View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14647_low_2 (Length: 442)

Name: NF14647_low_2
Description: NF14647
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14647_low_2
NF14647_low_2
[»] chr6 (34 HSPs)
chr6 (229-421)||(16168506-16168699)
chr6 (322-421)||(11527577-11527676)
chr6 (322-415)||(9946689-9946782)
chr6 (321-421)||(2839666-2839766)
chr6 (231-417)||(32417587-32417792)
chr6 (231-417)||(32423428-32423633)
chr6 (275-421)||(20575453-20575610)
chr6 (322-437)||(2840036-2840156)
chr6 (322-421)||(17180114-17180222)
chr6 (336-435)||(20575646-20575748)
chr6 (351-421)||(32417510-32417580)
chr6 (351-421)||(32423351-32423421)
chr6 (351-421)||(16168704-16168774)
chr6 (351-421)||(17179665-17179735)
chr6 (349-421)||(9902276-9902348)
chr6 (351-411)||(20575610-20575670)
chr6 (322-421)||(28630601-28630700)
chr6 (318-404)||(9901957-9902052)
chr6 (351-421)||(32417570-32417640)
chr6 (351-421)||(32423411-32423481)
chr6 (324-420)||(10962780-10962885)
chr6 (322-421)||(24139483-24139591)
chr6 (322-357)||(10407717-10407752)
chr6 (351-421)||(10862600-10862671)
chr6 (322-357)||(11528020-11528055)
chr6 (241-284)||(16168533-16168576)
chr6 (351-418)||(16168644-16168711)
chr6 (229-284)||(20575610-20575665)
chr6 (354-395)||(9902341-9902382)
chr6 (354-399)||(20575415-20575460)
chr6 (354-399)||(32417472-32417517)
chr6 (354-399)||(32423313-32423358)
chr6 (241-281)||(32417477-32417517)
chr6 (241-281)||(32423318-32423358)
[»] chr8 (55 HSPs)
chr8 (241-413)||(11113599-11113772)
chr8 (229-421)||(36359941-36360152)
chr8 (278-421)||(9770725-9770878)
chr8 (278-421)||(45017787-45017940)
chr8 (322-421)||(23553395-23553503)
chr8 (318-421)||(14871336-14871440)
chr8 (322-421)||(40553232-40553331)
chr8 (351-421)||(43422958-43423028)
chr8 (320-421)||(6236220-6236321)
chr8 (322-421)||(30576644-30576752)
chr8 (322-421)||(44041272-44041380)
chr8 (326-405)||(23179043-23179122)
chr8 (351-421)||(9277006-9277076)
chr8 (351-417)||(29794280-29794346)
chr8 (336-421)||(9770601-9770686)
chr8 (351-412)||(40553321-40553382)
chr8 (351-421)||(16197069-16197139)
chr8 (351-437)||(8713865-8713956)
chr8 (351-421)||(45017943-45018011)
chr8 (351-413)||(4613788-4613850)
chr8 (359-413)||(30576200-30576254)
chr8 (351-421)||(36360097-36360167)
chr8 (359-421)||(39700865-39700927)
chr8 (351-421)||(43422898-43422968)
chr8 (354-399)||(36314732-36314777)
chr8 (318-421)||(25737144-25737256)
chr8 (322-421)||(39700925-39701033)
chr8 (366-421)||(43423070-43423125)
chr8 (354-404)||(36360160-36360210)
chr8 (322-421)||(25730107-25730216)
chr8 (354-399)||(36359903-36359948)
chr8 (229-290)||(43422973-43423034)
chr8 (351-411)||(9770662-9770722)
chr8 (351-399)||(25737106-25737154)
chr8 (241-284)||(11113618-11113661)
chr8 (351-421)||(25737631-25737702)
chr8 (237-284)||(25737631-25737678)
chr8 (322-357)||(35434314-35434349)
chr8 (241-284)||(39701475-39701518)
chr8 (351-394)||(40552829-40552872)
chr8 (359-398)||(44041378-44041417)
chr8 (238-280)||(16208776-16208818)
chr8 (351-397)||(30576742-30576788)
chr8 (351-421)||(39701415-39701485)
chr8 (354-399)||(9770871-9770916)
chr8 (320-357)||(16208672-16208709)
chr8 (354-399)||(29794343-29794388)
chr8 (351-399)||(8713848-8713896)
chr8 (354-394)||(9277069-9277109)
chr8 (355-403)||(11113549-11113597)
chr8 (351-399)||(11113729-11113777)
chr8 (351-399)||(13771889-13771937)
chr8 (354-398)||(29792603-29792647)
chr8 (241-281)||(36359908-36359948)
chr8 (354-398)||(45018004-45018048)
[»] chr7 (64 HSPs)
chr7 (229-421)||(31893291-31893493)
chr7 (241-421)||(34951268-34951458)
chr7 (275-399)||(36566449-36566574)
chr7 (241-421)||(19925232-19925421)
chr7 (322-418)||(1441417-1441513)
chr7 (229-348)||(33879405-33879524)
chr7 (322-412)||(5559603-5559692)
chr7 (322-421)||(28256921-28257020)
chr7 (325-415)||(10620213-10620303)
chr7 (336-421)||(31893474-31893559)
chr7 (322-421)||(35214848-35214956)
chr7 (323-421)||(1346521-1346624)
chr7 (351-413)||(31175970-31176032)
chr7 (351-421)||(33879529-33879599)
chr7 (275-419)||(21413037-21413190)
chr7 (322-421)||(39958728-39958827)
chr7 (275-411)||(4187617-4187763)
chr7 (351-421)||(21412907-21412977)
chr7 (351-420)||(19925147-19925215)
chr7 (322-394)||(42990993-42991064)
chr7 (322-421)||(8040131-8040229)
chr7 (318-412)||(33235084-33235187)
chr7 (351-421)||(5805079-5805149)
chr7 (351-421)||(5805607-5805677)
chr7 (351-421)||(21433185-21433255)
chr7 (351-421)||(34951475-34951545)
chr7 (322-418)||(33235527-33235632)
chr7 (321-417)||(35215298-35215403)
chr7 (351-421)||(5559149-5559220)
chr7 (354-397)||(35215400-35215443)
chr7 (359-437)||(40904711-40904794)
chr7 (241-300)||(41020121-41020180)
chr7 (351-417)||(1286415-1286481)
chr7 (384-437)||(8039683-8039741)
chr7 (322-360)||(20183880-20183918)
chr7 (351-421)||(22876867-22876937)
chr7 (351-421)||(36566379-36566449)
chr7 (229-290)||(22876861-22876922)
chr7 (351-395)||(1349225-1349269)
chr7 (359-399)||(5559698-5559738)
chr7 (351-411)||(10619851-10619911)
chr7 (377-421)||(20366089-20366133)
chr7 (351-411)||(31893438-31893498)
chr7 (365-421)||(33879483-33879539)
chr7 (362-421)||(36566319-36566379)
chr7 (241-284)||(21412934-21412977)
chr7 (322-357)||(23150753-23150788)
chr7 (322-381)||(28104641-28104700)
chr7 (241-284)||(31175970-31176013)
chr7 (241-284)||(33879529-33879572)
chr7 (351-397)||(1441011-1441057)
chr7 (359-421)||(20101863-20101924)
chr7 (351-397)||(28256558-28256604)
chr7 (351-421)||(41020137-41020207)
chr7 (362-411)||(23679554-23679603)
chr7 (322-355)||(27995177-27995210)
chr7 (351-412)||(39959207-39959268)
chr7 (351-399)||(8040219-8040267)
chr7 (351-399)||(20366611-20366659)
chr7 (351-411)||(21433348-21433408)
chr7 (355-399)||(23150642-23150686)
chr7 (351-399)||(27995064-27995112)
chr7 (359-399)||(31893557-31893597)
chr7 (237-281)||(34951538-34951582)
[»] chr2 (34 HSPs)
chr2 (247-421)||(31264058-31264242)
chr2 (278-421)||(41265183-41265328)
chr2 (275-420)||(39376215-39376360)
chr2 (276-398)||(21813209-21813332)
chr2 (241-421)||(16780946-16781132)
chr2 (322-421)||(36196479-36196587)
chr2 (336-411)||(5116895-5116970)
chr2 (322-421)||(20535938-20536037)
chr2 (322-417)||(27893079-27893174)
chr2 (336-421)||(37542987-37543072)
chr2 (351-421)||(30907114-30907184)
chr2 (351-421)||(31263965-31264035)
chr2 (229-421)||(34336075-34336282)
chr2 (318-421)||(27893532-27893644)
chr2 (275-421)||(30907244-30907398)
chr2 (351-421)||(19080669-19080739)
chr2 (359-421)||(37543101-37543163)
chr2 (322-394)||(39301808-39301880)
chr2 (237-285)||(39376419-39376467)
chr2 (351-437)||(30907153-30907244)
chr2 (229-284)||(31264172-31264227)
chr2 (351-417)||(34336287-34336353)
chr2 (351-417)||(34429725-34429791)
chr2 (351-421)||(39376420-39376490)
chr2 (322-357)||(20535556-20535591)
chr2 (234-285)||(37543007-37543058)
chr2 (351-421)||(8260425-8260495)
chr2 (359-397)||(13315809-13315847)
chr2 (238-284)||(39301837-39301883)
chr2 (354-399)||(27893637-27893682)
chr2 (354-399)||(34429683-34429728)
chr2 (243-284)||(41265258-41265299)
chr2 (237-281)||(31263928-31263972)
chr2 (359-395)||(37543161-37543197)
[»] chr4 (43 HSPs)
chr4 (229-352)||(36890527-36890652)
chr4 (229-421)||(43098223-43098420)
chr4 (275-421)||(26329874-26330030)
chr4 (16-157)||(6921827-6921984)
chr4 (324-421)||(19631804-19631905)
chr4 (322-398)||(44916295-44916371)
chr4 (322-421)||(52183408-52183507)
chr4 (351-421)||(43098425-43098495)
chr4 (322-395)||(30543112-30543185)
chr4 (351-420)||(26329805-26329874)
chr4 (322-421)||(52865997-52866096)
chr4 (351-421)||(41735853-41735923)
chr4 (276-420)||(22025095-22025249)
chr4 (359-420)||(22025322-22025383)
chr4 (366-421)||(2788831-2788886)
chr4 (229-300)||(2788912-2788983)
chr4 (336-399)||(8408354-8408417)
chr4 (229-300)||(41735868-41735939)
chr4 (351-421)||(2788988-2789058)
chr4 (351-421)||(2909216-2909286)
chr4 (351-421)||(9320051-9320121)
chr4 (351-421)||(26330020-26330090)
chr4 (351-421)||(31229296-31229366)
chr4 (331-395)||(52866347-52866411)
chr4 (351-437)||(8408873-8408964)
chr4 (351-421)||(2788928-2788998)
chr4 (322-411)||(8408393-8408491)
chr4 (351-421)||(35046469-35046539)
chr4 (351-421)||(35046560-35046630)
chr4 (351-413)||(52181764-52181826)
chr4 (336-388)||(35024029-35024081)
chr4 (359-399)||(43098185-43098225)
chr4 (241-284)||(2788988-2789031)
chr4 (241-284)||(8408359-8408402)
chr4 (359-397)||(2508267-2508305)
chr4 (322-356)||(19681304-19681338)
chr4 (305-343)||(35023938-35023976)
chr4 (351-421)||(43098365-43098435)
chr4 (352-401)||(35023858-35023907)
chr4 (336-412)||(35023796-35023872)
chr4 (351-399)||(41735815-41735863)
chr4 (351-399)||(42116081-42116129)
chr4 (236-284)||(44916324-44916372)
[»] chr1 (31 HSPs)
chr1 (324-421)||(10685889-10685986)
chr1 (229-343)||(1765821-1765936)
chr1 (318-421)||(4772617-4772720)
chr1 (324-402)||(4772171-4772249)
chr1 (322-421)||(27351092-27351200)
chr1 (322-420)||(49650985-49651083)
chr1 (351-420)||(8902803-8902872)
chr1 (351-420)||(29419062-29419131)
chr1 (322-437)||(49650593-49650714)
chr1 (359-421)||(11897883-11897945)
chr1 (322-421)||(48352717-48352825)
chr1 (237-284)||(10685912-10685959)
chr1 (322-421)||(10686689-10686797)
chr1 (322-421)||(27351519-27351618)
chr1 (355-421)||(44964031-44964097)
chr1 (362-399)||(29419133-29419170)
chr1 (322-394)||(4030728-4030800)
chr1 (237-281)||(27351055-27351099)
chr1 (241-284)||(4772650-4772693)
chr1 (359-435)||(44964095-44964175)
chr1 (351-421)||(1765881-1765951)
chr1 (351-421)||(17898801-17898871)
chr1 (351-421)||(44963880-44963950)
chr1 (377-421)||(4030344-4030389)
chr1 (354-399)||(10685851-10685896)
chr1 (354-399)||(10686790-10686835)
chr1 (354-399)||(48352818-48352863)
chr1 (241-281)||(10685856-10685896)
chr1 (241-281)||(10686790-10686830)
chr1 (339-395)||(28055763-28055819)
chr1 (355-399)||(39302765-39302809)
[»] chr5 (34 HSPs)
chr5 (322-397)||(26275983-26276058)
chr5 (322-435)||(35189936-35190053)
chr5 (322-421)||(35190397-35190495)
chr5 (322-417)||(36417931-36418026)
chr5 (322-397)||(38082621-38082696)
chr5 (322-418)||(13538513-13538613)
chr5 (275-421)||(6336254-6336410)
chr5 (351-418)||(36418413-36418480)
chr5 (321-421)||(26275545-26275645)
chr5 (351-421)||(32660240-32660310)
chr5 (322-421)||(38405522-38405618)
chr5 (328-396)||(38405112-38405179)
chr5 (322-421)||(20728569-20728677)
chr5 (351-421)||(6336184-6336254)
chr5 (351-417)||(30737785-30737851)
chr5 (349-399)||(31813953-31814003)
chr5 (322-399)||(32459430-32459516)
chr5 (351-421)||(32660300-32660370)
chr5 (368-421)||(13543125-13543178)
chr5 (322-359)||(19278816-19278853)
chr5 (275-343)||(32660370-32660439)
chr5 (351-399)||(6336146-6336194)
chr5 (351-399)||(18951306-18951354)
chr5 (237-281)||(20728532-20728576)
chr5 (322-397)||(20729019-20729103)
chr5 (322-357)||(5734576-5734611)
chr5 (322-357)||(5734956-5734991)
chr5 (351-390)||(18238351-18238390)
chr5 (336-399)||(20729093-20729156)
chr5 (241-284)||(26275512-26275555)
chr5 (241-280)||(35190489-35190528)
chr5 (351-397)||(35891274-35891320)
chr5 (354-399)||(20728531-20728576)
chr5 (351-399)||(1722503-1722551)
[»] chr3 (22 HSPs)
chr3 (322-417)||(3088077-3088172)
chr3 (227-328)||(14964727-14964829)
chr3 (322-411)||(4276600-4276689)
chr3 (251-384)||(5505591-5505725)
chr3 (229-357)||(54456725-54456863)
chr3 (322-399)||(35555958-35556035)
chr3 (351-421)||(31247657-31247727)
chr3 (322-399)||(14629288-14629365)
chr3 (351-421)||(54456808-54456878)
chr3 (351-398)||(14964737-14964784)
chr3 (351-419)||(5505753-5505822)
chr3 (241-281)||(31247720-31247760)
chr3 (322-421)||(35555568-35555676)
chr3 (229-284)||(4276191-4276246)
chr3 (322-421)||(50530287-50530385)
chr3 (322-360)||(35545215-35545253)
chr3 (351-397)||(50530251-50530297)
chr3 (354-399)||(21377075-21377120)
chr3 (354-399)||(31247720-31247765)
chr3 (236-284)||(3087085-3087132)
chr3 (241-284)||(19153885-19153929)
chr3 (377-417)||(21377038-21377078)
[»] scaffold0027 (3 HSPs)
scaffold0027 (322-421)||(9435-9534)
scaffold0027 (365-421)||(9900-9956)
scaffold0027 (241-281)||(9949-9989)
[»] scaffold0019 (5 HSPs)
scaffold0019 (354-421)||(124373-124440)
scaffold0019 (275-343)||(124253-124322)
scaffold0019 (351-399)||(124146-124194)
scaffold0019 (369-421)||(124328-124380)
scaffold0019 (241-281)||(124373-124413)
[»] scaffold0746 (2 HSPs)
scaffold0746 (322-421)||(510-618)
scaffold0746 (322-357)||(134-169)
[»] scaffold0070 (4 HSPs)
scaffold0070 (322-421)||(28585-28693)
scaffold0070 (322-397)||(29034-29108)
scaffold0070 (241-280)||(28552-28591)
scaffold0070 (359-399)||(28547-28587)
[»] scaffold0041 (1 HSPs)
scaffold0041 (359-437)||(45224-45307)
[»] scaffold0374 (2 HSPs)
scaffold0374 (322-353)||(16582-16613)
scaffold0374 (322-399)||(16176-16262)


Alignment Details
Target: chr6 (Bit Score: 106; Significance: 7e-53; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 229 - 421
Target Start/End: Complemental strand, 16168699 - 16168506
Alignment:
Q  229 tcaaataagtctttttaatttgacagaatttgcaagttagttctttaagtttcaaactaaaagaacctattt-aaacttttgaaacagtgacgatgaaat 327  Q
    ||||||| ||||||||| |||||| ||| |  |||||||||  |||||||||||||||||||| |||||||| ||||||||||||| |||| | ||||||    
T  16168699 tcaaataggtctttttagtttgactgaaatcccaagttagtcttttaagtttcaaactaaaaggacctatttgaaacttttgaaacggtgagggtgaaat 16168600  T
Q  328 agtttatcaactaaaatgacttatttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    |||||||||||||||| ||| ||||||||| ||||| |||||||||||||||| ||||||||||||| ||||||| |||||||||| |||||||    
T  16168599 agtttatcaactaaaaggacctatttgaaacttaaaggactaacttggaaattctgtcaaactaaaatgacctaattgaaactttcaaaactta 16168506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 322 - 421
Target Start/End: Complemental strand, 11527676 - 11527577
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    |||||||||||||||||||||||||| ||||||||| ||||| ||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||    
T  11527676 tgaaatagtttatcaactaaaatgacctatttgaaacttaaaggactaacttgtgaattttgtcaaactaaaaggacctaattgaaactttcgaaactta 11527577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 322 - 415
Target Start/End: Original strand, 9946689 - 9946782
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcga 415  Q
    |||||||||||||||||||||| ||| | ||||||||||||| |||||| ||||||||| ||||||||||||| ||||||| ||||||||||||    
T  9946689 tgaaatagtttatcaactaaaaggacctctttgaaatttaaaggactaatttggaaattatgtcaaactaaaatgacctaattgaaactttcga 9946782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 321 - 421
Target Start/End: Complemental strand, 2839766 - 2839666
Alignment:
Q  321 atgaaatagtttatcaactaaaatgacttatttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactt 420  Q
    |||||||||||||||||||||||  || ||||||||||||||| ||||||||||  |||| ||||||| ||||||||||||| ||||||||| |||||||    
T  2839766 atgaaatagtttatcaactaaaaaaacctatttgaaatttaaaggactaacttgagaattctgtcaaattaaaaggacctaattgaaacttttgaaactt 2839667  T
Q  421 a 421  Q
    |    
T  2839666 a 2839666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 231 - 417
Target Start/End: Original strand, 32417587 - 32417792
Alignment:
Q  231 aaataagtctttttaatttgacagaatttgcaagttagttctttaagtttcaaa---------ctaaaagaacctattt-aaacttttgaaacagtgacg 320  Q
    ||||| ||| ||||| ||||||||||||| ||| ||||| ||||||||||||||         ||||||  || ||||| |||||||||||||  |||||    
T  32417587 aaatatgtccttttagtttgacagaatttccaaattagtcctttaagtttcaaaatttttaaactaaaatgacatatttgaaacttttgaaacgatgacg 32417686  T
Q  321 atgaaatagtttatcaactaaaatgacttatttgaaattt---------aaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactt 411  Q
     |||||||||||||||||||||| ||| ||||||||| ||         ||| ||||||||| |||||||||||||||| ||||||||||| ||||||||    
T  32417687 gtgaaatagtttatcaactaaaaggacctatttgaaacttctgaaacttaaatgactaacttagaaattttgtcaaactgaaaggacctaattgaaactt 32417786  T
Q  412 tcgaaa 417  Q
    ||||||    
T  32417787 tcgaaa 32417792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 231 - 417
Target Start/End: Original strand, 32423428 - 32423633
Alignment:
Q  231 aaataagtctttttaatttgacagaatttgcaagttagttctttaagtttcaaa---------ctaaaagaacctattt-aaacttttgaaacagtgacg 320  Q
    ||||| ||| ||||| ||||||||||||| ||| ||||| ||||||||||||||         ||||||  || ||||| |||||||||||||  |||||    
T  32423428 aaatatgtccttttagtttgacagaatttccaaattagtcctttaagtttcaaaatttttaaactaaaatgacatatttgaaacttttgaaacgatgacg 32423527  T
Q  321 atgaaatagtttatcaactaaaatgacttatttgaaattt---------aaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactt 411  Q
     |||||||||||||||||||||| ||| ||||||||| ||         ||| ||||||||| |||||||||||||||| ||||||||||| ||||||||    
T  32423528 gtgaaatagtttatcaactaaaaggacctatttgaaacttctgaaacttaaatgactaacttagaaattttgtcaaactgaaaggacctaattgaaactt 32423627  T
Q  412 tcgaaa 417  Q
    ||||||    
T  32423628 tcgaaa 32423633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 275 - 421
Target Start/End: Complemental strand, 20575610 - 20575453
Alignment:
Q  275 aagtttcaaactaaaagaacctattt-aaacttttgaaacagtgacgatgaaa-tagtttatcaactaaaatgacttatttgaaa--tttaaaa------ 364  Q
    |||||||||| |||||| |||||||| ||||||||||||  |||||| ||||| ||||||||||||| ||||||| |||||||||  |||||||          
T  20575610 aagtttcaaattaaaaggacctatttgaaacttttgaaatggtgacggtgaaaatagtttatcaactgaaatgacctatttgaaacttttaaaacttaaa 20575511  T
Q  365 -gactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
     |||||||||||||||| | ||||||||||||||||||  | ||||||||||||||||    
T  20575510 ggactaacttggaaattctatcaaactaaaaggacctatttaaaactttcgaaactta 20575453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 322 - 437
Target Start/End: Original strand, 2840036 - 2840156
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactt- 420  Q
    |||||||||||||||||||||||||| ||||||||| ||||| || |||||||  |||| ||| |||||||||||| |||   |||||||| |||||||     
T  2840036 tgaaatagtttatcaactaaaatgacctatttgaaacttaaatgattaacttgagaattctgttaaactaaaaggatctattcgaaacttttgaaactta 2840135  T
Q  421 ----actaacttgagaattat 437  Q
        |||||||||||||||||    
T  2840136 aatgactaacttgagaattat 2840156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 322 - 421
Target Start/End: Original strand, 17180114 - 17180222
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttgaaa--tttaaaa-------gactaacttggaaattttgtcaaactaaaaggacctaaatgaaacttt 412  Q
    |||||||||||||||||||||||||  |||||||||  |||||||       |||||||||| ||||| ||||||||||||||||| ||| | |||||||    
T  17180114 tgaaatagtttatcaactaaaatgatctatttgaaacttttaaaacttaaaggactaacttgaaaattatgtcaaactaaaaggacataattaaaacttt 17180213  T
Q  413 cgaaactta 421  Q
    |||||||||    
T  17180214 cgaaactta 17180222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 336 - 435
Target Start/End: Original strand, 20575646 - 20575748
Alignment:
Q  336 aactaaaatgacttatttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactt----actaacttgag 431  Q
    |||||||| ||| ||||||||| || || ||||||||||| |||||||||||||||||||||| ||  | |||||||||||||||    |||||||||||    
T  20575646 aactaaaaggacctatttgaaacttgaa-gactaacttgggaattttgtcaaactaaaaggacttatttaaaactttcgaaacttaaaaactaacttgag 20575744  T
Q  432 aatt 435  Q
    ||||    
T  20575745 aatt 20575748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 351 - 421
Target Start/End: Complemental strand, 32417580 - 32417510
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    ||||||| ||||| |||||||||| ||||||||||||||||||| ||| ||| | ||||||||||||||||    
T  32417580 tttgaaacttaaatgactaacttgaaaattttgtcaaactaaaatgacataattaaaactttcgaaactta 32417510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 351 - 421
Target Start/End: Complemental strand, 32423421 - 32423351
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    ||||||| ||||| |||||||||| ||||||||||||||||||| ||| ||| | ||||||||||||||||    
T  32423421 tttgaaacttaaatgactaacttgaaaattttgtcaaactaaaatgacataattaaaactttcgaaactta 32423351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 351 - 421
Target Start/End: Original strand, 16168704 - 16168774
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    |||||||  ||| |||||||||||  |||| ||||||||||||||||||||| |||||||| |||||||||    
T  16168704 tttgaaacgtaatagactaacttgagaattctgtcaaactaaaaggacctaattgaaacttgcgaaactta 16168774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 351 - 421
Target Start/End: Complemental strand, 17179735 - 17179665
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    ||||||||||||| |||||||||| ||||| | |||||||||| |||||||| | ||| ||||||||||||    
T  17179735 tttgaaatttaaaggactaacttgaaaattctatcaaactaaagggacctaattaaaattttcgaaactta 17179665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 349 - 421
Target Start/End: Original strand, 9902276 - 9902348
Alignment:
Q  349 tatttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    ||||||||| |||||  ||||||| || |||| ||||||||||||||||| ||| | ||||||||||||||||    
T  9902276 tatttgaaacttaaagaactaactcgggaattatgtcaaactaaaaggacataattaaaactttcgaaactta 9902348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 351 - 411
Target Start/End: Original strand, 20575610 - 20575670
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactt 411  Q
    ||||||| ||||| ||||||||||| |||| ||||||||||||||||||||  ||||||||    
T  20575610 tttgaaacttaaaggactaacttgggaattctgtcaaactaaaaggacctatttgaaactt 20575670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 322 - 421
Target Start/End: Original strand, 28630601 - 28630700
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    |||||||||||||||||||||| ||| ||||||||  |||||  |||||||| | |||| |  ||||||||| ||  |||| |||||||||| |||||||    
T  28630601 tgaaatagtttatcaactaaaaggacctatttgaagcttaaagtactaacttaggaattctaccaaactaaatgggtctaattgaaactttcaaaactta 28630700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 404
Target Start/End: Complemental strand, 9902052 - 9901957
Alignment:
Q  318 acgatgaaatagtttatcaactaaaatgacttatttgaaatt--------taaaag-actaacttggaaattttgtcaaactaaaaggacctaaat 404  Q
    |||||||||||||||||||||||||||||| ||||| ||| |        |||||| ||||||||||||||| || ||||||||||||||| ||||    
T  9902052 acgatgaaatagtttatcaactaaaatgacctatttaaaacttttgaaactaaaagcactaacttggaaattctggcaaactaaaaggaccaaaat 9901957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 421
Target Start/End: Complemental strand, 32417640 - 32417570
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    ||||||| ||||| |||||| ||||||||| ||||||||||||||||| ||  | ||||||| ||||||||    
T  32417640 tttgaaacttaaaggactaatttggaaattctgtcaaactaaaaggacatatttaaaacttttgaaactta 32417570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 421
Target Start/End: Complemental strand, 32423481 - 32423411
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    ||||||| ||||| |||||| ||||||||| ||||||||||||||||| ||  | ||||||| ||||||||    
T  32423481 tttgaaacttaaaggactaatttggaaattctgtcaaactaaaaggacatatttaaaacttttgaaactta 32423411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 420
Target Start/End: Complemental strand, 10962885 - 10962780
Alignment:
Q  324 aaatagtttatcaactaaaatgacttatttgaaa--tttaaaa-------gactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcg 414  Q
    |||||||||||||||||||||||| |||||||||  |||||||       |||||| || |||||| | | ||| |||||||| |||| |||||||||||    
T  10962885 aaatagtttatcaactaaaatgacatatttgaaacttttaaaacttaaaggactaatttagaaattctattaaaataaaaggatctaattgaaactttcg 10962786  T
Q  415 aaactt 420  Q
    ||||||    
T  10962785 aaactt 10962780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 322 - 421
Target Start/End: Original strand, 24139483 - 24139591
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttgaaat---------ttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaacttt 412  Q
    ||||||| |||||||||||||| ||||||||||||||         ||||| ||||||| ||  |||| | ||||||||||||||| ||| | |||||||    
T  24139483 tgaaataatttatcaactaaaaagacttatttgaaatttttgaaacttaaaggactaacctgataattctatcaaactaaaaggacttaattaaaacttt 24139582  T
Q  413 cgaaactta 421  Q
    |||||||||    
T  24139583 cgaaactta 24139591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 322 - 357
Target Start/End: Original strand, 10407717 - 10407752
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttgaaa 357  Q
    |||||||||||||||||||||||||| |||||||||    
T  10407717 tgaaatagtttatcaactaaaatgacatatttgaaa 10407752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 421
Target Start/End: Original strand, 10862600 - 10862671
Alignment:
Q  351 tttgaaatttaaaa-gactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    |||||||||||||| |||||||| || |||| | ||||||||||| ||| ||| |||||||||| |||||||    
T  10862600 tttgaaatttaaaatgactaactggggaattctttcaaactaaaatgacttaattgaaactttcaaaactta 10862671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 322 - 357
Target Start/End: Original strand, 11528020 - 11528055
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttgaaa 357  Q
    |||||||||||||||||||||||||| |||||||||    
T  11528020 tgaaatagtttatcaactaaaatgacatatttgaaa 11528055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 284
Target Start/End: Original strand, 16168533 - 16168576
Alignment:
Q  241 ttttaatttgacagaatttgcaagttagttctttaagtttcaaa 284  Q
    ||||| ||||||||||||| ||||||||| ||||||||||||||    
T  16168533 ttttagtttgacagaatttccaagttagtcctttaagtttcaaa 16168576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 418
Target Start/End: Original strand, 16168644 - 16168711
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaac 418  Q
    ||||||| ||||||||||||||||| | ||  |||||||||||| ||||||  ||||||||| |||||    
T  16168644 tttgaaacttaaaagactaacttgggatttcagtcaaactaaaaagacctatttgaaacttttgaaac 16168711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 284
Target Start/End: Complemental strand, 20575665 - 20575610
Alignment:
Q  229 tcaaataagtctttttaatttgacagaatttgcaagttagttctttaagtttcaaa 284  Q
    ||||||| ||| ||||| ||||||||||||  ||||||||| ||||||||||||||    
T  20575665 tcaaataggtccttttagtttgacagaattcccaagttagtcctttaagtttcaaa 20575610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 395
Target Start/End: Original strand, 9902341 - 9902382
Alignment:
Q  354 gaaatttaaaagactaacttggaaattttgtcaaactaaaag 395  Q
    |||| |||||||||||||||| ||||| ||||||||||||||    
T  9902341 gaaacttaaaagactaacttgaaaattctgtcaaactaaaag 9902382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 20575460 - 20575415
Alignment:
Q  354 gaaatttaaaagactaacttggaaattttgtcaaactaaaaggacc 399  Q
    |||| ||||| |||||||||||||||| | ||||||||||||||||    
T  20575460 gaaacttaaaggactaacttggaaattctatcaaactaaaaggacc 20575415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 32417517 - 32417472
Alignment:
Q  354 gaaatttaaaagactaacttggaaattttgtcaaactaaaaggacc 399  Q
    |||| ||||| |||||||||| ||||| ||||||||||||||||||    
T  32417517 gaaacttaaaggactaacttgaaaattctgtcaaactaaaaggacc 32417472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 32423358 - 32423313
Alignment:
Q  354 gaaatttaaaagactaacttggaaattttgtcaaactaaaaggacc 399  Q
    |||| ||||| |||||||||| ||||| ||||||||||||||||||    
T  32423358 gaaacttaaaggactaacttgaaaattctgtcaaactaaaaggacc 32423313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 241 - 281
Target Start/End: Original strand, 32417477 - 32417517
Alignment:
Q  241 ttttaatttgacagaatttgcaagttagttctttaagtttc 281  Q
    ||||| ||||||||||||| ||||||||| |||||||||||    
T  32417477 ttttagtttgacagaattttcaagttagtcctttaagtttc 32417517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 241 - 281
Target Start/End: Original strand, 32423318 - 32423358
Alignment:
Q  241 ttttaatttgacagaatttgcaagttagttctttaagtttc 281  Q
    ||||| ||||||||||||| ||||||||| |||||||||||    
T  32423318 ttttagtttgacagaattttcaagttagtcctttaagtttc 32423358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 94; Significance: 1e-45; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 241 - 413
Target Start/End: Complemental strand, 11113772 - 11113599
Alignment:
Q  241 ttttaatttgacagaatttgcaagttagttctttaagtttcaaactaaaagaacctatttaaa-cttttgaaacagtgacgatgaaatagtttatcaact 339  Q
    ||||||||||||| ||||  |||  ||||  |||||||||||||||||||  || ||||| || |||||||||| |||||||||||||||||||||||||    
T  11113772 ttttaatttgacaaaattcccaaactagtcttttaagtttcaaactaaaatgacatatttgaagcttttgaaacggtgacgatgaaatagtttatcaact 11113673  T
Q  340 aaaatgacttatttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttc 413  Q
    ||||| |||||||||||| ||||| |||||||||||||||| ||||||||||||||||||| | ||||||||||    
T  11113672 aaaataacttatttgaaacttaaaggactaacttggaaattctgtcaaactaaaaggacctgattgaaactttc 11113599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 229 - 421
Target Start/End: Complemental strand, 36360152 - 36359941
Alignment:
Q  229 tcaaataagtctttttaatttgacagaatttgcaagttagttctttaagtttcaaa---------ctaaaagaacctattt-aaacttttgaaacagtga 318  Q
    ||||||||||||||||||||||||| ||||  ||||||||| ||||||||||||||         ||||||| |  ||||| ||||||||||||| ||||    
T  36360152 tcaaataagtctttttaatttgacaaaattgccaagttagtcctttaagtttcaaaagtttcaaactaaaaggatttatttgaaacttttgaaacggtga 36360053  T
Q  319 cgatgaaatagtttatcaactaaaatgacttatttgaaa--tttaaaa-------gactaacttggaaattttgtcaaactaaaaggacctaaatgaaac 409  Q
    || | |||||||||||||||||||||||| |||||||||  |||||||       ||||||||||| |||| |||||||||||||  |||||| ||||||    
T  36360052 cggtaaaatagtttatcaactaaaatgacctatttgaaacttttaaaacttaaaggactaacttgggaattctgtcaaactaaaaatacctaattgaaac 36359953  T
Q  410 tttcgaaactta 421  Q
    ||||||||||||    
T  36359952 tttcgaaactta 36359941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 278 - 421
Target Start/End: Original strand, 9770725 - 9770878
Alignment:
Q  278 tttcaaactaaaagaacctattt-aaacttttgaaacagtgacgatgaaatagtttatcaactaaaatgactta---------tttgaaatttaaaagac 367  Q
    |||||||||||||| | |||||| |||||||||||| ||||| | |||||||||||||||||||||| ||| ||         ||||||| ||||| |||    
T  9770725 tttcaaactaaaaggatctatttgaaacttttgaaatagtgatggtgaaatagtttatcaactaaaaggacctatttgaaacttttgaaaattaaaggac 9770824  T
Q  368 taacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    |||||||| |||| ||||||||||||| ||| ||| ||||||||||||||||||    
T  9770825 taacttgggaattctgtcaaactaaaatgacttaattgaaactttcgaaactta 9770878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 278 - 421
Target Start/End: Complemental strand, 45017940 - 45017787
Alignment:
Q  278 tttcaaactaaaagaacctattt-aaacttttgaaacagtgacgatgaaatagtttatcaactaaaatgacttatttgaaat---------ttaaaagac 367  Q
    |||||||||||||  |||||||| |||| |||||||| |||||| |||||||||||||||| ||||||||||||||||||||         ||||| |||    
T  45017940 tttcaaactaaaatgacctatttgaaacctttgaaacggtgacggtgaaatagtttatcaattaaaatgacttatttgaaatttttgaatcttaaaggac 45017841  T
Q  368 taacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    ||| |||| |||| ||| ||||||||| ||| ||| ||||||||||||||||||    
T  45017840 taatttgggaattctgttaaactaaaatgacataattgaaactttcgaaactta 45017787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 322 - 421
Target Start/End: Complemental strand, 23553503 - 23553395
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttgaaa---------tttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaacttt 412  Q
    |||||||||||||||||||||||||| |||||||||         |||||||||| ||||||  |||||||||||||||||||||||||| |||||||||    
T  23553503 tgaaatagtttatcaactaaaatgacctatttgaaacttttgaaatttaaaagaccaacttgagaattttgtcaaactaaaaggacctaattgaaacttt 23553404  T
Q  413 cgaaactta 421  Q
    |||||||||    
T  23553403 cgaaactta 23553395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 318 - 421
Target Start/End: Original strand, 14871336 - 14871440
Alignment:
Q  318 acgatgaaatagtttatcaactaaaatgacttatttgaaatttaaaagactaacttggaaattttgtc-aaactaaaaggacctaaatgaaactttcgaa 416  Q
    ||||| |||||||||||||||||||| ||| ||||||||| ||||| |||||| |||  |||| |||| |||||||||| |||||| |||||||||||||    
T  14871336 acgattaaatagtttatcaactaaaaggacctatttgaaacttaaaggactaatttgagaattatgtcaaaactaaaagaacctaattgaaactttcgaa 14871435  T
Q  417 actta 421  Q
    |||||    
T  14871436 actta 14871440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 322 - 421
Target Start/End: Original strand, 40553232 - 40553331
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    |||||||||||||||| ||||||||  ||||||||| ||||| || |||||||  |||| |||||||||||||||||| || ||||||||| ||||||||    
T  40553232 tgaaatagtttatcaagtaaaatgatctatttgaaacttaaatgattaacttgagaattctgtcaaactaaaaggaccaaattgaaacttttgaaactta 40553331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 351 - 421
Target Start/End: Complemental strand, 43423028 - 43422958
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||||||  ||||||||| ||||||||    
T  43423028 tttgaaatttaaaggactaacttggaaattttgtcaaactaaaatgacctatttgaaacttttgaaactta 43422958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 320 - 421
Target Start/End: Original strand, 6236220 - 6236321
Alignment:
Q  320 gatgaaatagtttatcaactaaaatgacttatttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaact 419  Q
    ||||||||||||| |||| ||||||||| ||||||||| |||||  |||||||||| || | ||||||| ||||||||||||| ||||||| | ||||||    
T  6236220 gatgaaatagtttttcaattaaaatgacctatttgaaacttaaagtactaacttgggaagtctgtcaaattaaaaggacctaattgaaactattgaaact 6236319  T
Q  420 ta 421  Q
    ||    
T  6236320 ta 6236321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 322 - 421
Target Start/End: Original strand, 30576644 - 30576752
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttattt---------gaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaacttt 412  Q
    |||||||||||||||||||||||||| |||||         |||| ||||| ||||||||||| |||| ||||||||||||||||||||| |||||||||    
T  30576644 tgaaatagtttatcaactaaaatgacatatttaaaacttttgaaacttaaaggactaacttgggaattctgtcaaactaaaaggacctaattgaaacttt 30576743  T
Q  413 cgaaactta 421  Q
     ||||||||    
T  30576744 tgaaactta 30576752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 322 - 421
Target Start/End: Original strand, 44041272 - 44041380
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttgaaat---------ttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaacttt 412  Q
    |||||||||||||||||||||||||||||||||||||         || |||||||||||| | |||| ||||||||||||||||| ||| |||||||||    
T  44041272 tgaaatagtttatcaactaaaatgacttatttgaaatttttgaaactttaaagactaacttaggaattctgtcaaactaaaaggacataattgaaacttt 44041371  T
Q  413 cgaaactta 421  Q
    | |||||||    
T  44041372 caaaactta 44041380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 326 - 405
Target Start/End: Complemental strand, 23179122 - 23179043
Alignment:
Q  326 atagtttatcaactaaaatgacttatttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatg 405  Q
    |||||||||||||||||| ||| || |||||| ||||| ||||||||||| |||| |||||||||||||||||| |||||    
T  23179122 atagtttatcaactaaaacgacctacttgaaacttaaaggactaacttgggaattctgtcaaactaaaaggaccaaaatg 23179043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 351 - 421
Target Start/End: Original strand, 9277006 - 9277076
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    ||||||| ||||| |||||||||||||||| | |||||||||||||| |||| ||||||||||||||||||    
T  9277006 tttgaaacttaaaggactaacttggaaattctatcaaactaaaaggatctaattgaaactttcgaaactta 9277076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 351 - 417
Target Start/End: Original strand, 29794280 - 29794346
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaa 417  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||   ||||||||||||    
T  29794280 tttgaaacttaaaagactaacttggaaattatgtcaaactaaaaggacctaatgaaaactttcgaaa 29794346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 336 - 421
Target Start/End: Complemental strand, 9770686 - 9770601
Alignment:
Q  336 aactaaaatgacttatttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    |||||||| ||| ||||||||| ||||| ||||||||||  |||| | ||||||||||||||| ||| ||||||||||||||||||    
T  9770686 aactaaaaggacctatttgaaacttaaatgactaacttgagaattctctcaaactaaaaggacttaattgaaactttcgaaactta 9770601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 351 - 412
Target Start/End: Original strand, 40553321 - 40553382
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaacttt 412  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||||| | |||||||||    
T  40553321 tttgaaacttaaaagactaacttagaaattttgtcaaactaaaaggacctgattgaaacttt 40553382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 351 - 421
Target Start/End: Complemental strand, 16197139 - 16197069
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    ||||||| ||||| || |||||||| |||| ||||||||||||||||| ||| ||||||||||||||||||    
T  16197139 tttgaaacttaaatgattaacttgggaattctgtcaaactaaaaggacataattgaaactttcgaaactta 16197069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 351 - 437
Target Start/End: Complemental strand, 8713956 - 8713865
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactt-----actaacttgagaattat 437  Q
    ||||||| ||||||||||||||||  ||||||||||||||||||| |  ||| ||||||||| |||||||     |||||||||||||||||    
T  8713956 tttgaaacttaaaagactaacttgtgaattttgtcaaactaaaagaatttaattgaaacttttgaaacttaaaggactaacttgagaattat 8713865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 351 - 421
Target Start/End: Original strand, 45017943 - 45018011
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    ||||||| ||||| ||||||||||||| ||  |||||||||||||||||||| | ||||||||||||||||    
T  45017943 tttgaaacttaaaggactaacttggaactt--gtcaaactaaaaggacctaattaaaactttcgaaactta 45018011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 351 - 413
Target Start/End: Complemental strand, 4613850 - 4613788
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttc 413  Q
    ||||||| ||||| |||||||| | ||||||||||||||||||||||| ||| ||||||||||    
T  4613850 tttgaaacttaaaggactaactcgaaaattttgtcaaactaaaaggacttaattgaaactttc 4613788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 359 - 413
Target Start/End: Complemental strand, 30576254 - 30576200
Alignment:
Q  359 ttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttc 413  Q
    |||||||||||||||||||||| || |||||||||||||| ||| ||||||||||    
T  30576254 ttaaaagactaacttggaaattctggcaaactaaaaggacttaattgaaactttc 30576200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 351 - 421
Target Start/End: Original strand, 36360097 - 36360167
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    ||||||| ||||| ||||||||||| |||||||||||| ||||| ||| ||  ||||||||||||||||||    
T  36360097 tttgaaacttaaaggactaacttggcaattttgtcaaattaaaaagacttatttgaaactttcgaaactta 36360167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 359 - 421
Target Start/End: Complemental strand, 39700927 - 39700865
Alignment:
Q  359 ttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    ||||| |||||||||   |||||||||||||||||||||||||| |||||||||| |||||||    
T  39700927 ttaaaggactaacttaagaattttgtcaaactaaaaggacctaattgaaactttcaaaactta 39700865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 351 - 421
Target Start/End: Complemental strand, 43422968 - 43422898
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    ||||||| ||||| ||||||||||| |||||||  ||| ||||||||||||| |||||||||| |||||||    
T  43422968 tttgaaacttaaaggactaacttgggaattttgctaaaataaaaggacctaattgaaactttcaaaactta 43422898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 36314732 - 36314777
Alignment:
Q  354 gaaatttaaaagactaacttggaaattttgtcaaactaaaaggacc 399  Q
    |||||||||||||||||||||  |||||||||||||||||||||||    
T  36314732 gaaatttaaaagactaacttgataattttgtcaaactaaaaggacc 36314777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 318 - 421
Target Start/End: Complemental strand, 25737256 - 25737144
Alignment:
Q  318 acgatgaaatagtttatcaactaaaatgacttat---------ttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaa 408  Q
    |||||||||||||||||||| ||||||||| |||         |||||||||||| ||||||||| | ||||  ||||||||||||||| |||  |||||    
T  25737256 acgatgaaatagtttatcaagtaaaatgacatatgtgaaacttttgaaatttaaaggactaacttaggaattcggtcaaactaaaaggatctatttgaaa 25737157  T
Q  409 ctttcgaaactta 421  Q
    |||| ||||||||    
T  25737156 cttttgaaactta 25737144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 322 - 421
Target Start/End: Complemental strand, 39701033 - 39700925
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttgaaattt---------aaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaacttt 412  Q
    |||||||||||||||||||||||||| ||||||||| ||         ||| || |||||| | |||||||||||||||||||||| ||| |||||||||    
T  39701033 tgaaatagtttatcaactaaaatgacatatttgaaacttttgaaacttaaaggattaacttaggaattttgtcaaactaaaaggacataattgaaacttt 39700934  T
Q  413 cgaaactta 421  Q
      |||||||    
T  39700933 taaaactta 39700925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 366 - 421
Target Start/End: Original strand, 43423070 - 43423125
Alignment:
Q  366 actaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    |||||||||| |||||||||||||||||| ||||||  ||||||||| ||||||||    
T  43423070 actaacttgggaattttgtcaaactaaaatgacctatttgaaacttttgaaactta 43423125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 354 - 404
Target Start/End: Original strand, 36360160 - 36360210
Alignment:
Q  354 gaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaat 404  Q
    |||| |||||||||||||||||||||| ||||||||||||| |||| ||||    
T  36360160 gaaacttaaaagactaacttggaaattctgtcaaactaaaatgaccaaaat 36360210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 322 - 421
Target Start/End: Original strand, 25730107 - 25730216
Alignment:
Q  322 tgaaatagtttatcaactaaaatgactta---------tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaa-atgaaactt 411  Q
    |||||||||||||||||||||||||| ||         ||||||||||||| ||||||||||  |||| ||||||| ||||| |||||||  ||||||||    
T  25730107 tgaaatagtttatcaactaaaatgacatatttgaaacttttgaaatttaaaggactaacttgagaattctgtcaaattaaaatgacctaatttgaaactt 25730206  T
Q  412 tcgaaactta 421  Q
    || |||||||    
T  25730207 tcaaaactta 25730216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 36359948 - 36359903
Alignment:
Q  354 gaaatttaaaagactaacttggaaattttgtcaaactaaaaggacc 399  Q
    |||| ||||| |||||||||||||||| ||||||||||||||||||    
T  36359948 gaaacttaaaggactaacttggaaattctgtcaaactaaaaggacc 36359903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 229 - 290
Target Start/End: Original strand, 43422973 - 43423034
Alignment:
Q  229 tcaaataagtctttttaatttgacagaatttgcaagttagttctttaagtttcaaactaaaa 290  Q
    ||||||| ||| ||||| ||||||| ||||| ||||||||| |||||| |||||||||||||    
T  43422973 tcaaataggtcattttagtttgacaaaatttccaagttagtcctttaaatttcaaactaaaa 43423034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 351 - 411
Target Start/End: Complemental strand, 9770722 - 9770662
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactt 411  Q
    ||||||| ||||| ||||||||| | |||| ||||||||||||||||||||  ||||||||    
T  9770722 tttgaaacttaaaggactaacttcggaattctgtcaaactaaaaggacctatttgaaactt 9770662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 351 - 399
Target Start/End: Complemental strand, 25737154 - 25737106
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacc 399  Q
    ||||||| ||||| |||||||||| ||||| ||||||||||||||||||    
T  25737154 tttgaaacttaaaggactaacttgaaaattatgtcaaactaaaaggacc 25737106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 284
Target Start/End: Original strand, 11113618 - 11113661
Alignment:
Q  241 ttttaatttgacagaatttgcaagttagttctttaagtttcaaa 284  Q
    ||||| ||||||||||||| ||||||||| ||||||||||||||    
T  11113618 ttttagtttgacagaatttccaagttagtcctttaagtttcaaa 11113661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 421
Target Start/End: Original strand, 25737631 - 25737702
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaa-atgaaactttcgaaactta 421  Q
    ||||||||||||| ||||||||||  |||| ||||||| ||||| |||||||  |||||||||| |||||||    
T  25737631 tttgaaatttaaaggactaacttgagaattctgtcaaattaaaaagacctaatttgaaactttcaaaactta 25737702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 284
Target Start/End: Complemental strand, 25737678 - 25737631
Alignment:
Q  237 gtctttttaatttgacagaatttgcaagttagttctttaagtttcaaa 284  Q
    ||||||||||||||||||||||  ||||||||| |||||| |||||||    
T  25737678 gtctttttaatttgacagaattctcaagttagtcctttaaatttcaaa 25737631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 322 - 357
Target Start/End: Original strand, 35434314 - 35434349
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttgaaa 357  Q
    |||||||||||||||||||||||||| |||||||||    
T  35434314 tgaaatagtttatcaactaaaatgacatatttgaaa 35434349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 284
Target Start/End: Complemental strand, 39701518 - 39701475
Alignment:
Q  241 ttttaatttgacagaatttgcaagttagttctttaagtttcaaa 284  Q
    ||||| ||||||||||||  ||||||||||||||||||||||||    
T  39701518 ttttagtttgacagaattctcaagttagttctttaagtttcaaa 39701475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 394
Target Start/End: Complemental strand, 40552872 - 40552829
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaa 394  Q
    ||||||||||||| | |||||||| |||||||||||||||||||    
T  40552872 tttgaaatttaaatggctaacttgaaaattttgtcaaactaaaa 40552829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 359 - 398
Target Start/End: Original strand, 44041378 - 44041417
Alignment:
Q  359 ttaaaagactaacttggaaattttgtcaaactaaaaggac 398  Q
    ||||| |||||||||| |||||||||||||||||||||||    
T  44041378 ttaaaggactaacttgaaaattttgtcaaactaaaaggac 44041417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 280
Target Start/End: Complemental strand, 16208818 - 16208776
Alignment:
Q  238 tctttttaatttgacagaatttgcaagttagttctttaagttt 280  Q
    |||||||| ||||||||||||  ||||||||||||||||||||    
T  16208818 tctttttagtttgacagaattctcaagttagttctttaagttt 16208776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 351 - 397
Target Start/End: Original strand, 30576742 - 30576788
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaagga 397  Q
    ||||||| ||| |||||||||||| ||||| ||||||||||||||||    
T  30576742 tttgaaacttagaagactaacttgaaaattctgtcaaactaaaagga 30576788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 351 - 421
Target Start/End: Original strand, 39701415 - 39701485
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    ||||||| ||||| ||||||  ||| |||| | ||||||||||||||| ||| ||||||||| ||||||||    
T  39701415 tttgaaacttaaatgactaatctgggaattctatcaaactaaaaggacttaattgaaacttttgaaactta 39701485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 9770871 - 9770916
Alignment:
Q  354 gaaatttaaaagactaacttggaaattttgtcaaactaaaaggacc 399  Q
    |||| ||||| ||||||||||  |||||||||||||||||||||||    
T  9770871 gaaacttaaaggactaacttgagaattttgtcaaactaaaaggacc 9770916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 16208672 - 16208709
Alignment:
Q  320 gatgaaatagtttatcaactaaaatgacttatttgaaa 357  Q
    |||||||||||||||||||||||| ||| |||||||||    
T  16208672 gatgaaatagtttatcaactaaaaggacatatttgaaa 16208709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 29794343 - 29794388
Alignment:
Q  354 gaaatttaaaagactaacttggaaattttgtcaaactaaaaggacc 399  Q
    |||||||||| ||||||||||| |||| ||||||||||||| ||||    
T  29794343 gaaatttaaaggactaacttgggaattctgtcaaactaaaatgacc 29794388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 351 - 399
Target Start/End: Complemental strand, 8713896 - 8713848
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacc 399  Q
    ||||||| ||||| ||||||||||  |||| ||||||||||||||||||    
T  8713896 tttgaaacttaaaggactaacttgagaattatgtcaaactaaaaggacc 8713848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 354 - 394
Target Start/End: Original strand, 9277069 - 9277109
Alignment:
Q  354 gaaatttaaaagactaacttggaaattttgtcaaactaaaa 394  Q
    |||| ||||||||||||||||| |||| |||||||||||||    
T  9277069 gaaacttaaaagactaacttgggaattctgtcaaactaaaa 9277109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 403
Target Start/End: Complemental strand, 11113597 - 11113549
Alignment:
Q  355 aaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaa 403  Q
    ||||||||| ||||||||| | |||| |||||||||||||||| |||||    
T  11113597 aaatttaaaggactaacttaggaattatgtcaaactaaaaggatctaaa 11113549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 351 - 399
Target Start/End: Original strand, 11113729 - 11113777
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacc 399  Q
    ||||||| |||||||||||  |||| |||||||||||| ||||||||||    
T  11113729 tttgaaacttaaaagactagtttgggaattttgtcaaattaaaaggacc 11113777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 351 - 399
Target Start/End: Original strand, 13771889 - 13771937
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacc 399  Q
    ||||||| ||||| ||||||||||| |||| ||||||||||||| ||||    
T  13771889 tttgaaacttaaaggactaacttgggaattatgtcaaactaaaatgacc 13771937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 354 - 398
Target Start/End: Original strand, 29792603 - 29792647
Alignment:
Q  354 gaaatttaaaagactaacttggaaattttgtcaaactaaaaggac 398  Q
    |||||||||| |||||| |||| |||| |||||||||||||||||    
T  29792603 gaaatttaaaggactaatttgggaattctgtcaaactaaaaggac 29792647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 241 - 281
Target Start/End: Original strand, 36359908 - 36359948
Alignment:
Q  241 ttttaatttgacagaatttgcaagttagttctttaagtttc 281  Q
    ||||| ||||||||||||| ||||||||| |||||||||||    
T  36359908 ttttagtttgacagaatttccaagttagtcctttaagtttc 36359948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 354 - 398
Target Start/End: Original strand, 45018004 - 45018048
Alignment:
Q  354 gaaatttaaaagactaacttggaaattttgtcaaactaaaaggac 398  Q
    |||| ||||| |||||||||| | |||||||||||||||||||||    
T  45018004 gaaacttaaaggactaacttgaagattttgtcaaactaaaaggac 45018048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 91; Significance: 6e-44; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 229 - 421
Target Start/End: Complemental strand, 31893493 - 31893291
Alignment:
Q  229 tcaaataagtctttttaatttgacagaatttgcaagttagttctttaagtttcaaa---------ctaaaagaacctattt-aaacttttgaaacagtga 318  Q
    ||||||||||| ||||| ||||||| ||||  ||||||||| ||||||||||||||         ||||||| |||||||| ||||||||||||| ||||    
T  31893493 tcaaataagtccttttagtttgacaaaattctcaagttagtcctttaagtttcaaaattttgaaactaaaaggacctatttgaaacttttgaaacggtga 31893394  T
Q  319 cgatgaaatagtttatcaactaaaatgacttatttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaac 418  Q
    |  |||||||||||||| ||||||||||| ||||||||| ||||||||||||||| | |||| ||||||||||||| ||||||| |||||||||||||||    
T  31893393 ctgtgaaatagtttatcgactaaaatgacctatttgaaacttaaaagactaacttaggaattctgtcaaactaaaatgacctaattgaaactttcgaaac 31893294  T
Q  419 tta 421  Q
    |||    
T  31893293 tta 31893291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 241 - 421
Target Start/End: Complemental strand, 34951458 - 34951268
Alignment:
Q  241 ttttaatttgacagaatttgcaagttagttctttaagtttcaaactaaaagaacctattt-aaacttttgaaacagtgacgatgaaatagtttatcaact 339  Q
    ||||| ||||||| ||||  |||||||||  ||||||||||||||||||| ||||||||| |||||||||||||||||||  ||||||||||||||||||    
T  34951458 ttttagtttgacacaattctcaagttagtcatttaagtttcaaactaaaaaaacctatttgaaacttttgaaacagtgacagtgaaatagtttatcaact 34951359  T
Q  340 aaaatgacttattt---------gaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    ||||||||||||||         |||| ||||| |||||||||   |||| |||||||| |||||||||||| ||||||||||||||||||    
T  34951358 aaaatgacttatttgaaacttttgaaacttaaaggactaacttaagaattatgtcaaacgaaaaggacctaattgaaactttcgaaactta 34951268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 275 - 399
Target Start/End: Original strand, 36566449 - 36566574
Alignment:
Q  275 aagtttcaaactaaaagaacctattt-aaacttttgaaacagtgacgatgaaatagtttatcaactaaaatgacttatttgaaatttaaaagactaactt 373  Q
    ||||||||||||||||| |||||||| ||||||||||||  |||||| |||||||||||||||||||||| ||| ||||||||| |||||||||||||||    
T  36566449 aagtttcaaactaaaaggacctatttgaaacttttgaaaaggtgacggtgaaatagtttatcaactaaaaagacatatttgaaacttaaaagactaactt 36566548  T
Q  374 ggaaattttgtcaaactaaaaggacc 399  Q
    ||||||| |||||||||||| |||||    
T  36566549 ggaaattctgtcaaactaaagggacc 36566574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 241 - 421
Target Start/End: Original strand, 19925232 - 19925421
Alignment:
Q  241 ttttaatttgacagaatttgcaagttagttctttaagtttcaaactaaaagaacctattt-aaacttttgaaacagtgacgatgaaatagtttatcaact 339  Q
    ||||| ||| ||||||||| ||||||||| |||||||||| |||||||||  |||||||| |||||||||||||||||| | ||||||||||||||||||    
T  19925232 ttttagtttaacagaatttccaagttagtcctttaagttt-aaactaaaaagacctatttgaaacttttgaaacagtgatggtgaaatagtttatcaact 19925330  T
Q  340 aaaatgactta---------tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
     ||| ||| ||         ||||||| ||||| ||||||||||| |||| |||||||||||||||| |||| | ||||||||| ||||||    
T  19925331 gaaaggacctatttgaaacttttgaaacttaaaggactaacttgggaattctgtcaaactaaaaggatctaattaaaactttcgcaactta 19925421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 322 - 418
Target Start/End: Original strand, 1441417 - 1441513
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaac 418  Q
    |||||||||||||||||||||| ||| ||||||||| ||||||||||||||||| |||| | ||||||||||| ||||||| |||||||||||||||    
T  1441417 tgaaatagtttatcaactaaaaggacctatttgaaacttaaaagactaacttgggaattctatcaaactaaaatgacctaattgaaactttcgaaac 1441513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 229 - 348
Target Start/End: Complemental strand, 33879524 - 33879405
Alignment:
Q  229 tcaaataagtctttttaatttgacagaatttgcaagttagttctttaagtttcaaactaaaagaacctatttaaa-cttttgaaacagtgacgatgaaat 327  Q
    ||||||| ||| ||||| || |||| ||||  ||||||||| ||| ||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||    
T  33879524 tcaaataggtccttttagttcgacataattcccaagttagtcctt-aagtttcaaactaaaaggacctatttaaaacttttgaaacagtgacggtgaaat 33879426  T
Q  328 agtttatcaactaaaatgact 348  Q
    |||||||||||||||||||||    
T  33879425 agtttatcaactaaaatgact 33879405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 322 - 412
Target Start/End: Original strand, 5559603 - 5559692
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaacttt 412  Q
    |||||||||| ||||||||||| ||||||||||||| ||||| ||||||||||| |||| ||||||||||||||||||||| |||||||||    
T  5559603 tgaaatagtt-atcaactaaaaagacttatttgaaacttaaaggactaacttgggaattctgtcaaactaaaaggacctaattgaaacttt 5559692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 322 - 421
Target Start/End: Original strand, 28256921 - 28257020
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    ||||||| ||||||||||||||| || ||||| ||| ||||| |||||||||| ||||||||||||||||||| ||||||| ||||| |||| |||||||    
T  28256921 tgaaataatttatcaactaaaataacatatttaaaacttaaaggactaacttgaaaattttgtcaaactaaaatgacctaattgaaattttcaaaactta 28257020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 325 - 415
Target Start/End: Original strand, 10620213 - 10620303
Alignment:
Q  325 aatagtttatcaactaaaatgacttatttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcga 415  Q
    |||| ||||||||||||||| |||||||||||| ||||| |||| ||||||||||| ||| ||||||||||| ||||| ||||||||||||    
T  10620213 aataatttatcaactaaaataacttatttgaaacttaaaggacttacttggaaattctgttaaactaaaagggcctaattgaaactttcga 10620303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 336 - 421
Target Start/End: Original strand, 31893474 - 31893559
Alignment:
Q  336 aactaaaatgacttatttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    |||||||| ||||||||||||| ||||| ||||||||||  |||| ||||||||||||||||||||| |||||||||  |||||||    
T  31893474 aactaaaaggacttatttgaaacttaaaggactaacttgagaattctgtcaaactaaaaggacctaattgaaacttttaaaactta 31893559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 322 - 421
Target Start/End: Complemental strand, 35214956 - 35214848
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttgaaattt---------aaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaacttt 412  Q
    |||||||||||||||||||||| ||| ||||||||||||         ||||||||||||||  |||| ||||||||||||||||||||| |||||||||    
T  35214956 tgaaatagtttatcaactaaaaagacctatttgaaatttttgaaacttaaaagactaacttgagaattctgtcaaactaaaaggacctaattgaaacttt 35214857  T
Q  413 cgaaactta 421  Q
     ||||||||    
T  35214856 tgaaactta 35214848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 323 - 421
Target Start/End: Complemental strand, 1346624 - 1346521
Alignment:
Q  323 gaaatagtttatcaactaaaatgactta-----tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaa 417  Q
    |||||||||||||||||||||  ||||      ||||||| ||||| |||||||||||||||| ||||||||||||||||  ||| ||||||||||||||    
T  1346624 gaaatagtttatcaactaaaagaacttgaaacttttgaaacttaaaggactaacttggaaattatgtcaaactaaaaggatttaattgaaactttcgaaa 1346525  T
Q  418 ctta 421  Q
    ||||    
T  1346524 ctta 1346521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 351 - 413
Target Start/End: Original strand, 31175970 - 31176032
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttc 413  Q
    ||||||| ||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  31175970 tttgaaacttaaaggactaacttggaaattctgtcaaactaaaaggacctaattgaaactttc 31176032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 351 - 421
Target Start/End: Original strand, 33879529 - 33879599
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    ||||||| ||||| || ||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||    
T  33879529 tttgaaacttaaaggattaacttggaaattctgtcaaattaaaaggacctaattgaaactttcgaaactta 33879599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 275 - 419
Target Start/End: Original strand, 21413037 - 21413190
Alignment:
Q  275 aagtttcaaactaaaagaacctatttaaa-cttttgaaacagtgacgatgaaatagtttatcaactaaaatgacttatttgaaatt--------taaaag 365  Q
    |||||| ||| |||||| ||||||||||| |||||||||| |||||| |||| |||||||| |||||||| ||| ||||||||| |        | |||     
T  21413037 aagttttaaattaaaaggacctatttaaaacttttgaaacggtgacggtgaagtagtttatgaactaaaaggacctatttgaaacttttgaaacttaaaa 21413136  T
Q  366 actaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaact 419  Q
    |||||||| |||||| ||||||| ||||||| ||||| ||||| ||||||||||    
T  21413137 actaacttagaaattctgtcaaattaaaagggcctaattgaaattttcgaaact 21413190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 322 - 421
Target Start/End: Complemental strand, 39958827 - 39958728
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    |||||||||||||||||||||| ||| ||||||||| ||||| || ||   ||| |||| ||||||||||||| ||| ||| |||||||||||| |||||    
T  39958827 tgaaatagtttatcaactaaaaggacctatttgaaacttaaaggattagaatgggaattctgtcaaactaaaatgacttaattgaaactttcgagactta 39958728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 275 - 411
Target Start/End: Original strand, 4187617 - 4187763
Alignment:
Q  275 aagtttcaaactaaaagaacctattt-aaacttttgaaacagtgacgatgaaatagtttatcaactaaaatgactta---------tttgaaatttaaaa 364  Q
    ||||||||||||||||  || ||||| ||||||||||||  |||| | |||||||||||||||||||||||||| ||         ||| |||||||||     
T  4187617 aagtttcaaactaaaatgacttatttgaaacttttgaaatggtgaaggtgaaatagtttatcaactaaaatgacctatttaaaacttttaaaatttaaag 4187716  T
Q  365 gactaacttggaaattttgtcaaactaaaaggacctaaatgaaactt 411  Q
    |||||||||| ||||| ||||||| |||||||| |||| | ||||||    
T  4187717 gactaacttgaaaattctgtcaaattaaaaggatctaattaaaactt 4187763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 351 - 421
Target Start/End: Complemental strand, 21412977 - 21412907
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    ||||||| ||||| |||||||||| ||||| |||||||||||||||| |||| |||||||||| |||||||    
T  21412977 tttgaaacttaaaggactaacttgaaaattctgtcaaactaaaaggatctaattgaaactttcaaaactta 21412907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 351 - 420
Target Start/End: Complemental strand, 19925215 - 19925147
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactt 420  Q
    ||||||| ||||| |||||| ||||||||| |||||||||||||||| |||| |||||||||||||||||    
T  19925215 tttgaaacttaaaggactaa-ttggaaattgtgtcaaactaaaaggatctaattgaaactttcgaaactt 19925147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 322 - 394
Target Start/End: Original strand, 42990993 - 42991064
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttgaaatttaaaagactaacttggaaattttgtcaaactaaaa 394  Q
    |||||||||||||||||||||| ||| ||||| |||||| ||||| ||||||| ||||| |||||||||||||    
T  42990993 tgaaatagtttatcaactaaaaagacctatttaaaattt-aaagattaacttgaaaattctgtcaaactaaaa 42991064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 322 - 421
Target Start/End: Original strand, 8040131 - 8040229
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    |||||||||| ||||||||||| ||| ||||||||| ||||| |||||||||||  ||| |||||| ||||||||| |||  ||||| ||| ||||||||    
T  8040131 tgaaatagttcatcaactaaaaggacctatttgaaacttaaaggactaacttgg-gattctgtcaagctaaaaggatctatttgaaatttttgaaactta 8040229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 318 - 412
Target Start/End: Complemental strand, 33235187 - 33235084
Alignment:
Q  318 acgatgaaatagtttatcaactaaaatgacttatttgaaa---------tttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaa 408  Q
    |||||||||||||||||||||||||||||| | |||||||         |||||| | ||||||||| |||| |||||||| |||||||||||| |||||    
T  33235187 acgatgaaatagtttatcaactaaaatgacctctttgaaacttttgaaatttaaaggtctaacttgggaattctgtcaaaccaaaaggacctaattgaaa 33235088  T
Q  409 cttt 412  Q
    ||||    
T  33235087 cttt 33235084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 351 - 421
Target Start/End: Complemental strand, 5805149 - 5805079
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    ||||||| ||||| || || ||||  |||| ||||||||||||||||||||| ||||||||||||||||||    
T  5805149 tttgaaacttaaaggaatagcttgagaattctgtcaaactaaaaggacctaattgaaactttcgaaactta 5805079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 351 - 421
Target Start/End: Original strand, 5805607 - 5805677
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    ||||||| |||||||| ||||||| |||||  |||||||||||||||| ||| |||||||||| |||||||    
T  5805607 tttgaaacttaaaagattaacttgaaaattcagtcaaactaaaaggacataattgaaactttcaaaactta 5805677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 351 - 421
Target Start/End: Complemental strand, 21433255 - 21433185
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    ||||||| ||||| ||||||||||| |||| | ||||||||||||||| ||| |||||| |||||||||||    
T  21433255 tttgaaacttaaatgactaacttgggaattctttcaaactaaaaggacttaattgaaacattcgaaactta 21433185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 351 - 421
Target Start/End: Original strand, 34951475 - 34951545
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    ||||||| ||||| |||| | || |||||| |||||||||||||||| |||| ||||||||||||||||||    
T  34951475 tttgaaacttaaaggactgatttagaaattgtgtcaaactaaaaggatctaattgaaactttcgaaactta 34951545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 322 - 418
Target Start/End: Original strand, 33235527 - 33235632
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttgaaattt---------aaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaacttt 412  Q
    |||||||||||||||||||||||||| |||||||| |||         ||| ||||||||||  ||||||||||||||||||||||| || | |||||||    
T  33235527 tgaaatagtttatcaactaaaatgacctatttgaagtttttgaaacttaaaggactaacttgataattttgtcaaactaaaaggaccaaattaaaacttt 33235626  T
Q  413 cgaaac 418  Q
    | ||||    
T  33235627 caaaac 33235632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 321 - 417
Target Start/End: Original strand, 35215298 - 35215403
Alignment:
Q  321 atgaaatagtttatcaactaaaatgacttatttg---------aaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactt 411  Q
    |||||||||||||||||||||||||| |||||||         ||| |||||||||||| ||||||||| ||||||| ||||| ||| ||| ||||| ||    
T  35215298 atgaaatagtttatcaactaaaatgagttatttgaaacttttaaaacttaaaagactaatttggaaattctgtcaaattaaaatgacttaattgaaattt 35215397  T
Q  412 tcgaaa 417  Q
    ||||||    
T  35215398 tcgaaa 35215403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 351 - 421
Target Start/End: Complemental strand, 5559220 - 5559149
Alignment:
Q  351 tttgaaatttaaaag-actaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    ||||||| ||||||| |||||||||| |||||| |||||||||||||| |||  ||||||||| ||||||||    
T  5559220 tttgaaacttaaaaggactaacttgggaattttatcaaactaaaaggatctatttgaaacttttgaaactta 5559149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 354 - 397
Target Start/End: Original strand, 35215400 - 35215443
Alignment:
Q  354 gaaatttaaaagactaacttggaaattttgtcaaactaaaagga 397  Q
    |||||||||| |||||||||| ||||||||||||||||||||||    
T  35215400 gaaatttaaaggactaacttgaaaattttgtcaaactaaaagga 35215443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 359 - 437
Target Start/End: Complemental strand, 40904794 - 40904711
Alignment:
Q  359 ttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactt-----actaacttgagaattat 437  Q
    ||||| |||||| ||| ||||| ||||||||||||||||||||| |||||||||  ||||||     |||||||||||||||||    
T  40904794 ttaaatgactaatttgaaaattatgtcaaactaaaaggacctaattgaaacttttaaaacttaaaagactaacttgagaattat 40904711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 241 - 300
Target Start/End: Complemental strand, 41020180 - 41020121
Alignment:
Q  241 ttttaatttgacagaatttgcaagttagttctttaagtttcaaactaaaagaacctattt 300  Q
    ||||| |||||||||||||  |||||| |||||||||||||||||||||| ||| |||||    
T  41020180 ttttagtttgacagaatttctaagttaattctttaagtttcaaactaaaataacatattt 41020121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 417
Target Start/End: Complemental strand, 1286481 - 1286415
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaa 417  Q
    ||||||| |||||||||||||||   |||| | ||||||||||||||||||| ||||||||| ||||    
T  1286481 tttgaaacttaaaagactaactttagaattctctcaaactaaaaggacctaattgaaacttttgaaa 1286415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 437
Target Start/End: Complemental strand, 8039741 - 8039683
Alignment:
Q  384 tcaaactaaaaggacctaaatgaaactttcgaaactt-----actaacttgagaattat 437  Q
    ||||||||||||||||||| |||||||||||||||||     |||||||||||||||||    
T  8039741 tcaaactaaaaggacctaattgaaactttcgaaacttaaagaactaacttgagaattat 8039683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 322 - 360
Target Start/End: Complemental strand, 20183918 - 20183880
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttgaaattt 360  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  20183918 tgaaataatttatcaactaaaatgacttatttgaaattt 20183880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 421
Target Start/End: Original strand, 22876867 - 22876937
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    ||||||| ||||| || |||||||  |||| ||||||||||||| ||| ||| ||||||||||||||||||    
T  22876867 tttgaaacttaaaggattaacttgagaattctgtcaaactaaaatgacttaattgaaactttcgaaactta 22876937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 421
Target Start/End: Complemental strand, 36566449 - 36566379
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    ||||||||||||| ||||||||||  |||||||||||||||||| ||| ||  ||||| ||| ||||||||    
T  36566449 tttgaaatttaaaggactaacttgagaattttgtcaaactaaaatgacttatttgaaaattttgaaactta 36566379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 229 - 290
Target Start/End: Complemental strand, 22876922 - 22876861
Alignment:
Q  229 tcaaataagtctttttaatttgacagaatttgcaagttagttctttaagtttcaaactaaaa 290  Q
    |||| |||||| ||||| ||||||||||||  ||||||| | ||||||||||||||||||||    
T  22876922 tcaattaagtcattttagtttgacagaattctcaagttaatcctttaagtttcaaactaaaa 22876861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 351 - 395
Target Start/End: Original strand, 1349225 - 1349269
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaag 395  Q
    ||||||| ||||||||||||||| |||||| ||||||||||||||    
T  1349225 tttgaaacttaaaagactaacttagaaattatgtcaaactaaaag 1349269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 359 - 399
Target Start/End: Original strand, 5559698 - 5559738
Alignment:
Q  359 ttaaaagactaacttggaaattttgtcaaactaaaaggacc 399  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  5559698 ttaaaggactaacttgggaattttgtcaaactaaaaggacc 5559738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 351 - 411
Target Start/End: Complemental strand, 10619911 - 10619851
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactt 411  Q
    ||||||| ||||| ||||||||||  |||| |||||||||||||| |||||| ||||||||    
T  10619911 tttgaaacttaaaggactaacttgacaattgtgtcaaactaaaagaacctaattgaaactt 10619851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 377 - 421
Target Start/End: Complemental strand, 20366133 - 20366089
Alignment:
Q  377 aattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    |||| ||||||||||||||||| ||| ||||||||||||||||||    
T  20366133 aattctgtcaaactaaaaggacataattgaaactttcgaaactta 20366089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 351 - 411
Target Start/End: Original strand, 31893438 - 31893498
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactt 411  Q
    ||||||| ||||| ||||||||||  |||||||||||||||||||||| ||  ||||||||    
T  31893438 tttgaaacttaaaggactaacttgagaattttgtcaaactaaaaggacttatttgaaactt 31893498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 365 - 421
Target Start/End: Original strand, 33879483 - 33879539
Alignment:
Q  365 gactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    ||||||||||| |||| |||| |||||||||||||||  ||||||||| ||||||||    
T  33879483 gactaacttgggaattatgtcgaactaaaaggacctatttgaaacttttgaaactta 33879539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 362 - 421
Target Start/End: Complemental strand, 36566379 - 36566319
Alignment:
Q  362 aaagactaacttgga-aattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    |||||||||||| || |||| ||||||||||||| ||||||| |||||||||| |||||||    
T  36566379 aaagactaactttgagaattctgtcaaactaaaatgacctaattgaaactttcaaaactta 36566319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 284
Target Start/End: Original strand, 21412934 - 21412977
Alignment:
Q  241 ttttaatttgacagaatttgcaagttagttctttaagtttcaaa 284  Q
    ||||| ||||||||||||| ||||||||| ||||||||||||||    
T  21412934 ttttagtttgacagaattttcaagttagtcctttaagtttcaaa 21412977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 322 - 357
Target Start/End: Complemental strand, 23150788 - 23150753
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttgaaa 357  Q
    ||||||||||||||||||||||||| ||||||||||    
T  23150788 tgaaatagtttatcaactaaaatgatttatttgaaa 23150753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 322 - 381
Target Start/End: Original strand, 28104641 - 28104700
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttgaaatttaaaagactaacttggaaattt 381  Q
    ||||||| |||||||||| ||||||||||||| ||| ||||| || ||||| ||||||||    
T  28104641 tgaaataatttatcaactgaaatgacttatttaaaacttaaaggaataactaggaaattt 28104700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 284
Target Start/End: Complemental strand, 31176013 - 31175970
Alignment:
Q  241 ttttaatttgacagaatttgcaagttagttctttaagtttcaaa 284  Q
    ||||| ||||||||||||| ||||||||| ||||||||||||||    
T  31176013 ttttagtttgacagaatttccaagttagtcctttaagtttcaaa 31175970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 284
Target Start/End: Complemental strand, 33879572 - 33879529
Alignment:
Q  241 ttttaatttgacagaatttgcaagttagttctttaagtttcaaa 284  Q
    ||||||||||||||||||| ||||||| | ||||||||||||||    
T  33879572 ttttaatttgacagaatttccaagttaatcctttaagtttcaaa 33879529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 351 - 397
Target Start/End: Complemental strand, 1441057 - 1441011
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaagga 397  Q
    ||||||| |||||| |||||||||| |||| ||||||||||||||||    
T  1441057 tttgaaacttaaaatactaacttgggaattctgtcaaactaaaagga 1441011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 359 - 421
Target Start/End: Complemental strand, 20101924 - 20101863
Alignment:
Q  359 ttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    ||||| |||||||||| |||| | ||| ||||||||||| |||| ||||||||||||||||||    
T  20101924 ttaaaggactaacttgaaaatct-gtcgaactaaaaggatctaattgaaactttcgaaactta 20101863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 351 - 397
Target Start/End: Complemental strand, 28256604 - 28256558
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaagga 397  Q
    ||||||||||||| ||||||||||  |||| ||||||||||||||||    
T  28256604 tttgaaatttaaaggactaacttgagaattctgtcaaactaaaagga 28256558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 351 - 421
Target Start/End: Original strand, 41020137 - 41020207
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    ||||||| |||||  | |||||| |||||| |||||||||||||||| |||| | |||||||| |||||||    
T  41020137 tttgaaacttaaagaattaacttagaaattctgtcaaactaaaaggatctaattaaaactttcaaaactta 41020207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 411
Target Start/End: Original strand, 23679554 - 23679603
Alignment:
Q  362 aaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactt 411  Q
    |||||||||||||  |||| |||||||||||||| |||||| ||||||||    
T  23679554 aaagactaacttgagaattctgtcaaactaaaagaacctaattgaaactt 23679603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 322 - 355
Target Start/End: Complemental strand, 27995210 - 27995177
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttga 355  Q
    ||||||||||||||||||||||| ||||||||||    
T  27995210 tgaaatagtttatcaactaaaattacttatttga 27995177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 412
Target Start/End: Original strand, 39959207 - 39959268
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaacttt 412  Q
    ||||||| ||||| || ||||||||||||| |||||||||||||| | |||  |||||||||    
T  39959207 tttgaaacttaaatgattaacttggaaattctgtcaaactaaaagaatctatttgaaacttt 39959268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 351 - 399
Target Start/End: Original strand, 8040219 - 8040267
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacc 399  Q
    ||||||| |||||||||||| |||||||||  || ||||||||||||||    
T  8040219 tttgaaacttaaaagactaatttggaaattccgttaaactaaaaggacc 8040267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 351 - 399
Target Start/End: Original strand, 20366611 - 20366659
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacc 399  Q
    ||||||| ||||| |||||||||||||||| |||  |||||||||||||    
T  20366611 tttgaaacttaaaggactaacttggaaattctgtttaactaaaaggacc 20366659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 351 - 411
Target Start/End: Original strand, 21433348 - 21433408
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactt 411  Q
    ||||||| ||||| || |||||||| |||| ||||||||||||| ||| ||| ||||||||    
T  21433348 tttgaaacttaaaggattaacttgggaattctgtcaaactaaaatgacgtaattgaaactt 21433408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 399
Target Start/End: Complemental strand, 23150686 - 23150642
Alignment:
Q  355 aaatttaaaagactaacttggaaattttgtcaaactaaaaggacc 399  Q
    ||||||||| ||||||||||  |||| ||||||||||||||||||    
T  23150686 aaatttaaaggactaacttgagaattatgtcaaactaaaaggacc 23150642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 351 - 399
Target Start/End: Complemental strand, 27995112 - 27995064
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacc 399  Q
    ||||||| |||||| |||||||||  |||| ||||||||||||||||||    
T  27995112 tttgaaacttaaaacactaacttgagaattctgtcaaactaaaaggacc 27995064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 359 - 399
Target Start/End: Original strand, 31893557 - 31893597
Alignment:
Q  359 ttaaaagactaacttggaaattttgtcaaactaaaaggacc 399  Q
    ||||| ||||||||| |||||| ||||||||||||||||||    
T  31893557 ttaaaggactaacttagaaattctgtcaaactaaaaggacc 31893597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 281
Target Start/End: Complemental strand, 34951582 - 34951538
Alignment:
Q  237 gtctttttaatttgacagaatttgcaagttagttctttaagtttc 281  Q
    ||||||||| ||||||||||||  ||||||||| |||||||||||    
T  34951582 gtctttttagtttgacagaattatcaagttagtcctttaagtttc 34951538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 85; Significance: 2e-40; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 247 - 421
Target Start/End: Original strand, 31264058 - 31264242
Alignment:
Q  247 tttgacagaatttgcaagttagttctttaagtttcaaactaaaagaacctattt-aaacttttgaaacagtgacgatgaaatagtttatcaactaaaatg 345  Q
    ||||||||||||  ||||||||| ||||||||||||||||||||| |||||||| ||||||||||||  |||||| |||||||||||||||||||||| |    
T  31264058 tttgacagaattcccaagttagtactttaagtttcaaactaaaaggacctatttgaaacttttgaaagggtgacggtgaaatagtttatcaactaaaagg 31264157  T
Q  346 actta---------tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    || ||         ||||||| |||||  ||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||    
T  31264158 acctatttgaaacttttgaaacttaaataactaacttggaaattctgtcaaactaaaaggacttaattgaaactttcgaaactta 31264242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 278 - 421
Target Start/End: Original strand, 41265183 - 41265328
Alignment:
Q  278 tttcaaactaaaagaacctattt-aaacttttgaaacagtgac-gatgaaatagtttatcaactaaaatgacttatttgaaatttaaaagactaacttgg 375  Q
    |||||||||||||| || ||||| |||| ||||||||  |||| | |||||||||||||||||||||||||||||||||||| ||||| ||||||||||     
T  41265183 tttcaaactaaaaggacatatttgaaacatttgaaacgatgaccggtgaaatagtttatcaactaaaatgacttatttgaaacttaaaggactaacttga 41265282  T
Q  376 aaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
     |||| ||||||| ||| ||||| ||| ||||||||||||||||||    
T  41265283 gaattctgtcaaattaagaggacataattgaaactttcgaaactta 41265328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 275 - 420
Target Start/End: Complemental strand, 39376360 - 39376215
Alignment:
Q  275 aagtttcaaactaaaagaacctattt-aaacttttgaaacagtgacgatgaaatagtttatcaactaaaatgacttatttgaaatttaaaagactaactt 373  Q
    |||| |||||||||||| | |||||| |||||||||||||| ||| | |||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  39376360 aagtctcaaactaaaaggatctatttgaaacttttgaaacaatgatggtgaaatagtttatcaactaaaaagacttatttgaaattt-aaagactaactt 39376262  T
Q  374 ggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactt 420  Q
     | ||||  || |||||||||||| |||  |||||||||| ||||||    
T  39376261 aggaattccgtaaaactaaaaggatctagttgaaactttcaaaactt 39376215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 276 - 398
Target Start/End: Complemental strand, 21813332 - 21813209
Alignment:
Q  276 agtttcaaactaaaagaacctatttaaa-cttttgaaacagtgacgatgaaatagtttatcaactaaaatgacttatttgaaatttaaaagactaacttg 374  Q
    |||||||||||||||| ||||||||||| |||||||||  |||||| |||||||||||||||||||||| ||| | ||||||| ||||| ||||||||||    
T  21813332 agtttcaaactaaaaggacctatttaaaacttttgaaatggtgacggtgaaatagtttatcaactaaaaggacctttttgaaacttaaaggactaacttg 21813233  T
Q  375 gaaattttgtcaaactaaaaggac 398  Q
      |||| | |||||||||||||||    
T  21813232 agaattctatcaaactaaaaggac 21813209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 241 - 421
Target Start/End: Original strand, 16780946 - 16781132
Alignment:
Q  241 ttttaatttgacagaatttgcaagttagttctttaagtttcaaactaaaagaacctattt-aaacttttgaaacagtgacgatgaaatagtttatca--- 336  Q
    |||||||| |||||||||| ||||||||| |||||||||||||| |||||| || ||||| |||||||||||||||||| | | |||||||| ||||       
T  16780946 ttttaattcgacagaattttcaagttagtcctttaagtttcaaattaaaaggacttatttgaaacttttgaaacagtgatggtaaaatagttcatcataa 16781045  T
Q  337 --actaaaatgacttatttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
       |  || |||    ||||||||||||| ||||||||||  |||||||||||||||||||||||||| | |||||||| |||||||    
T  16781046 gggcctaattgaaacttttgaaatttaaaggactaacttgtgaattttgtcaaactaaaaggacctaattaaaactttcaaaactta 16781132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 322 - 421
Target Start/End: Original strand, 36196479 - 36196587
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttgaaattt---------aaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaacttt 412  Q
    |||||||||||||||||||||||||| ||||||||| ||         ||| |||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  36196479 tgaaatagtttatcaactaaaatgacctatttgaaacttttgaaactcaaatgactaacttggaaattctgtcaaactaaaaagacctaattgaaacttt 36196578  T
Q  413 cgaaactta 421  Q
    |||||||||    
T  36196579 cgaaactta 36196587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 336 - 411
Target Start/End: Complemental strand, 5116970 - 5116895
Alignment:
Q  336 aactaaaatgacttatttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactt 411  Q
    |||||||||||||||||||||| ||||| |||||| ||  ||||||||||||||||||||||||||| ||||||||    
T  5116970 aactaaaatgacttatttgaaacttaaaggactaatttaaaaattttgtcaaactaaaaggacctaattgaaactt 5116895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 322 - 421
Target Start/End: Original strand, 20535938 - 20536037
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    |||||||||||||||||||| | ||||||||||||| ||||||||||||||||  |||| ||||||||||||| ||  ||| | ||||||||| ||||||    
T  20535938 tgaaatagtttatcaactaacaagacttatttgaaacttaaaagactaacttgagaattatgtcaaactaaaatgatataattaaaactttcgtaactta 20536037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 322 - 417
Target Start/End: Complemental strand, 27893174 - 27893079
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaa 417  Q
    |||||||||||||||||||||| ||| ||||||||| ||||| ||||||||||| |||  ||||||||||||| ||  ||| ||||||||||||||    
T  27893174 tgaaatagtttatcaactaaaaagacctatttgaaacttaaaggactaacttgggaatactgtcaaactaaaaagatataattgaaactttcgaaa 27893079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 336 - 421
Target Start/End: Complemental strand, 37543072 - 37542987
Alignment:
Q  336 aactaaaatgacttatttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    |||||||||||| | ||||||| ||||| |||||||||||||||| ||||||||||||| ||| ||| | ||||||||||||||||    
T  37543072 aactaaaatgacctgtttgaaacttaaaggactaacttggaaattatgtcaaactaaaatgacttaattaaaactttcgaaactta 37542987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 351 - 421
Target Start/End: Complemental strand, 30907184 - 30907114
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    ||||||| ||||| ||||||||||  |||| ||||||||||||||||||||| ||||||||||||||||||    
T  30907184 tttgaaacttaaaggactaacttgagaattatgtcaaactaaaaggacctaattgaaactttcgaaactta 30907114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 351 - 421
Target Start/End: Complemental strand, 31264035 - 31263965
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    ||||||| ||||| ||||||||||  |||| ||||||||||||||||||||| ||||||||||||||||||    
T  31264035 tttgaaacttaaaggactaacttgagaattctgtcaaactaaaaggacctaattgaaactttcgaaactta 31263965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 229 - 421
Target Start/End: Complemental strand, 34336282 - 34336075
Alignment:
Q  229 tcaaataagtctttttaatttgacagaatttgcaagttagttctttaagtttcaaa-ct--aaaaga--acctattt-aaacttttgaaacagtgacgat 322  Q
    ||||||||||| || || ||||||||||||| ||||||| |  ||||||||||||| ||  |||  |  |||||||| ||||||||||||| |||| | |    
T  34336282 tcaaataagtccttgtagtttgacagaattttcaagttaatcttttaagtttcaaaacttcaaactatgacctatttgaaacttttgaaacggtgatggt 34336183  T
Q  323 gaaatagtttatcaactaaaatgacttattt---------gaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttc 413  Q
    |||||||||||| |||||||| ||| |||||         |||| ||||| ||||||||||| |||| ||||||||||||| ||| ||| ||||||||||    
T  34336182 gaaatagtttattaactaaaaagacctatttaaaacttttgaaacttaaaggactaacttgggaattctgtcaaactaaaatgacataattgaaactttc 34336083  T
Q  414 gaaactta 421  Q
     |||||||    
T  34336082 aaaactta 34336075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 318 - 421
Target Start/End: Original strand, 27893532 - 27893644
Alignment:
Q  318 acgatgaaatagtttatcaactaaaatgacttatttgaaattt---------aaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaa 408  Q
    |||||||||||||||||||||||||||||  ||||||||| ||         ||| ||||||||||| |||| |||||||||||||| |||||| |||||    
T  27893532 acgatgaaatagtttatcaactaaaatgatctatttgaaacttttgaaacttaaaggactaacttgggaattctgtcaaactaaaagaacctaattgaaa 27893631  T
Q  409 ctttcgaaactta 421  Q
    ||| |||||||||    
T  27893632 cttacgaaactta 27893644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 275 - 421
Target Start/End: Original strand, 30907244 - 30907398
Alignment:
Q  275 aagtttcaaactaaaagaacctattt-aaacttttgaaacagtgacgatgaaatagtttatcaactaaaatgacttatttgaaattt---------aaaa 364  Q
    ||||||||||||||||| || ||||| ||||||||||||| ||||||  |||||| |||||||    ||||||||||||||||| ||         |||     
T  30907244 aagtttcaaactaaaaggacatatttgaaacttttgaaacggtgacggcgaaataatttatcat---aaatgacttatttgaaacttttgaaacttaaag 30907340  T
Q  365 gactaacttggaaattttgtcaaact-aaaaggacctaaatgaaactttcgaaactta 421  Q
    ||||||||||  |||| | ||||||| |||||||||||| ||||||||||||||||||    
T  30907341 gactaacttgagaattctttcaaacttaaaaggacctaattgaaactttcgaaactta 30907398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 351 - 421
Target Start/End: Complemental strand, 19080739 - 19080669
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    ||||||| ||||| | |||||||| ||||| ||||||||||||| ||||||| |||||||||| |||||||    
T  19080739 tttgaaacttaaatgtctaacttgaaaattctgtcaaactaaaatgacctaattgaaactttcaaaactta 19080669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 359 - 421
Target Start/End: Original strand, 37543101 - 37543163
Alignment:
Q  359 ttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    ||||| ||||| |||||||||| ||||||||||||||||| ||| |||||||||| |||||||    
T  37543101 ttaaaggactaccttggaaattatgtcaaactaaaaggacttaattgaaactttcaaaactta 37543163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 322 - 394
Target Start/End: Original strand, 39301808 - 39301880
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttgaaatttaaaagactaacttggaaattttgtcaaactaaaa 394  Q
    |||||||||||||||||||||||| | ||||||||| |||||  | ||||||  ||||| |||||||||||||    
T  39301808 tgaaatagtttatcaactaaaatggcctatttgaaacttaaagaaataacttaaaaattctgtcaaactaaaa 39301880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 237 - 285
Target Start/End: Complemental strand, 39376467 - 39376419
Alignment:
Q  237 gtctttttaatttgacagaatttgcaagttagttctttaagtttcaaac 285  Q
    |||||||||| |||||||||||| ||||||||| |||||||||||||||    
T  39376467 gtctttttaaattgacagaatttccaagttagtcctttaagtttcaaac 39376419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 351 - 437
Target Start/End: Complemental strand, 30907244 - 30907153
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactt-----actaacttgagaattat 437  Q
    ||||||| ||||| ||||||||||| |||| |||||| ||||||||| |||  ||||||||| |||||||     |||||||||||||||||    
T  30907244 tttgaaacttaaatgactaacttgggaattatgtcaatctaaaaggatctatttgaaacttttgaaacttaaaggactaacttgagaattat 30907153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 229 - 284
Target Start/End: Complemental strand, 31264227 - 31264172
Alignment:
Q  229 tcaaataagtctttttaatttgacagaatttgcaagttagttctttaagtttcaaa 284  Q
    |||| |||||| ||||| ||||||||||||| |||||||||| |||||||||||||    
T  31264227 tcaattaagtccttttagtttgacagaatttccaagttagttatttaagtttcaaa 31264172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 417
Target Start/End: Original strand, 34336287 - 34336353
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaa 417  Q
    |||||||||||||  ||||| |||  |||||||||||| ||||||||| ||| ||||||||||||||    
T  34336287 tttgaaatttaaagaactaatttgagaattttgtcaaattaaaaggacttaactgaaactttcgaaa 34336353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 417
Target Start/End: Complemental strand, 34429791 - 34429725
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaa 417  Q
    ||||||| ||||| || ||||||||||||| | ||||| ||||||||||||| ||||| ||||||||    
T  34429791 tttgaaacttaaaggattaacttggaaattctttcaaattaaaaggacctaattgaaattttcgaaa 34429725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 421
Target Start/End: Original strand, 39376420 - 39376490
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    ||||||| ||||| |||||||||||||||| ||||||  ||||| |||||||   ||||||||||||||||    
T  39376420 tttgaaacttaaaggactaacttggaaattctgtcaatttaaaaagacctaatcaaaactttcgaaactta 39376490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 322 - 357
Target Start/End: Complemental strand, 20535591 - 20535556
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttgaaa 357  Q
    |||||||||||||||||||||||||| |||||||||    
T  20535591 tgaaatagtttatcaactaaaatgacctatttgaaa 20535556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 234 - 285
Target Start/End: Original strand, 37543007 - 37543058
Alignment:
Q  234 taagtctttttaatttgacagaatttgcaagttagttctttaagtttcaaac 285  Q
    |||||| ||||| ||||||| ||||| ||||||||| |||||||||||||||    
T  37543007 taagtcattttagtttgacataatttccaagttagtcctttaagtttcaaac 37543058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 351 - 421
Target Start/End: Complemental strand, 8260495 - 8260425
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    ||||||| |||||||| ||| |||  || | ||||||||||||| || |||| ||||||||||||||||||    
T  8260495 tttgaaaattaaaagagtaatttgagaactctgtcaaactaaaatgatctaattgaaactttcgaaactta 8260425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 359 - 397
Target Start/End: Original strand, 13315809 - 13315847
Alignment:
Q  359 ttaaaagactaacttggaaattttgtcaaactaaaagga 397  Q
    ||||| |||||||||||||||| ||||||||||||||||    
T  13315809 ttaaaggactaacttggaaattatgtcaaactaaaagga 13315847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 284
Target Start/End: Complemental strand, 39301883 - 39301837
Alignment:
Q  238 tctttttaatttgacagaatttgcaagttagttctttaagtttcaaa 284  Q
    |||||||| |||||||||||||  |||||| ||||||||||||||||    
T  39301883 tctttttagtttgacagaatttttaagttatttctttaagtttcaaa 39301837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 27893637 - 27893682
Alignment:
Q  354 gaaatttaaaagactaacttggaaattttgtcaaactaaaaggacc 399  Q
    |||| ||||| ||||||||||  |||||||||||||||||||||||    
T  27893637 gaaacttaaaggactaacttgagaattttgtcaaactaaaaggacc 27893682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 34429728 - 34429683
Alignment:
Q  354 gaaatttaaaagactaacttggaaattttgtcaaactaaaaggacc 399  Q
    |||||||||| ||||||||||  |||| ||||||||||||||||||    
T  34429728 gaaatttaaaggactaacttgagaattctgtcaaactaaaaggacc 34429683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 284
Target Start/End: Complemental strand, 41265299 - 41265258
Alignment:
Q  243 ttaatttgacagaatttgcaagttagttctttaagtttcaaa 284  Q
    ||||||||||||||||  ||||||||| ||||||||||||||    
T  41265299 ttaatttgacagaattctcaagttagtcctttaagtttcaaa 41265258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 281
Target Start/End: Original strand, 31263928 - 31263972
Alignment:
Q  237 gtctttttaatttgacagaatttgcaagttagttctttaagtttc 281  Q
    ||||||||| ||||||||||||| ||||||| | |||||||||||    
T  31263928 gtctttttagtttgacagaatttccaagttaatcctttaagtttc 31263972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 359 - 395
Target Start/End: Original strand, 37543161 - 37543197
Alignment:
Q  359 ttaaaagactaacttggaaattttgtcaaactaaaag 395  Q
    |||||||||||||||| ||||| ||||||||||||||    
T  37543161 ttaaaagactaacttgaaaattctgtcaaactaaaag 37543197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 9e-34; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 229 - 352
Target Start/End: Original strand, 36890527 - 36890652
Alignment:
Q  229 tcaaataagtc-tttttaatttgacagaatttgcaagttagttctttaagtttcaaactaaaagaacctattt-aaacttttgaaacagtgacgatgaaa 326  Q
    ||||||||||| |||||||||||||| ||||| ||||||||| ||||||||||||||||||||  || ||||| ||||||||||||| |||||| |||||    
T  36890527 tcaaataagtcatttttaatttgacataatttccaagttagtcctttaagtttcaaactaaaatgacatatttgaaacttttgaaacggtgacggtgaaa 36890626  T
Q  327 tagtttatcaactaaaatgacttatt 352  Q
    ||||||||||||||||||||| ||||    
T  36890627 tagtttatcaactaaaatgacctatt 36890652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 229 - 421
Target Start/End: Complemental strand, 43098420 - 43098223
Alignment:
Q  229 tcaaataagtctttttaatttgacagaatttgcaagttagttctttaagtttcaaactaaaagaacctattt-aaacttttgaaacagtgacgatgaaat 327  Q
    ||||||| ||| ||||| ||| ||||||||  ||||||||| ||||||||||||||||||||  | |||||| ||||||||| ||| ||||   ||||||    
T  43098420 tcaaatatgtcattttagtttaacagaattcccaagttagtcctttaagtttcaaactaaaatgatctatttgaaacttttg-aacggtgatcgtgaaat 43098322  T
Q  328 agtttatcaactaaaatgacttatttgaaa--tttaaaa---gactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    |||||||||||||||| |||||||||||||  ||| |||   ||||||||| | || | ||  ||||||||||||||||| |||||||||| |||||||    
T  43098321 agtttatcaactaaaaggacttatttgaaacttttgaaacttgactaacttcggaactctggtaaactaaaaggacctaattgaaactttcaaaactta 43098223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 275 - 421
Target Start/End: Original strand, 26329874 - 26330030
Alignment:
Q  275 aagtttcaaactaaaagaacctattt-aaacttttgaaacagtgacgatgaaatagtttatcaactaaaatgactta---------tttgaaatttaaaa 364  Q
    ||||||||||||||||| || ||||| ||||||||||||  |||||  |||||||||||||||||||||||||| ||         ||||||| |||||     
T  26329874 aagtttcaaactaaaaggacttatttgaaacttttgaaatggtgacagtgaaatagtttatcaactaaaatgacctatttgaaacttttgaaacttaaat 26329973  T
Q  365 gactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    ||||||||||| |||| ||||||||||||||||||||  ||||||||| ||||||||    
T  26329974 gactaacttgggaattatgtcaaactaaaaggacctatttgaaacttttgaaactta 26330030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 16 - 157
Target Start/End: Original strand, 6921827 - 6921984
Alignment:
Q  16 aataaagctgtcaatttgagccaatccgatgcacaacacaagggaaggcttattttgaatttatgccagacct----------------gcatgacattg 99  Q
    ||||||||||||||||||||| |||||| |||||||| ||||||| |||| ||||||||||||||| ||||||                 ||||||||||    
T  6921827 aataaagctgtcaatttgagctaatccggtgcacaactcaagggatggctcattttgaatttatgcaagaccttcatatgtagatttaatcatgacattg 6921926  T
Q  100 cgttatgaactcttgtaatgttatggaaaattattctattaatggaataaagtaagtg 157  Q
    || |||||||||||||| | |||| ||||| |||||||||||||||||||||||||||    
T  6921927 cgctatgaactcttgtattattatagaaaaatattctattaatggaataaagtaagtg 6921984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 324 - 421
Target Start/End: Complemental strand, 19631905 - 19631804
Alignment:
Q  324 aaatagtttatcaactaaaatgacttatttgaaatttaaaagactaa----cttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaact 419  Q
    |||||||||||||||||||||||| ||||||||| ||||| ||||||    ||||  |||| ||||||||||||||||||||| ||||||||||||||||    
T  19631905 aaatagtttatcaactaaaatgacctatttgaaacttaaaggactaattaacttgagaattctgtcaaactaaaaggacctaattgaaactttcgaaact 19631806  T
Q  420 ta 421  Q
    ||    
T  19631805 ta 19631804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 322 - 398
Target Start/End: Original strand, 44916295 - 44916371
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggac 398  Q
    ||||||||||||||||||||||| || ||||||||| ||||| |||||||||| |||||||||||||||||||||||    
T  44916295 tgaaatagtttatcaactaaaataacctatttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggac 44916371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 322 - 421
Target Start/End: Original strand, 52183408 - 52183507
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    |||||||||||||||||| |||  |||||||||||| ||||| ||||  ||||| |||| ||||||||||||||| ||||| ||||||||||||||||||    
T  52183408 tgaaatagtttatcaacttaaaaaacttatttgaaacttaaaggactggcttgggaattctgtcaaactaaaagggcctaattgaaactttcgaaactta 52183507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 351 - 421
Target Start/End: Original strand, 43098425 - 43098495
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    ||||||| ||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  43098425 tttgaaacttaaaggactaacttgggaattttgtcaaactaaaaggacctaattgaaactttcgaaactta 43098495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 322 - 395
Target Start/End: Original strand, 30543112 - 30543185
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttgaaatttaaaagactaacttggaaattttgtcaaactaaaag 395  Q
    |||||||||||||||| |||||||| |||||||||||||||| ||||||||||  |||||||||||||||||||    
T  30543112 tgaaatagtttatcaattaaaatgatttatttgaaatttaaaggactaacttgataattttgtcaaactaaaag 30543185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 351 - 420
Target Start/End: Complemental strand, 26329874 - 26329805
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactt 420  Q
    ||||||| ||||| | |||||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  26329874 tttgaaacttaaagggctaacttggaaattctgtcaaactaaaaggacctaattgaaactttcgaaactt 26329805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 322 - 421
Target Start/End: Complemental strand, 52866096 - 52865997
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    |||||||||||||||||||||||||| ||||||||| ||||| |||||  |||   |||||||||||||||||| || ||| | |||||||| |||||||    
T  52866096 tgaaatagtttatcaactaaaatgacctatttgaaacttaaaggactagattgagcattttgtcaaactaaaagaacataatttaaactttcaaaactta 52865997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 351 - 421
Target Start/End: Complemental strand, 41735923 - 41735853
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    ||||||||||||| |||| ||||||||||| ||||||||||||||||||||  ||||||||| ||||||||    
T  41735923 tttgaaatttaaaggactgacttggaaattctgtcaaactaaaaggacctatttgaaacttttgaaactta 41735853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 276 - 420
Target Start/End: Complemental strand, 22025249 - 22025095
Alignment:
Q  276 agtttcaaactaaaagaacctattt-aaacttttgaaacagtgacgatgaaatagtttatcaactaaaatgacttatttgaaa---tttaa----aa--g 365  Q
    |||||||||||||||| | |||||| ||||||||||||| || ||| ||||||||||||||||||||||  || |||||||||   |||||    ||  |    
T  22025249 agtttcaaactaaaaggagctatttgaaacttttgaaacggttacggtgaaatagtttatcaactaaaagaacctatttgaaactttttaatcttaacgg 22025150  T
Q  366 actaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactt 420  Q
    ||||||||   |||| ||||||||||||| ||||||| ||||||||||| |||||    
T  22025149 actaacttaagaattctgtcaaactaaaatgacctaattgaaactttcgtaactt 22025095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 359 - 420
Target Start/End: Original strand, 22025322 - 22025383
Alignment:
Q  359 ttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactt 420  Q
    ||||| ||||||||||| |||| |||||||||||||| |||||| |||||||||||||||||    
T  22025322 ttaaaggactaacttgggaattctgtcaaactaaaagaacctaattgaaactttcgaaactt 22025383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 366 - 421
Target Start/End: Complemental strand, 2788886 - 2788831
Alignment:
Q  366 actaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    |||||||||  |||| ||||||||||||||||||||| ||||||||||||||||||    
T  2788886 actaacttgagaattctgtcaaactaaaaggacctaattgaaactttcgaaactta 2788831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 229 - 300
Target Start/End: Complemental strand, 2788983 - 2788912
Alignment:
Q  229 tcaaataagtctttttaatttgacagaatttgcaagttagttctttaagtttcaaactaaaagaacctattt 300  Q
    ||||||| ||| ||||| ||||||||||||  |||||||||  |||||||||||||||||||| ||||||||    
T  2788983 tcaaataggtcattttagtttgacagaattctcaagttagtcatttaagtttcaaactaaaaggacctattt 2788912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 336 - 399
Target Start/End: Complemental strand, 8408417 - 8408354
Alignment:
Q  336 aactaaaatgacttatttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacc 399  Q
    |||||||| ||  ||||||||| |||||  ||||||||||||||||||||||||||||||||||    
T  8408417 aactaaaaggatctatttgaaacttaaagaactaacttggaaattttgtcaaactaaaaggacc 8408354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 229 - 300
Target Start/End: Original strand, 41735868 - 41735939
Alignment:
Q  229 tcaaataagtctttttaatttgacagaatttgcaagttagttctttaagtttcaaactaaaagaacctattt 300  Q
    ||||||| ||| ||||| ||||||||||||| ||||| ||| |||||| |||||||||||||| ||||||||    
T  41735868 tcaaataggtccttttagtttgacagaatttccaagtcagtcctttaaatttcaaactaaaaggacctattt 41735939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 351 - 421
Target Start/End: Original strand, 2788988 - 2789058
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    ||||||| ||||| |||||||||| ||||| ||||||||||||| ||||||| |||||||| | |||||||    
T  2788988 tttgaaacttaaaggactaacttgaaaattctgtcaaactaaaatgacctaattgaaacttccaaaactta 2789058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 351 - 421
Target Start/End: Complemental strand, 2909286 - 2909216
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    ||||||||||||| ||||||||||  |||| ||| |||||||||| |||||| ||| ||||||||||||||    
T  2909286 tttgaaatttaaaggactaacttgagaattctgtaaaactaaaagaacctaattgacactttcgaaactta 2909216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 351 - 421
Target Start/End: Complemental strand, 9320121 - 9320051
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    ||||||||||||| |||||| |||  |||| |||||||||||||| || ||| ||||||||||||||||||    
T  9320121 tttgaaatttaaatgactaaattgagaattctgtcaaactaaaagaacttaattgaaactttcgaaactta 9320051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 351 - 421
Target Start/End: Original strand, 26330020 - 26330090
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    ||||||| ||||| ||||||||||| |||| ||| |||||||||||| |||| |||||||||| |||||||    
T  26330020 tttgaaacttaaaggactaacttgggaattctgtaaaactaaaaggatctaattgaaactttcaaaactta 26330090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 351 - 421
Target Start/End: Complemental strand, 31229366 - 31229296
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    ||||||| ||||| ||||||||||  |||| | ||||||||||| ||||||| ||||||||||||||||||    
T  31229366 tttgaaacttaaatgactaacttgagaattctatcaaactaaaaagacctaagtgaaactttcgaaactta 31229296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 331 - 395
Target Start/End: Original strand, 52866347 - 52866411
Alignment:
Q  331 ttatcaactaaaatgacttatttgaaatttaaaagactaacttggaaattttgtcaaactaaaag 395  Q
    ||||||||||||| ||| | ||||||| ||||| ||||||||||| |||| ||||||||||||||    
T  52866347 ttatcaactaaaaggacatttttgaaacttaaaggactaacttgggaattctgtcaaactaaaag 52866411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 351 - 437
Target Start/End: Original strand, 8408873 - 8408964
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactt-----actaacttgagaattat 437  Q
    ||||||| ||||| |||||||||| ||||| |||||||||||||| || | | ||||| |||||||||||     |||||||||||||||||    
T  8408873 tttgaaacttaaatgactaacttgaaaattctgtcaaactaaaagaacatcattgaaattttcgaaacttaaatgactaacttgagaattat 8408964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 421
Target Start/End: Original strand, 2788928 - 2788998
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    ||||||| ||||| ||||||||||  |||| ||||||||||||| ||||||  ||||||||| ||||||||    
T  2788928 tttgaaacttaaatgactaacttgagaattctgtcaaactaaaatgacctatttgaaacttttgaaactta 2788998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 322 - 411
Target Start/End: Complemental strand, 8408491 - 8408393
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttg---------aaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactt 411  Q
    |||||||| ||||||||||||||||||||||||         ||| |||||||||| |||||  ||||||||||||||||||||| |||  ||||||||    
T  8408491 tgaaatagcttatcaactaaaatgacttatttgaaacttttcaaacttaaaagacttacttgagaattttgtcaaactaaaaggatctatttgaaactt 8408393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 421
Target Start/End: Complemental strand, 35046539 - 35046469
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    ||||||| ||||| |||||| || | |||| |||||||||||||||| |||| | ||||||||||||||||    
T  35046539 tttgaaacttaaaggactaatttaggaattctgtcaaactaaaaggatctaattaaaactttcgaaactta 35046469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 421
Target Start/End: Original strand, 35046560 - 35046630
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    ||||||| ||||| ||||||||||| |||| ||||||||||||| | || || | ||||||||||||||||    
T  35046560 tttgaaacttaaaggactaacttgggaattatgtcaaactaaaatggccaaattaaaactttcgaaactta 35046630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 413
Target Start/End: Complemental strand, 52181826 - 52181764
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttc 413  Q
    ||||||| ||||| ||||||||||| |||| ||||||||||||||||| | | ||||||||||    
T  52181826 tttgaaacttaaaggactaacttgggaattctgtcaaactaaaaggacatgattgaaactttc 52181764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 336 - 388
Target Start/End: Original strand, 35024029 - 35024081
Alignment:
Q  336 aactaaaatgacttatttgaaatttaaaagactaacttggaaattttgtcaaa 388  Q
    |||||||| ||| || ||||||||||||||||||||||  |||||||||||||    
T  35024029 aactaaaaagacataattgaaatttaaaagactaacttaaaaattttgtcaaa 35024081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 359 - 399
Target Start/End: Complemental strand, 43098225 - 43098185
Alignment:
Q  359 ttaaaagactaacttggaaattttgtcaaactaaaaggacc 399  Q
    ||||| ||||||||| |||||||||||||||||||||||||    
T  43098225 ttaaaggactaacttagaaattttgtcaaactaaaaggacc 43098185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 284
Target Start/End: Complemental strand, 2789031 - 2788988
Alignment:
Q  241 ttttaatttgacagaatttgcaagttagttctttaagtttcaaa 284  Q
    ||||| ||||||||||||| ||||||||| ||||||||||||||    
T  2789031 ttttagtttgacagaattttcaagttagtcctttaagtttcaaa 2788988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 284
Target Start/End: Original strand, 8408359 - 8408402
Alignment:
Q  241 ttttaatttgacagaatttgcaagttagttctttaagtttcaaa 284  Q
    ||||| ||||||| ||||| ||||||||||||||||||||||||    
T  8408359 ttttagtttgacaaaatttccaagttagttctttaagtttcaaa 8408402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 359 - 397
Target Start/End: Complemental strand, 2508305 - 2508267
Alignment:
Q  359 ttaaaagactaacttggaaattttgtcaaactaaaagga 397  Q
    ||||| |||||||||||||||| ||||||||||||||||    
T  2508305 ttaaaggactaacttggaaattctgtcaaactaaaagga 2508267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 322 - 356
Target Start/End: Complemental strand, 19681338 - 19681304
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttgaa 356  Q
    |||||||||||||||||||||||||| ||||||||    
T  19681338 tgaaatagtttatcaactaaaatgacctatttgaa 19681304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 305 - 343
Target Start/End: Original strand, 35023938 - 35023976
Alignment:
Q  305 ttttgaaacagtgacgatgaaatagtttatcaactaaaa 343  Q
    |||||||| ||| ||||||||||||||||||||||||||    
T  35023938 ttttgaaatagttacgatgaaatagtttatcaactaaaa 35023976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 351 - 421
Target Start/End: Original strand, 43098365 - 43098435
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    ||||||| ||||| ||||||||||| |||| ||| ||||||||| ||| ||  ||||||||| ||||||||    
T  43098365 tttgaaacttaaaggactaacttgggaattctgttaaactaaaatgacatatttgaaacttttgaaactta 43098435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 401
Target Start/End: Complemental strand, 35023907 - 35023858
Alignment:
Q  352 ttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggaccta 401  Q
    ||||||||||||  ||||| |||||| || ||||||||||||||||||||    
T  35023907 ttgaaatttaaagcactaatttggaagttatgtcaaactaaaaggaccta 35023858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 336 - 412
Target Start/End: Complemental strand, 35023872 - 35023796
Alignment:
Q  336 aactaaaatgacttatttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaacttt 412  Q
    |||||||| ||| ||||| |||||||||||||||| ||   |||||| || |||||||| || |||| |||||||||    
T  35023872 aactaaaaggacctatttaaaatttaaaagactaatttaagaattttatcgaactaaaatgatctaattgaaacttt 35023796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 351 - 399
Target Start/End: Complemental strand, 41735863 - 41735815
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacc 399  Q
    ||||||| ||||| ||||||||||| |||| ||| ||||||||||||||    
T  41735863 tttgaaacttaaaggactaacttgggaattatgttaaactaaaaggacc 41735815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 351 - 399
Target Start/End: Original strand, 42116081 - 42116129
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacc 399  Q
    ||||||| ||||| |||||||||  ||||||||||||||||||| ||||    
T  42116081 tttgaaacttaaaggactaacttaaaaattttgtcaaactaaaatgacc 42116129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 236 - 284
Target Start/End: Complemental strand, 44916372 - 44916324
Alignment:
Q  236 agtctttttaatttgacagaatttgcaagttagttctttaagtttcaaa 284  Q
    |||| ||||| ||||||| ||||| ||||||||| ||||||||||||||    
T  44916372 agtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaa 44916324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 66; Significance: 5e-29; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 324 - 421
Target Start/End: Complemental strand, 10685986 - 10685889
Alignment:
Q  324 aaatagtttatcaactaaaatgacttatttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    |||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||| ||||||||||||| ||| ||| |||||| |||||||||||    
T  10685986 aaatagtttatcaactaaaatgacatatttgaaacttaaaggactaacttggaaattctgtcaaactaaaaagacgtaattgaaacgttcgaaactta 10685889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 229 - 343
Target Start/End: Complemental strand, 1765936 - 1765821
Alignment:
Q  229 tcaaataagtctttttaatttgacagaatttgcaagttagttctttaagtttcaaactaaaagaacctattt-aaacttttgaaacagtgacgatgaaat 327  Q
    ||||||||||| ||||| ||||||||||||| ||||||| | ||||||||||||||||||||| |  ||||| ||||||||||| | |||||| ||||||    
T  1765936 tcaaataagtcattttagtttgacagaatttccaagttactcctttaagtttcaaactaaaaggagatatttgaaacttttgaatcggtgacggtgaaat 1765837  T
Q  328 agtttatcaactaaaa 343  Q
    ||||||||||||||||    
T  1765836 agtttatcaactaaaa 1765821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 318 - 421
Target Start/End: Original strand, 4772617 - 4772720
Alignment:
Q  318 acgatgaaatagtttatcaactaaaatgacttatttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaa 417  Q
    ||||||||||||||||||||||||||  | |||||||||| ||||| |||||||||||||||| |||||||||||||||||| || | ||| |||| |||    
T  4772617 acgatgaaatagtttatcaactaaaagaatttatttgaaacttaaaggactaacttggaaattctgtcaaactaaaaggacccaattaaaaatttcaaaa 4772716  T
Q  418 ctta 421  Q
    ||||    
T  4772717 ctta 4772720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 324 - 402
Target Start/End: Complemental strand, 4772249 - 4772171
Alignment:
Q  324 aaatagtttatcaactaaaatgacttatttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaa 402  Q
    ||||||||||||||||||||  |||||||||||| ||||| ||||| ||||  ||||||||||||||||||||||||||    
T  4772249 aaatagtttatcaactaaaagaacttatttgaaacttaaaggactaccttgtgaattttgtcaaactaaaaggacctaa 4772171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 322 - 421
Target Start/End: Complemental strand, 27351200 - 27351092
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttga---------aatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaacttt 412  Q
    ||||||||||||||||||||||||||||||||||         || ||||| ||||||||||  |||| ||||||||||||||||| ||| |||||||||    
T  27351200 tgaaatagtttatcaactaaaatgacttatttgatacttttgaaacttaaaggactaacttgagaattatgtcaaactaaaaggacttaattgaaacttt 27351101  T
Q  413 cgaaactta 421  Q
    |||||||||    
T  27351100 cgaaactta 27351092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 322 - 420
Target Start/End: Original strand, 49650985 - 49651083
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactt 420  Q
    |||||||||||||||||||||  ||| ||||||||| ||||| ||||||||||  |||| ||||||||||||| || |||  | |||||||||||||||    
T  49650985 tgaaatagtttatcaactaaagggacctatttgaaacttaaaggactaacttgagaattctgtcaaactaaaatgatctatttaaaactttcgaaactt 49651083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 351 - 420
Target Start/End: Complemental strand, 8902872 - 8902803
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactt 420  Q
    ||||||| ||||| ||||||||||| |||||||||||||||||| ||| ||| |||||||||||||||||    
T  8902872 tttgaaacttaaaggactaacttgggaattttgtcaaactaaaatgacttaattgaaactttcgaaactt 8902803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 351 - 420
Target Start/End: Original strand, 29419062 - 29419131
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactt 420  Q
    ||||||| |||||||||||| || | |||| ||||||||||||||||||||| |||||||||||||||||    
T  29419062 tttgaaacttaaaagactaattttggaattctgtcaaactaaaaggacctaattgaaactttcgaaactt 29419131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 322 - 437
Target Start/End: Complemental strand, 49650714 - 49650593
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttgaaatttaaaag-actaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactt 420  Q
    |||||| |||||||||||||||  || ||||||||| ||||||| |||||||||  |||| ||||||||||||||||||||| ||||| |||| ||| ||    
T  49650714 tgaaatggtttatcaactaaaagaacctatttgaaacttaaaaggactaacttgagaattctgtcaaactaaaaggacctaattgaaattttcaaaattt 49650615  T
Q  421 -----actaacttgagaattat 437  Q
         |||||||||||||||||    
T  49650614 aaaggactaacttgagaattat 49650593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 359 - 421
Target Start/End: Complemental strand, 11897945 - 11897883
Alignment:
Q  359 ttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    ||||| || |||||||| |||| ||||||||||||||||||||| ||||||||||||||||||    
T  11897945 ttaaaggattaacttgggaattctgtcaaactaaaaggacctaattgaaactttcgaaactta 11897883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 322 - 421
Target Start/End: Original strand, 48352717 - 48352825
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttattt---------gaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaacttt 412  Q
    |||||||||||||||||||||||||| |||||         |||| ||||| ||||||||||| |||| ||||||||||||  ||||||| |||| ||||    
T  48352717 tgaaatagtttatcaactaaaatgacctatttaaaacttttgaaacttaaaggactaacttgggaattatgtcaaactaaatagacctaattgaatcttt 48352816  T
Q  413 cgaaactta 421  Q
    |||||||||    
T  48352817 cgaaactta 48352825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 237 - 284
Target Start/End: Original strand, 10685912 - 10685959
Alignment:
Q  237 gtctttttaatttgacagaatttgcaagttagttctttaagtttcaaa 284  Q
    ||||||||| ||||||||||||| ||||||||| ||||||||||||||    
T  10685912 gtctttttagtttgacagaatttccaagttagtcctttaagtttcaaa 10685959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 322 - 421
Target Start/End: Original strand, 10686689 - 10686797
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttgaaa--tttaaaa-------gactaacttggaaattttgtcaaactaaaaggacctaaatgaaacttt 412  Q
    |||||||||||||||||||||||||| |||||||||  |||||||       ||||||||||  |||| |||  || ||||||||||||| | |||||||    
T  10686689 tgaaatagtttatcaactaaaatgacctatttgaaacttttaaaacttaaatgactaacttgagaattctgttgaagtaaaaggacctaacttaaacttt 10686788  T
Q  413 cgaaactta 421  Q
    |||||||||    
T  10686789 cgaaactta 10686797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 322 - 421
Target Start/End: Original strand, 27351519 - 27351618
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    |||||||||||||||| |||||  || ||||||||| ||||| |||||| |||  |||| | ||||| ||||| ||| ||| | ||||||||||||||||    
T  27351519 tgaaatagtttatcaagtaaaagcacctatttgaaacttaaaggactaatttgagaattctatcaaaataaaacgacataattaaaactttcgaaactta 27351618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 355 - 421
Target Start/End: Original strand, 44964031 - 44964097
Alignment:
Q  355 aaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    ||||||||| ||||||||||  |||| ||||||||||||||||||||  |||||||||  |||||||    
T  44964031 aaatttaaaggactaacttgagaattctgtcaaactaaaaggacctatttgaaacttttaaaactta 44964097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 362 - 399
Target Start/End: Original strand, 29419133 - 29419170
Alignment:
Q  362 aaagactaacttggaaattttgtcaaactaaaaggacc 399  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  29419133 aaagactaacttggaaattatgtcaaactaaaaggacc 29419170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 322 - 394
Target Start/End: Original strand, 4030728 - 4030800
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttgaaatttaaaagactaacttggaaattttgtcaaactaaaa 394  Q
    |||||||||||| ||||||||||||| ||||||||| ||||  || || |||| ||||| ||| |||||||||    
T  4030728 tgaaatagtttaccaactaaaatgacctatttgaaacttaagggattagcttgaaaattctgtgaaactaaaa 4030800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 237 - 281
Target Start/End: Original strand, 27351055 - 27351099
Alignment:
Q  237 gtctttttaatttgacagaatttgcaagttagttctttaagtttc 281  Q
    ||||||||| |||||||||||| |||||||||| |||||||||||    
T  27351055 gtctttttactttgacagaattcgcaagttagtcctttaagtttc 27351099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 284
Target Start/End: Complemental strand, 4772693 - 4772650
Alignment:
Q  241 ttttaatttgacagaatttgcaagttagttctttaagtttcaaa 284  Q
    ||||| ||||||||||||| ||||||||| ||||||||||||||    
T  4772693 ttttagtttgacagaatttccaagttagtcctttaagtttcaaa 4772650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 359 - 435
Target Start/End: Original strand, 44964095 - 44964175
Alignment:
Q  359 ttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactt----actaacttgagaatt 435  Q
    ||||| || |||||||  |||| ||||||||||||| || |||| |||||||||||||||||    |||||||||||||||    
T  44964095 ttaaaggaataacttgagaattctgtcaaactaaaatgatctaattgaaactttcgaaacttaaagactaacttgagaatt 44964175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 351 - 421
Target Start/End: Original strand, 1765881 - 1765951
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    ||||||| ||||| || ||||||||||||| ||||||||||||| ||| ||  ||||||||| ||| ||||    
T  1765881 tttgaaacttaaaggagtaacttggaaattctgtcaaactaaaatgacttatttgaaacttttgaagctta 1765951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 351 - 421
Target Start/End: Original strand, 17898801 - 17898871
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    ||||||||||||| |||||| |||  |||| ||||||||||||| ||| ||  ||||||||| ||||||||    
T  17898801 tttgaaatttaaaggactaatttgataattctgtcaaactaaaatgacttatttgaaacttttgaaactta 17898871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 351 - 421
Target Start/End: Complemental strand, 44963950 - 44963880
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    ||||||| ||||| |||||| |||| |||  | ||||||||||||||| | | ||||||||||||||||||    
T  44963950 tttgaaacttaaaggactaatttgggaatcctatcaaactaaaaggactttattgaaactttcgaaactta 44963880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 377 - 421
Target Start/End: Complemental strand, 4030389 - 4030344
Alignment:
Q  377 aattttgtcaaactaaaa-ggacctaaatgaaactttcgaaactta 421  Q
    |||| ||||||||||||| |||||||| ||||||||||||||||||    
T  4030389 aattctgtcaaactaaaaaggacctaattgaaactttcgaaactta 4030344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 10685896 - 10685851
Alignment:
Q  354 gaaatttaaaagactaacttggaaattttgtcaaactaaaaggacc 399  Q
    |||| ||||| |||||||||| ||||| ||||||||||||||||||    
T  10685896 gaaacttaaaggactaacttgaaaattctgtcaaactaaaaggacc 10685851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 10686790 - 10686835
Alignment:
Q  354 gaaatttaaaagactaacttggaaattttgtcaaactaaaaggacc 399  Q
    |||| ||||| |||||||||| ||||| ||||||||||||||||||    
T  10686790 gaaacttaaaggactaacttgaaaattctgtcaaactaaaaggacc 10686835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 48352818 - 48352863
Alignment:
Q  354 gaaatttaaaagactaacttggaaattttgtcaaactaaaaggacc 399  Q
    |||| |||||||||||||| || |||| ||||||||||||||||||    
T  48352818 gaaacttaaaagactaactcgggaattctgtcaaactaaaaggacc 48352863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 241 - 281
Target Start/End: Original strand, 10685856 - 10685896
Alignment:
Q  241 ttttaatttgacagaatttgcaagttagttctttaagtttc 281  Q
    ||||| ||||||||||||| ||||||||| |||||||||||    
T  10685856 ttttagtttgacagaattttcaagttagtcctttaagtttc 10685896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 241 - 281
Target Start/End: Complemental strand, 10686830 - 10686790
Alignment:
Q  241 ttttaatttgacagaatttgcaagttagttctttaagtttc 281  Q
    ||||| ||||||||||||| ||||||||| |||||||||||    
T  10686830 ttttagtttgacagaattttcaagttagtcctttaagtttc 10686790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 339 - 395
Target Start/End: Complemental strand, 28055819 - 28055763
Alignment:
Q  339 taaaatgacttatttgaaatttaaaagactaacttggaaattttgtcaaactaaaag 395  Q
    ||||||||||||||| ||| ||||| ||||||| ||| | |||||||||||| ||||    
T  28055819 taaaatgacttatttaaaacttaaaggactaacctggtatttttgtcaaacttaaag 28055763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 399
Target Start/End: Original strand, 39302765 - 39302809
Alignment:
Q  355 aaatttaaaagactaacttggaaattttgtcaaactaaaaggacc 399  Q
    ||||||||| ||||||||||  |||| ||||||||||||||||||    
T  39302765 aaatttaaaggactaacttgagaattctgtcaaactaaaaggacc 39302809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 5e-23; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 322 - 397
Target Start/End: Original strand, 26275983 - 26276058
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttgaaatttaaaagactaacttggaaattttgtcaaactaaaagga 397  Q
    |||||||| ||||||||||||| ||| ||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  26275983 tgaaatagcttatcaactaaaaggacatatttgaaacttaaaggactaacttggaaattttgtcaaactaaaagga 26276058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 322 - 435
Target Start/End: Complemental strand, 35190053 - 35189936
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactt- 420  Q
    |||||||||||||||||||||||||  | ||||||| ||||| ||||||||||| | || ||||||||||||| ||||||  | |||||||||||||||     
T  35190053 tgaaatagtttatcaactaaaatgatctttttgaaacttaaaggactaacttgggagttctgtcaaactaaaatgacctatttaaaactttcgaaactta 35189954  T
Q  421 ---actaacttgagaatt 435  Q
       |||||||||||||||    
T  35189953 aagactaacttgagaatt 35189936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 322 - 421
Target Start/End: Original strand, 35190397 - 35190495
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    |||||||||||||||||||||| |||  ||| |||| ||||||||| || |||  |||||||||||||||||||||||||| |||||||||| |||||||    
T  35190397 tgaaatagtttatcaactaaaaagaccaatt-gaaacttaaaagacaaatttgagaattttgtcaaactaaaaggacctaattgaaactttcaaaactta 35190495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 322 - 417
Target Start/End: Complemental strand, 36418026 - 36417931
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaa 417  Q
    ||||||| |||||||||||||| ||| ||||||||| ||||| ||||||||||  |||| |||||||| ||||| |||||| ||||||||||||||    
T  36418026 tgaaataatttatcaactaaaaggacctatttgaaacttaaaggactaacttgagaattatgtcaaaccaaaagaacctaattgaaactttcgaaa 36417931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 322 - 397
Target Start/End: Complemental strand, 38082696 - 38082621
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttgaaatttaaaagactaacttggaaattttgtcaaactaaaagga 397  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||||||  |||| ||| ||||||||||||    
T  38082696 tgaaatagtttatcaactaaaatgacctatttaaaatttaaaagactaacttgagaattctgtgaaactaaaagga 38082621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 322 - 418
Target Start/End: Complemental strand, 13538613 - 13538513
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttgaaatttaaaag----actaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaa 417  Q
    |||||||||||||||||||||||||| ||||||||| |||||||    | ||||||| ||||| | ||||||||||  ||||||| ||||||||||||||    
T  13538613 tgaaatagtttatcaactaaaatgacatatttgaaacttaaaaggactaataacttgaaaattctatcaaactaaacagacctaattgaaactttcgaaa 13538514  T
Q  418 c 418  Q
    |    
T  13538513 c 13538513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 275 - 421
Target Start/End: Original strand, 6336254 - 6336410
Alignment:
Q  275 aagtttcaaactaaaagaacctattt-aaacttttgaaacagtgacgatgaaatagtttatcaactaaaatgactt---------atttgaaatttaaaa 364  Q
    |||||||||||  |||| |||||||| |||||||| |||| |||||| |||||||||||||||||| ||| ||| |         ||||||||||||||     
T  6336254 aagtttcaaacataaaggacctatttgaaacttttaaaacggtgacggtgaaatagtttatcaactgaaaggacatatttgaaacatttgaaatttaaag 6336353  T
Q  365 gactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    ||||||||| | |||| || |||| |||||| | |||| ||||||||||||||||||    
T  6336354 gactaacttaggaattctgacaaattaaaagaatctaattgaaactttcgaaactta 6336410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 351 - 418
Target Start/End: Original strand, 36418413 - 36418480
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaac 418  Q
    ||||||| ||||| |||||||||| ||||| ||||||||||||||||||||| ||||||||| |||||    
T  36418413 tttgaaacttaaaggactaacttgaaaattatgtcaaactaaaaggacctaattgaaacttttgaaac 36418480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 321 - 421
Target Start/End: Complemental strand, 26275645 - 26275545
Alignment:
Q  321 atgaaatagtttatcaactaaaatgacttatttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactt 420  Q
    |||||||||||| ||||||||||  || ||||||||| || || ||||||||||| ||||  |||||||||||| || |||  ||||||||| |||||||    
T  26275645 atgaaatagtttgtcaactaaaagaacctatttgaaacttgaatgactaacttgggaattccgtcaaactaaaatgatctatttgaaacttttgaaactt 26275546  T
Q  421 a 421  Q
    |    
T  26275545 a 26275545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 351 - 421
Target Start/End: Complemental strand, 32660310 - 32660240
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    ||||||| ||||| ||||||||||  |||||||| |||||||||| || ||| ||||||||||||||||||    
T  32660310 tttgaaacttaaaggactaacttgagaattttgtaaaactaaaagaacataattgaaactttcgaaactta 32660240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 322 - 421
Target Start/End: Original strand, 38405522 - 38405618
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    |||||||||||||||||||||| ||| ||||| ||| ||||| ||||   |||  |||| || |||||||||| ||| ||| ||||||||||||||||||    
T  38405522 tgaaatagtttatcaactaaaaggacatatttaaaacttaaaggact---ttgagaattctgccaaactaaaatgacataattgaaactttcgaaactta 38405618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 328 - 396
Target Start/End: Complemental strand, 38405179 - 38405112
Alignment:
Q  328 agtttatcaactaaaatgacttatttgaaatttaaaagactaacttggaaattttgtcaaactaaaagg 396  Q
    |||||||||||||||||||| ||||||||| |||||| | |||||||| |||| ||||||||| |||||    
T  38405179 agtttatcaactaaaatgacatatttgaaacttaaaa-attaacttggtaattatgtcaaacttaaagg 38405112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 322 - 421
Target Start/End: Complemental strand, 20728677 - 20728569
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttgaaa--tttaaaa-------gactaacttggaaattttgtcaaactaaaaggacctaaatgaaacttt 412  Q
    ||||||||||| |||||||||| ||| |||||||||  |||||||       ||||||||||  |||| ||| ||||||||||||||||| |||| ||||    
T  20728677 tgaaatagtttttcaactaaaaagacatatttgaaacttttaaaacttaaaggactaacttgagaattctgttaaactaaaaggacctaattgaatcttt 20728578  T
Q  413 cgaaactta 421  Q
    |||||||||    
T  20728577 cgaaactta 20728569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 421
Target Start/End: Complemental strand, 6336254 - 6336184
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    ||||||| ||||| |||||||||||||||| | ||||||||||| ||||||  | ||||||| ||||||||    
T  6336254 tttgaaacttaaaggactaacttggaaattctttcaaactaaaatgacctatttaaaacttttgaaactta 6336184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 417
Target Start/End: Complemental strand, 30737851 - 30737785
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaa 417  Q
    ||||||| |||||||||||| |||  |||| ||||||||||||| ||| ||| ||||||||||||||    
T  30737851 tttgaaacttaaaagactaatttgagaattatgtcaaactaaaaagacgtaattgaaactttcgaaa 30737785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 349 - 399
Target Start/End: Original strand, 31813953 - 31814003
Alignment:
Q  349 tatttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacc 399  Q
    ||||||||| ||||| ||||||||||| |||| ||||||||||||||||||    
T  31813953 tatttgaaacttaaatgactaacttgggaattctgtcaaactaaaaggacc 31814003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 322 - 399
Target Start/End: Complemental strand, 32459516 - 32459430
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttattt---------gaaatttaaaagactaacttggaaattttgtcaaactaaaaggacc 399  Q
    |||||||||||||||||||||||||| |||||         |||| ||||| ||||||||||  |||||||||||||||||||||||    
T  32459516 tgaaatagtttatcaactaaaatgacctatttaaaacttttgaaacttaaatgactaacttgtgaattttgtcaaactaaaaggacc 32459430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 421
Target Start/End: Complemental strand, 32660370 - 32660300
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    ||||||| ||||| ||||||||| | |||| ||||||||||||| ||||||  ||||||||| ||||||||    
T  32660370 tttgaaacttaaaggactaacttaggaattctgtcaaactaaaatgacctatttgaaacttttgaaactta 32660300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 368 - 421
Target Start/End: Complemental strand, 13543178 - 13543125
Alignment:
Q  368 taacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    |||||||||||||   ||||||||||| ||||||| ||||||||||||||||||    
T  13543178 taacttggaaattccatcaaactaaaaagacctaattgaaactttcgaaactta 13543125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 322 - 359
Target Start/End: Complemental strand, 19278853 - 19278816
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttgaaatt 359  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  19278853 tgaaatagtttatcaactaaaatgatttatttgaaatt 19278816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 275 - 343
Target Start/End: Original strand, 32660370 - 32660439
Alignment:
Q  275 aagtttcaaactaaaagaacctattt-aaacttttgaaacagtgacgatgaaatagtttatcaactaaaa 343  Q
    ||||||||||||||| | || ||||| |||||||| |||| |||||  ||||||||||||||||||||||    
T  32660370 aagtttcaaactaaatggacttatttgaaacttttaaaacggtgacactgaaatagtttatcaactaaaa 32660439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 351 - 399
Target Start/End: Complemental strand, 6336194 - 6336146
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacc 399  Q
    ||||||| ||||| |||||||||||||||| || |||||||||||||||    
T  6336194 tttgaaacttaaaggactaacttggaaattctgccaaactaaaaggacc 6336146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 351 - 399
Target Start/End: Complemental strand, 18951354 - 18951306
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacc 399  Q
    ||||||| ||||| ||||||||||| |||| ||||||||||||||||||    
T  18951354 tttgaaacttaaaggactaacttgggaattctgtcaaactaaaaggacc 18951306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 237 - 281
Target Start/End: Original strand, 20728532 - 20728576
Alignment:
Q  237 gtctttttaatttgacagaatttgcaagttagttctttaagtttc 281  Q
    ||||||||| ||||||||||||| ||||||||| |||||||||||    
T  20728532 gtctttttagtttgacagaatttccaagttagtcctttaagtttc 20728576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 322 - 397
Target Start/End: Original strand, 20729019 - 20729103
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttgaaa---------tttaaaagactaacttggaaattttgtcaaactaaaagga 397  Q
    |||||||||||||||||||||| ||| |||||||||         |||||| |||||||||| ||||| ||||||||||||||||    
T  20729019 tgaaatagtttatcaactaaaaggacctatttgaaacttttaaaatttaaaggactaacttgaaaattctgtcaaactaaaagga 20729103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 322 - 357
Target Start/End: Complemental strand, 5734611 - 5734576
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttgaaa 357  Q
    ||||||||||||| ||||||||||||||||||||||    
T  5734611 tgaaatagtttattaactaaaatgacttatttgaaa 5734576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 322 - 357
Target Start/End: Original strand, 5734956 - 5734991
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttgaaa 357  Q
    |||||||||||||||||||||||||| |||||||||    
T  5734956 tgaaatagtttatcaactaaaatgacctatttgaaa 5734991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 390
Target Start/End: Original strand, 18238351 - 18238390
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaact 390  Q
    ||||||| ||||| ||||||||||||||||||||||||||    
T  18238351 tttgaaacttaaacgactaacttggaaattttgtcaaact 18238390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 336 - 399
Target Start/End: Original strand, 20729093 - 20729156
Alignment:
Q  336 aactaaaatgacttatttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacc 399  Q
    |||||||| ||  ||||| ||||||||| ||||||||||  |||||| ||||||||||||||||    
T  20729093 aactaaaaggatctatttaaaatttaaaggactaacttgataattttatcaaactaaaaggacc 20729156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 284
Target Start/End: Original strand, 26275512 - 26275555
Alignment:
Q  241 ttttaatttgacagaatttgcaagttagttctttaagtttcaaa 284  Q
    ||||| |||||||||||||  |||||||||||||||||||||||    
T  26275512 ttttagtttgacagaatttctaagttagttctttaagtttcaaa 26275555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 280
Target Start/End: Complemental strand, 35190528 - 35190489
Alignment:
Q  241 ttttaatttgacagaatttgcaagttagttctttaagttt 280  Q
    ||||||||||||||||||| ||||||| ||||||||||||    
T  35190528 ttttaatttgacagaattttcaagttacttctttaagttt 35190489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 351 - 397
Target Start/End: Original strand, 35891274 - 35891320
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaagga 397  Q
    ||||||| ||||| |||||||||| ||||| ||||||||||||||||    
T  35891274 tttgaaacttaaaggactaacttgaaaattatgtcaaactaaaagga 35891320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 20728576 - 20728531
Alignment:
Q  354 gaaatttaaaagactaacttggaaattttgtcaaactaaaaggacc 399  Q
    |||| ||||| |||||||||||||||| ||||||||||||| ||||    
T  20728576 gaaacttaaaggactaacttggaaattctgtcaaactaaaaagacc 20728531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 351 - 399
Target Start/End: Complemental strand, 1722551 - 1722503
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacc 399  Q
    ||||||| ||||| ||||||||||  |||||||| ||||||||||||||    
T  1722551 tttgaaaattaaaggactaacttgtgaattttgttaaactaaaaggacc 1722503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 5e-23; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 322 - 417
Target Start/End: Original strand, 3088077 - 3088172
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaa 417  Q
    |||||||||||||||| ||||| ||| ||||||||| ||||| |||||||| ||||||  ||||||||||||||||| ||| ||||||||||||||    
T  3088077 tgaaatagtttatcaattaaaaggacctatttgaaacttaaaggactaactaggaaatcatgtcaaactaaaaggacataattgaaactttcgaaa 3088172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 227 - 328
Target Start/End: Original strand, 14964727 - 14964829
Alignment:
Q  227 tctcaaataagtctttttaatttgacagaatttgcaagttagttctttaagtttcaaactaaaagaaccta-tttaaacttttgaaacagtgacgatgaa 325  Q
    ||||||||||||| ||||| ||||||||||||| |||||||||  |||||||||||||||||||| ||| | || ||||||||||||| |||||| ||||    
T  14964727 tctcaaataagtccttttagtttgacagaattttcaagttagtcttttaagtttcaaactaaaaggaccaagttgaaacttttgaaacggtgacggtgaa 14964826  T
Q  326 ata 328  Q
    |||    
T  14964827 ata 14964829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 322 - 411
Target Start/End: Original strand, 4276600 - 4276689
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactt 411  Q
    |||||||||||||||||||||||||  ||||||||| ||||| ||||||||||| |||| ||||||||||||| || |||| ||||||||    
T  4276600 tgaaatagtttatcaactaaaatgatctatttgaaacttaaaggactaacttgggaattctgtcaaactaaaatgatctaattgaaactt 4276689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 251 - 384
Target Start/End: Complemental strand, 5505725 - 5505591
Alignment:
Q  251 acagaatttgcaagttagttctttaagtttcaaactaaaagaacctattt-aaacttttgaaacagtgacgatgaaatagtttatcaactaaaatgactt 349  Q
    |||||||||  |||||||| |||||||||||||||||||||||| ||||| |||||||| ||||  ||| | ||||| | |||||||||||||||||| |    
T  5505725 acagaatttctaagttagtcctttaagtttcaaactaaaagaacttatttgaaactttttaaacgatgatggtgaaaaaatttatcaactaaaatgacct 5505626  T
Q  350 atttgaaatttaaaagactaacttggaaattttgt 384  Q
     ||| |||  |||| || ||||||| |||||||||    
T  5505625 ttttaaaacctaaatgagtaacttgaaaattttgt 5505591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 229 - 357
Target Start/End: Complemental strand, 54456863 - 54456725
Alignment:
Q  229 tcaaataagtctttttaatttgacagaatttgcaagttagttctttaagtttcaaa---------ctaaaagaacctattt-aaacttttgaaacagtga 318  Q
    ||||||| ||| ||||||||||||| ||||| ||||||||| ||||||||||||||         ||||||  || ||||| ||||||||||||| ||||    
T  54456863 tcaaataggtccttttaatttgacataatttccaagttagtcctttaagtttcaaaagtttcaaactaaaaagacttatttgaaacttttgaaacggtga 54456764  T
Q  319 cgatgaaatagtttatcaactaaaatgacttatttgaaa 357  Q
    || |||| ||||||||||||||||||||| |||||||||    
T  54456763 cggtgaattagtttatcaactaaaatgacatatttgaaa 54456725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 322 - 399
Target Start/End: Original strand, 35555958 - 35556035
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacc 399  Q
    ||||||||||||| |||||||||||| ||||||||| ||||| || |||||||| ||||||| |||||||||||||||    
T  35555958 tgaaatagtttattaactaaaatgacctatttgaaacttaaaggattaacttgggaattttgccaaactaaaaggacc 35556035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 351 - 421
Target Start/End: Original strand, 31247657 - 31247727
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    ||||||| |||||  |||||||||| |||| |||| |||||||||||||||| ||||||||||||||||||    
T  31247657 tttgaaacttaaagcactaacttgggaattctgtccaactaaaaggacctaattgaaactttcgaaactta 31247727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 322 - 399
Target Start/End: Complemental strand, 14629365 - 14629288
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacc 399  Q
    ||||||| ||||||||||||||  || ||||||||| ||||| ||||||||||| |||| ||||||| ||||||||||    
T  14629365 tgaaataatttatcaactaaaagaacctatttgaaacttaaaggactaacttgggaattctgtcaaagtaaaaggacc 14629288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 351 - 421
Target Start/End: Original strand, 54456808 - 54456878
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    ||||||| ||||| |||||||||||||||| ||||||| ||||||||||||  ||||||||| || |||||    
T  54456808 tttgaaacttaaaggactaacttggaaattatgtcaaattaaaaggacctatttgaaacttttgatactta 54456878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 351 - 398
Target Start/End: Complemental strand, 14964784 - 14964737
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggac 398  Q
    ||||||| |||||||||||||||| ||||| |||||||||||||||||    
T  14964784 tttgaaacttaaaagactaacttgaaaattctgtcaaactaaaaggac 14964737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 351 - 419
Target Start/End: Original strand, 5505753 - 5505822
Alignment:
Q  351 tttgaaatttaaaag-actaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaact 419  Q
    ||||||| ||||||| ||||| || |||||| |||||||| ||||||| |||| ||||||||||||||||    
T  5505753 tttgaaacttaaaaggactaattttgaaattatgtcaaacaaaaaggatctaattgaaactttcgaaact 5505822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 241 - 281
Target Start/End: Complemental strand, 31247760 - 31247720
Alignment:
Q  241 ttttaatttgacagaatttgcaagttagttctttaagtttc 281  Q
    ||||||||||||||||||| ||||||||| |||||||||||    
T  31247760 ttttaatttgacagaatttccaagttagtcctttaagtttc 31247720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 322 - 421
Target Start/End: Complemental strand, 35555676 - 35555568
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttg---------aaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaacttt 412  Q
    ||||||||||||||||||||||||| |||||||         ||||||||  ||||||||||  |||| ||||||||||||| ||  ||| |||||||||    
T  35555676 tgaaatagtttatcaactaaaatgatttatttgaaactttcaaaatttaatggactaacttgataattctgtcaaactaaaatgatttaattgaaacttt 35555577  T
Q  413 cgaaactta 421  Q
     ||||||||    
T  35555576 tgaaactta 35555568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 284
Target Start/End: Original strand, 4276191 - 4276246
Alignment:
Q  229 tcaaataagtctttttaatttgacagaatttgcaagttagttctttaagtttcaaa 284  Q
    |||| |||||||||||| ||||||| |||||  | |||||||||||||||||||||    
T  4276191 tcaattaagtctttttagtttgacataatttttatgttagttctttaagtttcaaa 4276246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 322 - 421
Target Start/End: Complemental strand, 50530385 - 50530287
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    |||||||||||||||| ||||||||| ||||| ||| || || ||| || |||  |||| ||||||||||||| ||||||| | | ||||| ||||||||    
T  50530385 tgaaatagtttatcaattaaaatgacctatttaaaactt-aaggacaaatttgagaattctgtcaaactaaaatgacctaattaatacttttgaaactta 50530287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 322 - 360
Target Start/End: Complemental strand, 35545253 - 35545215
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttgaaattt 360  Q
    |||||||||||||||||||||| ||||||||| ||||||    
T  35545253 tgaaatagtttatcaactaaaaagacttatttaaaattt 35545215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 351 - 397
Target Start/End: Complemental strand, 50530297 - 50530251
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaagga 397  Q
    ||||||| |||||||||||| ||| ||||| ||||||||||||||||    
T  50530297 tttgaaacttaaaagactaagttgaaaattctgtcaaactaaaagga 50530251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 21377075 - 21377120
Alignment:
Q  354 gaaatttaaaagactaacttggaaattttgtcaaactaaaaggacc 399  Q
    ||||||||||  | ||||||||||||| ||||||||||||||||||    
T  21377075 gaaatttaaagtattaacttggaaattctgtcaaactaaaaggacc 21377120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 31247720 - 31247765
Alignment:
Q  354 gaaatttaaaagactaacttggaaattttgtcaaactaaaaggacc 399  Q
    |||| ||||| |||||||||||||||| ||||||| ||||||||||    
T  31247720 gaaacttaaaggactaacttggaaattctgtcaaattaaaaggacc 31247765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 236 - 284
Target Start/End: Original strand, 3087085 - 3087132
Alignment:
Q  236 agtctttttaatttgacagaatttgcaagttagttctttaagtttcaaa 284  Q
    |||| ||||||||||| ||||||| |||||||| |||||||||||||||    
T  3087085 agtccttttaatttgatagaattttcaagttag-tctttaagtttcaaa 3087132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 241 - 284
Target Start/End: Original strand, 19153885 - 19153929
Alignment:
Q  241 ttttaatttgacagaatttg-caagttagttctttaagtttcaaa 284  Q
    ||||| |||||||||||||| |||||||||| |||||||||||||    
T  19153885 ttttagtttgacagaatttgtcaagttagttatttaagtttcaaa 19153929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 377 - 417
Target Start/End: Original strand, 21377038 - 21377078
Alignment:
Q  377 aattttgtcaaactaaaaggacctaaatgaaactttcgaaa 417  Q
    |||| ||||||||||||| ||||||| ||||||||||||||    
T  21377038 aattatgtcaaactaaaatgacctaattgaaactttcgaaa 21377078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 52; Significance: 1e-20; HSPs: 3)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 322 - 421
Target Start/End: Complemental strand, 9534 - 9435
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    |||||||||||||||||||||| ||| ||||||||| |||||  |||||||||  |||| | | ||||||||||||||||| |||||||| |||||||||    
T  9534 tgaaatagtttatcaactaaaaggacctatttgaaacttaaagaactaacttgagaattctattaaactaaaaggacctaattgaaacttccgaaactta 9435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 365 - 421
Target Start/End: Original strand, 9900 - 9956
Alignment:
Q  365 gactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    ||||||||||| |||| |||||||||||||||| |||| ||||||||||||||||||    
T  9900 gactaacttgggaattatgtcaaactaaaaggaactaattgaaactttcgaaactta 9956  T

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Target: scaffold0027; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 241 - 281
Target Start/End: Complemental strand, 9989 - 9949
Alignment:
Q  241 ttttaatttgacagaatttgcaagttagttctttaagtttc 281  Q
    ||||| ||||||||||||  |||||||||||||||||||||    
T  9989 ttttagtttgacagaattctcaagttagttctttaagtttc 9949  T

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Target: scaffold0019 (Bit Score: 52; Significance: 1e-20; HSPs: 5)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 354 - 421
Target Start/End: Original strand, 124373 - 124440
Alignment:
Q  354 gaaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    |||| ||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  124373 gaaacttaaaggactaacttggaaattctgtcaaactaaaaggacctaattgaaactttcgaaactta 124440  T

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Target: scaffold0019; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 275 - 343
Target Start/End: Original strand, 124253 - 124322
Alignment:
Q  275 aagtttcaaactaaaagaacctattt-aaacttttgaaacagtgacgatgaaatagtttatcaactaaaa 343  Q
    ||||||||||||||||  |||||||| ||| ||||||||| |||| | ||||||||||||||||||||||    
T  124253 aagtttcaaactaaaatgacctatttgaaatttttgaaacggtgatggtgaaatagtttatcaactaaaa 124322  T

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Target: scaffold0019; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 351 - 399
Target Start/End: Complemental strand, 124194 - 124146
Alignment:
Q  351 tttgaaatttaaaagactaacttggaaattttgtcaaactaaaaggacc 399  Q
    ||||||| ||||| ||||||||||| |||||||||||||||||||||||    
T  124194 tttgaaacttaaaggactaacttgggaattttgtcaaactaaaaggacc 124146  T

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Target: scaffold0019; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 369 - 421
Target Start/End: Original strand, 124328 - 124380
Alignment:
Q  369 aacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactta 421  Q
    ||||||| |||| ||||||||||||| ||||||| ||||||||||||||||||    
T  124328 aacttgggaattctgtcaaactaaaaagacctaattgaaactttcgaaactta 124380  T

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Target: scaffold0019; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 241 - 281
Target Start/End: Complemental strand, 124413 - 124373
Alignment:
Q  241 ttttaatttgacagaatttgcaagttagttctttaagtttc 281  Q
    ||||| ||||||||||||| ||||||||| |||||||||||    
T  124413 ttttagtttgacagaatttccaagttagtcctttaagtttc 124373  T

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Target: scaffold0746 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0746
Description:

Target: scaffold0746; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 322 - 421
Target Start/End: Original strand, 510 - 618
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttg---------aaatttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaacttt 412  Q
    |||||||||||||||||||||||||| ||||||         ||||||||| ||||||||||  |||| ||||||| ||||||||||||| |||||||||    
T  510 tgaaatagtttatcaactaaaatgacctatttgaaacttttgaaatttaaaggactaacttgagaattctgtcaaattaaaaggacctaattgaaacttt 609  T
Q  413 cgaaactta 421  Q
    | |||||||    
T  610 caaaactta 618  T

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Target: scaffold0746; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 322 - 357
Target Start/End: Complemental strand, 169 - 134
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttgaaa 357  Q
    |||||||||||||||||||||||||| |||||||||    
T  169 tgaaatagtttatcaactaaaatgacatatttgaaa 134  T

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Target: scaffold0070 (Bit Score: 45; Significance: 2e-16; HSPs: 4)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 322 - 421
Target Start/End: Complemental strand, 28693 - 28585
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttgaaa---------tttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaacttt 412  Q
    |||||||||||||||||||||||||| |||||||||         |||||| ||||||||||  |||| ||||||| ||||||||||||| |||||||||    
T  28693 tgaaatagtttatcaactaaaatgacctatttgaaacttttgaattttaaaggactaacttgagaattctgtcaaattaaaaggacctaattgaaacttt 28594  T
Q  413 cgaaactta 421  Q
    | |||||||    
T  28593 caaaactta 28585  T

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Target: scaffold0070; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 322 - 397
Target Start/End: Original strand, 29034 - 29108
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttgaaatttaaaagactaacttggaaattttgtcaaactaaaagga 397  Q
    ||||||| |||||||||||||||||| ||||||||| || |||||||||||| | ||||  |||||||||||||||    
T  29034 tgaaataatttatcaactaaaatgacatatttgaaactt-aaagactaacttaggaattcggtcaaactaaaagga 29108  T

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Target: scaffold0070; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 280
Target Start/End: Original strand, 28552 - 28591
Alignment:
Q  241 ttttaatttgacagaatttgcaagttagttctttaagttt 280  Q
    ||||||||||||||||||| ||||||||| ||||||||||    
T  28552 ttttaatttgacagaatttccaagttagtcctttaagttt 28591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 359 - 399
Target Start/End: Complemental strand, 28587 - 28547
Alignment:
Q  359 ttaaaagactaacttggaaattttgtcaaactaaaaggacc 399  Q
    ||||| |||||||||||||||| ||||||| ||||||||||    
T  28587 ttaaaggactaacttggaaattctgtcaaattaaaaggacc 28547  T

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Target: scaffold0041 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 359 - 437
Target Start/End: Original strand, 45224 - 45307
Alignment:
Q  359 ttaaaagactaacttggaaattttgtcaaactaaaaggacctaaatgaaactttcgaaactt-----actaacttgagaattat 437  Q
    ||||| |||||| ||| ||||| ||||||||||||||||||||| |||||||||  ||||||     |||||||||||||||||    
T  45224 ttaaatgactaatttgaaaattatgtcaaactaaaaggacctaattgaaacttttaaaacttaaaagactaacttgagaattat 45307  T

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Target: scaffold0374 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0374
Description:

Target: scaffold0374; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 322 - 353
Target Start/End: Original strand, 16582 - 16613
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttattt 353  Q
    ||||||||||||||||||||||||||||||||    
T  16582 tgaaatagtttatcaactaaaatgacttattt 16613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 322 - 399
Target Start/End: Complemental strand, 16262 - 16176
Alignment:
Q  322 tgaaatagtttatcaactaaaatgacttatttgaaattt---------aaaagactaacttggaaattttgtcaaactaaaaggacc 399  Q
    |||||||||||||||||||||||||| ||||| ||| ||         ||| |||||| ||||||||||| ||||||||||||||||    
T  16262 tgaaatagtttatcaactaaaatgacctatttaaaactttttaaacttaaaggactaatttggaaattttatcaaactaaaaggacc 16176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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