target Start/End: Complemental strand, 5855631 - 5855562
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||||  ||| |||||||||| |||| ||| ||||||||||| ||| || ||||||||||||||||    
T  5855631 gctttcgcatcggtttccgacccactaaaggtgaacgactaatccgcctcatgcgtagaggcatgcgcac 5855562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 258 - 327
Target Start/End: Original strand, 10172970 - 10173039
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||||| ||| ||||||||||||||| || |||| ||||||| ||| || ||||||||||| ||||    
T  10172970 gctttcgcaccggtttccgacccaccaaaggtgggcgagtaatccggctcatgcgtagaggcatgggcac 10173039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 259 - 324
Target Start/End: Original strand, 50371834 - 50371899
Alignment:
Q  259 ctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcg 324  Q
    ||||||||| ||| ||||| |||||||||||| |||||||||||| || ||| ||||| |||||||    
T  50371834 ctttcgcaccggtttccgatccaccaaagatgggcgactaatccggcttgtgcgtagaagcatgcg 50371899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 258 - 326
Target Start/End: Original strand, 11397888 - 11397956
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgca 326  Q
    |||||||||| | | ||||||||||||||| ||  ||||||||||||||| || |||||||||| ||||    
T  11397888 gctttcgcaccgatttccgacccaccaaaggtggacgactaatccgactcatgcgtagaggcatacgca 11397956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 21849221 - 21849273
Alignment:
Q  275 cgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||||||   ||||||||||||||| |||||| ||||||||||||||||    
T  21849221 cgacccaccaatagtgagcgactaatccggctcgtgcgtagaggcatgcgcac 21849273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 327
Target Start/End: Original strand, 18708558 - 18708608
Alignment:
Q  277 acccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||| ||||| ||||||||||||| | ||| |||||||||||||||||||    
T  18708558 acccatcaaaggtgagcgactaatctggctcatgtgtagaggcatgcgcac 18708608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 327
Target Start/End: Original strand, 41663854 - 41663924
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||||| ||| ||||||||||||| | ||  ||||||||||  ||| || ||||||||||||||||    
T  41663854 ggctttcgcaccggtttccgacccaccaatggtggacgactaatccagctcatgcgtagaggcatgcgcac 41663924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 327
Target Start/End: Complemental strand, 6899667 - 6899598
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||||| ||| ||||| ||| ||||| || |||||||||||| || ||| ||| ||||||||||||    
T  6899667 gctttcgcaccggtttccgatccatcaaaggtgggcgactaatccggcttgtgcgtaaaggcatgcgcac 6899598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 327
Target Start/End: Original strand, 9659178 - 9659247
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||||| ||| ||| ||||||||||| ||  ||||||||||| ||| || ||| ||||||||||||    
T  9659178 gctttcgcaccggtttccaacccaccaaaggtggacgactaatccggctcatgcgtaaaggcatgcgcac 9659247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 327
Target Start/End: Complemental strand, 10422897 - 10422828
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||||| ||| ||||||  ||||||| ||  ||||||||||| ||| || ||||||||||||||||    
T  10422897 gctttcgcaccggtttccgacttaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcac 10422828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 323
Target Start/End: Original strand, 15238105 - 15238170
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgc 323  Q
    ||||||| || ||| ||| ||||||||||| ||||||||||||  || ||||| ||||||||||||    
T  15238105 gctttcgaaccggtttccaacccaccaaaggtgagcgactaatatgattcgtgcgtagaggcatgc 15238170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 327
Target Start/End: Complemental strand, 25165493 - 25165440
Alignment:
Q  274 ccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||||||||| |||| |||||||||| || |||  |||||||||||||||    
T  25165493 ccgacccaccaaaggtgagtgactaatccggcttgtgcctagaggcatgcgcac 25165440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 327
Target Start/End: Original strand, 32142845 - 32142914
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||||  ||| ||||||||| ||||| |||||||||||| || ||| || ||| ||||||||||||    
T  32142845 gctttcgcatcggtttccgacccatcaaaggtgagcgactaattcggctcatgcgtaaaggcatgcgcac 32142914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 327
Target Start/End: Original strand, 33418114 - 33418183
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||| || ||||| ||||||| ||||||| ||  ||||||||||| ||||||  |||||||||||||||    
T  33418114 gcttttgcgctggtttccgaccgaccaaaggtggacgactaatccggctcgtgcatagaggcatgcgcac 33418183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 197
Target Start/End: Original strand, 42694469 - 42694502
Alignment:
Q  164 gttaaatatgtttttctccctataaatatactaa 197  Q
    ||||||||||||||| ||||||||||||||||||    
T  42694469 gttaaatatgtttttgtccctataaatatactaa 42694502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 327
Target Start/End: Original strand, 45361881 - 45361950
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||||| ||| |||||||||| |||| ||| ||||||||||| ||  || |||| |||||||||||    
T  45361881 gctttcgcaccggtttccgacccactaaaggtgaacgactaatccggcttatgcgtagtggcatgcgcac 45361950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 327
Target Start/End: Original strand, 50503360 - 50503429
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||||  ||| ||||||||||||  | || ||||| |||||| |||||| ||||||||||||||||    
T  50503360 gctttcgcatcggtttccgacccaccattggtgggcgacaaatccggctcgtgcgtagaggcatgcgcac 50503429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 259 - 327
Target Start/End: Original strand, 33004015 - 33004083
Alignment:
Q  259 ctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||| ||| | ||||||||||  | || | |||||||||| |||||| ||||||||||||||||    
T  33004015 ctttcgcaccggttttcgacccaccattggtgggtgactaatccggctcgtgcgtagaggcatgcgcac 33004083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 3e-18; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 260 - 327
Target Start/End: Original strand, 3507534 - 3507601
Alignment:
Q  260 tttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||| ||| ||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||    
T  3507534 tttcgcaccggtttccgacccaccaaaggtgagcgactaatccggctcgtgcgtagaggcatgcgcac 3507601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 257 - 323
Target Start/End: Original strand, 7310701 - 7310767
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgc 323  Q
    ||||||||||  ||| ||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  7310701 ggctttcgcatcggtttccgacccaccaaagatgagcgactaatccggctcgtgcgtagaggcatgc 7310767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 257 - 323
Target Start/End: Original strand, 28572209 - 28572275
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgc 323  Q
    ||||||||||| ||| ||||||||||||||| || |||||||||||| |||||| ||||||||||||    
T  28572209 ggctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgc 28572275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 258 - 328
Target Start/End: Original strand, 50753340 - 50753410
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcaca 328  Q
    ||||| |||| ||| ||||||||||||| ||||| |||||||||||||||||| |||||||||||| ||||    
T  50753340 gcttttgcaccggtttccgacccaccaatgatgaacgactaatccgactcgtgcgtagaggcatgcacaca 50753410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 257 - 326
Target Start/End: Complemental strand, 13894035 - 13893966
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgca 326  Q
    ||||||||||| ||| | ||| ||||||||| || |||||||||||| ||||||||||||||||||||||    
T  13894035 ggctttcgcaccggttttcgatccaccaaaggtgggcgactaatccggctcgtgtgtagaggcatgcgca 13893966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 259 - 323
Target Start/End: Original strand, 30767247 - 30767311
Alignment:
Q  259 ctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgc 323  Q
    |||||||||| || ||||||||||||||| || |||||||||||| |||||| ||||||||||||    
T  30767247 ctttcgcactagtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgc 30767311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 264 - 327
Target Start/End: Original strand, 50405608 - 50405671
Alignment:
Q  264 gcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||| ||| ||||||||||||| | || ||||||||||||||||||| ||||||||||||||||    
T  50405608 gcaccggtttccgacccaccaatggtgggcgactaatccgactcgtgcgtagaggcatgcgcac 50405671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 260 - 327
Target Start/End: Original strand, 51682955 - 51683022
Alignment:
Q  260 tttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||||||| ||||||||||||  | || |||||||||||| |||||||| ||||||||||||||    
T  51682955 tttcgcactggtttccgacccaccattggtgggcgactaatccggctcgtgtggagaggcatgcgcac 51683022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 257 - 327
Target Start/End: Original strand, 3136692 - 3136762
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||||| ||| ||||||| ||||||| ||  ||||||||||||||| || ||||||||||||||||    
T  3136692 ggctttcgcaccggtttccgaccaaccaaaggtggacgactaatccgactcatgcgtagaggcatgcgcac 3136762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 257 - 323
Target Start/End: Complemental strand, 15320295 - 15320229
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgc 323  Q
    ||||||||||| ||| || |||||||||||| || |||||||||||| |||||| ||||||||||||    
T  15320295 ggctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgc 15320229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 257 - 327
Target Start/End: Complemental strand, 29128028 - 29127958
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||||  ||| ||||||||||||||| || |||||||||||| ||| || ||||||||||||||||    
T  29128028 ggctttcgcatcggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcac 29127958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 47164214 - 47164152
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggca 320  Q
    |||||| ||| ||| ||||| ||||||||||||||||||||||||| |||||| |||||||||    
T  47164214 gctttcacaccggtttccgatccaccaaagatgagcgactaatccggctcgtgcgtagaggca 47164152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 257 - 326
Target Start/End: Complemental strand, 44064653 - 44064584
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgca 326  Q
    |||||| |||| ||| ||||||||||||||| |||||||||||||||  || || |||||||||||||||    
T  44064653 ggcttttgcaccggtttccgacccaccaaaggtgagcgactaatccggttcatgcgtagaggcatgcgca 44064584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 327
Target Start/End: Original strand, 55069678 - 55069747
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||| |||| ||| ||||||||||||||| ||||||| ||||||| |||||| ||||||||||| ||||    
T  55069678 gcttttgcaccggtttccgacccaccaaaggtgagcgattaatccggctcgtgcgtagaggcatgtgcac 55069747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 259 - 327
Target Start/End: Complemental strand, 54261333 - 54261265
Alignment:
Q  259 ctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||| ||| |||||||||| |||| ||| ||||||||||| ||| || ||||||||||||||||    
T  54261333 ctttcgcaccggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcac 54261265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 276 - 327
Target Start/End: Original strand, 43330749 - 43330800
Alignment:
Q  276 gacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||||||| || |||||||||||| |||||| ||||||||||||||||    
T  43330749 gacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcac 43330800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 273 - 327
Target Start/End: Complemental strand, 8164646 - 8164592
Alignment:
Q  273 tccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||| ||||||||| || ||||||||||||||||||| ||| ||||||||||||    
T  8164646 tccgatccaccaaaggtgggcgactaatccgactcgtgcgtaaaggcatgcgcac 8164592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 327
Target Start/End: Original strand, 24506646 - 24506716
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||| |||| ||| ||||||||||||| | ||||||||||||| ||||| || ||||||||||| ||||    
T  24506646 ggcttttgcaccggtttccgacccaccaatggtgagcgactaatctgactcatgcgtagaggcatgtgcac 24506716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 327
Target Start/End: Complemental strand, 26043921 - 26043851
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||| | ||| || ||| |||||||| ||||||||||||||| ||| || ||||||||||||||||    
T  26043921 ggctttcgccccggtttctgactcaccaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcac 26043851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 323
Target Start/End: Original strand, 26361965 - 26362031
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgc 323  Q
    ||||||| ||| ||| ||||||||| ||||| || |||||||||||| |||||| ||||||||||||    
T  26361965 ggctttcacaccggtttccgacccatcaaaggtgtgcgactaatccggctcgtgcgtagaggcatgc 26362031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 327
Target Start/End: Original strand, 34374440 - 34374510
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||| ||| ||| |||||||||||||||| | |||||||||||||||  || || |||||||||||||    
T  34374440 ggctttcacaccggtttccgacccaccaaagaagggcgactaatccgacttatgcgttgaggcatgcgcac 34374510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 315
Target Start/End: Original strand, 36043672 - 36043730
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtag 315  Q
    ||||||||||| ||| ||||||||||||||| || |||||||||||| |||||| ||||    
T  36043672 ggctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtag 36043730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 273 - 327
Target Start/End: Original strand, 41630526 - 41630580
Alignment:
Q  273 tccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||| ||||||| || |||||||||||| ||| |||||||||||||||||||    
T  41630526 tccgaccaaccaaaggtgggcgactaatccggctcatgtgtagaggcatgcgcac 41630580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 327
Target Start/End: Complemental strand, 47219253 - 47219183
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||||| ||| ||||||||| ||||| ||  ||||||||||| ||| || ||||||||||||||||    
T  47219253 ggctttcgcaccggtttccgacccatcaaaggtggacgactaatccggctcatgcgtagaggcatgcgcac 47219183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 327
Target Start/End: Original strand, 47749103 - 47749173
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||||  ||| ||||||| ||||||| || ||||||||| || |||||| ||||||||||||||||    
T  47749103 ggctttcgcatcggtttccgacctaccaaaggtgggcgactaattcggctcgtgcgtagaggcatgcgcac 47749173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 327
Target Start/End: Original strand, 49021201 - 49021271
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||||| ||| ||||||||||||| | ||  ||||||||||| ||| || ||||||||||||||||    
T  49021201 ggctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcac 49021271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 258 - 327
Target Start/End: Complemental strand, 2668169 - 2668100
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||||||| | ||| |||||| |||| ||||||||||||||  ||| || ||||||||||||||||    
T  2668169 gctttcgcactgatttccaacccactaaaggtgagcgactaatccagctcttgcgtagaggcatgcgcac 2668100  T

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Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 258 - 327
Target Start/End: Complemental strand, 10043790 - 10043721
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||||| ||| ||||||||||||| | ||||||| ||||| | |||||| ||||||||||| ||||    
T  10043790 gctttcgcaccggtttccgacccaccaatggtgagcgattaatctgcctcgtgcgtagaggcatgtgcac 10043721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 317
Target Start/End: Complemental strand, 7650335 - 7650276
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagag 317  Q
    |||||||||| ||| ||| ||||||||||| || |||||||||||| |||||| ||||||    
T  7650335 gctttcgcaccggtttccaacccaccaaaggtgggcgactaatccggctcgtgcgtagag 7650276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 273 - 328
Target Start/End: Original strand, 45402365 - 45402420
Alignment:
Q  273 tccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcaca 328  Q
    |||||||||| |||| ||| ||||||||||| ||| || |||||||||||||||||    
T  45402365 tccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcaca 45402420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 327
Target Start/End: Complemental strand, 7328951 - 7328883
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||||| ||| | ||||||||||||| || |||||||||||| ||| || ||| ||||||||||||    
T  7328951 gctttcgcaccggttttcgacccaccaaaggtgggcgactaatccggctcatgcgta-aggcatgcgcac 7328883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 327
Target Start/End: Complemental strand, 7648848 - 7648779
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||| |||  | ||||||| ||||| || |||||||||||| |||||| ||||||| ||||||||    
T  7648848 gctttcgcattggatttcgacccaacaaaggtgggcgactaatccggctcgtgcgtagaggtatgcgcac 7648779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 327
Target Start/End: Complemental strand, 23511675 - 23511606
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||||| ||| | ||||||| ||||| ||  ||| ||||||||||| || ||||||||||||||||    
T  23511675 gctttcgcaccggttttcgacccatcaaaggtggacgattaatccgactcatgcgtagaggcatgcgcac 23511606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 327
Target Start/End: Complemental strand, 30045929 - 30045860
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||||| || | ||||||| ||||| ||  ||||||||| |||||||| |||||| |||||||||    
T  30045929 gctttcgcactagtttacgacccatcaaaggtggacgactaatcagactcgtgcgtagagacatgcgcac 30045860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 259 - 327
Target Start/End: Complemental strand, 35316063 - 35315995
Alignment:
Q  259 ctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||  ||| ||||||||||||||  || |||||||||||  ||| || ||||||||||||||||    
T  35316063 ctttcgcatcggtttccgacccaccaaaagtgggcgactaatccagctcatgcgtagaggcatgcgcac 35315995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 259 - 327
Target Start/End: Complemental strand, 45877561 - 45877493
Alignment:
Q  259 ctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||| ||| ||||||||| ||| | ||| ||||||||||| ||| || ||||||||||| ||||    
T  45877561 ctttcgcaccggtttccgacccatcaatggtgaacgactaatccggctcatgcgtagaggcatgtgcac 45877493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 1e-17; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 257 - 327
Target Start/End: Original strand, 9633622 - 9633692
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||||| ||| ||||||||||||||| || |||||||||||| |||||| ||||||||||||||||    
T  9633622 ggctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcac 9633692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 257 - 327
Target Start/End: Original strand, 30788850 - 30788920
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||||| ||| ||||||||||||||| || |||||||||||| ||||||  |||||||||||||||    
T  30788850 ggctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcctagaggcatgcgcac 30788920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 258 - 327
Target Start/End: Complemental strand, 3601196 - 3601127
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||||| ||| ||||||||||||||| ||  ||||||||||| |||||||||| ||||||||||||    
T  3601196 gctttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcgtgtgtataggcatgcgcac 3601127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 257 - 327
Target Start/End: Complemental strand, 5029930 - 5029860
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||||||  || ||||||||| |||||||| ||||||||||| |||| || ||||||||||||||||    
T  5029930 ggctttcgcaccagtttccgacccatcaaagatgggcgactaatccaactcatgcgtagaggcatgcgcac 5029860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 257 - 327
Target Start/End: Complemental strand, 21898761 - 21898691
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||||| ||| |||||||||| |||| ||| ||||||||||| ||| || ||||||||||||||||    
T  21898761 ggctttcgcaccggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcac 21898691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 257 - 327
Target Start/End: Original strand, 29444762 - 29444832
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||||||| || ||||||||||||||||||  | ||||||||| ||| || ||||||||||||||||    
T  29444762 ggctttcgcactagtttccgacccaccaaagatggacaactaatccggctcatgcgtagaggcatgcgcac 29444832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 327
Target Start/End: Original strand, 5253221 - 5253290
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||||| ||| ||||||||||||||| || |||| ||||||| ||| || ||||||||||||||||    
T  5253221 gctttcgcaccggtttccgacccaccaaaggtgggcgattaatccggctcatgcgtagaggcatgcgcac 5253290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 273 - 322
Target Start/End: Complemental strand, 14326094 - 14326045
Alignment:
Q  273 tccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatg 322  Q
    ||||||||||||||||||||||||||||||| ||| || |||||||||||    
T  14326094 tccgacccaccaaagatgagcgactaatccggctcatgcgtagaggcatg 14326045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 273 - 322
Target Start/End: Complemental strand, 14419104 - 14419055
Alignment:
Q  273 tccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatg 322  Q
    ||||||||||||||||||||||||||||||| ||| || |||||||||||    
T  14419104 tccgacccaccaaagatgagcgactaatccggctcatgcgtagaggcatg 14419055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 327
Target Start/End: Complemental strand, 30410557 - 30410488
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||||  ||| ||||||||||||||||||||||| ||||||  ||| || ||||||||||||||||    
T  30410557 gctttcgcatcggtttccgacccaccaaagatgagcgattaatccagctcatgcgtagaggcatgcgcac 30410488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 327
Target Start/End: Complemental strand, 12606543 - 12606473
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||||| ||| |||  | |||||||| || |||||||||||| |||||| ||||||||||||||||    
T  12606543 ggctttcgcaccggtttccagctcaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcac 12606473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 327
Target Start/End: Complemental strand, 12635927 - 12635857
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||||| ||| |||||||||||||   || |||||||||||| || ||| ||||||||||||||||    
T  12635927 ggctttcgcaccggtttccgacccaccaatagtgggcgactaatccggcttgtgcgtagaggcatgcgcac 12635857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 323
Target Start/End: Complemental strand, 19089611 - 19089545
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgc 323  Q
    ||||||||||| ||| ||||||||||||||| |   ||||||||||| |||||| ||||||||||||    
T  19089611 ggctttcgcaccggtttccgacccaccaaaggtagacgactaatccggctcgtgcgtagaggcatgc 19089545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 327
Target Start/End: Complemental strand, 11142713 - 11142646
Alignment:
Q  260 tttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||| ||| ||||||||||||||| ||  | ||||||| ||||| || ||||||||||||||||    
T  11142713 tttcgcaccggtctccgacccaccaaagttggacaactaatctgactcatgcgtagaggcatgcgcac 11142646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 283 - 326
Target Start/End: Complemental strand, 33940098 - 33940055
Alignment:
Q  283 caaagatgagcgactaatccgactcgtgtgtagaggcatgcgca 326  Q
    ||||||||  ||||||||||| ||||||||||||||||||||||    
T  33940098 caaagatggacgactaatccggctcgtgtgtagaggcatgcgca 33940055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 327
Target Start/End: Complemental strand, 8932774 - 8932704
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||||| ||| ||||||||| ||||| || | || ||||||| ||| || ||||||||||||||||    
T  8932774 ggctttcgcaccggtttccgacccatcaaaggtgggtgattaatccggctcatgcgtagaggcatgcgcac 8932704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 327
Target Start/End: Complemental strand, 8944240 - 8944170
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||||| ||| ||||||||| ||||| || | || ||||||| ||| || ||||||||||||||||    
T  8944240 ggctttcgcaccggtttccgacccatcaaaggtgggtgattaatccggctcatgcgtagaggcatgcgcac 8944170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 327
Target Start/End: Complemental strand, 13469046 - 13468976
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||||| ||| ||| ||||||||| | || |||||||||| | |||||| ||||||||||| ||||    
T  13469046 ggctttcgcaccggtttccaacccaccaatggtgggcgactaatctggctcgtgcgtagaggcatgtgcac 13468976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 327
Target Start/End: Original strand, 14107355 - 14107425
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||||| ||| |||||||||| ||  ||| |||||||||||| ||| || ||||||||||| ||||    
T  14107355 ggctttcgcaccggtttccgacccactaataatgggcgactaatccggctcatgcgtagaggcatgtgcac 14107425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 323
Target Start/End: Original strand, 14783417 - 14783483
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgc 323  Q
    ||||||||||| ||| ||||||||||||| | ||  ||||||||||| ||| || ||||||||||||    
T  14783417 ggctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgc 14783483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 323
Target Start/End: Original strand, 19230576 - 19230622
Alignment:
Q  277 acccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgc 323  Q
    ||||||||| ||||| ||||||||||| |||||| ||||||||||||    
T  19230576 acccaccaatgatgaacgactaatccggctcgtgcgtagaggcatgc 19230622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 310
Target Start/End: Original strand, 3030656 - 3030693
Alignment:
Q  273 tccgacccaccaaagatgagcgactaatccgactcgtg 310  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  3030656 tccgacccaccaaatgtgagcgactaatccgactcgtg 3030693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 322
Target Start/End: Original strand, 6606094 - 6606159
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatg 322  Q
    ||||||||||| ||| ||||||||||||| | ||  ||||||||||| ||| || |||||||||||    
T  6606094 ggctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatg 6606159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 327
Target Start/End: Original strand, 10311467 - 10311536
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||||  || | ||||||||||| | |||||||||||||  ||||||| |||||| |||||||||    
T  10311467 gctttcgcaccagttttcgacccaccaatggtgagcgactaatctaactcgtgcgtagagacatgcgcac 10311536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 257 - 305
Target Start/End: Original strand, 13116127 - 13116175
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgac 305  Q
    ||||||||||| ||| |||||||||||||| |||| ||| |||||||||    
T  13116127 ggctttcgcaccggtttccgacccaccaaaaatgaacgattaatccgac 13116175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 13391381 - 13391329
Alignment:
Q  275 cgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||  ||| ||| |||||||||||| |||||| ||||||||||||||||    
T  13391381 cgacccattaaatatgggcgactaatccggctcgtgcgtagaggcatgcgcac 13391329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 1e-17; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 257 - 327
Target Start/End: Complemental strand, 12455419 - 12455349
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||||| ||| ||||||||||||| | ||||||||||||||| |||||| ||||||||||||||||    
T  12455419 ggctttcgcaccggtttccgacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatgcgcac 12455349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 257 - 327
Target Start/End: Complemental strand, 10823169 - 10823099
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||||| ||| |||||||||| |||| || |||||||||||| |||||| ||||||||||||||||    
T  10823169 ggctttcgcaccggtttccgacccacaaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcac 10823099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 258 - 327
Target Start/End: Original strand, 25540402 - 25540471
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||||| ||| ||||||||||||||| ||  ||||||||||| |||||| ||||||||||||||||    
T  25540402 gctttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcac 25540471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 258 - 323
Target Start/End: Original strand, 41031904 - 41031969
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgc 323  Q
    |||||||||||||| ||||||||||||||| || | |||||||||| |||||| ||||||||||||    
T  41031904 gctttcgcactggtttccgacccaccaaaggtgggtgactaatccggctcgtgcgtagaggcatgc 41031969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 45263682 - 45263734
Alignment:
Q  275 cgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||||||||||||||| ||||||| |||||| ||||||||||||||||    
T  45263682 cgacccaccaaagatgagcgattaatccggctcgtgcgtagaggcatgcgcac 45263734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 257 - 327
Target Start/End: Complemental strand, 8410240 - 8410170
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||||| ||| |||||||| |||||  || |||||||||||| |||||| ||||||||||||||||    
T  8410240 ggctttcgcaccggtttccgaccccccaaaagtgggcgactaatccggctcgtgcgtagaggcatgcgcac 8410170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 257 - 323
Target Start/End: Original strand, 34346284 - 34346350
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgc 323  Q
    ||||||||||| ||| ||||||||||||||| ||||||| ||||| ||||| || ||||||||||||    
T  34346284 ggctttcgcaccggtttccgacccaccaaaggtgagcgattaatctgactcatgcgtagaggcatgc 34346350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 257 - 327
Target Start/End: Complemental strand, 38005511 - 38005441
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||||||  || ||||| ||||||||| || |||||||||||| ||| |||||||||||||||||||    
T  38005511 ggctttcgcaccagtttccgatccaccaaaggtgggcgactaatccggctcatgtgtagaggcatgcgcac 38005441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 257 - 327
Target Start/End: Complemental strand, 44945702 - 44945632
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||||| ||| ||||| |||| |||| || |||||||||||| |||||| ||||||||||||||||    
T  44945702 ggctttcgcaccggtttccgatccactaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcac 44945632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 327
Target Start/End: Original strand, 28616377 - 28616446
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||||| ||| || ||||||| ||||||| |||||||||| | |||||| ||||||||||||||||    
T  28616377 gctttcgcaccggtttctgacccactaaagatgggcgactaatctggctcgtgcgtagaggcatgcgcac 28616446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 259 - 327
Target Start/End: Original strand, 18649025 - 18649093
Alignment:
Q  259 ctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||  ||| ||| ||||||||||  ||||||||||||||||||| || ||||||||||||||||    
T  18649025 ctttcgcaacggtttccaacccaccaaaagtgagcgactaatccgactcatgcgtagaggcatgcgcac 18649093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 327
Target Start/End: Complemental strand, 10669694 - 10669631
Alignment:
Q  264 gcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||| ||| ||||||||||||||| ||| ||| |||||||||||||| |||||| |||||||||    
T  10669694 gcaccggtttccgacccaccaaaggtgaacgattaatccgactcgtgcgtagagacatgcgcac 10669631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 323
Target Start/End: Original strand, 2528338 - 2528404
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgc 323  Q
    |||||||||||  || |||||| ||| |||||||||||||||||||| ||  |||||||||||||||    
T  2528338 ggctttcgcaccagtttccgactcactaaagatgagcgactaatccggcttatgtgtagaggcatgc 2528404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 323
Target Start/End: Complemental strand, 7747383 - 7747317
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgc 323  Q
    ||||||||||| ||| |||||||||| |||| ||| ||||||||||| ||| || ||||||||||||    
T  7747383 ggctttcgcaccggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgc 7747317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 327
Target Start/End: Complemental strand, 22593242 - 22593173
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||||| ||| ||||||||||||||| ||  ||||||||||| ||| || ||||||||||||||||    
T  22593242 ggctttcgcaccggt-tccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcac 22593173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 327
Target Start/End: Complemental strand, 41220744 - 41220674
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||||| ||| |||||||||| |||| ||| |||||||| || ||| || ||||||||||||||||    
T  41220744 ggctttcgcaccggtttccgacccactaaaggtgaacgactaattcggctcatgcgtagaggcatgcgcac 41220674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 279 - 324
Target Start/End: Complemental strand, 7787143 - 7787098
Alignment:
Q  279 ccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcg 324  Q
    |||||||||||| |||||||||||| |||||| |||||||||||||    
T  7787143 ccaccaaagatgggcgactaatccggctcgtgcgtagaggcatgcg 7787098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 258 - 327
Target Start/End: Original strand, 10026614 - 10026683
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||| |||| || ||||||||||||||| ||  ||||||||||| ||| || ||||||||||||||||    
T  10026614 gctttcacactagtttccgacccaccaaaggtggtcgactaatccggctcatgcgtagaggcatgcgcac 10026683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 258 - 327
Target Start/End: Original strand, 18902528 - 18902597
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||||| ||| ||||||||||||||| || |||||||||| | |||||| |||||| || ||||||    
T  18902528 gctttcgcaccggtttccgacccaccaaaggtgggcgactaatctggctcgtgcgtagagacacgcgcac 18902597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 294 - 327
Target Start/End: Original strand, 39806919 - 39806952
Alignment:
Q  294 gactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||||||||||||||||||||||||||||    
T  39806919 gactaatccgactcgtgtgtagaggcatgcgcac 39806952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 258 - 327
Target Start/End: Complemental strand, 44139592 - 44139523
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||||| ||| ||||||||||||  | || |||||||||||| |||||| ||||||||| ||||||    
T  44139592 gctttcgcaccggtttccgacccaccattggtgggcgactaatccggctcgtgcgtagaggcacgcgcac 44139523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 259 - 327
Target Start/End: Original strand, 9360747 - 9360815
Alignment:
Q  259 ctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||| ||| |||| ||||| |||| || ||||||||| || |||||| ||||||||||||||||    
T  9360747 ctttcgcaccggtttccggcccactaaaggtgggcgactaattcggctcgtgcgtagaggcatgcgcac 9360815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 259 - 327
Target Start/End: Complemental strand, 21286551 - 21286483
Alignment:
Q  259 ctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||| |||| ||| ||| ||||||||| |||||| |||||||||  |||||| ||||||||||||||||    
T  21286551 cttttgcaccggtttccaacccaccaatgatgagtgactaatccagctcgtgcgtagaggcatgcgcac 21286483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 327
Target Start/End: Original strand, 10046477 - 10046544
Alignment:
Q  260 tttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||| |||| || ||||||||||||||| ||  ||||||||||| ||| || ||||||||||||||||    
T  10046477 tttcacactagtttccgacccaccaaaggtggtcgactaatccggctcatgcgtagaggcatgcgcac 10046544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 327
Target Start/End: Complemental strand, 331610 - 331540
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||  |||||| ||| ||||||||||| || |||||||||||| ||| || ||||| ||||||||||    
T  331610 ggctttcatactggtttccaacccaccaaaggtgggcgactaatccggctcatgcgtagaagcatgcgcac 331540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 275 - 325
Target Start/End: Original strand, 3848929 - 3848979
Alignment:
Q  275 cgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgc 325  Q
    ||||||| ||||| ||| |||||||||||||||||| |||||| |||||||    
T  3848929 cgacccatcaaaggtgaacgactaatccgactcgtgcgtagagacatgcgc 3848979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 327
Target Start/End: Original strand, 15234058 - 15234128
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||||  ||| ||||||| | ||||||||| |||||||||  ||| ||| ||||||||||||||||    
T  15234058 ggctttcgcatcggtttccgacctatcaaagatgaacgactaatctaacttgtgcgtagaggcatgcgcac 15234128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 284 - 326
Target Start/End: Complemental strand, 20533200 - 20533158
Alignment:
Q  284 aaagatgagcgactaatccgactcgtgtgtagaggcatgcgca 326  Q
    |||||||||||| |||||||||||||  |||||||||||||||    
T  20533200 aaagatgagcgattaatccgactcgtacgtagaggcatgcgca 20533158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 273 - 323
Target Start/End: Original strand, 39201521 - 39201571
Alignment:
Q  273 tccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgc 323  Q
    ||||||||||||||| ||| ||||||||||| ||| || ||||||||||||    
T  39201521 tccgacccaccaaaggtgaacgactaatccggctcatgcgtagaggcatgc 39201571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 326
Target Start/End: Original strand, 3811688 - 3811757
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgca 326  Q
    ||||||||||  ||| || |||||||||||| || |||| ||||||| ||| || |||||||||||||||    
T  3811688 ggctttcgcatcggtttctgacccaccaaaggtgggcgagtaatccggctcatgcgtagaggcatgcgca 3811757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 324
Target Start/End: Original strand, 16813164 - 16813229
Alignment:
Q  259 ctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcg 324  Q
    ||||||||||| | ||| ||| ||||||||||  ||||||||||| ||||||  ||||||||||||    
T  16813164 ctttcgcactgatttccaacctaccaaagatggacgactaatccggctcgtgcatagaggcatgcg 16813229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 324
Target Start/End: Original strand, 16852443 - 16852508
Alignment:
Q  259 ctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcg 324  Q
    ||||||||||| | ||| ||| ||||||||||  ||||||||||| ||||||  ||||||||||||    
T  16852443 ctttcgcactgatttccaacctaccaaagatggacgactaatccggctcgtgcatagaggcatgcg 16852508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 326
Target Start/End: Original strand, 20116609 - 20116678
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgca 326  Q
    ||||||||||| ||| ||||||||| ||||| ||  || |||||||| ||| || |||||||||||||||    
T  20116609 ggctttcgcaccggtttccgacccatcaaaggtggacggctaatccggctcatgcgtagaggcatgcgca 20116678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 259 - 303
Target Start/End: Complemental strand, 792261 - 792217
Alignment:
Q  259 ctttcgcactggtgtccgacccaccaaagatgagcgactaatccg 303  Q
    |||| |||| ||| |||||||||||||||||| ||||||||||||    
T  792261 cttttgcaccggtttccgacccaccaaagatgggcgactaatccg 792217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 279 - 327
Target Start/End: Complemental strand, 26805383 - 26805335
Alignment:
Q  279 ccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||| || |||||||||||||||| || ||||||||||| ||||    
T  26805383 ccaccaaaggtgggcgactaatccgactcatgcgtagaggcatgtgcac 26805335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 259 - 327
Target Start/End: Complemental strand, 27726047 - 27725979
Alignment:
Q  259 ctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||| ||| ||| ||||||||||||  | || |||||||||||| || ||| ||||||||||||||||    
T  27726047 ctttcacaccggtttccgacccaccattggtgggcgactaatccggctagtgcgtagaggcatgcgcac 27725979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 259 - 327
Target Start/End: Complemental strand, 33005858 - 33005790
Alignment:
Q  259 ctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||  ||| |||||||||| |||| ||||||| ||||| | ||| || ||||||||||||||||    
T  33005858 ctttcgcatcggtttccgacccactaaaggtgagcgattaatctgcctcatgcgtagaggcatgcgcac 33005790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 259 - 323
Target Start/End: Complemental strand, 35946845 - 35946781
Alignment:
Q  259 ctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgc 323  Q
    |||||||||  || ||||||||||||| | ||  ||||||||||| |||||| ||||||||||||    
T  35946845 ctttcgcaccagtttccgacccaccaatggtggacgactaatccggctcgtgcgtagaggcatgc 35946781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 287 - 327
Target Start/End: Complemental strand, 41187928 - 41187888
Alignment:
Q  287 gatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||||||||||| ||| || ||||||||||||||||    
T  41187928 gatgagcgactaatccgtctcatgcgtagaggcatgcgcac 41187888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 259 - 303
Target Start/End: Complemental strand, 44773370 - 44773326
Alignment:
Q  259 ctttcgcactggtgtccgacccaccaaagatgagcgactaatccg 303  Q
    ||||||||| ||| ||||||||| ||||| |||||||||||||||    
T  44773370 ctttcgcaccggtttccgacccatcaaaggtgagcgactaatccg 44773326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 258 - 327
Target Start/End: Complemental strand, 6966 - 6897
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||||| ||| ||||||||||||||| ||||||||||||||| ||| || ||||||||||||||||    
T  6966 gctttcgcaccggtttccgacccaccaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcac 6897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 5e-17; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 258 - 327
Target Start/End: Complemental strand, 43033013 - 43032944
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||||| ||| || |||||||||||| || |||||||||||| |||||||||||||||||||||||    
T  43033013 gctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggctcgtgtgtagaggcatgcgcac 43032944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 260 - 327
Target Start/End: Original strand, 15884556 - 15884623
Alignment:
Q  260 tttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||| ||| ||||||||||||||| || |||||||||||| |||||| ||||||||||||||||    
T  15884556 tttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcac 15884623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 258 - 327
Target Start/End: Complemental strand, 45521280 - 45521211
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||||| ||| ||||||||| ||||| ||||||||||||||| ||| || ||||||||||||||||    
T  45521280 gctttcgcaccggtttccgacccatcaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcac 45521211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 323
Target Start/End: Complemental strand, 2964189 - 2964123
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgc 323  Q
    ||||||||||| ||| || |||||||||||| || ||||||||||||  ||||| ||||||||||||    
T  2964189 ggctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggttcgtgcgtagaggcatgc 2964123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 324
Target Start/End: Original strand, 8997542 - 8997608
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcg 324  Q
    |||||||||| ||| ||||||||||||||||||| ||||||||| | ||| || ||| |||||||||    
T  8997542 gctttcgcaccggtttccgacccaccaaagatgaacgactaatctggctcatgcgtataggcatgcg 8997608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 327
Target Start/End: Complemental strand, 10927719 - 10927649
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||||  ||| |||||||||| |||| ||| ||||||||||| ||| || ||||||||||||||||    
T  10927719 ggctttcgcatcggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcac 10927649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 258 - 323
Target Start/End: Complemental strand, 17981553 - 17981488
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgc 323  Q
    |||||||||| ||| |||||| |||||||| || || |||||| ||||||||| ||||||||||||    
T  17981553 gctttcgcaccggtttccgactcaccaaagctgggcaactaattcgactcgtgcgtagaggcatgc 17981488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 258 - 327
Target Start/End: Original strand, 34710565 - 34710634
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||| |||||| | ||||||||||| ||||  |||||| ||||||| ||||||| ||||||||||||    
T  34710565 gctttcggactggttttcgacccaccaatgatggacgactagtccgacttgtgtgtaaaggcatgcgcac 34710634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 258 - 327
Target Start/End: Original strand, 39969913 - 39969982
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||||  ||| ||||| ||| ||| |||| |||||||||| ||||| |||||||||||||||||||    
T  39969913 gctttcgcatcggtttccgatccatcaatgatgggcgactaatctgactcatgtgtagaggcatgcgcac 39969982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 258 - 326
Target Start/End: Complemental strand, 43027417 - 43027349
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgca 326  Q
    |||||||||  ||| ||||||||| ||||||||  ||||||||||| ||| || |||||||||||||||    
T  43027417 gctttcgcatcggtttccgacccatcaaagatggacgactaatccggctcatgcgtagaggcatgcgca 43027349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 327
Target Start/End: Original strand, 4479296 - 4479363
Alignment:
Q  260 tttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||| ||| ||||||||||||||| ||  ||||||||||  ||| || ||||||||||||||||    
T  4479296 tttcgcaccggtttccgacccaccaaaggtggacgactaatccagctcatgcgtagaggcatgcgcac 4479363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 324
Target Start/End: Original strand, 22212512 - 22212579
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcg 324  Q
    ||||||||||| ||| | ||| ||||||||| ||||||||||||||| | |||| ||||| |||||||    
T  22212512 ggctttcgcaccggttttcgaaccaccaaaggtgagcgactaatccggcccgtgcgtagaagcatgcg 22212579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 327
Target Start/End: Complemental strand, 583925 - 583855
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||||| ||| ||  | ||| ||||| || |||||||||||||||| || ||||||||||||||||    
T  583925 ggctttcgcaccggtttctaatccatcaaaggtgggcgactaatccgactcatgcgtagaggcatgcgcac 583855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 327
Target Start/End: Complemental strand, 8803167 - 8803097
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||||  ||| ||||||||||||  |||| |||||||||||| |||||| |||||||  |||||||    
T  8803167 ggctttcgcatcggtttccgacccaccattgatgggcgactaatccggctcgtgcgtagaggtctgcgcac 8803097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 327
Target Start/End: Original strand, 11298264 - 11298334
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||||| ||| ||||||||||||||| ||||||| ||||  | ||| ||  |||||||||||||||    
T  11298264 ggctttcgcaccggtttccgacccaccaaaggtgagcgattaatttggctcatgcatagaggcatgcgcac 11298334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 273 - 327
Target Start/End: Complemental strand, 12754122 - 12754068
Alignment:
Q  273 tccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||| ||| ||||||||||||||||||| |||| |||  |||||||||||||||    
T  12754122 tccgatccatcaaagatgagcgactaatctgacttgtgcatagaggcatgcgcac 12754068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 327
Target Start/End: Complemental strand, 14846688 - 14846618
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||||| | | ||||||||||||||| ||  ||||| ||| ||||| || ||||||||||||||||    
T  14846688 ggctttcgcaccgatttccgacccaccaaaggtggacgacttatctgactcatgcgtagaggcatgcgcac 14846618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 281 - 326
Target Start/End: Original strand, 13831035 - 13831080
Alignment:
Q  281 accaaagatgagcgactaatccgactcgtgtgtagaggcatgcgca 326  Q
    |||||||||| | |||||||||||||  ||||||||||||||||||    
T  13831035 accaaagatgggtgactaatccgacttatgtgtagaggcatgcgca 13831080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 18374105 - 18374053
Alignment:
Q  275 cgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||||||| ||  ||||||||||| ||| || ||||||||||||||||    
T  18374105 cgacccaccaaagttggacgactaatccggctcatgcgtagaggcatgcgcac 18374053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 164 - 212
Target Start/End: Complemental strand, 33129303 - 33129255
Alignment:
Q  164 gttaaatatgtttttctccctataaatatactaacatttgtttttagtc 212  Q
    ||||||||||||||| ||||||||||||||| ||| |||  ||||||||    
T  33129303 gttaaatatgtttttgtccctataaatataccaactttttgttttagtc 33129255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 259 - 323
Target Start/End: Original strand, 44893277 - 44893341
Alignment:
Q  259 ctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgc 323  Q
    |||| |||| ||| ||||||||| ||| | ||||||| ||||||| |||||| ||||||||||||    
T  44893277 cttttgcaccggtttccgacccatcaagggtgagcgattaatccggctcgtgcgtagaggcatgc 44893341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 5e-17; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 258 - 327
Target Start/End: Complemental strand, 47078571 - 47078502
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||||||||| ||||||||||||| | ||||||||||||||| |||||| ||||||||||| ||||    
T  47078571 gctttcgcactggtttccgacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatgtgcac 47078502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 259 - 327
Target Start/End: Complemental strand, 14124128 - 14124060
Alignment:
Q  259 ctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||| ||| ||| ||||||||| | ||||||||||||||| |||||||||||||||||||||||    
T  14124128 ctttcgcaccggtttccaacccaccaatggtgagcgactaatccggctcgtgtgtagaggcatgcgcac 14124060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 257 - 327
Target Start/End: Original strand, 36262764 - 36262834
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||||| |||| || |||||||||||| || ||||||||||||||||||| ||||||||||| ||||    
T  36262764 ggctttcgcattggtttctgacccaccaaaggtgggcgactaatccgactcgtgcgtagaggcatgtgcac 36262834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 258 - 327
Target Start/End: Complemental strand, 38166140 - 38166071
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||||| ||| ||||||||||||||| || |||||||||||| |||||| |||||| |||||||||    
T  38166140 gctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagagccatgcgcac 38166071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 259 - 327
Target Start/End: Original strand, 7246645 - 7246713
Alignment:
Q  259 ctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||| ||| ||||||||||||||| || |||||||||||| ||| || ||||||||||||||||    
T  7246645 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcac 7246713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 259 - 327
Target Start/End: Complemental strand, 14567351 - 14567283
Alignment:
Q  259 ctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||| | | |||||||||||||||  |||||||||||||| |||||| ||||||||||||||||    
T  14567351 ctttcgcaccgatttccgacccaccaaaggcgagcgactaatccggctcgtgcgtagaggcatgcgcac 14567283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 257 - 327
Target Start/End: Original strand, 1940774 - 1940844
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||| |||||| ||| | ||||||||||||| || |||||||||||| |||||| ||||||||||||||||    
T  1940774 ggctatcgcaccggttttcgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcac 1940844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 327
Target Start/End: Original strand, 3159467 - 3159536
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||| |||| ||| ||||||||||||| | ||||||||||||| | |||||| ||||||||||||||||    
T  3159467 gcttttgcaccggtttccgacccaccaatggtgagcgactaatctggctcgtgcgtagaggcatgcgcac 3159536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 327
Target Start/End: Original strand, 5472846 - 5472915
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||||  || | ||||||||||||| || |||||||||||| |||||| ||||||||||||||||    
T  5472846 gctttcgcaccagttttcgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcac 5472915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 323
Target Start/End: Complemental strand, 16645231 - 16645166
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgc 323  Q
    |||||||||| ||| |||||||||||| || || |||||||||| ||||| |||||||||||||||    
T  16645231 gctttcgcaccggtttccgacccaccacaggtgggcgactaatcagactcatgtgtagaggcatgc 16645166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 327
Target Start/End: Original strand, 48834698 - 48834767
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||||| ||| ||||||||||||||| |  |||||||||||||||| ||| |||||||||| ||||    
T  48834698 gctttcgcaccggtttccgacccaccaaaggtaggcgactaatccgactcatgtatagaggcatgtgcac 48834767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 327
Target Start/End: Complemental strand, 55921147 - 55921078
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||||| ||| ||||||||||||||| ||||||| ||||||| ||| |  ||||||||||||||||    
T  55921147 gctttcgcaccggtttccgacccaccaaaggtgagcgattaatccggctcatacgtagaggcatgcgcac 55921078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 280 - 327
Target Start/End: Original strand, 3574466 - 3574513
Alignment:
Q  280 caccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||| ||| |||||||||||||||||||||| ||||||||||||||||    
T  3574466 cacctaaggtgagcgactaatccgactcgtgcgtagaggcatgcgcac 3574513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 260 - 327
Target Start/End: Original strand, 40780861 - 40780928
Alignment:
Q  260 tttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||| ||| ||||||||||||||| ||  ||||||||||| ||| || ||||||||||||||||    
T  40780861 tttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcac 40780928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 327
Target Start/End: Complemental strand, 21192754 - 21192684
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||||| ||| | |||| |||||||  || |||| |||||||||||||| ||||||||||||||||    
T  21192754 ggctttcgcaccggttttcgactcaccaaatgtgggcgattaatccgactcgtgcgtagaggcatgcgcac 21192684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 327
Target Start/End: Complemental strand, 21429411 - 21429345
Alignment:
Q  261 ttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||| ||| ||||||||||||||| ||  |||||| || |||||||| ||||||||||||||||    
T  21429411 ttcgcaccggtttccgacccaccaaaggtggacgactagtctgactcgtgcgtagaggcatgcgcac 21429345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 273 - 327
Target Start/End: Original strand, 49260678 - 49260732
Alignment:
Q  273 tccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||||||||| ||  ||||||||||| |||||| ||||||||||||||||    
T  49260678 tccgacccaccaaaggtggtcgactaatccggctcgtgcgtagaggcatgcgcac 49260732  T

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Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 258 - 327
Target Start/End: Original strand, 15732446 - 15732515
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||||| ||| ||||| |||||||||||||||||||||||   | |||| ||||||||||| ||||    
T  15732446 gctttcgcaccggtttccgatccaccaaagatgagcgactaatctagcccgtgcgtagaggcatgtgcac 15732515  T

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Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 258 - 327
Target Start/End: Original strand, 47682380 - 47682449
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||||| ||| ||||||||||||||| || |||||||| ||| |||||| |||||| |||| ||||    
T  47682380 gctttcgcaccggtttccgacccaccaaaggtgggcgactaacccggctcgtgcgtagagacatgtgcac 47682449  T

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Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 259 - 327
Target Start/End: Complemental strand, 2559419 - 2559351
Alignment:
Q  259 ctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||| ||| ||||||||||||||| ||  ||| ||||||| || ||| ||||||||||||||||    
T  2559419 ctttcgcaccggtttccgacccaccaaaggtggacgagtaatccggcttgtgcgtagaggcatgcgcac 2559351  T

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Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 263 - 327
Target Start/End: Complemental strand, 3507378 - 3507314
Alignment:
Q  263 cgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||| || ||||| ||||||||| ||  ||||||||||| |||||||||||||||| ||||||    
T  3507378 cgcactagtttccgatccaccaaaggtggacgactaatccggctcgtgtgtagaggcacgcgcac 3507314  T

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Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 259 - 327
Target Start/End: Original strand, 15839934 - 15840002
Alignment:
Q  259 ctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||||||| ||| ||| | |||||| | |||||||||||| ||| || ||||||||||||||||    
T  15839934 ctttcgcactggtttccaacctatcaaagaagggcgactaatccggctcatgcgtagaggcatgcgcac 15840002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 259 - 327
Target Start/End: Original strand, 42722576 - 42722644
Alignment:
Q  259 ctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||| ||| | |||||||| |||| ||| ||||||||||| ||| || ||||||||||||||||    
T  42722576 ctttcgcaccggttttcgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcac 42722644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 327
Target Start/End: Original strand, 48352509 - 48352576
Alignment:
Q  260 tttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||||||| |||||| || ||||||||  ||||||||||| ||||||||  |||||||| ||||    
T  48352509 tttcgcactggtctccgactcatcaaagatggacgactaatccggctcgtgtgaggaggcatgtgcac 48352576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 273 - 324
Target Start/End: Complemental strand, 54946347 - 54946296
Alignment:
Q  273 tccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcg 324  Q
    ||||||||||||| |||| |||||||||||| ||| || |||||||||||||    
T  54946347 tccgacccaccaatgatgggcgactaatccggctcatgcgtagaggcatgcg 54946296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 327
Target Start/End: Original strand, 36145212 - 36145282
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||||| ||| |||||  || ||||| ||  ||||||||||| ||| |||||||||||||||||||    
T  36145212 ggctttcgcaccggtttccgattcatcaaaggtggacgactaatccggctcatgtgtagaggcatgcgcac 36145282  T

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Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 273 - 327
Target Start/End: Complemental strand, 53354630 - 53354576
Alignment:
Q  273 tccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||| ||||||||| |||||||||||| |  || ||||||||||||||||    
T  53354630 tccgacccatcaaagatgaacgactaatccgatttatgcgtagaggcatgcgcac 53354576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 327
Target Start/End: Complemental strand, 53599174 - 53599104
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||||| ||| ||||| |||| |||| ||| ||| ||||||| ||| || ||||||||||||||||    
T  53599174 ggctttcgcaccggtttccgatccactaaaggtgaacgattaatccggctcatgcgtagaggcatgcgcac 53599104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 327
Target Start/End: Complemental strand, 17080156 - 17080087
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||||| ||| | ||| ||| ||||| || |||||||||||| ||| || ||||||||||||||||    
T  17080156 gctttcgcaccggttttcgatccatcaaaggtgtgcgactaatccggctcatgcgtagaggcatgcgcac 17080087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 327
Target Start/End: Complemental strand, 23788494 - 23788441
Alignment:
Q  274 ccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||| |||| |||| ||||||||||  |||||| ||||||||||||||||    
T  23788494 ccgacccatcaaaaatgaacgactaatccagctcgtgcgtagaggcatgcgcac 23788441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 327
Target Start/End: Complemental strand, 24166563 - 24166494
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||||| ||| ||||| ||| ||||| || | |||||||| | |||||| ||||||||||||||||    
T  24166563 gctttcgcaccggtttccgatccatcaaaggtgggtgactaatctggctcgtgcgtagaggcatgcgcac 24166494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 322
Target Start/End: Complemental strand, 38168370 - 38168305
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatg 322  Q
    ||||||||||| ||| ||| |||||| |||| ||| ||||||||||| ||| || |||||||||||    
T  38168370 ggctttcgcaccggtttccaacccactaaaggtgaacgactaatccggctcatgcgtagaggcatg 38168305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 8424650 - 8424598
Alignment:
Q  275 cgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||||||||||||||| ||||  | ||||||  |||||||||||||||    
T  8424650 cgacccaccaaagatgagcgattaatttggctcgtgcatagaggcatgcgcac 8424598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 259 - 319
Target Start/End: Original strand, 24478983 - 24479043
Alignment:
Q  259 ctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggc 319  Q
    |||||| |||||| ||||| ||||||| | || |||| ||||||| |||||||||||||||    
T  24478983 ctttcgtactggtttccgatccaccaacggtgggcgattaatccggctcgtgtgtagaggc 24479043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 259 - 327
Target Start/End: Complemental strand, 29895899 - 29895831
Alignment:
Q  259 ctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||| ||| ||||| ||||||| | ||  ||||||||||| ||| || ||||||||||||||||    
T  29895899 ctttcgcaccggtttccgaaccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcac 29895831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 273 - 321
Target Start/End: Complemental strand, 30317331 - 30317283
Alignment:
Q  273 tccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcat 321  Q
    ||||||||||||||| || ||||||||| || |||||| ||||||||||    
T  30317331 tccgacccaccaaaggtgggcgactaattcggctcgtgcgtagaggcat 30317283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 259 - 327
Target Start/End: Complemental strand, 31588798 - 31588730
Alignment:
Q  259 ctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||  ||| ||||| ||||||||  ||||||||||||||| ||| || |||||| |||||||||    
T  31588798 ctttcgcatcggtttccgatccaccaaaagtgagcgactaatccggctcatgcgtagagacatgcgcac 31588730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 259 - 327
Target Start/End: Original strand, 42831 - 42899
Alignment:
Q  259 ctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||| ||| ||||||||||||||| || |||||||||||| ||| |||||||||||||||||||    
T  42831 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgtgtagaggcatgcgcac 42899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 257 - 327
Target Start/End: Original strand, 155708 - 155778
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||||| ||  ||||||||||||||| || |||||||||||| |||||| ||||||||||||||||    
T  155708 ggctttcgcaccggcttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcac 155778  T

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Target: scaffold0005 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 259 - 327
Target Start/End: Original strand, 250024 - 250092
Alignment:
Q  259 ctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||| | | |||||||||||||||  |||||||||||||| |||||| ||||||||||||||||    
T  250024 ctttcgcaccgatttccgacccaccaaaggcgagcgactaatccggctcgtgcgtagaggcatgcgcac 250092  T

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Target: scaffold0029 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 257 - 323
Target Start/End: Complemental strand, 41156 - 41090
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgc 323  Q
    |||||||| || ||| |||||| ||||||||||| |||||||||||| |||||| ||||||||||||    
T  41156 ggctttcgaaccggtttccgactcaccaaagatgggcgactaatccggctcgtgcgtagaggcatgc 41090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 257 - 327
Target Start/End: Complemental strand, 68626 - 68556
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||| |||||| ||| | ||||||||||||| || |||||||||||| |||||| ||||||||||||||||    
T  68626 ggctatcgcaccggttttcgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcac 68556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 259 - 327
Target Start/End: Complemental strand, 224427 - 224359
Alignment:
Q  259 ctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||| ||| ||||||||||||||||||  ||||||||||| |||||| ||||||| ||| ||||    
T  224427 ctttcgcaccggtttccgacccaccaaagatggacgactaatccggctcgtgcgtagaggtatgtgcac 224359  T

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Target: scaffold0011; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 260 - 327
Target Start/End: Complemental strand, 186626 - 186559
Alignment:
Q  260 tttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||| ||| ||| |||||||||| |||||||| ||||||||||| |||||| ||||||||||| ||||    
T  186626 tttcacaccggtttccgacccactaaagatgaacgactaatccggctcgtgcgtagaggcatgtgcac 186559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 265 - 327
Target Start/End: Complemental strand, 9949 - 9887
Alignment:
Q  265 cactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||| || |||||||||||| ||  ||||||||||| |||||| ||||||||||||||||    
T  9949 cactggtttctgacccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcac 9887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 258 - 323
Target Start/End: Complemental strand, 681 - 616
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgc 323  Q
    |||||||||| ||| ||||||||||||||| ||||||||||||| | ||| |  ||||||||||||    
T  681 gctttcgcaccggtttccgacccaccaaaggtgagcgactaatctggctcatacgtagaggcatgc 616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 327
Target Start/End: Complemental strand, 12685 - 12615
Alignment:
Q  257 ggctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||||| ||| ||  | ||| ||||| || |||||||||||||||| || ||||||||||||||||    
T  12685 ggctttcgcaccggtttctaatccatcaaaggtgggcgactaatccgactcatgcgtagaggcatgcgcac 12615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 273 - 327
Target Start/End: Complemental strand, 17486 - 17432
Alignment:
Q  273 tccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||| ||| | || |||||||||||| |||||||||||| ||||||||||    
T  17486 tccgacccatcaatggtgggcgactaatccggctcgtgtgtagaagcatgcgcac 17432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 327
Target Start/End: Original strand, 1612 - 1681
Alignment:
Q  258 gctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    |||||||||| ||| | ||||||||||||| || |||||||||  | ||| || ||||||||||||||||    
T  1612 gctttcgcaccggttttcgacccaccaaaggtgggcgactaatttggctcatgcgtagaggcatgcgcac 1681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 259 - 323
Target Start/End: Complemental strand, 12780 - 12716
Alignment:
Q  259 ctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgc 323  Q
    ||||||||| ||| || |||||| ||||| || ||||||||||||  ||||| ||||||||||||    
T  12780 ctttcgcaccggtttctgacccatcaaaggtgggcgactaatccggttcgtgcgtagaggcatgc 12716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 259 - 327
Target Start/End: Complemental strand, 16989 - 16921
Alignment:
Q  259 ctttcgcactggtgtccgacccaccaaagatgagcgactaatccgactcgtgtgtagaggcatgcgcac 327  Q
    ||||||||  ||| ||| ||||||||||| ||||||||||||| | |||||| |||||| ||| |||||    
T  16989 ctttcgcatcggtttccaacccaccaaaggtgagcgactaatctggctcgtgcgtagagacatacgcac 16921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 164 - 212
Target Start/End: Complemental strand, 43248 - 43200
Alignment:
Q  164 gttaaatatgtttttctccctataaatatactaacatttgtttttagtc 212  Q
    ||||||||||||||| ||||||||||||||| ||| |||  ||||||||    
T  43248 gttaaatatgtttttgtccctataaatataccaacttttcgttttagtc 43200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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