View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1464_low_26 (Length: 268)
Name: NF1464_low_26
Description: NF1464
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1464_low_26 |
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Alignment Details
Target: chr1 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 3 - 252
Target Start/End: Original strand, 23522281 - 23522530
Alignment:
| Q |
3 |
tgggtagataatactattgagtttatagaaatggatgtgaatgaatggatccaaaaataagtgaaagggaggtggtactttgagaaggcaaaggcagtct |
102 |
Q |
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|||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23522281 |
tgggtatatactactatagagtttatagaaatggatgtgaatgaatggatccaaaaataagtgaaagggaggtggtactttgagaaggcaaaggcagtct |
23522380 |
T |
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| Q |
103 |
tgtggcgattgtcaggcaattcactctgagatggatcagacccaattgtccatccatagatgtaatgtaagagtccccaccttttccttcccctctctgt |
202 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23522381 |
tgtggcgattgtcaggcaattcactctgagatggatcagacccaattgtccatccatagatgtaatgtaagagtccccaccttttccttcccctctctgt |
23522480 |
T |
|
| Q |
203 |
tttataggtcccaccacaccttctccattcatcttcctctttcaccactt |
252 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23522481 |
tttataggtcccaccacaccttctccattcatcttcctctttcaccactt |
23522530 |
T |
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