View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14649_high_48 (Length: 247)
Name: NF14649_high_48
Description: NF14649
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14649_high_48 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 9 - 247
Target Start/End: Original strand, 33440853 - 33441092
Alignment:
| Q |
9 |
gaaaaatatgacaacacatagatttttctcaatcaccccacgattccagtaaagccacactcttcaaaagttaatattcgtcctacttaatataagagta |
108 |
Q |
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| T |
33440853 |
gaaagatattacaacacatagatttttctcagtcaccccacgattccagtaaagccacactcttcaaaagttaatattcgtcctacttaatataagagta |
33440952 |
T |
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| Q |
109 |
catataaaagaaagaaaaaatttagacacaaacctatattggctc-aattgatggatcttgtgacgaagaacttgagtcaatatatatagtcttgatctt |
207 |
Q |
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| T |
33440953 |
catataaaagaaagaaaaaatttagacacaaacctatattgactctaattgatggatcttgtgacgaagaacttgagtcaatatatatagtcttgatctt |
33441052 |
T |
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| Q |
208 |
catcttcttttaccatcataagcaatgtgagacttgttat |
247 |
Q |
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||||||| |||||||||||||||||||||||||||||||| |
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| T |
33441053 |
catcttcctttaccatcataagcaatgtgagacttgttat |
33441092 |
T |
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