View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1464_high_8 (Length: 445)
Name: NF1464_high_8
Description: NF1464
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1464_high_8 |
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Alignment Details
Target: chr4 (Bit Score: 282; Significance: 1e-158; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 66 - 429
Target Start/End: Complemental strand, 36710871 - 36710503
Alignment:
| Q |
66 |
gtctataaaaaggaaggagttagggttggttggtgaaagcgaaggagtggacctaaattgatgaagactaaggacttccgactaagaat----aaattga |
161 |
Q |
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| T |
36710871 |
gtctaaaaaaaggaaggagttagggttggttggtgaaagcgaaggagtggacctaaattgatgaagactaaggacttccgactaagaatgaataaattga |
36710772 |
T |
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| Q |
162 |
tgaagactaagggggcagcgagcaaaaacaatgttggttcatgctactcatgcctatgaatgtggtctccacttgtttttgccccatctaatctataagc |
261 |
Q |
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| T |
36710771 |
tgaagactaagggggcagcgagaaaaaacaatgttggttcatgctactcatgcctatgaatgtggtctccacttgtttttgccccatctaatctataagc |
36710672 |
T |
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| Q |
262 |
tatatagatagttggaatctttcttaaaata-aaaagatagttgggatctttggtggctgactaatttggtggtgttaccgtttgaagtggttgtgattg |
360 |
Q |
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| T |
36710671 |
tatatagatagttgggatctttcttaaaataaaaaagatagttgggatctttggtggctgactggtttggtggtgttaccgtttgaagtggttgtgattg |
36710572 |
T |
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| Q |
361 |
gcagnnnnnnnnnnnnnngttggtgctcttttaatccaaaagttgaaatttgatcctctcacgctcaca |
429 |
Q |
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| T |
36710571 |
gcagtttttttagtttttgttggtgctcttttaatccaaaagttgaaatttgatcctctcacgctcaca |
36710503 |
T |
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