View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14649_low_51 (Length: 249)
Name: NF14649_low_51
Description: NF14649
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14649_low_51 |
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Alignment Details
Target: chr3 (Bit Score: 90; Significance: 1e-43; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 143 - 243
Target Start/End: Original strand, 21804343 - 21804441
Alignment:
| Q |
143 |
ataaattattattatataattgtacatcacactttctataaaaacaatagcaagtagaacaaagattaatttattttcatcacttatgaaaaaatctaaa |
242 |
Q |
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| T |
21804343 |
ataaattattattatataattgtacatcacactttctataaa--caatagcaagtagaacaaagattaatttattttcatcacttatgaaaaaatctaaa |
21804440 |
T |
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Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 21804196 - 21804236
Alignment:
| Q |
1 |
tttggtcatctagtgttgaatctacaataaattaaacaatt |
41 |
Q |
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| T |
21804196 |
tttggtcatctagtgttgaatctacaataaattaaacaatt |
21804236 |
T |
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