View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14649_high_49 (Length: 243)
Name: NF14649_high_49
Description: NF14649
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14649_high_49 |
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Alignment Details
Target: chr4 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 23 - 226
Target Start/End: Original strand, 23310605 - 23310808
Alignment:
| Q |
23 |
ttatatgcaggaaaatattgaaatgttatgtcaagcaacacactttattcataacaatgagaacatattaaaaaccttgtgtatcatagtgagtgaaggt |
122 |
Q |
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| T |
23310605 |
ttatatgcaggaaaatattgaaatgttatgtcaagcaacacactttattcataacaatgagaacatagtaaaaaccttgtgtatcatagtgagtgaaggt |
23310704 |
T |
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| Q |
123 |
agctataatttttggacattttattcagatataagtaaaattacttttcaaccaaaaagagattgagttttgtagtgatacccaagatagccaatcatta |
222 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23310705 |
agctataatttttggacattttattcagatataagtaaaattacttttcaaccaaaaagagattgagttttgtagtgatacccaagatagccaatcatta |
23310804 |
T |
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| Q |
223 |
ggag |
226 |
Q |
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|||| |
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| T |
23310805 |
ggag |
23310808 |
T |
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