View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14649_low_17 (Length: 436)
Name: NF14649_low_17
Description: NF14649
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14649_low_17 |
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Alignment Details
Target: chr7 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 21 - 429
Target Start/End: Complemental strand, 10382636 - 10382230
Alignment:
| Q |
21 |
atcagtggcagtgctgtgtgtattcaagcaaccatannnnnnnatcatttcaaacttttaagtatgatatgaataccannnnnnnnn-agatgttgaatg |
119 |
Q |
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|||||||| |||||| |||| |||||||||| |||| ||||||| ||||||||||||||||||||||||||| |||||||||| |
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| T |
10382636 |
atcagtgggagtgctttgtgaattcaagcaagcatatttttttatcatttgaaacttttaagtatgatatgaataccatattttttttagatgttgaa-- |
10382539 |
T |
|
| Q |
120 |
atacgatatatgagacccatttttaaaatggaccgactatcaaaatggtgggacgcaacatacactctatcnnnnnnnnnnnnnnnnagaggacatgcac |
219 |
Q |
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||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
10382538 |
atacgatatatgagacctatttttaaaatggaccgactatcaaaatggtgggacgcaacatacactctatcttttttttt-------agaggacatgcac |
10382446 |
T |
|
| Q |
220 |
tctatttaatgagtgttcgaaagagtgttatatttagtccgaatattcacaacattactcatatttcacacattatgttgtaacaaaaaccggttagatg |
319 |
Q |
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||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10382445 |
tctatctaatgagtgttcgaaagagtgttatatttagtccgagtattcacaacattactcatatttcacacattatgttgtaacaaaaaccggttagatg |
10382346 |
T |
|
| Q |
320 |
tttaaatctaactcttgtctatag--aagaaaggttgtgtaggtgtttgaatataat----atactttattttataagttatattccaagtttagtgcaa |
413 |
Q |
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|||||||||||||||||||||||| || |||||||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||||| |
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| T |
10382345 |
tttaaatctaactcttgtctatagaaaaaaaaggttgtgtaggtgtttgaatataatagagatgctttactttataagttatattccaagtttagtgcaa |
10382246 |
T |
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| Q |
414 |
gtagtagatgcctatg |
429 |
Q |
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|||||||||||||||| |
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| T |
10382245 |
gtagtagatgcctatg |
10382230 |
T |
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