View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14649_low_33 (Length: 337)
Name: NF14649_low_33
Description: NF14649
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14649_low_33 |
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Alignment Details
Target: chr4 (Bit Score: 286; Significance: 1e-160; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 19 - 316
Target Start/End: Original strand, 31572776 - 31573073
Alignment:
| Q |
19 |
caagatctataggaagcagtgagtttcttaatccaataactcatgaagttattttgagtaactcaaggtgtgagttaaaaatcactggttttcaagaagg |
118 |
Q |
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| T |
31572776 |
caagatctataggaagcagtgagtttcttaatccaataactcatgaagttattttgagtaactcaaggtgtgagttaaaaatcactggttttcaagaagg |
31572875 |
T |
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| Q |
119 |
gattaacaatggtggtaataatgctagtggtggtagtagtagtggtggttcttcaacttatgttggtactttaagacctggtacacctggtcctggagga |
218 |
Q |
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| T |
31572876 |
gattaacggtggtggtaataatgctagtggtggtagtagtagtggtggttcttcaacttatgttggtactttaagacctggtacacctggtcctggagga |
31572975 |
T |
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| Q |
219 |
caccctacaatgcattactttaacccttcttttaggacttcttcaactcctccaaggaaatctccttttcttttgtcagaagggtctaatggttttca |
316 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31572976 |
caccctacaatgcattactttaacccttcttttagaacttcttcaactcctccaaggaaatctccttttcttttgtcagaagggtctaatggttttca |
31573073 |
T |
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