View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1464_low_35 (Length: 232)
Name: NF1464_low_35
Description: NF1464
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1464_low_35 |
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Alignment Details
Target: chr1 (Bit Score: 182; Significance: 2e-98; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 23523038 - 23522857
Alignment:
| Q |
1 |
atgctgttgttgatgatgatgatggtagagatgtggatcagagaaagtagtagcatgtaccatagttgattgaaggtgttgtcgttttgcgtgttgacgt |
100 |
Q |
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| T |
23523038 |
atgctgttgttgatgatgatgatggtagagatgtggatcagagaaagtagtagcatgtaccatagttgattgaaggtgttgtcgttttgcgtgttgacgt |
23522939 |
T |
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| Q |
101 |
tctcttttgtgtgcgttttgatgaccacctaaggcttgtgaagtaggaaagtttctacaacagtaatgacattcaaatcttc |
182 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23522938 |
tctcttttgtgtgcgttttgatgaccacctaaggcttgtgaagtaggaaagtttctacaacagtaatgacattcaaatcttc |
23522857 |
T |
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